Metagenome / Metatranscriptome Family F050485

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050485
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	73 residues
Representative Sequence	MASHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA
Number of Associated Samples	103
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	30.28 %
% of genes near scaffold ends (potentially truncated)	25.52 %
% of genes from short scaffolds (< 2000 bps)	88.28 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.138 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.931 % of family members)
Environment Ontology (ENVO)	Unclassified (29.655 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.103 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.97% β-sheet: 28.71% Coil/Unstructured: 68.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.34.4.4: Nitrile hydratase beta chain	d3hhtb_	3hht	0.74561
b.34.4.4: Nitrile hydratase beta chain	d3a8gb_	3a8g	0.73021
b.34.13.0: automated matches	d3m9qa_	3m9q	0.71275
b.34.12.1: BAH domain	d3pt9a2	3pt9	0.70325
b.34.20.1: YorP-like	d2heqa1	2heq	0.68583

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00166	Cpn10	12.41
PF13451	zf-trcl	2.07
PF00076	RRM_1	2.07
PF16499	Melibiase_2	0.69
PF00118	Cpn60_TCP1	0.69
PF04854	DUF624	0.69
PF13620	CarboxypepD_reg	0.69
PF01812	5-FTHF_cyc-lig	0.69
PF00180	Iso_dh	0.69
PF08281	Sigma70_r4_2	0.69
PF03734	YkuD	0.69
PF13751	DDE_Tnp_1_6	0.69
PF01458	SUFBD	0.69
PF00528	BPD_transp_1	0.69
PF05096	Glu_cyclase_2	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	12.41
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.69
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.69
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.69
COG3823	Glutamine cyclotransferase	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG5578	Uncharacterized membrane protein YesL	Function unknown [S]	0.69

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
All Organisms	root	All Organisms	35.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
cellular organisms	root	All Organisms → cellular organisms	35.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	31.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	29.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	22.07 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Roseiflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae	21.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %
Chloroflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Roseiflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae	21.38 %
Oscillochloridaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Kouleothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix	20.00 %
Roseiflexus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	1.38 %
Oscillochloris	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Kouleothrix aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	20.00 %
Roseiflexus castenholzii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → Roseiflexus castenholzii	0.69 %
Oscillochloris trichoides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Oscillochloris trichoides	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.14 %
Kouleothrix aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	20.00 %
Oscillochloris trichoides DG-6	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Oscillochloris trichoides → Oscillochloris trichoides DG-6	0.69 %
Roseiflexus castenholzii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → Roseiflexus castenholzii	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120269111	Not Available	959	Open in IMG/M
3300004798\|Ga0058859_11764795	Not Available	588	Open in IMG/M
3300004801\|Ga0058860_11933676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	584	Open in IMG/M
3300005175\|Ga0066673_10477597	Not Available	734	Open in IMG/M
3300005332\|Ga0066388_103580945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	793	Open in IMG/M
3300005332\|Ga0066388_106683391	Not Available	581	Open in IMG/M
3300005356\|Ga0070674_101951665	Not Available	534	Open in IMG/M
3300005434\|Ga0070709_10768051	Not Available	754	Open in IMG/M
3300005441\|Ga0070700_100125505	Not Available	1725	Open in IMG/M
3300005445\|Ga0070708_101084445	Not Available	750	Open in IMG/M
3300005445\|Ga0070708_101831315	Not Available	563	Open in IMG/M
3300005455\|Ga0070663_100281950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1324	Open in IMG/M
3300005455\|Ga0070663_100708716	Not Available	856	Open in IMG/M
3300005455\|Ga0070663_101733038	Not Available	559	Open in IMG/M
3300005467\|Ga0070706_101370050	Not Available	648	Open in IMG/M
3300005471\|Ga0070698_102102099	Not Available	518	Open in IMG/M
3300005518\|Ga0070699_100092614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	2644	Open in IMG/M
3300005518\|Ga0070699_100783430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	872	Open in IMG/M
3300005536\|Ga0070697_100804162	Not Available	832	Open in IMG/M
3300005577\|Ga0068857_101634753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	629	Open in IMG/M
3300005840\|Ga0068870_10464481	Not Available	837	Open in IMG/M
3300005841\|Ga0068863_100267110	Not Available	1655	Open in IMG/M
3300006177\|Ga0075362_10717276	Not Available	522	Open in IMG/M
3300006237\|Ga0097621_102092723	Not Available	541	Open in IMG/M
3300006794\|Ga0066658_10266726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	917	Open in IMG/M
3300006847\|Ga0075431_100436001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1308	Open in IMG/M
3300006847\|Ga0075431_100477340	Not Available	1240	Open in IMG/M
3300006847\|Ga0075431_101209405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	718	Open in IMG/M
3300006852\|Ga0075433_10056369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	3432	Open in IMG/M
3300006853\|Ga0075420_100382982	Not Available	1217	Open in IMG/M
3300006871\|Ga0075434_101072466	Not Available	819	Open in IMG/M
3300006954\|Ga0079219_11945793	Not Available	557	Open in IMG/M
3300009094\|Ga0111539_10262866	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2009	Open in IMG/M
3300009098\|Ga0105245_10699556	Not Available	1047	Open in IMG/M
3300009098\|Ga0105245_12406702	Not Available	580	Open in IMG/M
3300009100\|Ga0075418_11051399	Not Available	881	Open in IMG/M
3300009100\|Ga0075418_11794296	Not Available	667	Open in IMG/M
3300009147\|Ga0114129_10237757	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300009147\|Ga0114129_10447060	Not Available	1695	Open in IMG/M
3300009147\|Ga0114129_10456477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Oscillochloris trichoides → Oscillochloris trichoides DG-6	1675	Open in IMG/M
3300009148\|Ga0105243_11762440	Not Available	649	Open in IMG/M
3300009156\|Ga0111538_11236623	Not Available	943	Open in IMG/M
3300009162\|Ga0075423_10360384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1525	Open in IMG/M
3300009162\|Ga0075423_12578398	Not Available	555	Open in IMG/M
3300009553\|Ga0105249_12059204	Not Available	643	Open in IMG/M
3300009686\|Ga0123338_10018144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	5000	Open in IMG/M
3300009789\|Ga0126307_11187488	Not Available	618	Open in IMG/M
3300009840\|Ga0126313_11804495	Not Available	512	Open in IMG/M
3300010038\|Ga0126315_11071814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	543	Open in IMG/M
3300010044\|Ga0126310_10287618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1126	Open in IMG/M
3300010044\|Ga0126310_11204766	Not Available	608	Open in IMG/M
3300010045\|Ga0126311_10851269	Not Available	738	Open in IMG/M
3300010362\|Ga0126377_12781740	Not Available	564	Open in IMG/M
3300010375\|Ga0105239_12148576	Not Available	649	Open in IMG/M
3300010375\|Ga0105239_12591517	Not Available	591	Open in IMG/M
3300010401\|Ga0134121_12647319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	546	Open in IMG/M
3300011119\|Ga0105246_10072370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2430	Open in IMG/M
3300011332\|Ga0126317_10540933	Not Available	508	Open in IMG/M
3300012201\|Ga0137365_11364398	Not Available	500	Open in IMG/M
3300012204\|Ga0137374_10003784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	17951	Open in IMG/M
3300012204\|Ga0137374_10091590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	2900	Open in IMG/M
3300012204\|Ga0137374_10152270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	2062	Open in IMG/M
3300012212\|Ga0150985_100944215	Not Available	541	Open in IMG/M
3300012212\|Ga0150985_101655673	Not Available	850	Open in IMG/M
3300012212\|Ga0150985_103468815	Not Available	668	Open in IMG/M
3300012212\|Ga0150985_106693911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	937	Open in IMG/M
3300012212\|Ga0150985_108938630	Not Available	1230	Open in IMG/M
3300012212\|Ga0150985_117250447	Not Available	1101	Open in IMG/M
3300012212\|Ga0150985_118772073	Not Available	917	Open in IMG/M
3300012350\|Ga0137372_11004653	Not Available	581	Open in IMG/M
3300012354\|Ga0137366_10141886	Not Available	1809	Open in IMG/M
3300012355\|Ga0137369_10007825	All Organisms → cellular organisms → Bacteria	10713	Open in IMG/M
3300012355\|Ga0137369_11073156	Not Available	528	Open in IMG/M
3300012360\|Ga0137375_11276197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	556	Open in IMG/M
3300012395\|Ga0134044_1283775	Not Available	546	Open in IMG/M
3300012396\|Ga0134057_1248733	Not Available	724	Open in IMG/M
3300012405\|Ga0134041_1171708	Not Available	559	Open in IMG/M
3300012469\|Ga0150984_104086911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → Roseiflexus castenholzii	1237	Open in IMG/M
3300012469\|Ga0150984_106822668	Not Available	503	Open in IMG/M
3300012469\|Ga0150984_110108029	Not Available	502	Open in IMG/M
3300012469\|Ga0150984_118247399	Not Available	542	Open in IMG/M
3300013306\|Ga0163162_13267755	Not Available	520	Open in IMG/M
3300014833\|Ga0119870_1020737	Not Available	2377	Open in IMG/M
3300015360\|Ga0163144_10005502	All Organisms → cellular organisms → Bacteria	28130	Open in IMG/M
3300015371\|Ga0132258_11818449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1535	Open in IMG/M
3300015371\|Ga0132258_13458589	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1083	Open in IMG/M
3300015374\|Ga0132255_106023356	Not Available	513	Open in IMG/M
3300017792\|Ga0163161_10762929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	810	Open in IMG/M
3300018056\|Ga0184623_10305625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	718	Open in IMG/M
3300018063\|Ga0184637_10418679	Not Available	794	Open in IMG/M
3300018466\|Ga0190268_11855219	Not Available	546	Open in IMG/M
3300019229\|Ga0180116_1082718	Not Available	616	Open in IMG/M
3300019254\|Ga0184641_1068493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1026	Open in IMG/M
3300019255\|Ga0184643_1058758	Not Available	762	Open in IMG/M
3300019269\|Ga0184644_1142560	Not Available	805	Open in IMG/M
3300019269\|Ga0184644_1556451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	564	Open in IMG/M
3300019269\|Ga0184644_1670921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1001	Open in IMG/M
3300019279\|Ga0184642_1490593	Not Available	685	Open in IMG/M
3300020082\|Ga0206353_11579104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	561	Open in IMG/M
3300020180\|Ga0163155_10018777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5545	Open in IMG/M
3300021951\|Ga0222624_1554324	Not Available	787	Open in IMG/M
3300022195\|Ga0222625_1490052	Not Available	514	Open in IMG/M
3300022561\|Ga0212090_10045345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4796	Open in IMG/M
3300025906\|Ga0207699_10608491	Not Available	796	Open in IMG/M
3300025908\|Ga0207643_10806350	Not Available	608	Open in IMG/M
3300025911\|Ga0207654_11042271	Not Available	595	Open in IMG/M
3300025927\|Ga0207687_11165369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	662	Open in IMG/M
3300026095\|Ga0207676_12206676	Not Available	549	Open in IMG/M
3300026116\|Ga0207674_10249808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1721	Open in IMG/M
3300026116\|Ga0207674_12040687	Not Available	538	Open in IMG/M
3300027909\|Ga0209382_11308976	Not Available	734	Open in IMG/M
3300028802\|Ga0307503_10800130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	538	Open in IMG/M
3300030785\|Ga0102757_11283265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1117	Open in IMG/M
3300030829\|Ga0308203_1046768	Not Available	646	Open in IMG/M
3300030829\|Ga0308203_1048994	Not Available	636	Open in IMG/M
3300030829\|Ga0308203_1072645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	555	Open in IMG/M
3300030829\|Ga0308203_1094698	Not Available	506	Open in IMG/M
3300030830\|Ga0308205_1040401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	597	Open in IMG/M
3300030830\|Ga0308205_1056187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	533	Open in IMG/M
3300030902\|Ga0308202_1047242	Not Available	780	Open in IMG/M
3300030903\|Ga0308206_1019165	Not Available	1135	Open in IMG/M
3300030903\|Ga0308206_1051315	Not Available	820	Open in IMG/M
3300030905\|Ga0308200_1153144	Not Available	534	Open in IMG/M
3300030987\|Ga0308155_1000524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1804	Open in IMG/M
3300030988\|Ga0308183_1096322	Not Available	668	Open in IMG/M
3300030988\|Ga0308183_1197853	Not Available	521	Open in IMG/M
3300030990\|Ga0308178_1083408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	654	Open in IMG/M
3300031092\|Ga0308204_10111977	Not Available	767	Open in IMG/M
3300031092\|Ga0308204_10136743	Not Available	714	Open in IMG/M
3300031092\|Ga0308204_10280448	Not Available	551	Open in IMG/M
3300031092\|Ga0308204_10314747	Not Available	528	Open in IMG/M
3300031092\|Ga0308204_10334841	Not Available	516	Open in IMG/M
3300031093\|Ga0308197_10165543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	724	Open in IMG/M
3300031114\|Ga0308187_10320560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	588	Open in IMG/M
3300031114\|Ga0308187_10370396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	558	Open in IMG/M
3300031901\|Ga0307406_11739727	Not Available	553	Open in IMG/M
3300031938\|Ga0308175_101939061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	660	Open in IMG/M
3300031996\|Ga0308176_11672955	Not Available	679	Open in IMG/M
3300032005\|Ga0307411_11378269	Not Available	645	Open in IMG/M
3300032163\|Ga0315281_11313699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	717	Open in IMG/M
3300034681\|Ga0370546_002557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1690	Open in IMG/M
3300034681\|Ga0370546_030623	Not Available	763	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.31%
Host-Associated	Host-Associated	40.00%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.59%
Plants	Host-Associated → Plants	38.62%
Aquatic	Environmental → Aquatic	11.72%
Human	Host-Associated → Human	1.38%
Wastewater	Engineered → Wastewater	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.10%
Freshwater	Environmental → Aquatic → Freshwater	10.34%
Sediment	Environmental → Aquatic → Sediment	1.38%
Digestive System	Host-Associated → Human → Digestive System	1.38%
Roots	Host-Associated → Plants → Roots	1.38%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.62%
Loam	Environmental → Terrestrial → Soil → Loam	9.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.52%
Lake	Environmental → Aquatic → Freshwater → Lake	2.07%
Ice	Environmental → Aquatic → Freshwater → Ice	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.38%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.69%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.52%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.38%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.38%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.69%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	6.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.21%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.45%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.07%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.38%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	1.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.38%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.69%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009686	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012374	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014833	Activated sludge microbial communities from Shanghai, China - wastewater treatment plant - influent sewage	Engineered	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020180	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.SP4.G1	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1202691112	3300002568	Soil	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0058859_117647951	3300004798	Host-Associated	MAAHETAPRYQIGARVRVDKDVMTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0058860_119336761	3300004801	Host-Associated	LSKKFPTMASQETAPRYQIGTRVRVDKEVTTMPALPAYVGIVREIIPSYVDKTIGYNLTLEDDPRPARLWFFLQHQLTPA*
Ga0066673_104775971	3300005175	Soil	IGTRVRVDKEVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0066388_1035809453	3300005332	Tropical Forest Soil	MSSRTMMPHYQPGDRVRVDQEVTTLPALPGRIGIVKEVIPSYADKTIGYNLALEGDPRPDRVWFFLQH
Ga0066388_1066833911	3300005332	Tropical Forest Soil	MPSRQMMPHYKLGDRVRVDKNVTTTLALPGYVGVVKEVIPSYADKTIGYNLALDNDPRPTRVWFFLQDQLRPAER*
Ga0070674_1019516652	3300005356	Miscanthus Rhizosphere	MASHETAPRYQIGTRVRVDKDVTTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0070709_107680511	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPKIIPRYQIGARVRVDKDVTTLPALPAYVGIVKEIIPSYVDKTIGYNLTLDDDPRPGRLWFFLQHQLTPA*
Ga0070700_1001255051	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSANETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0070708_1010844452	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAAHETAPRYQIGARVRVDKDVMTMPALPAYVGIVKEVITSYVDKSTGYNLALEDDPRPSRVWFFFQHQLSPA*
Ga0070708_1018313151	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAPPELSPRYQPGDRVRIDSDVTTTPALPGYVGIVKEVIPSYADKTIGYNLALENDPRPSRVWFFFQDQLK
Ga0070663_1002819501	3300005455	Corn Rhizosphere	MSVQEISPRYQIGDRVRVDKSVMTMPALPTYVGVVREVIPSYVDKATGYNLALDDDPRPGRLWFFLQ
Ga0070663_1007087162	3300005455	Corn Rhizosphere	MASQETAPRYQIGTRVRVDKEVTTMPALPAYVGIVREIIPSYVDKTIGYNLTLEDDPRPARLWFFLQHQLTPA*
Ga0070663_1017330381	3300005455	Corn Rhizosphere	MASHEIAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0070706_1013700502	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSLQEVSPRYRIGERVRVDKGVTTMPALPAYVGIVKEVITSYVDKSTGYNLALDGDPRPSRVWFFFQHQLSPA*
Ga0070698_1021020991	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSSRKMMPHYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDGDPRPERVWFFFQNQLTPA*
Ga0070699_1000926145	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPHYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDGDPRPERVWFFFQNQLTPA*
Ga0070699_1007834302	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSLQEVSPRYRIGERVRVDKGVTTMPALPAYVGIVKEVITSYVDKSTGYNLALEDDPRPSRVWFFFQHQLSPA*
Ga0070697_1008041621	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	HYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDGDPRPERVWFFFQNQLTPA*
Ga0068857_1016347532	3300005577	Corn Rhizosphere	AFVLLSKKFPTMASQETAPRYQIGTRVRVDKEVTTMPALPAYVGIVREIIPSYVDKTIGYNLTLEDDPRPARLWFFLQHQLTPA*
Ga0068870_104644811	3300005840	Miscanthus Rhizosphere	APRYQIGARVRVDKDVMTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0068863_1002671102	3300005841	Switchgrass Rhizosphere	MASQETAPRYQIGARVRVDKEVTTMPALPAYVGIVREIIPSYVDKTIGYNLTLEDDPRPARLWFFLQHQLMPA*
Ga0075362_107172761	3300006177	Populus Endosphere	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEADPRPGRLWFFLQHQLTPA*
Ga0097621_1020927231	3300006237	Miscanthus Rhizosphere	MSANETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQ
Ga0066658_102667263	3300006794	Soil	TMPSQEMSPRYQLGDRVRVDKAVTTIPALPGYVGIVKEVVPSYADKTTGYNLALDNDPRPGRVWFFFQHQLTPA*
Ga0075431_1004360011	3300006847	Populus Rhizosphere	MSYYQRNILTMASHETAARYQIGARVRVDKDVTTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0075431_1004773402	3300006847	Populus Rhizosphere	MGEKIAMPSRTMMPHYQPGDRVRVDQDVTTLPALPGRVGIVKEVIPSYADKTIGYNLALEGDPRPDRVWFFFQHQLTPV*
Ga0075431_1012094052	3300006847	Populus Rhizosphere	MSSRTMMPHYQPGDRVRVDQDVKTLPALPGYVGVVKEVIPSYADKTIGYNLTLEGDPRPDRVWFFFQHQLTPAKG*
Ga0075433_100563695	3300006852	Populus Rhizosphere	MSSHEAVPRYQIGDHVRIDKDVTTMPALPAYVGIVKEIIHSYADKTIGYNLTLDADPRPGRVWFFLQHQLTPA*
Ga0075420_1003829823	3300006853	Populus Rhizosphere	MGEKVAMPSRTMMPHYQPGDRVRVDQDVTTLPALPGRVGIVKEVIPSYADKTIGYNLALEGDPRPDRVWFFFQHQLTPV*
Ga0075434_1010724662	3300006871	Populus Rhizosphere	MSSRTMMPHYQPGDRVRVDQAVTTLPALPGHVGIVKEVIPSYADKTIGYNLALEGDPRPDRVWFFLQNQLTPA*
Ga0079219_119457931	3300006954	Agricultural Soil	MTMASTETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDNTIGYNLALEDDPRPRRLWFFLQQQLTPA*
Ga0111539_102628664	3300009094	Populus Rhizosphere	MSANETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFSQHQLTPA*
Ga0105245_106995561	3300009098	Miscanthus Rhizosphere	TAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0105245_124067021	3300009098	Miscanthus Rhizosphere	MSANETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFL
Ga0075418_110513992	3300009100	Populus Rhizosphere	MMPHYQLGDRVRVDQDVKTLPALPGHVGIVKEVIPSYADKTIGYNLALEGDPRPDRVWFFFQHQLTPV*
Ga0075418_117942962	3300009100	Populus Rhizosphere	MTSHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0114129_102377572	3300009147	Populus Rhizosphere	MMPHYRPGDRVRVDQAVTTLPALPAYIGVVKEVIPSYADKTIGYNLALEGDPRPDRVWFFLQHQLTPA*
Ga0114129_104470605	3300009147	Populus Rhizosphere	MSSRKTLPHYQLGDRVRVDKDVTTTPALPGYVGIVKEVITSYADNTVGYNLALEDDPRPSRVWFFLQHQLTPA*
Ga0114129_104564773	3300009147	Populus Rhizosphere	MSPPEMSPRYQQGDRVHVRKDVTTLPALPGYVGIVKEVIPCYADKTIGYNLTIEGDPRSSRVWFFFQHQLTPA*
Ga0105243_117624401	3300009148	Miscanthus Rhizosphere	MATHELAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLALEDDPRPGRLWFFLQHQLTPA*
Ga0111538_112366232	3300009156	Populus Rhizosphere	MMPHYQPGDRVRVDQAVTTLPALPGHVGIVKEVIPSYADKTIGYNLALEGDPRPDRVWFFLQNQLTPA*
Ga0075423_103603841	3300009162	Populus Rhizosphere	QQGDRVHVRKDVTTLPALPGYVGIVKEVIPCYADKTIGYNLTIEGDPRSSRVWFFFQHQLTPA*
Ga0075423_125783981	3300009162	Populus Rhizosphere	RYRIGERVRIDKGVTTMPALPAYVGIVKEVITSYVDKTTGYNLALEDDPRPSRVWFFFQHQLSPA*
Ga0105249_120592042	3300009553	Switchgrass Rhizosphere	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLALEDDPRPRRLWFFLQQQLTPA*
Ga0123338_100181443	3300009686	Glacier Valley	MASHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTVGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0126307_111874881	3300009789	Serpentine Soil	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLALEDDPRPGRLWFFLQHQLTPA*
Ga0126313_118044952	3300009840	Serpentine Soil	MSSTEAVPRYQIGDRVRVDKDVTTMPALPAYVGIVKEVIHAYADKTIGYNLTLDTDPRPGRVWYFLQHQLQPA*
Ga0126315_110718142	3300010038	Serpentine Soil	TAPRYQIGARVRVNKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0126310_102876183	3300010044	Serpentine Soil	MATHETAPRYQIGARVRVDKDVTTMPELPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0126310_112047661	3300010044	Serpentine Soil	MASHETAPRYPIGTRVRVDKEVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0126311_108512691	3300010045	Serpentine Soil	MATHETAPRYQLGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0126377_127817402	3300010362	Tropical Forest Soil	QLGDRVRVDQDVTTLPALPGRVGIVKEVIPSYADKTIGYNLALDDDPRPARVWFFLQDQLTPAER*
Ga0105239_121485761	3300010375	Corn Rhizosphere	MHPTVKEILAMATNEATPQYQIGARVRIDKNVTTMPALPAYVGIVKEIIPSYVDQTIGYNLALENDPRPRRLWFFLQQQLTPA*
Ga0105239_125915171	3300010375	Corn Rhizosphere	MASQETAPRYQIGTRVRVDKEVTTMPALPAYVGIVREIIPSYVDKTIGYNLTLEDDPRPARLWFFLQH
Ga0134121_126473192	3300010401	Terrestrial Soil	ETAPRYQIGTRVRVDKDVTTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0105246_100723703	3300011119	Miscanthus Rhizosphere	MASHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0126317_105409331	3300011332	Soil	MSANETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLMLEEDPRPGRLWFFLQHQLTP
Ga0137365_113643981	3300012201	Vadose Zone Soil	GDRVRIDSDVTTTPALPGYVRIVKEVIPSYADKTIGYNLALENDPRPSRVWFFFQDQLKSA*
Ga0137374_1000378416	3300012204	Vadose Zone Soil	MICVMAMLLLAEERNDTMTSQKTGHHYQPGDRVRVSKDVTTLPPLPGHVGIVKEIIPSYADKTIGYNISLDDDPRPSRVWFFLQDQLTPA*
Ga0137374_100915901	3300012204	Vadose Zone Soil	MSPRYQPGDRVRVHKDVTTMPALPSYVGIVKEVIPCYEDKTTGYNLTLEDDPRPVRIWFFFERQLTPA*
Ga0137374_101522702	3300012204	Vadose Zone Soil	MASHETAPRYQIGARVRVDKDVTTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0150985_1009442152	3300012212	Avena Fatua Rhizosphere	MASPETAPRYQIGARVRVDKDVTTMPALPAYVGVVKEIIPSYVDKTVGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0150985_1016556732	3300012212	Avena Fatua Rhizosphere	MASHETTPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDNTIGYNLALEDDPRPRRLWFFLQQQLTPA*
Ga0150985_1034688152	3300012212	Avena Fatua Rhizosphere	MASHETAPHYQIGARVRVDKEVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0150985_1066939112	3300012212	Avena Fatua Rhizosphere	MSAQKTLPPYQLGDRVRIDKAVTTMPTLPGYVGIVKEIIPVYADNTTGYNLALENDPRPSRVWFFLQDQLTPA*
Ga0150985_1089386301	3300012212	Avena Fatua Rhizosphere	MATHETAPLYQIGARVRVDKDVTTMPALPAYVGVVKEIIPSYVDKTIGYNLMLEEDPRPGRLWFFLQHQLTPA*
Ga0150985_1172504472	3300012212	Avena Fatua Rhizosphere	MATHETAPRYQIGARVRVDKGVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0150985_1187720732	3300012212	Avena Fatua Rhizosphere	MASPEAAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA*
Ga0137372_110046531	3300012350	Vadose Zone Soil	MSSRKMMPHYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDGDPRPDRVWFFLQHQLTPA*
Ga0137366_101418862	3300012354	Vadose Zone Soil	MAPPELSPRYQPGDRVRIDSDVTTTPALPGYVGIVKEVIPSYADKTIGYNLALENDPRPSRVWFFFQDQLKSA*
Ga0137369_100078253	3300012355	Vadose Zone Soil	MLLLAEERNDTMTSQKTGHHYQPGDRVRVSKDVTTLPPLPGHVGIVKEIIPSYADKTIGYNISLDDDPRPSRVWFFLQDQLTPA*
Ga0137369_110731562	3300012355	Vadose Zone Soil	MASHETAPRYQIGARVRVDKDVTTMPALPEYVGIVKEIIPSYVDKTICYNLSLEEDPRPGRLWFFLQHQLTPA*
Ga0137375_112761971	3300012360	Vadose Zone Soil	MSSAEQAPRYQPGDRVRVDSDLTTTPALPGHIGIVKEVVPSYADKTIGYNLSLENDPRPARVWFFLQHQLKPA*
Ga0134039_10237181	3300012374	Grasslands Soil	MAIMSPISTASARYQVGDRIRVHSDVTTIPALPSFVGTVQEVVPCYADKTIGYNVYLDGDPRPRRSWFFFQHQLTAAADHS*
Ga0134052_13096413	3300012393	Grasslands Soil	MSILSPISTASARYQVGDRVRVHSDVTTIPALPGFVGTVQEVVPCYADKTIGYNVYLDGDPRPRRSWFFFQHQLTAAVDHS*
Ga0134044_12837751	3300012395	Grasslands Soil	MASHETAPRYQIGTRVRVDKDVRTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLEHQLTPA*
Ga0134057_12487331	3300012396	Grasslands Soil	MPGKDFAMSSIKTLQHYQPGDRVRVDKAVTTMPALPGYVGIVKEVIPCYADETIGYNLSIEDDPRSDRVWFFFQHQLTPA*
Ga0134024_11907581	3300012404	Grasslands Soil	MAIMSPISTASARYQVGDRIRVHSDVTTIPALPSFVGTVQEVVPCYADKTIGYNVYLDGDPRPRRSWFFFQHQLTAAVDHS*
Ga0134041_11717081	3300012405	Grasslands Soil	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLEHQLTPA*
Ga0150984_1040869113	3300012469	Avena Fatua Rhizosphere	MCITAAAAQTLWDAMHPTVKEILAMATNEATPQYQIGARVRIDKNVTTMPALPAYVGIVKEIIPSYVDQTIGYNLALENDPRPRRLWFFLQQQLTPA*
Ga0150984_1068226681	3300012469	Avena Fatua Rhizosphere	MATHDTAPRYQIGARVRVDKDVTTMPALPAYIGIVKEIIPSYVDKTIGYNLTLEDDPRSGRLWFFLQHQLTPA*
Ga0150984_1101080291	3300012469	Avena Fatua Rhizosphere	MSSRQMMPHYQLGDRVRVDKDVKTTPALPAYVGIVKEVIPSYADKTIGYNLALDDDPRPERVWFFLQHQLTPAKP*
Ga0150984_1182473992	3300012469	Avena Fatua Rhizosphere	MASHEIAPRYQIGARVRVDKDVTTMPALPAYIGIVKEIIPSYVDKTIGYNLTLEDDPRSGRLWFFLQHQLTPA*
Ga0163162_132677551	3300013306	Switchgrass Rhizosphere	MSANETAPRYQIGARVRVDKGVTTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA*
Ga0119870_10207373	3300014833	Activated Sludge	MSLKEMAPRYQVGDRVSIDKSVTTMPALPAYVGVVQNVVPSYVDKTVGYNLALDGDPRPGRLWFFLQNQLTPA*
Ga0163144_1000550225	3300015360	Freshwater Microbial Mat	MSFQQSTPQFRPGDRVHIDPTVTTLPALPGNVGIVKEVIHSYADHMIGYNLSVENDPRPDRIWFLLQHQLTPA*
Ga0132258_118184494	3300015371	Arabidopsis Rhizosphere	MSSRKMMPHYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDDDPRPGRVWFFFQDQLTPA*
Ga0132258_134585892	3300015371	Arabidopsis Rhizosphere	MSSQNTTPRYQLGDRVRVDEDVTTMPALPTYVGTVREVIPSYVDKTIGYNLALDDDPRPSRVWFFLQHQLTLI*
Ga0132255_1060233562	3300015374	Arabidopsis Rhizosphere	LLSKKFPTMASQETAPRYQIGTRVRVDKEVTTMPALPAYVGIVREIIPSYVDKTIGYNLTLEDDPRPARLWFFLQHQLTPA*
Ga0163161_107629291	3300017792	Switchgrass Rhizosphere	MAAHETAPRYQIGARVRVDKDVMTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0184623_103056252	3300018056	Groundwater Sediment	MASHETAPRYQIGARVRVHKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRRGRLWFFLQHQLTPA
Ga0184637_104186791	3300018063	Groundwater Sediment	MASHETAPRYQIGARVRVHKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA
Ga0190268_118552192	3300018466	Soil	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRRGRLWFFLQHQLTPA
Ga0180116_10827181	3300019229	Groundwater Sediment	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0184641_10684932	3300019254	Groundwater Sediment	MALHETAPRYQIGTRVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRRGRLWFFLQHQLTPA
Ga0184643_10587581	3300019255	Groundwater Sediment	MASHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0184644_11425601	3300019269	Groundwater Sediment	MASHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRSGRLWFFLQHQLTPA
Ga0184644_15564512	3300019269	Groundwater Sediment	MASLKTSPQYQPGDRVRVDKDVTTIPALPGYVGTVKEVVPCYADRTIGYNLALEDDPRPDRVWFFLQHQLRPA
Ga0184644_16709212	3300019269	Groundwater Sediment	MALHETAPRYQIGTRVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA
Ga0184642_14905932	3300019279	Groundwater Sediment	MSLQEVSPRYRIGERVRIDKGVTTMPAMPAYVGIVKEVITSYVDKSTGYNLALDGDPRPSRVWFFFQHQLSPA
Ga0206353_115791041	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	DRAMLPPETTPRYQQGDRVHVSKDVTTLPALPGYVGIVKEVIPCYADKTIGYNLAIEGDPRPSRVWFFFQQQLTPAYAGESERDPS
Ga0163155_1001877711	3300020180	Freshwater Microbial Mat	MSFQQSTPQFRPGDRVHIDPTVTTLPALPGNVGIVKEVIHSYADHMIGYNLSVENDPRPDRIWFLLQHQLTPA
Ga0222624_15543241	3300021951	Groundwater Sediment	MASHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA
Ga0222625_14900521	3300022195	Groundwater Sediment	AQSPWDTFVPLSKKFLTMASPAIAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSFVDNTIGYNLALEDDPRPKRLWFFLQQQLTPA
Ga0212090_100453452	3300022561	Glacier Valley	MASHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTVGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0207699_106084911	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPKIIPRYQIGARVRVDKDVTTLPALPAYVGIVKEIIPSYVDKTIGYNLTLDDDPRPGRLWFFLQHQLTPA
Ga0207643_108063501	3300025908	Miscanthus Rhizosphere	HETAPRYQIGARVRVDKDVMTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0207654_110422711	3300025911	Corn Rhizosphere	MSANETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0207687_111653692	3300025927	Miscanthus Rhizosphere	MASQETAPRYQIGTRVRVDKEVTTMPALPAYVGIVREIIPSYVDKTIGYNLTLEDDPRPARLWFFLQHQLTPA
Ga0207676_122066761	3300026095	Switchgrass Rhizosphere	MATHETAPRYQIGARVRVDKGVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0207674_102498081	3300026116	Corn Rhizosphere	MHPTVKEILAMATNEATPQYQIGARVRIDKNVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0207674_120406871	3300026116	Corn Rhizosphere	IGARVRVDKDVTTLPALPAYVGIVKEIIPSYVDKTIGYNLTLDDDPRPGRLWFFLQHQLTPA
Ga0209382_113089761	3300027909	Populus Rhizosphere	MSYYQRNILTMASHETAARYQIGARVRVDKDVTTMPALPTYVGIVKEVIPSYVDKTIGYNLALDGDPRPTRVWFFLQHQLTPA
Ga0307503_108001301	3300028802	Soil	GARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTP
Ga0102757_112832652	3300030785	Soil	MASHETAPRYQIGARVRVDKDVTTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA
Ga0308203_10467681	3300030829	Soil	MASHESAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0308203_10489941	3300030829	Soil	MASHETAPRYQIGTRVRVDKDVTTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA
Ga0308203_10726451	3300030829	Soil	RYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEADPRPGRLWFFLQHQLTPA
Ga0308203_10946981	3300030829	Soil	MMPHYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDGDPRPERVWFFFQNQLTPA
Ga0308205_10404011	3300030830	Soil	KEQNHGTHTSYYKRNILTMASHQTAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRRGRLWFFLQHQLTPA
Ga0308205_10561872	3300030830	Soil	YQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0308202_10472421	3300030902	Soil	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLALEDDPRPRRLWFFLQQQLTPA
Ga0308206_10191651	3300030903	Soil	ETTPRYQIGARVRVDKDVMTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0308206_10513152	3300030903	Soil	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEADPRPGRLWFFLQHQLTPA
Ga0308200_11531441	3300030905	Soil	MATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPG
Ga0308155_10005241	3300030987	Soil	MPHYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDGDPRPERVWFFFQNQLTPA
Ga0308183_10963221	3300030988	Soil	MATHETAPLYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0308183_11978531	3300030988	Soil	MSAQKTLAPYQLGDRVRVDKAVTTMPSLPGYVGIVKEIIPVYADNTTGYNLALDNDPRPSRVWFFLQDQLTPA
Ga0308178_10834083	3300030990	Soil	MASLKTSPQYQPGDRVRVDKDVTTIPPLPGYVGTVKEVVPCYGDQTIGYNLALEDDPRPDRVWFFLQHQLRPA
Ga0308204_101119771	3300031092	Soil	MASHETAPRYQIGTRVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0308204_101367431	3300031092	Soil	MATHETAPRYQLGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0308204_102804481	3300031092	Soil	MASHQTAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEDDPRSGRLWFFLQHQLTPA
Ga0308204_103147472	3300031092	Soil	MVSKNIMPHYQLGDRVRVDKDVTTIPALPGYVGIVKEVIPCYADETIGYNVTLEDDPRTGRVWFFLQNQLRTA
Ga0308204_103348411	3300031092	Soil	MALEKTLPQYQPGDRVRINKDVTTMPALPGYVGIVKEVIPVYADKTTGYNLSLEEDPRPSRTWFFLEHQLTRA
Ga0308197_101655431	3300031093	Soil	MSSRKMMPHYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDGDPRPERVWFFFQNQLTPA
Ga0308187_103205601	3300031114	Soil	HETAARYQIGARVRVDKDVTTMPALPTYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0308187_103703962	3300031114	Soil	MASLKTSPQYQPGDRVRVDKDVTTIPPLPGYVGTVKEVVPCYADRTMGYNLALEDDPRPDRVWFFLQHQLRPA
Ga0307406_117397271	3300031901	Rhizosphere	MSSRTMMPHYRPGDRVRIDQEVTTLPALPGRVGIVKEVIPSYADKTIGYNLTLEGDPRPERIWFFFQHQLTPA
Ga0308175_1019390611	3300031938	Soil	KKCSIMATHETAPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVDKTIGYNLTLEEDPRPGRLWFFLQHQLTPA
Ga0308176_116729552	3300031996	Soil	MASPEAVPRYQIGARVRVDKDVTTMPALPAYVGIVKEIIPSYVVNSIGYNLALEDDPRPRRLWFFLQQQLTPA
Ga0307411_113782693	3300032005	Rhizosphere	MPPQDMAPRYQIGDRVRVDKAVTTMPALPGYVGVVHDIIPSYVDKTVGYNLTLDDDPRPGRTWFFLQSQLSPA
Ga0315281_113136991	3300032163	Sediment	MAAQETAPRYQIGARVRVDKGVTTMPALPAYVGIVKDIIPSYVDKTIGYNLTLEDDPRPGRLWFFLQHQLTPA
Ga0370546_002557_3_197	3300034681	Soil	MSSRKMMPHYKHGDRVRVDKAVTTLPALPGYVGIVKEVIPSYADQTIGYNLSLDGDPRPERVWFF
Ga0370546_030623_138_359	3300034681	Soil	MSLQEVSPRYRIGERVRIDKGVTTMPAMPAYVGIVKEVITSYVDKSTGYNLALEDDPRPSRVWFFFQHQLSPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050485

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences