Metagenome / Metatranscriptome Family F050608

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050608
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	68 residues
Representative Sequence	MRLRIRTLLCCTAIFSAVSFFTITFAETNPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Number of Associated Samples	105
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.08 %
% of genes near scaffold ends (potentially truncated)	97.24 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.448 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (37.241 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.448 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.29% β-sheet: 14.29% Coil/Unstructured: 51.43%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF02036	SCP2	5.52
PF08922	DUF1905	2.76
PF13376	OmdA	2.76
PF13091	PLDc_2	1.38
PF08240	ADH_N	1.38
PF00583	Acetyltransf_1	1.38
PF13646	HEAT_2	1.38
PF00411	Ribosomal_S11	0.69
PF00425	Chorismate_bind	0.69
PF00939	Na_sulph_symp	0.69
PF13460	NAD_binding_10	0.69
PF03551	PadR	0.69
PF05016	ParE_toxin	0.69
PF14534	DUF4440	0.69
PF00685	Sulfotransfer_1	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0100	Ribosomal protein S11	Translation, ribosomal structure and biogenesis [J]	0.69
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.69
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.69
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.69
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.69
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.45 %
Unclassified	root	N/A	36.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.45 %
Unclassified	root	N/A	36.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.45 %
Unclassified	root	N/A	36.55 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	36.55 %
Unclassified	root	N/A	36.55 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	36.55 %
Unclassified	root	N/A	36.55 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.55 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	30.34 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.69 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.34 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.97 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.69 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.69 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.34 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	8.28 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.69 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.69 %
Rivibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rivibacter	0.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.34 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	8.28 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.69 %
Rivibacter subsaxonicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rivibacter → Rivibacter subsaxonicus	0.69 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.34 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	8.28 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.69 %
Rivibacter subsaxonicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rivibacter → Rivibacter subsaxonicus	0.69 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01AS39O	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104963109	Not Available	579	Open in IMG/M
3300004643\|Ga0062591_102309739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	562	Open in IMG/M
3300005289\|Ga0065704_10049074	Not Available	959	Open in IMG/M
3300005290\|Ga0065712_10015553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1563	Open in IMG/M
3300005293\|Ga0065715_10666617	Not Available	670	Open in IMG/M
3300005294\|Ga0065705_10049698	Not Available	859	Open in IMG/M
3300005294\|Ga0065705_10453554	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005294\|Ga0065705_11135318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	514	Open in IMG/M
3300005328\|Ga0070676_11282875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	559	Open in IMG/M
3300005328\|Ga0070676_11497611	Not Available	519	Open in IMG/M
3300005338\|Ga0068868_101742974	Not Available	587	Open in IMG/M
3300005340\|Ga0070689_102147964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	511	Open in IMG/M
3300005341\|Ga0070691_10881874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	550	Open in IMG/M
3300005353\|Ga0070669_100096623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2223	Open in IMG/M
3300005353\|Ga0070669_100241767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1434	Open in IMG/M
3300005353\|Ga0070669_100655277	Not Available	883	Open in IMG/M
3300005353\|Ga0070669_100708329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300005354\|Ga0070675_102140799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005355\|Ga0070671_100111179	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300005355\|Ga0070671_100627726	Not Available	929	Open in IMG/M
3300005366\|Ga0070659_101065271	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005367\|Ga0070667_101016962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300005434\|Ga0070709_10295613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1181	Open in IMG/M
3300005434\|Ga0070709_11054520	Not Available	648	Open in IMG/M
3300005434\|Ga0070709_11625452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	526	Open in IMG/M
3300005435\|Ga0070714_101097258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	775	Open in IMG/M
3300005435\|Ga0070714_101965461	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005437\|Ga0070710_10376059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	946	Open in IMG/M
3300005438\|Ga0070701_10144143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1365	Open in IMG/M
3300005439\|Ga0070711_101561890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300005455\|Ga0070663_101442605	Not Available	611	Open in IMG/M
3300005457\|Ga0070662_101789983	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005543\|Ga0070672_100118030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2169	Open in IMG/M
3300005548\|Ga0070665_100530066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1189	Open in IMG/M
3300005563\|Ga0068855_101517700	Not Available	687	Open in IMG/M
3300005614\|Ga0068856_100657121	Not Available	1069	Open in IMG/M
3300005615\|Ga0070702_101414063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	569	Open in IMG/M
3300005718\|Ga0068866_11414411	Not Available	509	Open in IMG/M
3300005841\|Ga0068863_100911566	Not Available	879	Open in IMG/M
3300005844\|Ga0068862_101581447	Not Available	662	Open in IMG/M
3300006173\|Ga0070716_100324659	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300006173\|Ga0070716_101692694	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300006358\|Ga0068871_101010635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	775	Open in IMG/M
3300006755\|Ga0079222_11116874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300006804\|Ga0079221_11747476	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300009176\|Ga0105242_11223164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	771	Open in IMG/M
3300010396\|Ga0134126_11928815	Not Available	646	Open in IMG/M
3300010399\|Ga0134127_12132679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	639	Open in IMG/M
3300010401\|Ga0134121_10190699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1768	Open in IMG/M
3300010401\|Ga0134121_12202439	Not Available	588	Open in IMG/M
3300010403\|Ga0134123_10571492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1080	Open in IMG/M
3300012483\|Ga0157337_1008733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300012885\|Ga0157287_1122984	Not Available	506	Open in IMG/M
3300012913\|Ga0157298_10097759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300012951\|Ga0164300_10067761	Not Available	1471	Open in IMG/M
3300012951\|Ga0164300_10727948	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012957\|Ga0164303_10639960	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300012958\|Ga0164299_10944688	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012960\|Ga0164301_10252261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1159	Open in IMG/M
3300012960\|Ga0164301_10388825	Not Available	972	Open in IMG/M
3300012961\|Ga0164302_11042584	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012984\|Ga0164309_11021312	Not Available	683	Open in IMG/M
3300012986\|Ga0164304_10099456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1730	Open in IMG/M
3300012987\|Ga0164307_11193744	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012987\|Ga0164307_11400914	Not Available	589	Open in IMG/M
3300012988\|Ga0164306_11939579	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300013296\|Ga0157374_10705446	Not Available	1022	Open in IMG/M
3300013296\|Ga0157374_11445268	Not Available	711	Open in IMG/M
3300013296\|Ga0157374_11753939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	646	Open in IMG/M
3300013297\|Ga0157378_10045895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3884	Open in IMG/M
3300013306\|Ga0163162_11495082	Not Available	769	Open in IMG/M
3300014325\|Ga0163163_10521589	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300014745\|Ga0157377_10464611	Not Available	877	Open in IMG/M
3300014968\|Ga0157379_10939001	Not Available	822	Open in IMG/M
3300014969\|Ga0157376_13039289	Not Available	508	Open in IMG/M
3300015077\|Ga0173483_10039355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1761	Open in IMG/M
3300015372\|Ga0132256_101623703	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300015372\|Ga0132256_102274833	Not Available	646	Open in IMG/M
3300015372\|Ga0132256_103009938	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300015372\|Ga0132256_103390599	Not Available	536	Open in IMG/M
3300015373\|Ga0132257_101251081	Not Available	941	Open in IMG/M
3300015374\|Ga0132255_105363902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	543	Open in IMG/M
3300017930\|Ga0187825_10238260	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	664	Open in IMG/M
3300019361\|Ga0173482_10044363	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300019885\|Ga0193747_1019583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1662	Open in IMG/M
3300021088\|Ga0210404_10361528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300025315\|Ga0207697_10012189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3613	Open in IMG/M
3300025315\|Ga0207697_10033205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2112	Open in IMG/M
3300025315\|Ga0207697_10043105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1855	Open in IMG/M
3300025315\|Ga0207697_10126419	Not Available	1103	Open in IMG/M
3300025906\|Ga0207699_10993816	Not Available	620	Open in IMG/M
3300025907\|Ga0207645_10093362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1936	Open in IMG/M
3300025915\|Ga0207693_10166710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1734	Open in IMG/M
3300025915\|Ga0207693_10681303	Not Available	797	Open in IMG/M
3300025916\|Ga0207663_11595750	Not Available	525	Open in IMG/M
3300025922\|Ga0207646_10673381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	926	Open in IMG/M
3300025923\|Ga0207681_10210789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1497	Open in IMG/M
3300025923\|Ga0207681_10293893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1283	Open in IMG/M
3300025925\|Ga0207650_10595754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300025926\|Ga0207659_10523776	Not Available	1005	Open in IMG/M
3300025928\|Ga0207700_10847627	Not Available	818	Open in IMG/M
3300025930\|Ga0207701_10251077	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300025930\|Ga0207701_10376614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1225	Open in IMG/M
3300025930\|Ga0207701_11325493	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300025931\|Ga0207644_10287967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1320	Open in IMG/M
3300025932\|Ga0207690_10249564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1370	Open in IMG/M
3300025936\|Ga0207670_10420662	Not Available	1072	Open in IMG/M
3300025936\|Ga0207670_11633172	Not Available	548	Open in IMG/M
3300025944\|Ga0207661_10279987	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300025960\|Ga0207651_11498369	Not Available	607	Open in IMG/M
3300026023\|Ga0207677_10701446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	898	Open in IMG/M
3300026023\|Ga0207677_11458216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	631	Open in IMG/M
3300026089\|Ga0207648_10239200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1616	Open in IMG/M
3300026095\|Ga0207676_11099516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300026142\|Ga0207698_11708933	Not Available	645	Open in IMG/M
3300026142\|Ga0207698_11934706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300026714\|Ga0207567_100162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	848	Open in IMG/M
3300027821\|Ga0209811_10362180	Not Available	561	Open in IMG/M
3300028379\|Ga0268266_10470886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1196	Open in IMG/M
3300028379\|Ga0268266_10531029	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300030973\|Ga0075395_10006826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1741	Open in IMG/M
3300031128\|Ga0170823_10522415	Not Available	546	Open in IMG/M
3300031170\|Ga0307498_10349542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	568	Open in IMG/M
3300031231\|Ga0170824_111017744	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300031231\|Ga0170824_116968837	Not Available	590	Open in IMG/M
3300031446\|Ga0170820_12615207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1047	Open in IMG/M
3300031446\|Ga0170820_14042409	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031469\|Ga0170819_10695601	Not Available	579	Open in IMG/M
3300031474\|Ga0170818_112024631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	860	Open in IMG/M
3300031474\|Ga0170818_115070956	Not Available	551	Open in IMG/M
3300031538\|Ga0310888_10713940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300031720\|Ga0307469_12257417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	530	Open in IMG/M
3300031740\|Ga0307468_101525480	Not Available	620	Open in IMG/M
3300031820\|Ga0307473_10243461	Not Available	1098	Open in IMG/M
3300032012\|Ga0310902_10255591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1058	Open in IMG/M
3300032174\|Ga0307470_10478049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300032174\|Ga0307470_11381376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300032180\|Ga0307471_103044755	Not Available	594	Open in IMG/M
3300032180\|Ga0307471_104185822	Not Available	509	Open in IMG/M
3300033475\|Ga0310811_10102916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rivibacter → Rivibacter subsaxonicus	3695	Open in IMG/M
3300033475\|Ga0310811_10285966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1914	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.86%
Host-Associated	Host-Associated	44.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.17%
Plants	Host-Associated → Plants	44.14%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.55%
Roots	Host-Associated → Plants → Roots	1.38%
Freshwater	Environmental → Aquatic → Freshwater	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.00%
Loam	Environmental → Terrestrial → Soil → Loam	15.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.14%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.38%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.38%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.07%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.07%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.38%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026714	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A1a-12 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_02248760	2170459009	Grass Soil	MFSAVSFFTITFAETAPFNKAQVADRIRKVENGVDDFEKYLTSRGEKAKDQAGSAKSSGAAK
F47_08541100	2170459009	Grass Soil	MFSAVSFFTITFAETAPFNKAQVADRIRKVENGVDDFEKYLTSRGEKAKDQAG
INPhiseqgaiiFebDRAFT_1049631091	3300000364	Soil	MRCRMQMTVCCTAILSAVGLFPITAAEITSFNKAQVADRIRKVEQGVDDFEKYLTTRGETAQDKAAA
Ga0062591_1023097391	3300004643	Soil	MRLKTRTILCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGESAKNQAG
Ga0065704_100490742	3300005289	Switchgrass Rhizosphere	MRLRIRTVLCGTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRG
Ga0065712_100155533	3300005290	Miscanthus Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSS
Ga0065715_106666172	3300005293	Miscanthus Rhizosphere	MRLRIRTLLCYTAIFSAVSFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSRGEN
Ga0065705_100496981	3300005294	Switchgrass Rhizosphere	MXLRIRTLLCCTAIFSAVSFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSA
Ga0065705_104535541	3300005294	Switchgrass Rhizosphere	MRSRIRTLLCCTAIFSAASFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGS
Ga0065705_111353181	3300005294	Switchgrass Rhizosphere	MRLKTRTILCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAK
Ga0070676_112828751	3300005328	Miscanthus Rhizosphere	MRLRIRPLLCGTAIFSAVCLFNIAFAETSPFSKAQVADRIRKVENGVDDFEKYLTTRGENAKDQAGSAK
Ga0070676_114976112	3300005328	Miscanthus Rhizosphere	MRLRIRTLLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAK
Ga0068868_1017429742	3300005338	Miscanthus Rhizosphere	MRLRIRTVLCCTAIFSSVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0070689_1021479641	3300005340	Switchgrass Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAK
Ga0070691_108818741	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGE
Ga0070669_1000966231	3300005353	Switchgrass Rhizosphere	MRSRMRNVVCFTAIFLGVGFFTITFAETTHFNKAQVGDRIRKVEQGVDDFEKYLSTRGENARDQASSAKSSGETK
Ga0070669_1002417673	3300005353	Switchgrass Rhizosphere	MRLRIRTVLCCTAIFSSVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKR
Ga0070669_1006552771	3300005353	Switchgrass Rhizosphere	MRLRIRTILCCTAIFSAVSFFTITFAETNPFSKAQVADSIRKVENGVDDFEKYLTSRGENAKDQAGSAKSS
Ga0070669_1007083292	3300005353	Switchgrass Rhizosphere	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Ga0070675_1021407992	3300005354	Miscanthus Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGA
Ga0070671_1001111791	3300005355	Switchgrass Rhizosphere	MRLRIRTILCCTAIFSAVSFFTITFAETNPFSKAQVADSIRKVENGVDDFEKYLTSRGENAKDQAGSAK
Ga0070671_1006277261	3300005355	Switchgrass Rhizosphere	MRLRIRTVLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKD
Ga0070659_1010652712	3300005366	Corn Rhizosphere	MHLRIRTLVCCTAIFSAVSFFTITFAETNPLSKAQVAEQIRKVENGVDDFEKYLTSRGENAKD
Ga0070667_1010169622	3300005367	Switchgrass Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSA
Ga0070709_102956132	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGEAK
Ga0070709_110545201	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTLLCCTAIFSAVSFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Ga0070709_116254521	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTLLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKRG
Ga0070714_1010972581	3300005435	Agricultural Soil	MRLRIRTLLCCTAIFSAVSFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSA
Ga0070714_1019654612	3300005435	Agricultural Soil	MRLRMRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Ga0070710_103760591	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGS
Ga0070701_101441434	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKD
Ga0070711_1015618902	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTVLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSR
Ga0070663_1014426052	3300005455	Corn Rhizosphere	MRLRIRTLLCCSAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Ga0070662_1017899832	3300005457	Corn Rhizosphere	MHLRIRTLVCCTAIFSAVSFFTITFAETNPLSKAQVAEQIRKVENGVDDFEKYLTSRGENAK
Ga0070672_1001180301	3300005543	Miscanthus Rhizosphere	MRSRMRNVVCFTAIFLGVGFFTITFAETTHFNKAQVGDRIRKVEQGVDDFEKYLSTRGENAR
Ga0070665_1005300661	3300005548	Switchgrass Rhizosphere	MRLRIRTLLCYTAIFSAVSFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGS
Ga0068855_1015177002	3300005563	Corn Rhizosphere	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAG
Ga0068856_1006571213	3300005614	Corn Rhizosphere	MRMTIKTLVCSGAIFSAVSCFTIAFAETSHFNKAQVGDLIRKVESGVNDFESYLTTRGENAQSNAASAKKEAKESGR
Ga0070702_1014140631	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRLKTRTILCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTTRGENAQNQAGSAK
Ga0068866_114144111	3300005718	Miscanthus Rhizosphere	MRLRIRTILCCTAIFSAVSFFTITFAETNPFSKAQVGDRIRKTENGVDDFEKYLTTRGENAKDQAGS
Ga0068863_1009115661	3300005841	Switchgrass Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKR
Ga0068862_1015814471	3300005844	Switchgrass Rhizosphere	MRSRMRNVVCFTAIFLGVGFFTITFAETTHFNKAQVGDRIRKVEQGVDDFEKYLSTRGENARDQASSAKSSGETKRG
Ga0070716_1003246592	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRLKMKTMLLGSAILSAVSFSTIIFAETTPFNKAQVADRIRAVENGVDDFDKYLRTRGENAQNQAASAKT
Ga0070716_1016926941	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRMRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAK
Ga0068871_1010106351	3300006358	Miscanthus Rhizosphere	MRLRIRTILCCTAIFSAVSFFTITFAETNPFSKAQVADSIRKVENGVDDFEKYLTSRG
Ga0079222_111168741	3300006755	Agricultural Soil	MRLRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKD
Ga0079221_117474762	3300006804	Agricultural Soil	MRSIFQNLVCCTAIVSAVGFFNITFAETTHFNKAQVGDRIRKVENGVDDFEKYLSTRGENVSNKAASAKN
Ga0105242_112231641	3300009176	Miscanthus Rhizosphere	MRLKTRTILCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTTRGENAQNQA
Ga0134126_119288151	3300010396	Terrestrial Soil	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0134127_121326792	3300010399	Terrestrial Soil	MHLRIRTLVCCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGE
Ga0134121_101906992	3300010401	Terrestrial Soil	MRLRIRTLLCCTAIFSAVSFFTIAFAETNPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKRGQ
Ga0134121_122024391	3300010401	Terrestrial Soil	MRLRIRTVLFCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAK
Ga0134123_105714921	3300010403	Terrestrial Soil	MRLRIRTLLCGTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQ
Ga0157337_10087332	3300012483	Arabidopsis Rhizosphere	MRLRLRTLLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGE
Ga0157287_11229842	3300012885	Soil	MRLRIRTVLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAK
Ga0157298_100977592	3300012913	Soil	MRLKTRTILCCTAIFSAVSFFSITFAETAPFNKAQVGDHIRKVENGVDDFEKYLTSRGENAKNQAGSAKSSGAAK
Ga0164300_100677611	3300012951	Soil	MRLRIKTLVCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0164300_107279481	3300012951	Soil	MRVRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKR
Ga0164303_106399602	3300012957	Soil	MRLRIRTVLFCTAIFSAVSFFTITFAETIPLSKAQVADRIRKVENGVDDFEKYLTSRGENAKDQ
Ga0164299_109446881	3300012958	Soil	MRLRIRTAVCCTAIFFAVSVFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKR
Ga0164301_102522611	3300012960	Soil	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDHFEKYLTSRGENAKEQAGSAKSGAKSSG
Ga0164301_103888253	3300012960	Soil	MRLRIKTLVCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSGAKSSGAA
Ga0164302_110425842	3300012961	Soil	MRLRIRTVIFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGEN
Ga0164309_110213122	3300012984	Soil	MNLRIRTVLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKD
Ga0164304_100994561	3300012986	Soil	MRLRIKTLVCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKRGQG
Ga0164307_111937441	3300012987	Soil	MHLRIRTLVCCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQDGSAKSSGAAK
Ga0164307_114009142	3300012987	Soil	MRLRIKTLVCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAA
Ga0164306_119395792	3300012988	Soil	MRLRIRTVLCGTAIFSAVSFFTITFAETNPFSKAQVADRIRKVENGVDDFEKYLTSRGENAKDQ
Ga0157374_107054461	3300013296	Miscanthus Rhizosphere	MTIKTLVCSGAIFSAVSCFTIAFAETSHFNKAQVGDLIRKVESGVNDFESYLTTRGENAQSNAAS
Ga0157374_114452682	3300013296	Miscanthus Rhizosphere	MRLRIRTLLCYTAIFSAVSFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKR
Ga0157374_117539391	3300013296	Miscanthus Rhizosphere	MRLRIRTVLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKR
Ga0157374_119549102	3300013296	Miscanthus Rhizosphere	VIFSAVSFFTITFAETNPFSKAQVADRIRKVENGVDDFEKYLTSRGEN
Ga0157378_100458954	3300013297	Miscanthus Rhizosphere	MRNVVCFTAIFLGVGFFTITFAETTHFNKAQVGDRIRKVEQGVDDFEKYLSTRGENARDQASSAK
Ga0163162_114950821	3300013306	Switchgrass Rhizosphere	MHLRIRTLVCCTAIFSAVSFFTITFAETNPLSKAQVAEQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0163163_105215892	3300014325	Switchgrass Rhizosphere	MRSKIRTLVCGTAILSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGEN
Ga0157377_104646112	3300014745	Miscanthus Rhizosphere	MSLRIRTVLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKRG*
Ga0157379_109390011	3300014968	Switchgrass Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAG
Ga0157376_130392891	3300014969	Miscanthus Rhizosphere	MRLRIRTLLCYTAIFSAVSFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSR
Ga0173483_100393553	3300015077	Soil	MRLRIRTILCCTAIFSAVSFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSR
Ga0132256_1016237031	3300015372	Arabidopsis Rhizosphere	MRVRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSS
Ga0132256_1022748331	3300015372	Arabidopsis Rhizosphere	MRLMIRTLLYCTAIFSALSFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQ
Ga0132256_1030099382	3300015372	Arabidopsis Rhizosphere	MRLRIRTVVCCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGEAKRG
Ga0132256_1033905991	3300015372	Arabidopsis Rhizosphere	MRSKIRTVLWCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTTRGDNAQD
Ga0132257_1012510811	3300015373	Arabidopsis Rhizosphere	MRLRIRTVLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQ
Ga0132255_1022829832	3300015374	Arabidopsis Rhizosphere	MRTVLCCTAIFSAVSFFTITFAETNPFSKAQVADRIRKVENGVDDFEKYLTSRGENAK
Ga0132255_1053639021	3300015374	Arabidopsis Rhizosphere	MRLGIRTAVCCTAIFSAVSFCTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGE
Ga0187825_102382601	3300017930	Freshwater Sediment	MRLRIRTLLCYTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENARDQAGTAKSNGAAKR
Ga0173482_100443631	3300019361	Soil	MRLRIRTVLCCTAIFSAVSFFTITFAETTPFNKAQVADRIRKVENGVDDFEKYLTSRGEKAKDQAGS
Ga0193747_10195833	3300019885	Soil	MRLRIRTVLCCTAIFSAVSFFTITFAETNPLSKAQVADRIRKVENGVDDFEKYLTTRGENAKN
Ga0210404_103615282	3300021088	Soil	MRLRIRTVLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Ga0207697_100121896	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0207697_100332051	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSA
Ga0207697_100431051	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTILCCTAIFSAVSFFTITFAETNPFSKAQVADSIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0207697_101264193	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTAVCCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0207699_109938162	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTVLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAA
Ga0207645_100933621	3300025907	Miscanthus Rhizosphere	MRLRMRTLLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAK
Ga0207693_101667101	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTILCCTAIFSAVSFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSRGEN
Ga0207693_106813031	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTLLCCTAIFSAVSFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGENAKD
Ga0207663_115957501	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTLLCCTAIFSAVSFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGENAKGQAGSAKSSG
Ga0207646_106733811	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLKMKTMLLGSAILSASFSTIIFAETTPFNKAQVADRIRAVENGVDDFDKYLRTRGDNAQNQAASAKTGAET
Ga0207681_102107892	3300025923	Switchgrass Rhizosphere	MRLRIRTLLCCTAIFSAVSFFTITFAETNPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Ga0207681_102938931	3300025923	Switchgrass Rhizosphere	MRSRMRNVVCFTAIFLGVGFFTITFAETTHFNKAQVGDRIRKVEQGVDDFEKYLSTRGENARDQASSAKSS
Ga0207650_105957541	3300025925	Switchgrass Rhizosphere	MRLKIRTVLCYTAIFSAVSFFTITFAETNPFSKAQVADSIRKVENGVDDFEKYLTSRGENAKDQAGSAKSS
Ga0207659_105237761	3300025926	Miscanthus Rhizosphere	MRLRIRTAVCCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAK
Ga0207700_108476271	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTVLFCTAIFSAVSFCTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGA
Ga0207701_102510771	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRIRTAVCCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSS
Ga0207701_103766142	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRIRTVLCGTAIFSAVGFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSRGEN
Ga0207701_113254931	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MHLRIRTLVCCTAIFSAVSFFTITFAETNPLSKAQVAEQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSS
Ga0207644_102879673	3300025931	Switchgrass Rhizosphere	MRSRMRNVVCFTAIFLGVGFFTITFAETTHFNKAQVGDRIRKVEQGVDDFEKYLSTRGENARDQAS
Ga0207690_102495644	3300025932	Corn Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSA
Ga0207670_104206623	3300025936	Switchgrass Rhizosphere	MRLRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Ga0207670_116331721	3300025936	Switchgrass Rhizosphere	MRSRMRNVVCFTAIFLGVGFFTITFAETTHFNKAQVGDRIRKVEQGVDDFEKYLSTRGEN
Ga0207661_102799871	3300025944	Corn Rhizosphere	MRLRLRTLLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSNGTAKR
Ga0207651_114983691	3300025960	Switchgrass Rhizosphere	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGEAKR
Ga0207677_107014461	3300026023	Miscanthus Rhizosphere	MRLRIRTVLCCTAIFSSVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKRGQ
Ga0207677_114582162	3300026023	Miscanthus Rhizosphere	MRLRIRTAVCCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDEAGSAKSSG
Ga0207648_102392001	3300026089	Miscanthus Rhizosphere	MRSRMRNVVCFTAIFLGVGFFTITFAETTHFNKAQVGDRIRKVEQGVDDFEKYLSTRGENARDQASSAK
Ga0207676_110995161	3300026095	Switchgrass Rhizosphere	MRLRIRTLLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKD
Ga0207698_117089331	3300026142	Corn Rhizosphere	MNLRIRTVLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKRGQG
Ga0207698_119347061	3300026142	Corn Rhizosphere	MRARIAVCCTAVLFAVGVFTITSAETNPFNKAQVGDRIRTVENGVDDFEKYLSTRGEN
Ga0207567_1001621	3300026714	Soil	MRLRIRTILCYTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKD
Ga0209811_103621801	3300027821	Surface Soil	MRLRIRTAVCCAAILSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTTRGGNAKDQAGSAK
Ga0268266_104708861	3300028379	Switchgrass Rhizosphere	MRLRIRTLLCYTAIFSAVSFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSA
Ga0268266_105310291	3300028379	Switchgrass Rhizosphere	MRSKIRTLVCGTAILSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAQDQ
Ga0075395_100068263	3300030973	Soil	MHLRIRTAVCCTAIFSAVSFLTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0170823_105224151	3300031128	Forest Soil	MRLRIRTLVCGTAILSAVSFFTITFAETNPLSKAQVADRIKKVENGVDDFEKYLTTRGEN
Ga0307498_103495421	3300031170	Soil	MRLRIRTLLCCTAIFSAVSFCTITFAETNPLSKTQVADQIRKVENGVDDFEKYLTGRG
Ga0170824_1110177443	3300031231	Forest Soil	MLCCTAIFSAVSFFTITFAETAPFNKAQVADRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKRGQGA
Ga0170824_1169688372	3300031231	Forest Soil	MRLRTKTLLCGTVIFSAVSLFTLAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGTAKR
Ga0170820_126152071	3300031446	Forest Soil	MLCCTAIFSAVSFFTITFAETAPFNKAQVADRIRKVENGVDDFEKYLTSRGENAKDQAGS
Ga0170820_140424091	3300031446	Forest Soil	MRLRIRTVLFCTAIFSAVSFFTITFAETTPFNKAQVADRIRKVENGVDDFEKYLTSRGENAKDQAGSA
Ga0170819_106956011	3300031469	Forest Soil	MRLRTKTLLCGTVIFSAVSLFTLAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSS
Ga0170818_1120246311	3300031474	Forest Soil	MHLRIRTLLYCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGS
Ga0170818_1150709561	3300031474	Forest Soil	MRLRIKTLVCGTAIFSAVSFCTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQ
Ga0310888_107139401	3300031538	Soil	MRLRIRTLLCCTAIFSAVSFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGENARDQAG
Ga0307469_122574171	3300031720	Hardwood Forest Soil	MRLRIKTLVCGTAIFSAVSFFTLAFAETSPFSKAQVADRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSGAAKRGQG
Ga0307468_1015254801	3300031740	Hardwood Forest Soil	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQA
Ga0307473_102434611	3300031820	Hardwood Forest Soil	MRLRIRTLLCCTAIFSAVSFFTITFAETTPLNKAQVGDRIRKVENGVDDFEKYLTSRGEKAKDQ
Ga0310902_102555911	3300032012	Soil	MRLRLRTLLCCTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKS
Ga0307470_104780492	3300032174	Hardwood Forest Soil	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKNQAGSAKSSGA
Ga0307470_113813762	3300032174	Hardwood Forest Soil	MRLRIRTLLCCTAIFSAVSFFTITFAETAPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQAGSAKSSG
Ga0307471_1030447551	3300032180	Hardwood Forest Soil	MRLRIRTVLFCTAIFSAVSFFTITFAETNPLSKAQVADQIRKVENGVDDFEKYLTSRGENAKDQAGSAKSS
Ga0307471_1041858221	3300032180	Hardwood Forest Soil	MRLRIRTLLCGTAIFSAVSFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQA
Ga0310811_101029161	3300033475	Soil	MRLRIRTLLCCTAIFSAVGFFTITFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENARDQAGSA
Ga0310811_102859665	3300033475	Soil	MRLRIRTVLCGTAIFSAVSFFTIAFAETTPFNKAQVGDRIRKVENGVDDFEKYLTSRGENAKDQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050608

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences