Metagenome / Metatranscriptome Family F050728

Basic Information
Family ID	F050728
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	43 residues
Representative Sequence	QAYYQTEQTDKLHEAEAKLRGTNVPTMEQALVVPAARAKRPNI
Number of Associated Samples	127
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.39 %
% of genes near scaffold ends (potentially truncated)	48.28 %
% of genes from short scaffolds (< 2000 bps)	45.52 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Unclassified (54.483 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.862 % of family members)
Environment Ontology (ENVO)	Unclassified (26.207 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.172 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.66% β-sheet: 0.00% Coil/Unstructured: 56.34%
Feature Viewer

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Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF07238	PilZ	88.28
PF00589	Phage_integrase	1.38
PF02518	HATPase_c	1.38
PF07715	Plug	0.69
PF13181	TPR_8	0.69
PF09411	PagL	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
All Organisms	root	All Organisms	45.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
cellular organisms	root	All Organisms → cellular organisms	45.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	44.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E01CNTIL	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300000789\|JGI1027J11758_12456739	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300001471\|JGI12712J15308_10149779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300002245\|JGIcombinedJ26739_101519793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300004092\|Ga0062389_101989869	Not Available	758	Open in IMG/M
3300004152\|Ga0062386_101519872	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300005176\|Ga0066679_11000459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300005445\|Ga0070708_101361555	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300005541\|Ga0070733_10678180	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300005591\|Ga0070761_10938136	Not Available	548	Open in IMG/M
3300005602\|Ga0070762_10096046	All Organisms → cellular organisms → Bacteria → Acidobacteria	1708	Open in IMG/M
3300005602\|Ga0070762_10484400	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300005764\|Ga0066903_104222481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300006086\|Ga0075019_10085226	All Organisms → cellular organisms → Bacteria → Acidobacteria	1803	Open in IMG/M
3300006162\|Ga0075030_100288259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1313	Open in IMG/M
3300006162\|Ga0075030_101427381	Not Available	542	Open in IMG/M
3300006174\|Ga0075014_100895792	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300006755\|Ga0079222_12183862	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300006797\|Ga0066659_10597618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300009143\|Ga0099792_10083609	All Organisms → cellular organisms → Bacteria → Acidobacteria	1640	Open in IMG/M
3300009792\|Ga0126374_10876607	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300009839\|Ga0116223_10344279	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300010379\|Ga0136449_101641803	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300012096\|Ga0137389_10506920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300012469\|Ga0150984_118459416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300012474\|Ga0157356_1021337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012917\|Ga0137395_10769261	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300012924\|Ga0137413_10188653	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300012924\|Ga0137413_11033077	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300016445\|Ga0182038_10268932	All Organisms → cellular organisms → Bacteria → Acidobacteria	1380	Open in IMG/M
3300017934\|Ga0187803_10141037	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300018012\|Ga0187810_10471318	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300018021\|Ga0187882_1137170	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300018026\|Ga0187857_10473838	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300018042\|Ga0187871_10804979	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300018085\|Ga0187772_11048155	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300018086\|Ga0187769_11411814	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300018090\|Ga0187770_11118326	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300020021\|Ga0193726_1043094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2182	Open in IMG/M
3300020583\|Ga0210401_11018676	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300021405\|Ga0210387_10643359	All Organisms → cellular organisms → Bacteria → Acidobacteria	941	Open in IMG/M
3300021432\|Ga0210384_11682032	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300021861\|Ga0213853_10546266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300022522\|Ga0242659_1048914	Not Available	743	Open in IMG/M
3300022532\|Ga0242655_10004163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2365	Open in IMG/M
3300022722\|Ga0242657_1208218	Not Available	544	Open in IMG/M
3300022730\|Ga0224570_109935	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300022734\|Ga0224571_105075	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300022873\|Ga0224550_1064690	Not Available	526	Open in IMG/M
3300024187\|Ga0247672_1094489	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300025494\|Ga0207928_1003285	All Organisms → cellular organisms → Bacteria → Acidobacteria	2977	Open in IMG/M
3300026025\|Ga0208778_1003217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1491	Open in IMG/M
3300026304\|Ga0209240_1282188	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300027590\|Ga0209116_1030813	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300027767\|Ga0209655_10297028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300027884\|Ga0209275_10575017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300027889\|Ga0209380_10722682	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300027911\|Ga0209698_10314594	All Organisms → cellular organisms → Bacteria → Acidobacteria	1237	Open in IMG/M
3300028882\|Ga0302154_10191492	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300029914\|Ga0311359_10163526	All Organisms → cellular organisms → Bacteria → Acidobacteria	2019	Open in IMG/M
3300030659\|Ga0316363_10412595	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300030991\|Ga0073994_12020096	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300031249\|Ga0265339_10361255	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300031474\|Ga0170818_104867060	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300031718\|Ga0307474_11001297	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300031720\|Ga0307469_11419119	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300031754\|Ga0307475_10053139	All Organisms → cellular organisms → Bacteria → Acidobacteria	3048	Open in IMG/M
3300031962\|Ga0307479_10704972	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300032160\|Ga0311301_11076745	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300032783\|Ga0335079_11179131	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300032897\|Ga0335071_10088360	All Organisms → cellular organisms → Bacteria → Acidobacteria	3038	Open in IMG/M
3300034163\|Ga0370515_0203800	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.17%
Host-Associated	Host-Associated	4.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.31%
Aquatic	Environmental → Aquatic	15.86%
Plants	Host-Associated → Plants	4.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.48%
Freshwater	Environmental → Aquatic → Freshwater	11.03%
Sediment	Environmental → Aquatic → Sediment	4.83%
Peat	Environmental → Terrestrial → Peat	4.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.03%
Loam	Environmental → Terrestrial → Soil → Loam	13.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.07%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.14%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.07%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.07%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.07%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.07%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.38%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.38%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.69%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.69%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001635	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_04384870	2189573000	Grass Soil	LLVQAYYQDVQTEKLHEVEAKLRGTNVPTIEQALVVPGVRAKRPNM
FG2_07777660	2189573004	Grass Soil	YYQTEQTDKLHEVEAKLRGTNVPTMEQALVVPVVRAKRPNI
JGI1027J11758_110387132	3300000789	Soil	EKLHAIEARLRGTNVPTMEQALVVPVARSKRPNI*
JGI1027J11758_124567392	3300000789	Soil	TMELLVQAHYQTMQTAKLHAAEAKLRGNNLPTMEQAIVVPAARSKRPNI*
JGI12712J15308_101497792	3300001471	Forest Soil	MQLLVQAYYETGKTEQLYEIEERLRGTNVPTMEQALVVPAVRAKLPIM*
JGI12659J15293_101235671	3300001546	Forest Soil	KTDKLYEIEEKLRGTNLPTMEQALVVPAARAKLPIM*
JGI20243J16304_1011572	3300001635	Forest Soil	SDKLAEVEGKLRGTNVPTMEQALVVPAARLRRPEI*
JGIcombinedJ26739_1005023502	3300002245	Forest Soil	QTDKLHAAEAKLRGTNVPTMEQALVVPAMRAKRPII*
JGIcombinedJ26739_1015197931	3300002245	Forest Soil	LLVQAYYETGKTEQLYEIEERLRGTNVPTMEQALVVPAVRAKLPIM*
Ga0062389_1019898691	3300004092	Bog Forest Soil	LVQAYYQTNQSDKLAQAEATLRGTNVPTIEQALVVPAARLRRPQM*
Ga0062386_1015198722	3300004152	Bog Forest Soil	LELLVQAYYQTNQSDKLHQAEAILRGTNVPTMEQALVVPAARSRRPEI*
Ga0066679_110004592	3300005176	Soil	VQAYYLTMQTEKLHTAEAKLRGYNMPTMEQALVVPAARSKRPNI*
Ga0070708_1013615552	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ELLVQAYYQTAQTDKLHELEAKLRGTNVPTMEQALVVPAVRAKRPNI*
Ga0070733_102465791	3300005541	Surface Soil	YYQTEQVDKLHEVEAKLRGTNVPTMEQALVVPAARAKRPVI*
Ga0070733_106781801	3300005541	Surface Soil	PFTMELLVQAYYESGATEKLHEIEARLRGTNLPTMEQALVVPGLRLKRPTM*
Ga0070732_101657924	3300005542	Surface Soil	AYYQTSQPDKVHEIEVKLRGTNVPTMEQALVVPAARTRKPTS*
Ga0070761_109381362	3300005591	Soil	LLVQAYYQTNQSDKLAEAEAKLRGTNVATMEQALVVAAARLRRPEM*
Ga0070762_100960464	3300005602	Soil	LVQAYYQTMQTEKLHEVEARLRGTNVPTMEQALVVPAARAKRPVI*
Ga0070762_104844003	3300005602	Soil	FTMELLVQAYYQTAQTDKLHAAEAKLRGTNVPTMEQALVVPAMRAKRPII*
Ga0066903_1042224811	3300005764	Tropical Forest Soil	ELLVQAYYQTMQADKLHEAEAKLRSTNVPTMEQALVVPGARSKRPNI*
Ga0070717_119279621	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QTEQTEKLHAIEARLRGTNVPTMEQALVVPVARSKRPNI*
Ga0070717_120953651	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QTDKLHEVEAKLRGTNVPTIEQALVVPGARAKRPVI*
Ga0075019_100852261	3300006086	Watersheds	ELLVQAYYQTMQIDKLHEAEAKLRGTNVPTMEQALVVPGIRSKRPNI*
Ga0075030_1002882591	3300006162	Watersheds	MDLLIQAYYQTMQTDKLHAAEAKLRGTNVPTMEQALVVPAARSKRPNI*
Ga0075030_1003235711	3300006162	Watersheds	MQTDKLHELEARLRGTNVPTMEQALVVPAARAKRPVI*
Ga0075030_1014273812	3300006162	Watersheds	MELLVQAYYQTMQTDKLHELEAKLRGTNLPTMEQALVVPAARAKRPII*
Ga0070715_100813461	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ASDKRHEVEVKLRASNAPTMEQALVVPAARARRPDGL*
Ga0075014_1008957922	3300006174	Watersheds	TMELLVQAYYQTLQTDKLHEVEARLRGTNMPTMEQALVVPAARAKRPNI*
Ga0079222_121838622	3300006755	Agricultural Soil	LLVQAYYQTSQPEKLHEVEVRLRGTNVPTMEQALVVPAARARRPTI*
Ga0066659_105976183	3300006797	Soil	TMELLVQAYYQTMQTEKLHTAEAKLRGNNMPTMEQALVVPAARSKRPNI*
Ga0079219_118413581	3300006954	Agricultural Soil	QTEKLHEVEAKLRGTNVPTMEQALVVPVARAKRPVI*
Ga0099792_100836091	3300009143	Vadose Zone Soil	LLVQAYYQTNQSDKLHEVEAKLRGTNVATMEQAVVVPTIRLQRPQI*
Ga0116222_12606711	3300009521	Peatlands Soil	PDKLHEVEVRLRGTNVPTMEQALVVPAARARKPTS*
Ga0116105_10076421	3300009624	Peatland	NQSEKLHEAEAILRGTNVPTMEQALVVPAARSRRPEI*
Ga0116217_103083222	3300009700	Peatlands Soil	VQAYYQTFQPDKLHDIEVRIRGTNVPTMEQALVVPAARARRPTS*
Ga0126374_108766071	3300009792	Tropical Forest Soil	MELLVQAYYQTLQTDKLHEAEVKLRGTNVPTMEQALVVPAARSKRPNI*
Ga0116223_103442791	3300009839	Peatlands Soil	MELLVQAYYQTFQPEKLHDVEVKLRGTNVPTMEQALVVPAARARRPTS*
Ga0126372_100795781	3300010360	Tropical Forest Soil	TEKLHEAEAKLRSTNVPTMEQALVVPAARSKRPNI*
Ga0126381_1014745431	3300010376	Tropical Forest Soil	QTDKLHEAEAKLRGTNVPTMEQAIVVPAARSKRPNI*
Ga0136449_1016418032	3300010379	Peatlands Soil	FTMELLVQAYYQTFQPDKLHDIEVRIRGTNVPTMEQALVVPAARARRPTS*
Ga0126361_105243031	3300010876	Boreal Forest Soil	QAYYQTAQTDKLHEVEAKLRGTNVPTMEQALVVPAIRAKRPVI*
Ga0137391_103368331	3300011270	Vadose Zone Soil	DKLHEIEAKLRATNVPTMEQALVVPAARSKRPYI*
Ga0137389_105069203	3300012096	Vadose Zone Soil	YQTNQSEKLHEAEARLRGTNVPTMEQALVVPAARSRRPQI*
Ga0150984_1184594161	3300012469	Avena Fatua Rhizosphere	DNPFSMELLVQAYYQTSQPEKVHEMEVKLRGTNMPTMEQALVVPAARSRKPTS*
Ga0157356_10213372	3300012474	Unplanted Soil	ELLVQAYYQTMQTDKLHAAEAKLRGNNMPTMEQALVVPAARSKRPNI*
Ga0137395_107692612	3300012917	Vadose Zone Soil	ELLVQAYYQTNQSDKLHAIEAKLRGTNVATMEQAVVVPAVRLQRPQI*
Ga0137396_107156023	3300012918	Vadose Zone Soil	YYQTNQPDKLHEVEAKLRGTNVPTMEQALVVPAARSRRPAI*
Ga0137413_101886533	3300012924	Vadose Zone Soil	FTMELLVQAYYQTNQLEKLHEAEAKLRGTNVPTMEQALVVPAARSRRPQI*
Ga0137413_110330772	3300012924	Vadose Zone Soil	ELLVQAYYQTNQSDKLHEVEAKLRGTNVATMEQAVVVPTIRLQRPQI*
Ga0181537_112005712	3300014201	Bog	YYQTGQAEKLNQIEAKLRGTNVPTIEQALVVPAARLRRPEM*
Ga0181525_103997213	3300014654	Bog	QAYYQTEQTDKLHEAEAKLRGTNVPTMEQALVVPAARAKRPNI*
Ga0181519_105598421	3300014658	Bog	DKLHDMEAKLRGTNVATMEQALVVPAARAKRPQT*
Ga0182037_121537151	3300016404	Soil	QVEKLHQIEAKLRGTNVPTMEQALVVPAERTKRPNI
Ga0182038_102689321	3300016445	Soil	FTMELLVQAYYQTMQTEKLHEAEVKLRGTNVPTMEQALVGPAARTKRPNI
Ga0187803_101410371	3300017934	Freshwater Sediment	MELLVQAYYQTMQTDKLHAAEAKLRGTNVPTMEQALVVPAARSKRPNI
Ga0187808_104550541	3300017942	Freshwater Sediment	ETSQPDKLHEVEVKLRGTNVPTMEQALVVPAARARRPVI
Ga0187817_106332791	3300017955	Freshwater Sediment	QAYYQTMQTEKLHAAEAKLRGTNVPTMEQALVVPAARSKRPNI
Ga0187776_110986421	3300017966	Tropical Peatland	AYFETGQMDKKDEIEVKLRGTNVPTMEQALIVPGVRSKPPASM
Ga0187810_104713182	3300018012	Freshwater Sediment	TMELLVQAYYQTMQTEKLHEVEAKLRGTNVPTMEQALVVPAIRAKRPNI
Ga0187882_11371703	3300018021	Peatland	YYQSSQTEKLAEAEAKLRSTNVPTMEQALVVPAARLRRPEI
Ga0187857_104738382	3300018026	Peatland	FTMELLVQAYYETGLTDKLHEIEGKLRGTNLPTMEQALVVPAMRSSRPII
Ga0187871_108049792	3300018042	Peatland	FTMELLVQAYYQTNQPDKLAEAEAKLRGTNVPTMEQAIVVPAARLRRPEM
Ga0187772_107891611	3300018085	Tropical Peatland	TNQSDKLVQAEAKLRGTNVPTMEQALVVPAARLRRPEM
Ga0187772_110481551	3300018085	Tropical Peatland	LLVQAYYQTLQTDRLHDMEAKLRSTNVPTVEQAVVVPSIRAKQPSL
Ga0187769_114118141	3300018086	Tropical Peatland	LLVQAYYQTLDTEKLHEMEVKLRGTNVPTMEQALVVPAARAKRPTI
Ga0187770_111183261	3300018090	Tropical Peatland	LELLAQAYYQTSQPDKLHEVEVKLRGTNVPTMEQALIVPAARSRRPVI
Ga0187798_11889311	3300019275	Peatland	LETEKLHEIEAKLRATNVPTIEQALVVPVIRAKRPNT
Ga0193726_10430942	3300020021	Soil	LLVQAYYQTDQPEKLHEVEGKLRGTNVPTMEQALVVPAARAKRPII
Ga0210407_101477764	3300020579	Soil	GLTDKLHEIEGKLRGTNLPTMEQALVVPAMRSSRPII
Ga0210401_110186762	3300020583	Soil	QAYYQSGQSDKLAQAEARLRGTNVPTMEQAIVVPAARLRRPEM
Ga0210401_113855222	3300020583	Soil	VQAYYKTYQPDKLHEVEVKLRGTNVPTMEQALVVPAARARRPTI
Ga0210404_107781632	3300021088	Soil	YQTAQTDKLHEAEEKLRGTNVPTMEQALVVPAVRATRPHM
Ga0210396_100439781	3300021180	Soil	YKTYQPDKLHEVEVKLRGTNVPTMEQALVVPAARARRPTI
Ga0210388_108659292	3300021181	Soil	TEKLHELEAKLRGTNVPTLEQALVVPAARARRPVI
Ga0210393_112729152	3300021401	Soil	VQAYYKTYQPDKLHEVEVKLRGTNMPTMEQALVVPAARARRPTI
Ga0210389_101627281	3300021404	Soil	AYYQTEQTDKLHETEAKLRGTNVPTMEQALVVPAARAKRPNI
Ga0210387_106433591	3300021405	Soil	FTMELLVQAYYQTGQTDKLHQTEAKLRGTNVATMEQALVVPAARLRRPQI
Ga0210386_109344313	3300021406	Soil	YYKTYQPDKLHEVEVKLRGTNVPTMEQALVVPAARARRPTI
Ga0210384_116820321	3300021432	Soil	TMELLVQAYYQTNQSEKLHQAEARLRGTNVPTMEQAIVVPAARLRRPEI
Ga0210402_106843383	3300021478	Soil	QAYYQTEQTDKLHEIEAKLRGTNVPTMEQALVVPAARAKRPVI
Ga0126371_114741453	3300021560	Tropical Forest Soil	LVQAYYETSQPDRLHEVEVKLRGTNVPTMEQALVVPVARSRRPVI
Ga0213853_105462662	3300021861	Watersheds	LVQAYYQTYQPEKVHEMEVKLRGTNVPTMEQALVVPAARAKRPTS
Ga0242659_10489144	3300022522	Soil	LVQAYYQTNQSEKLHEAESQLRGTNVPTMEQALVVPAARLRRPEI
Ga0242655_100041631	3300022532	Soil	FTMELLVQAYYQTTQPEKLHAAEAKLRGYNMPTMEQALVVPAARSKRPNI
Ga0242662_100882901	3300022533	Soil	QTNQSDKLHEAEGKLRGTNVPTMEQALVVPAARSRRPEI
Ga0242657_12082182	3300022722	Soil	ELLVQAYYQTNQSDKLHEAESLLRGTNVPTMEQALVVPAARLRRPEI
Ga0242654_102572512	3300022726	Soil	QAYYQTEQPEKLHEVEAKLRGTNVPTMEQALVVPEARAKRPII
Ga0224570_1099352	3300022730	Rhizosphere	LLVQAYYQTNQSDKLAEVEARLRGTNVPTMEQALVVPAARLRRPEM
Ga0224571_1050752	3300022734	Rhizosphere	LLVQAYYQTNQSDKLHEVEAKLRSTNVPTMEQALVVPAARLRRPEI
Ga0224550_10646901	3300022873	Soil	LLVQAYYQTNQSDKLAEAEAKLRGTNVATMEQALVVAAARLRRPEM
Ga0247672_10944892	3300024187	Soil	VQAYYQTEQTEKLHAIEARLRGTNVPTMEQALVVPVARSKRPNI
Ga0208935_10618001	3300025414	Peatland	TNQSEKLHEAEAILRGTNVPTMEQALVVPAARSRRPEI
Ga0207928_10032856	3300025494	Arctic Peat Soil	ELLVQAYYQTEQTDKLHEVEAKLRGTNMPTMEQALVVPAARAKRPVI
Ga0207695_110300081	3300025913	Corn Rhizosphere	QAYYQTSQPEKVHEIEVKLRGMNVPTMEQALVVPAARLRKPTS
Ga0208778_10032171	3300026025	Rice Paddy Soil	FSMELLVQAYYHTSQPEKVHEIEVKLRGNNMPTMEQALVVPAARSRKPTS
Ga0209240_12821882	3300026304	Grasslands Soil	PYTMELLVQAYYETSQTDKLHEIEAKLRGTNVPTMEQALVVPAARSKRPAI
Ga0209116_10308131	3300027590	Forest Soil	EQVDKLHEVEAKLRGTNVPTMEQALVVPAARAKRPVI
Ga0209655_102970282	3300027767	Bog Forest Soil	SLELLVQAYYQTNQTEKLHQAEATLRGTNVPTMEQALVVPAARLRRPQI
Ga0209580_105796741	3300027842	Surface Soil	YYQTEQTDKLHEIEAKLRGTNVPTMEQALVVPAARAKRPVI
Ga0209693_101312671	3300027855	Soil	TYQTDKLHEVEVKLRGTNVPTMEQALVVPAARARRPTI
Ga0209693_105004332	3300027855	Soil	TMQTEKLHTAEAKLRGYNMPTMEQALVVPAARSKRPNI
Ga0209169_102490562	3300027879	Soil	QSDKLAEAEARLRGTNVPTMEQAIVVPAARLRRPEM
Ga0209275_105750171	3300027884	Soil	FTLELLVQAYYKTYQPDKLHEVEVKLRGTNMPTMEQALVVPAARARRPTI
Ga0209380_107226822	3300027889	Soil	ELLVQAYYQTNQSDKLAEAEARLRGTNVPTMEQAIVVPAARLRRPEM
Ga0209415_105966691	3300027905	Peatlands Soil	QPDKLHEVEVKLRGTNMPTMEQALVVPAARARRPTI
Ga0209006_112774212	3300027908	Forest Soil	DLQTDKLHEVESRLRGTNIPTIEQAVVVPAVRAQRPHM
Ga0209698_103145941	3300027911	Watersheds	ELLVQAYYQTMQIDKLHEAEAKLRGTNVPTMEQALVVPGIRSKRPNI
Ga0209698_107630691	3300027911	Watersheds	SNQPEKLHELEVRLRSTNVPTLEQALIVPAARARVPQS
Ga0265354_10078663	3300028016	Rhizosphere	YYQTNQSDKLAEAEATLRGTNVPTMEQALVVPAVRLRRPEM
Ga0302232_104361651	3300028789	Palsa	YYQTNQSDKLAQAEGRLRGTNVPTMEQALVVPAARLRRPEM
Ga0302154_101914923	3300028882	Bog	PFTLELLVQAYYQTNQSENLAQAEARLRGTNVPTMEQALVVPAARSRRPQI
Ga0311359_101635265	3300029914	Bog	FSMELLVQAYYQTDQSDKLHDIEARLRGTNVPTMEQALVVPAARLRRPEI
Ga0302188_101482171	3300029986	Bog	SDKLHDIEARLRGTNVPTMEQALVVPAARLRRPEI
Ga0311337_100940545	3300030000	Fen	AFDKMHEAQAKLRATNLPTMEQALVVPAARAKRPE
Ga0316363_104125952	3300030659	Peatlands Soil	FTMELLVQAYYQTGQSDKLAEAEAKLRGTNVPTMEQALVVPAARLRRPEI
Ga0265460_111883752	3300030740	Soil	LVQAYYQTEQTEKLHALEAKLRGPNVPTMDQALVVPAARARRPVI
Ga0265746_10192031	3300030815	Soil	TNQSDKLAEAESKLRATNVPTMEQAIVVPAARLRRPEI
Ga0265770_10945772	3300030878	Soil	QAYYQTYQPDKLHEVEVRLRGTNVPTMEQALVVPAARARRPTI
Ga0265770_11494922	3300030878	Soil	GKTDKLNEIEERLRGTNMPTMEQALVVPAVRAKLPIM
Ga0075399_114410291	3300030967	Soil	YQTEQSEKLHETEAKLRGMNVPTMEQALVVPAARAKRPNI
Ga0073994_120200961	3300030991	Soil	MELLARAYYQTNQPEKLHEVEAKLRGTNVPTMEQALVVPAARSRRPAI
Ga0170824_1018192573	3300031231	Forest Soil	AYYQTEKPEKLHEAEAKLRGTNTPTMEQALVVPAARAKRPNI
Ga0302325_122450712	3300031234	Palsa	YYETGKTDKLNEIEERLRGTNLPTMEQALVVPAVRAKLPIM
Ga0265325_103202412	3300031241	Rhizosphere	YYQTEKTDKLHETEAKLRGTNVPTMEQALVVPALRAKRPII
Ga0265339_103612552	3300031249	Rhizosphere	MELLVQAYYQTYQPDKVHEMEVKLRGTNVPTMEQALVVPAARSKRPTS
Ga0170820_135249393	3300031446	Forest Soil	YQTEKPEKLHEAEAKLRGTNTPTMEQALVVPALRAKRPNI
Ga0170818_1048670602	3300031474	Forest Soil	VQAYYQTEKPEKLHEAEAKLRGTNTPTMEQALVVPALRAKRPNI
Ga0310915_108067011	3300031573	Soil	GSSDKMHEVEAKLRGTNVPTIEQALVVPAARSRKPSTI
Ga0307474_101075571	3300031718	Hardwood Forest Soil	AYYQTNQSDKLAQAEAVLRSTNVPTMEQAVVVPAARLRRPEI
Ga0307474_110012972	3300031718	Hardwood Forest Soil	SMELLVQAYYQTNKSDKLAEAEAKLRGTNVPTMEQALVVPAARLRRPQI
Ga0307469_114191192	3300031720	Hardwood Forest Soil	LELLVQAYYQTEKLEKLHEAEAKLRGTNVPTMEQALVVPAARAKRPVI
Ga0307475_100531398	3300031754	Hardwood Forest Soil	LLVRAYYQTSQTDKLHEVEARLRGTNVPTMEQALVVPAARSKRPAI
Ga0318568_105131212	3300031819	Soil	YQTTQTEKLHEVEAKLRGFNMPTMEQALVVPEIRSKRPNM
Ga0307479_107049721	3300031962	Hardwood Forest Soil	SDKLHQAEAKLRGTNVPTMEQALVVPAARLRRPEI
Ga0307479_108162941	3300031962	Hardwood Forest Soil	AYYQTGQSDKLHQTEATLRGTNVPTMEQALVVPAARSRRPEI
Ga0311301_110767452	3300032160	Peatlands Soil	MELLVQAYYQDLQTDKLHEVEARLRGTNVPTMEQALVVPALRSKRPNM
Ga0311301_125463301	3300032160	Peatlands Soil	QPEKLHETEAKLRGTNVPTMEQALVVPAARAKRPVI
Ga0307471_1020490031	3300032180	Hardwood Forest Soil	YYQTMQTDKLHTAETKLRGNNLPTMEQAIVVPAARSKRPNI
Ga0335079_111791312	3300032783	Soil	LVQAYYQDLQTDKLHEVEAKLRGTNVPTMEQALVVPAVRAKRPNM
Ga0335078_105278361	3300032805	Soil	ASDKMHAVEAKLRGTNVPTIEQALVVPAARSRKPETI
Ga0335080_112610522	3300032828	Soil	YQTIETEKMHEMEARLRGTNVPTMEQALVVPAIRAKKPNM
Ga0335071_100883601	3300032897	Soil	ELLVQAYYQTEQMEKLHAIEARLRGTNVPTMEQALVVPAERMKRPII
Ga0370515_0062110_3_119	3300034163	Untreated Peat Soil	TNQSDKLAQAEGRLRGTNVPTMEQALVVPAARLRRPEM
Ga0370515_0105368_1074_1214	3300034163	Untreated Peat Soil	LLVQAYYETGATDKLHEIEGKLRGTNLPTMEQALVVPAMRSSRPII
Ga0370515_0203800_695_841	3300034163	Untreated Peat Soil	LELLVQAYYQTSQSDKLHQAEARLRGTNVPTMEQALVVPAARSRRPEI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050728

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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