Metagenome Family F050849

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050849
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	59 residues
Representative Sequence	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQ
Number of Associated Samples	74
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.04 %
% of genes near scaffold ends (potentially truncated)	27.08 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.417 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (40.972 % of family members)
Environment Ontology (ENVO)	Unclassified (40.972 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (51.389 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.42% β-sheet: 0.00% Coil/Unstructured: 44.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF05136	Phage_portal_2	8.33
PF05876	GpA_ATPase	3.47
PF01832	Glucosaminidase	2.78
PF13379	NMT1_2	2.08
PF00176	SNF2-rel_dom	2.08
PF12705	PDDEXK_1	1.39
PF10065	DUF2303	1.39
PF01327	Pep_deformylase	1.39
PF00300	His_Phos_1	0.69
PF05037	DUF669	0.69
PF07690	MFS_1	0.69
PF13550	Phage-tail_3	0.69
PF00589	Phage_integrase	0.69
PF09374	PG_binding_3	0.69
PF00271	Helicase_C	0.69
PF11154	DUF2934	0.69
PF13565	HTH_32	0.69
PF00027	cNMP_binding	0.69
PF16576	HlyD_D23	0.69
PF04542	Sigma70_r2	0.69
PF13472	Lipase_GDSL_2	0.69
PF00702	Hydrolase	0.69
PF01555	N6_N4_Mtase	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG5511	Phage capsid protein	Mobilome: prophages, transposons [X]	8.33
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	3.47
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	1.39
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.69
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.69
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.69
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.69
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.69
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.69
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.69

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
All Organisms	root	All Organisms	39.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
cellular organisms	root	All Organisms → cellular organisms	38.89 %
Viruses	superkingdom	All Organisms → Viruses	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.89 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.69 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.47 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.78 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.69 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.08 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.69 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.69 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.39 %
uncultured Mediterranean phage uvDeep-CGR2-KM19-C37	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM19-C37	0.69 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.69 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.69 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.39 %
uncultured Mediterranean phage uvDeep-CGR2-KM19-C37	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM19-C37	0.69 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.69 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.69 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.42 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1.39 %
uncultured Mediterranean phage uvDeep-CGR2-KM19-C37	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM19-C37	0.69 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.69 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.69 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.69 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101679094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1952	Open in IMG/M
3300004152\|Ga0062386_100710616	Not Available	825	Open in IMG/M
3300004152\|Ga0062386_101386500	Not Available	585	Open in IMG/M
3300005529\|Ga0070741_10191287	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300005531\|Ga0070738_10011214	All Organisms → cellular organisms → Bacteria	7932	Open in IMG/M
3300005531\|Ga0070738_10020792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4998	Open in IMG/M
3300005532\|Ga0070739_10405558	Not Available	632	Open in IMG/M
3300005591\|Ga0070761_10088392	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300009503\|Ga0123519_10517122	Not Available	652	Open in IMG/M
3300009623\|Ga0116133_1014094	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300009665\|Ga0116135_1005519	All Organisms → cellular organisms → Bacteria	4929	Open in IMG/M
3300009839\|Ga0116223_10229220	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300010339\|Ga0074046_10680383	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300010379\|Ga0136449_100057627	All Organisms → cellular organisms → Bacteria	8587	Open in IMG/M
3300010379\|Ga0136449_101708937	Not Available	948	Open in IMG/M
3300010398\|Ga0126383_11120340	Not Available	876	Open in IMG/M
3300014160\|Ga0181517_10050320	Not Available	2572	Open in IMG/M
3300014160\|Ga0181517_10082415	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300014160\|Ga0181517_10245962	Not Available	958	Open in IMG/M
3300014164\|Ga0181532_10166512	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300014169\|Ga0181531_10002229	All Organisms → cellular organisms → Bacteria	12143	Open in IMG/M
3300014169\|Ga0181531_10677555	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300014199\|Ga0181535_10159554	Not Available	1408	Open in IMG/M
3300014199\|Ga0181535_10227445	All Organisms → cellular organisms → Bacteria → Proteobacteria	1134	Open in IMG/M
3300014199\|Ga0181535_10336849	Not Available	893	Open in IMG/M
3300014200\|Ga0181526_10571362	Not Available	715	Open in IMG/M
3300014491\|Ga0182014_10003912	Not Available	17561	Open in IMG/M
3300014492\|Ga0182013_10532060	Not Available	607	Open in IMG/M
3300014493\|Ga0182016_10232444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1167	Open in IMG/M
3300014502\|Ga0182021_10926033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1048	Open in IMG/M
3300014657\|Ga0181522_10015256	Not Available	4144	Open in IMG/M
3300014657\|Ga0181522_10690026	Not Available	623	Open in IMG/M
3300014658\|Ga0181519_10444806	Not Available	799	Open in IMG/M
3300016371\|Ga0182034_10900829	Not Available	761	Open in IMG/M
3300017822\|Ga0187802_10105906	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300017935\|Ga0187848_10259381	Not Available	732	Open in IMG/M
3300017935\|Ga0187848_10468267	Not Available	516	Open in IMG/M
3300017946\|Ga0187879_10510595	Not Available	667	Open in IMG/M
3300017946\|Ga0187879_10722635	Not Available	555	Open in IMG/M
3300017955\|Ga0187817_11057307	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300017959\|Ga0187779_10884146	Not Available	614	Open in IMG/M
3300017970\|Ga0187783_10204200	Not Available	1451	Open in IMG/M
3300017972\|Ga0187781_10420449	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300017972\|Ga0187781_10487190	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300017988\|Ga0181520_10802348	Not Available	635	Open in IMG/M
3300018007\|Ga0187805_10526547	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300018030\|Ga0187869_10076856	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300018034\|Ga0187863_10091315	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300018035\|Ga0187875_10668130	Not Available	546	Open in IMG/M
3300018044\|Ga0187890_10358398	Not Available	818	Open in IMG/M
3300018062\|Ga0187784_10370076	Not Available	1160	Open in IMG/M
3300018062\|Ga0187784_10682042	Not Available	823	Open in IMG/M
3300018062\|Ga0187784_10745463	Not Available	783	Open in IMG/M
3300018062\|Ga0187784_11622959	Not Available	512	Open in IMG/M
3300018089\|Ga0187774_11158349	Not Available	551	Open in IMG/M
3300025434\|Ga0208690_1011965	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300027706\|Ga0209581_1000114	All Organisms → cellular organisms → Bacteria	259866	Open in IMG/M
3300027706\|Ga0209581_1000116	All Organisms → cellular organisms → Bacteria	257580	Open in IMG/M
3300027706\|Ga0209581_1000280	All Organisms → cellular organisms → Bacteria	139539	Open in IMG/M
3300027706\|Ga0209581_1000806	All Organisms → cellular organisms → Bacteria	47349	Open in IMG/M
3300027854\|Ga0209517_10044113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	3468	Open in IMG/M
3300027905\|Ga0209415_11115258	Not Available	512	Open in IMG/M
3300029903\|Ga0247271_123196	Not Available	696	Open in IMG/M
3300030688\|Ga0311345_10886264	Not Available	686	Open in IMG/M
3300031234\|Ga0302325_13106680	Not Available	533	Open in IMG/M
3300031261\|Ga0302140_10662895	Not Available	770	Open in IMG/M
3300031463\|Ga0272448_1001762	All Organisms → cellular organisms → Bacteria	28482	Open in IMG/M
3300031788\|Ga0302319_10335129	All Organisms → cellular organisms → Bacteria → Proteobacteria	1741	Open in IMG/M
3300031788\|Ga0302319_10429275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1456	Open in IMG/M
3300031910\|Ga0306923_11188720	Not Available	816	Open in IMG/M
3300031954\|Ga0306926_10917391	Not Available	1048	Open in IMG/M
3300032076\|Ga0306924_11383973	Not Available	752	Open in IMG/M
3300032160\|Ga0311301_10100790	All Organisms → cellular organisms → Bacteria	5649	Open in IMG/M
3300032160\|Ga0311301_11461400	Not Available	846	Open in IMG/M
3300032160\|Ga0311301_11658697	Not Available	773	Open in IMG/M
3300032770\|Ga0335085_10219166	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300032770\|Ga0335085_10230812	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300032770\|Ga0335085_10321763	Not Available	1824	Open in IMG/M
3300032770\|Ga0335085_10483228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1417	Open in IMG/M
3300032770\|Ga0335085_10611719	Not Available	1225	Open in IMG/M
3300032770\|Ga0335085_11239643	Not Available	791	Open in IMG/M
3300032770\|Ga0335085_11883348	Not Available	610	Open in IMG/M
3300032770\|Ga0335085_12047399	Not Available	580	Open in IMG/M
3300032782\|Ga0335082_10859408	Not Available	770	Open in IMG/M
3300032783\|Ga0335079_10158496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2535	Open in IMG/M
3300032783\|Ga0335079_10179032	All Organisms → cellular organisms → Bacteria	2363	Open in IMG/M
3300032783\|Ga0335079_10394300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1494	Open in IMG/M
3300032783\|Ga0335079_10502365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1293	Open in IMG/M
3300032783\|Ga0335079_10600001	All Organisms → cellular organisms → Bacteria → Acidobacteria	1162	Open in IMG/M
3300032783\|Ga0335079_10656751	Not Available	1100	Open in IMG/M
3300032783\|Ga0335079_10681838	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM19-C37	1076	Open in IMG/M
3300032783\|Ga0335079_11721996	Not Available	612	Open in IMG/M
3300032783\|Ga0335079_11875625	Not Available	581	Open in IMG/M
3300032783\|Ga0335079_11996873	Not Available	559	Open in IMG/M
3300032783\|Ga0335079_12037761	Not Available	552	Open in IMG/M
3300032805\|Ga0335078_10270956	Not Available	2302	Open in IMG/M
3300032805\|Ga0335078_10375222	Not Available	1878	Open in IMG/M
3300032805\|Ga0335078_10606037	Not Available	1380	Open in IMG/M
3300032805\|Ga0335078_10993624	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300032805\|Ga0335078_11095390	Not Available	932	Open in IMG/M
3300032805\|Ga0335078_11257287	Not Available	849	Open in IMG/M
3300032805\|Ga0335078_11289710	Not Available	835	Open in IMG/M
3300032805\|Ga0335078_11684306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	697	Open in IMG/M
3300032805\|Ga0335078_11767235	Not Available	674	Open in IMG/M
3300032805\|Ga0335078_12344173	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300032805\|Ga0335078_12715892	Not Available	504	Open in IMG/M
3300032828\|Ga0335080_10506718	Not Available	1281	Open in IMG/M
3300032828\|Ga0335080_11596497	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300032828\|Ga0335080_11771998	Not Available	604	Open in IMG/M
3300032829\|Ga0335070_10627206	Not Available	1010	Open in IMG/M
3300032829\|Ga0335070_10748886	Not Available	911	Open in IMG/M
3300032829\|Ga0335070_11841592	Not Available	547	Open in IMG/M
3300032892\|Ga0335081_10814610	Not Available	1114	Open in IMG/M
3300032892\|Ga0335081_11925736	Not Available	634	Open in IMG/M
3300032892\|Ga0335081_12275013	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300032892\|Ga0335081_12461910	Not Available	539	Open in IMG/M
3300032893\|Ga0335069_10009650	All Organisms → cellular organisms → Bacteria	13721	Open in IMG/M
3300032893\|Ga0335069_11406133	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300032893\|Ga0335069_11693519	Not Available	675	Open in IMG/M
3300032893\|Ga0335069_12072365	Not Available	598	Open in IMG/M
3300032893\|Ga0335069_12527731	Not Available	531	Open in IMG/M
3300032895\|Ga0335074_11169638	Not Available	653	Open in IMG/M
3300032897\|Ga0335071_10211997	Not Available	1891	Open in IMG/M
3300032897\|Ga0335071_10968411	Not Available	798	Open in IMG/M
3300032898\|Ga0335072_11262431	Not Available	651	Open in IMG/M
3300032898\|Ga0335072_11264574	Not Available	650	Open in IMG/M
3300032954\|Ga0335083_11390885	Not Available	537	Open in IMG/M
3300032955\|Ga0335076_10498106	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300032955\|Ga0335076_10958292	Not Available	738	Open in IMG/M
3300033134\|Ga0335073_11231487	Not Available	748	Open in IMG/M
3300033158\|Ga0335077_10818110	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	947	Open in IMG/M
3300033158\|Ga0335077_11548449	Not Available	633	Open in IMG/M
3300033158\|Ga0335077_11668553	Not Available	604	Open in IMG/M
3300033289\|Ga0310914_11225646	Not Available	652	Open in IMG/M
3300033402\|Ga0326728_10018192	All Organisms → cellular organisms → Bacteria	13903	Open in IMG/M
3300033402\|Ga0326728_10098168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3564	Open in IMG/M
3300033402\|Ga0326728_10390691	Not Available	1196	Open in IMG/M
3300033405\|Ga0326727_10937889	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300033405\|Ga0326727_11136204	Not Available	552	Open in IMG/M
3300033405\|Ga0326727_11197840	Not Available	529	Open in IMG/M
3300033817\|Ga0373875_000785	All Organisms → cellular organisms → Bacteria	23335	Open in IMG/M
3300034091\|Ga0326724_0503554	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.31%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.69%
Aquatic	Environmental → Aquatic	23.61%
Bioremediation	Engineered → Bioremediation	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.36%
Freshwater	Environmental → Aquatic → Freshwater	21.53%
Peat	Environmental → Terrestrial → Peat	8.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.39%
Marine	Environmental → Aquatic → Marine	0.69%
Persistent Organic Pollutants (Pop)	Engineered → Bioremediation → Persistent Organic Pollutants (Pop)	0.69%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	50.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.33%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.39%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%
Loam	Environmental → Terrestrial → Soil → Loam	0.69%
Unclassified	Engineered → Bioremediation → Persistent Organic Pollutants (Pop) → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	47.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.08%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.08%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.69%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.69%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Unclassified	Engineered → Bioremediation → Persistent Organic Pollutants (Pop) → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	40.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.56%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.08%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.39%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.69%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	0.69%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.69%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.69%
Anaerobic Enrichment Culture	Engineered → Bioremediation → Persistent Organic Pollutants (Pop) → Unclassified → Unclassified → Anaerobic Enrichment Culture	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300009503	Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031463	Hot spring sediment microbial communities from Yellowstone National Park, WY, United States - YNP-CB-019-1	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033817	Laboratory-enriched microbial communities from a contaminated site in Ontario, Canada - KB1_TCB MSP	Engineered	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1016790941	3300001213	Wetland	MQIRAEFLEREAGHVVVCLILIVLGAGLWMLKVPKGEDLIPFALGVLGRSMIGRKPNPEDTAK*
Ga0062386_1007106162	3300004152	Bog Forest Soil	MPRIAEFLEREAGHVVVSLILIAFGAVLWLLKVPKGEDLIPFALGVLARSMIGNQSAPPQ
Ga0062386_1013865002	3300004152	Bog Forest Soil	MLGIAEYFTLLEREAGHVVVSLILIVLGAALVLLKVPKGEDLIPFALGVLARSMIGKQSGV*
Ga0070741_101912875	3300005529	Surface Soil	MSAQFWEREAGHIVVSLILIALGAALWLLKVPKGEDLIPFATGVLARSMIGKQGTA*
Ga0070738_100112147	3300005531	Surface Soil	MPIRADYFEREAGHIVVCLILIAMGAGLWLLKVPKGEDLIPFALGVLGRSMVGRKNAPEDNK*
Ga0070738_100207929	3300005531	Surface Soil	MRVCEFIEREAGHVTVSLVLIALGAVLWLLKVPKGEDLIPFALGVLGRSMIGKPNEPSR*
Ga0070739_104055582	3300005532	Surface Soil	MQIRADFLEREAGHIVVCLILIVIGAGLWVLKVPKADDLIPFALGILGRSMIGRKPTPEDTTK*
Ga0070761_100883922	3300005591	Soil	MDRFATLIEREAGHVVVSLLLIAFGAGLWMLKVPKAEDLIPFALSVLGRSMVGKPGSPL*
Ga0123519_105171222	3300009503	Hot Spring	MDGLIRFLEREAGHVVVSLILIAMGAALCLLKVPKAEDLIPFALGVLARSMIGKAGGNP*
Ga0116133_10140943	3300009623	Peatland	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGSTQNQP*
Ga0116135_10055196	3300009665	Peatland	EAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGSTQNQP*
Ga0116223_102292202	3300009839	Peatlands Soil	MPRIAEFLEREAGHVVVSLILIAVGAGLWIWRVPKGEDLIPFAMGVLGRSMIGKQGNQP*
Ga0074046_106803833	3300010339	Bog Forest Soil	EREAGHIVVSLILIVLGAALWLLKVPKGEDLIPFATGVLARSMIGKQNGV*
Ga0136449_1000576277	3300010379	Peatlands Soil	VQKIATILEREAGHVVVSLLLIAVGAGLWMLKVPKGEDLIPFALGVLGRSMIGKQSGV*
Ga0136449_1017089371	3300010379	Peatlands Soil	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQPSSQ*
Ga0126383_111203402	3300010398	Tropical Forest Soil	RFAEFVEREAGHLILGLVLIAIGAALVKAQIPKGEDLIPFALGILGRSMIGAVSERDS*
Ga0181517_100503204	3300014160	Bog	MQISAFLEREAGHVVISLTLIAVGAILWKVGVPKGEDLIPFALGVLGRSMIGKQVNQP*
Ga0181517_100824153	3300014160	Bog	REAGHVVVSLILIAFGAVLWLLKVPKGEDLIPFALGVLARSMIGNQSTPPQ*
Ga0181517_102459621	3300014160	Bog	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQTSSQ*
Ga0181532_101665123	3300014164	Bog	MAELLEREAGHVAVSLILIAFGAALWLLKVPKGEDLIPFALGVLGRSMIGKQSGV*
Ga0181531_100022291	3300014169	Bog	LEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGSTQNQP*
Ga0181531_106775552	3300014169	Bog	MDRFATLVEREAGHVVVSLLLIAIGAGLWILKVPKGEDLIPFALGVLGRSMVGKQGGV*
Ga0181531_108121191	3300014169	Bog	AGHVVVSLLLIALGAGLWMLKVPKGEDVIPFALGVLGRSMIGKQNNQP*
Ga0181535_101595542	3300014199	Bog	VQRIAEFLEREAGHVVVSLVLIALGAGLWTLKVPKGEDLIPFALGVLGRSMIGSERNQR*
Ga0181535_102274452	3300014199	Bog	MQGLCASLEREAGHVAVSLVLIVLGAAFWLLKVPKGEDLIPFALGVLGRSMIGKPNEPSR
Ga0181535_103368491	3300014199	Bog	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKAEDLIPFALGVLGRSMIGKQSNQP*
Ga0181526_105713622	3300014200	Bog	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQSSSQQ
Ga0182014_100039128	3300014491	Bog	MPKIADLEREAGHIVVSLILIVLGAALWLLKVPKGEDLIPFATGVLARSMIGKQNGV*
Ga0182013_105320602	3300014492	Bog	MDRFAALVEREAGHVVVSLLLIAFGAGLWILRVPKGEDLIPFALGVLGRSMIGKQGNQP*
Ga0182016_102324443	3300014493	Bog	MQRVAELLEREAGHVVVSLILIACGAALWACKVPKGEDLIPFALGVLGRSMIGRRENQP*
Ga0182021_109260332	3300014502	Fen	MPQKIADLVEREAGHVMVSFVLIALGAGLWMLRVPKGEDLIPFALGVLGRSMIGKLADQPKG*
Ga0181522_100152565	3300014657	Bog	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARS
Ga0181522_106900262	3300014657	Bog	AGFIEREAGHVVISLVLICMGAALWSLKVPKAEDLIPFATGVLARSMIGRQYKPQQ*
Ga0181519_104448061	3300014658	Bog	MDRFATLVEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLGRSMIGKQSNQP*
Ga0182034_109008292	3300016371	Soil	MGAFAEFIEREAGHVLVGLLLIGVGAALWKFQVPKGEDLVPFALGVIARSMVGDKTTSK
Ga0187802_101059061	3300017822	Freshwater Sediment	MKTAEFVEREAGHVVVSLILIAIGAALWVLKVPKGEDLIPFALGVLGRSMIGKQSQP
Ga0187848_102593811	3300017935	Peatland	PIAGFIEREAGHVVISLVLICMGAALWSLKVPKAEDLIPFATGVLARSMIGRQYKPQQ
Ga0187848_104682671	3300017935	Peatland	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGSTQNQP
Ga0187879_105105952	3300017946	Peatland	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQTSSQ
Ga0187879_107226352	3300017946	Peatland	MRICDFMEREAGHVVVSLALIAFGAVLWLLKVPKGEDLIPFALGVLGRSMI
Ga0187817_110573071	3300017955	Freshwater Sediment	PPRRRSMRICDFMEREAGHVVVSLALIAFGAVLWLLKVPKGEDLIPSALGVLGRSMIGKEADQRKV
Ga0187779_108841462	3300017959	Tropical Peatland	MDSNLKLAIPFADLLEREAGHIVVSLALIALGAALWYFHVPKGEDLIPFATGVLARSMVGKQNGV
Ga0187783_102042002	3300017970	Tropical Peatland	MLERLASCVEREAGHVVVSLLLIAIGAGLYFLKVPKGEDLIPFALGVLGRSMLGKPVDPH
Ga0187781_104204491	3300017972	Tropical Peatland	MLQQIATFVEREAGHVVVSLLLIAIGAGLYFLKVPKGEDLIPFALGVLGRSMIGKQVGSA
Ga0187781_104871902	3300017972	Tropical Peatland	MLQQTASFLEREAGHVVVSLLLIAIGAGLYFLKVPKGEDLIPFALGVLGRSMLGKQGGV
Ga0181520_108023481	3300017988	Bog	MDRFATLIEREAGHVVVSLLLIAFGAGLWMLKVPKAEDLIPFALSVLGRSMVGKPGSPL
Ga0187805_105265472	3300018007	Freshwater Sediment	FPPLYPLRRRDMQHSCDLVEREAGHVLVSLVLIALGAALWLLQVPKGEDLIPFALGVLGRSMIGKPNEPSR
Ga0187869_100768561	3300018030	Peatland	FATLIEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGSTQNQP
Ga0187863_100913151	3300018034	Peatland	IAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQTSSQ
Ga0187875_106681301	3300018035	Peatland	LEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQTSSQ
Ga0187890_103583982	3300018044	Peatland	MDRFATLVEREAGHVVVSLLLIAFGAGLWVLKVPKSEDLIPFALGVLGRSMIGKQNN
Ga0187784_103700762	3300018062	Tropical Peatland	MLQQIATFVEREAGHVVVSLLLIAIGAGLYFLKVPKAEDLIPFALGVLGRSMIGKQVGSA
Ga0187784_106820421	3300018062	Tropical Peatland	MSADIPGSIAGLVEREAGHVLVSLILIGLGAGLCLLHVPKGEDLIPFALGVLGRSMIGKQ
Ga0187784_107454632	3300018062	Tropical Peatland	MLQRIAEFAEREAGHVVVSLLLIAIGALLYFLKVPKGEDLIPFALGVLGRSMLGKQGGV
Ga0187784_116229592	3300018062	Tropical Peatland	MKTAEFIEREAGHVVVCLVLIVIGSLLWKCGVPKAEDILPFALGALARSMVGGKKDSAGKADVSA
Ga0187774_111583492	3300018089	Tropical Peatland	MQRLCEAMEREAGHVLVSLILIALGAALWFLKVPKGEDLIPFALGVLGRSMVGKLNESSR
Ga0208690_10119651	3300025434	Peatland	MDRFSTLIEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGSTQNQP
Ga0209581_1000114132	3300027706	Surface Soil	MSIRADFLEREAGHVVVCLILIAMGAGLWVLHVPKGEDLIPFALGVLGRSMVGRRPEEPP
Ga0209581_1000116165	3300027706	Surface Soil	MQRVVELVEREAGHVLVSLVLIILGALLWLLKVPKGEDLIPFALGVLGRSMVGKSNESSR
Ga0209581_100028045	3300027706	Surface Soil	MPIRADYFEREAGHIVVCLILIAMGAGLWLLKVPKGEDLIPFALGVLGRSMVGRKNAPEDNK
Ga0209581_100080621	3300027706	Surface Soil	MRVCEFIEREAGHVTVSLVLIALGAVLWLLKVPKGEDLIPFALGVLGRSMIGKPNEPSR
Ga0209517_100441131	3300027854	Peatlands Soil	MPRIAEFLEREAGHVVVSLILIAVGAGLWIWRVPKGEDLIPFAMGVLGRSMIGKQGNQP
Ga0209415_111152582	3300027905	Peatlands Soil	QKIATILEREAGHVVVSLLLIAVGAGLWMLKVPKGEDLIPFALGVLGRSMIGKQSGV
Ga0247271_1231963	3300029903	Soil	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQTS
Ga0311345_108862642	3300030688	Bog	MDRFAALVEREAGHVVVSLLLIAFGAGLWILRVPKGEDLIPFALGVLGRSMIGKQGNQ
Ga0302325_131066801	3300031234	Palsa	VTMDRFATLVEREAGHVVVSLLLIAFGAGLWVLKVPKSEDLIPFALGVLGRSMIGKQNN
Ga0302140_106628951	3300031261	Bog	MDRFAALVEREAGHVVVSLLLIAFGAGLWILRVPKGEDLIPFALGVLGRSMIGKQGNQP
Ga0272448_10017622	3300031463	Sediment	MQGLIGLIEREAGHVVVSLVLIVLGATLWLLKVPKGEDLIPFALGVLGRSMIGKPNEPSR
Ga0302319_103351293	3300031788	Bog	MDRFAALVEREAGHVVVSLLLIAFGAGLWILRVPKGEDLIPFALGVLGRSMIGKQS
Ga0302319_104292751	3300031788	Bog	ALVEREAGHVVVSLLLIAFGAGLWILRVPKGEDLIPFALGVLGRSMIGKQGNQP
Ga0306923_111887202	3300031910	Soil	MIGQVAEFLEREAGHVLVGLALIGIGALLWKCQVPKAEDLVPFALGVIARSMVGDKTTDK
Ga0306926_109173913	3300031954	Soil	ALAEFIEREAGHVLVGLLLIGVGAALWKFQVPKGEDLVPFALGVIARSMVGDKTTSK
Ga0306924_113839732	3300032076	Soil	MAAFAEFIEREAGHVLVGLVLIGVGALLWHFQVPKGDDILPFALGVIARSMV
Ga0311301_101007906	3300032160	Peatlands Soil	VQKIATILEREAGHVVVSLLLIAVGAGLWMLKVPKGEDLIPFALGVLGRSMIGKQSGV
Ga0311301_114614002	3300032160	Peatlands Soil	VQRIAEFLEREAGHVVVSLLLIALGAGLWTLKVPKGEDLIPFALGVLARSMIGKQ
Ga0311301_116586971	3300032160	Peatlands Soil	MQIRAEFLEREAGHVAVCLILIALGAGLWMLKVPKGEDLIPFALGVLGRSMIGRKP
Ga0335085_102191663	3300032770	Soil	MQPVKQFLECEAGHIVVSLLVIAMGAGLWLLHVPKGEDLIPFALGVLARSMIGKQSGV
Ga0335085_102308126	3300032770	Soil	MQRLCEAMEREAGHVLVSLILIAMGAALWFLKVPKGEDLIPFALGVLGRSMVGKLNESSR
Ga0335085_103217631	3300032770	Soil	MQIRADFLEREAGHVVVCLILIVMGAGLWMIKVPKGEDLIPFALAVLGRSMIGKQGQSPPSPGASS
Ga0335085_104832282	3300032770	Soil	RLCEAMEREAGHVLVSLILIALGAALWFLKVPKGEDLIPFALGVLGRSMVGKPNESSR
Ga0335085_106117192	3300032770	Soil	MNLAAFLEREAGHVVVSLILIAVGAGLWLLEVPKGEDLIPFALGVLARSMIGSKAASSPP
Ga0335085_112396431	3300032770	Soil	MQTLASFIEREAGHVVVSLVLIALGAVLWLLKVPKAEDLIPFATGVLARSMVGK
Ga0335085_118833482	3300032770	Soil	MQKLVDALEREAGHVVVSLVLIALGAALWLLKIPKGEDLIPFATGVLARSMIG
Ga0335085_120473992	3300032770	Soil	MSIRADFLEREAGHVVVCLILIVMGAGLWMFKVPKGEDLIPFALGVLGRSMIGRKPTPEDTAK
Ga0335082_108594082	3300032782	Soil	VNAMQIRADFLEREAGHVVVSLILVAMGAGLWMLKVPKGEDLIPFALGVLGRSMIGRKPGEDDK
Ga0335079_101584966	3300032783	Soil	MPQISGQISGFVEREAGHVVVSLVLIVLGAGLWLLRVPKGEDLIPFALGVLGRSMIGKQQ
Ga0335079_101790326	3300032783	Soil	MQHFCDLIEREAGHVLVSLVLIALGAALWLLRVPKGEDLIPFALGVLGRSMIGKPNEPSR
Ga0335079_103943002	3300032783	Soil	MRAADFIEREAGHILVSLVLIALGAGLWLLKVPKGEDLIPFALGVLARSMIGKQSAV
Ga0335079_105023654	3300032783	Soil	MRICDFMEREAGHVVVSLALIAFGAVLWLLKVPKGEDLIPFALGVLGRSMIGKEADQRKV
Ga0335079_106000013	3300032783	Soil	MSAQFWEREAGHIVVSLILIALGAVLWLLKVPKGEDLIPFATGVLARSMIGKQGTA
Ga0335079_106567511	3300032783	Soil	MPQISEQISGFVEREAGHVVVSLSLIVLGAGLWLLRVPKGEDLIPFALGVLGRSMIGKQQ
Ga0335079_106818383	3300032783	Soil	MPKIADAIEREAGHVVVSLVLIALGAALWLLKVPKGEDLIPFATGVLARSMIGKQSGA
Ga0335079_117219962	3300032783	Soil	MPQISEEVSGFVEREAGHVVVSLVLIVLGAVLWLLKVPKGEDLIPFALGVLGRSMIGKRQ
Ga0335079_118756252	3300032783	Soil	MERIAAFFEREAGHVVVSLILVITGAVLWKFGVPKGEDLIPFALGVLGRSMIG
Ga0335079_119968732	3300032783	Soil	MQRLCEAMEREAGHVLVSLILIAMGAALWFLKVPKGEDLIPFALGVLGRSMVGKPNESSR
Ga0335079_120377612	3300032783	Soil	MRVCEFIEREAGHVTVSLVLIAFGTVLWLLKVPKGEDLIPFALGVLGRSMIGKPNEPSR
Ga0335078_102709564	3300032805	Soil	MSIRADFLEREAGHVVVCLILIVMGAGLWIFKVPKGEDLIPFALGVLGRSMIGRKPTPEDTAK
Ga0335078_103752226	3300032805	Soil	MPQISEEVSGFVEREAGHVVVSLVLIVLGAVLWLLKVPKGEDLIPFALGVLGRSMIGKK
Ga0335078_106060373	3300032805	Soil	MEDRAEFLEREAGHVVVCLILILMGAGLWMLKVPKGEDLIPFALGVLGRSMIGRKPAPEDNTK
Ga0335078_109936243	3300032805	Soil	MPKIADAIEREAGHVVVSLILIVLGAALWLLKVPKGEDLIPFATGVLARSMIGKQGAA
Ga0335078_110953902	3300032805	Soil	MQRFCDLVEREAGHVLVSLVLIALGAALWLLRVPKGEDLIPFALGVLGRSMIGKPNEPSR
Ga0335078_112572871	3300032805	Soil	MRSADFFEREAGHILVSLVLIALGAGLWLLKVPKGEDLIPFATGVLARSMVGQKANSPPQ
Ga0335078_112897102	3300032805	Soil	MRAADFIEREAGHILVSLVLIAIGAGLWLLKIPKGEDLIPFATGVLARSMVGQKANSPPQ
Ga0335078_116843061	3300032805	Soil	CEAMEREAGHVLVSLILIALGAALWFLKVPKGEDLIPFALGVLGRSMVGKLNESSR
Ga0335078_117672353	3300032805	Soil	MSLASFVEREAGHVVVSLILIVLGAALVLLKVPKGEDLIPFALGVLARSMIGKQSAV
Ga0335078_123441732	3300032805	Soil	MPSISDAMEREAGHVVVSLILIILGAALVLLKVPKGEDLIPFALGVLGRSMIGKQGGV
Ga0335078_127158921	3300032805	Soil	VQIRADFLEREAGHVVVCLILIVMGAGLWMLKVPKGEDLVPFALGVLGRSMVGKQSQSPPSPGAPS
Ga0335080_105067181	3300032828	Soil	SLPFPPLCPPRRRSMRICDFMEREAGHVVVSLALIAFGAVLWLLKVPKGEDLIPFALGVLGRSMIGKEADQRKV
Ga0335080_115964972	3300032828	Soil	MSAQFWEREAGHIVVSLILIALGAALWLLKVPKGEDLIPFATGVLARSMIGKQGTA
Ga0335080_117719981	3300032828	Soil	MFRADFLEREAGHVVVSLILIAIGAGLWMLKVPKGEDLIPFALGVLGRSMIGRKPGGDEK
Ga0335070_106272062	3300032829	Soil	MQRLCEVMEREAGHVLVSLILIAMGAALWFLKVPKGEDLIPFALGVLGRSMVGKLNESSR
Ga0335070_107488862	3300032829	Soil	VQNRAEFLEREAGHVIVCLILIAMGAGLWILRVPKGEDLIPFALGVLGRSMVGRKPTPEDTTK
Ga0335070_118415922	3300032829	Soil	VQRFCDIVEREAGHVLVSLVLIALGAALWLLRVPKGEDLIPFALGVLGRSMIGKQNESAR
Ga0335081_108146102	3300032892	Soil	MSIRADVLEREAGHVVVSLLLIAMGAGLWMLKVPKGEDLIPFALGVLGRSMVGRKPEDPQ
Ga0335081_119257361	3300032892	Soil	MPRTADLEREAGHVLVSLVLIVLGAALWLLQVPKGEDLIPFALGVLGRSMVGKPNESSR
Ga0335081_122750132	3300032892	Soil	MQRLCEAMEREAGHVLVSLILIALGAALWFLKVPKGEDLIPFALGVLGRSMVGKPNESSR
Ga0335081_124619102	3300032892	Soil	MFRADFLEREAGHVVVSLILIAIGAGLWMLKVPKGEDLIPFALGVLGRSMIGRKPTPEDNNK
Ga0335069_100096502	3300032893	Soil	MSIRAEVLEREAGHVVVCLVLIAMGAGLWMLKVPKSEDLIPFALGVLGRSMIGRKPGSEDNAQ
Ga0335069_114061333	3300032893	Soil	MPKIADAIEREAGHVVVSLVLIALGAALWLLKVPKGEDLIPFATGVLARSMIGKQPGV
Ga0335069_116935191	3300032893	Soil	MSIRADFLEREAGHVVVCLILIVMGAGLWMFKVPKGEDLIPFALGVLGRSM
Ga0335069_120723652	3300032893	Soil	MTTRAEILEREAGHIVVCLILIAMGAGLWLLKVPKGEDLIPFALGVLGRSMIGRKPAPEDNDK
Ga0335069_125277312	3300032893	Soil	VAMSIRADFLEREAGHVVVCLILIVMGAGLWMFKVPKGEDLIPFALGVLGRSMIGRKPTPEDTAK
Ga0335074_111696382	3300032895	Soil	MQRFCDLMEREAGHVLVSLVLIALGATLWLLRVPKGEDLIPFALGVLGRSMIGKPNESSR
Ga0335071_102119973	3300032897	Soil	VQNRAEFLEREAGHVIVCLILIAMGAGLWILRVPKGEDLVPFALGVLGRSMIGRKPTPEDTTK
Ga0335071_109684112	3300032897	Soil	MQPVKQFLECEAGHIVVSLLVIAMGASLWLLHVPKGEDLIPFALGVLARSMIGKQSGV
Ga0335072_112624311	3300032898	Soil	PPPKVRWPRLRPSCPRRRRRMPQISEQISGFVEREAGHVVVSLVLIVLGAGLWLLRVPKGEDLIPFALGVLGRSMIGKQQ
Ga0335072_112645741	3300032898	Soil	MRFDITLLEREAGHIVVSLILIVMGAVLWHLKVPKGEDLIPFATGVLARSMIGKQGGGHDQN
Ga0335083_113908852	3300032954	Soil	MQRLCEAMEREAGHVLVSLILIALGAALWFLKVPKGEDLIPFALGVLGRSMVGKPNES
Ga0335076_104981062	3300032955	Soil	MQRLCEAMEREAGHVLVSLILIALGAALWFLKVPKGEDLIPFALGVLGRSMVGKLNEPSR
Ga0335076_109582922	3300032955	Soil	MQIRADFLEREAGHVVVCLILIVMGAGLWMFKVPKGEDLIPFALGVLGRSMIGRKPTPEDTAK
Ga0335073_112314872	3300033134	Soil	MSIRADFLEREAGHVVVCLILIVMGAGLWVLKVPKADDLIPFALGILGRSMIGRKPTPEDTTK
Ga0335077_108181102	3300033158	Soil	MKVSEFLEREAGHIVVSLILIALGASLWLLKVPKGEDLIPFATGVLARSMIGKQVNQP
Ga0335077_115484492	3300033158	Soil	MQDFCDLVEREAGHVLVSLVLIALGAALWLLRVPKGEDLIPFALGVLGRSMIGKPNEPSR
Ga0335077_116685531	3300033158	Soil	MFRADFLEREAGHVVVSLILIAIGAGLWMLKVPKGEDLIPFALGVLGRSMIGRKPAPEEKTK
Ga0335077_118182682	3300033158	Soil	GHVVVSLILVAMGAGLWMLKVPKGEDLIPFALGVLGRSMIGRKPGGDDK
Ga0310914_112256461	3300033289	Soil	MGALAEFIEREAGHVLVGLLLIGVGAALWKFQVPKGEDLVPFALGVIARSMVGDKTTSK
Ga0326728_100181928	3300033402	Peat Soil	MQRIAEFAEREAGHVVVSLILIALGAVLWLFKVPKGEDLIPFALGVLGRSMIGKQSGI
Ga0326728_100981687	3300033402	Peat Soil	MPQKIADLVEREAGHVTVSLILIALGAGLWMLRVPKGEDLIPFALGVLGRSMIGKLADQPKG
Ga0326728_103906913	3300033402	Peat Soil	MKFVDLVEREAGHVVVSLILIAVGAGLWILKVPKGEDLIPFALGVLGRSMIGTKRQGNQP
Ga0326727_109378893	3300033405	Peat Soil	AEREAGHVVVSLILIALGAVLWLFKVPKGEDLIPFALGVLGRSMIGKQSGI
Ga0326727_111362041	3300033405	Peat Soil	AELPLQVAMDRFATLVEREAGHVVVSLLLIAIGAGLWILKVPKGEDLIPFALGVLGRSMIGKQGNQP
Ga0326727_111978401	3300033405	Peat Soil	MDRFATLVEREAGHVVVSLVLVVFGAGLWMLKVPKGEDLVPFALGILGRSMIGSQQKHP
Ga0373875_000785_3824_4009	3300033817	Anaerobic Enrichment Culture	MSIRADFLEREAGHVVVCLILIAMGAGLWLLRVPKGEELIPFALGVLGRSMLGTKPPGNV
Ga0326724_0503554_305_481	3300034091	Peat Soil	MARIAELLEREAGHVAVSLILIAFGAALWLLKVPKGEDLIPFALGVLGRSMIGKQSGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050849

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences