Metagenome / Metatranscriptome Family F050433

Basic Information
Family ID	F050433
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	45 residues
Representative Sequence	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRASE
Number of Associated Samples	122
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.59 %
% of genes near scaffold ends (potentially truncated)	99.31 %
% of genes from short scaffolds (< 2000 bps)	88.28 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Most Common Taxonomy
Group	Bacteria (88.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.552 % of family members)
Environment Ontology (ENVO)	Unclassified (41.379 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.517 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.06% β-sheet: 0.00% Coil/Unstructured: 56.94%
Feature Viewer

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Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF03575	Peptidase_S51	6.90
PF01872	RibD_C	2.76
PF13669	Glyoxalase_4	2.76
PF06224	HTH_42	2.07
PF13302	Acetyltransf_3	2.07
PF13649	Methyltransf_25	2.07
PF02597	ThiS	2.07
PF13238	AAA_18	1.38
PF07690	MFS_1	1.38
PF13442	Cytochrome_CBB3	1.38
PF07883	Cupin_2	1.38
PF08241	Methyltransf_11	1.38
PF12681	Glyoxalase_2	1.38
PF07676	PD40	1.38
PF07876	Dabb	1.38
PF00248	Aldo_ket_red	1.38
PF00583	Acetyltransf_1	1.38
PF09348	DUF1990	0.69
PF02152	FolB	0.69
PF13450	NAD_binding_8	0.69
PF00069	Pkinase	0.69
PF02518	HATPase_c	0.69
PF12840	HTH_20	0.69
PF12697	Abhydrolase_6	0.69
PF01725	Ham1p_like	0.69
PF06351	Allene_ox_cyc	0.69
PF00361	Proton_antipo_M	0.69
PF07508	Recombinase	0.69
PF01098	FTSW_RODA_SPOVE	0.69
PF13539	Peptidase_M15_4	0.69
PF00814	TsaD	0.69
PF12389	Peptidase_M73	0.69
PF14378	PAP2_3	0.69
PF00278	Orn_DAP_Arg_deC	0.69
PF08245	Mur_ligase_M	0.69
PF08818	DUF1801	0.69
PF01177	Asp_Glu_race	0.69
PF03364	Polyketide_cyc	0.69
PF01641	SelR	0.69
PF00903	Glyoxalase	0.69
PF03167	UDG	0.69
PF13476	AAA_23	0.69
PF14362	DUF4407	0.69
PF09900	DUF2127	0.69
PF01022	HTH_5	0.69
PF02607	B12-binding_2	0.69
PF02371	Transposase_20	0.69
PF00392	GntR	0.69
PF08327	AHSA1	0.69
PF00211	Guanylate_cyc	0.69
PF03144	GTP_EFTU_D2	0.69
PF06745	ATPase	0.69
PF04828	GFA	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.76
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.76
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	2.07
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	2.07
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	2.07
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.69
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.69
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.69
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.69
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.69
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.69
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.69
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.69
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.69
COG1539	Dihydroneopterin aldolase	Coenzyme transport and metabolism [H]	0.69
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	0.69
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.69
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	0.69
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.69
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	0.69
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.90 %
Unclassified	root	N/A	11.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.07 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57.24 %
Unclassified	root	N/A	11.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.07 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.38 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	24.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.24 %
Unclassified	root	N/A	11.03 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.38 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.69 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.69 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.69 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	23.45 %
Unclassified	root	N/A	11.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.97 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.38 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.69 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.69 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.69 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	23.45 %
Unclassified	root	N/A	11.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.97 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.38 %
unclassified Thermomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales	0.69 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.69 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.69 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.69 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	23.45 %
Unclassified	root	N/A	11.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.97 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.38 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.69 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.69 %
Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	0.69 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.69 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	23.45 %
Unclassified	root	N/A	11.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.97 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.38 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.69 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.69 %
Paenibacillus dendritiformis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus dendritiformis	0.69 %
Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	0.69 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	23.45 %
Unclassified	root	N/A	11.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.97 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.38 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.69 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.69 %
Paenibacillus dendritiformis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus dendritiformis	0.69 %
Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	0.69 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig15081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
2170459009\|GA8DASG01AIV6K	Not Available	504	Open in IMG/M
3300000891\|JGI10214J12806_12429720	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300000955\|JGI1027J12803_108073518	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300000956\|JGI10216J12902_105809236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1004	Open in IMG/M
3300000956\|JGI10216J12902_108787167	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300000956\|JGI10216J12902_109150951	Not Available	635	Open in IMG/M
3300001535\|A3PFW1_10089681	Not Available	1590	Open in IMG/M
3300001535\|A3PFW1_10146198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5004	Open in IMG/M
3300004114\|Ga0062593_101049570	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300004157\|Ga0062590_101121857	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005093\|Ga0062594_101502715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	691	Open in IMG/M
3300005181\|Ga0066678_10981445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	549	Open in IMG/M
3300005327\|Ga0070658_11358378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	617	Open in IMG/M
3300005338\|Ga0068868_100785942	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005340\|Ga0070689_100475307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1067	Open in IMG/M
3300005347\|Ga0070668_100652636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300005354\|Ga0070675_102122004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	518	Open in IMG/M
3300005366\|Ga0070659_101530535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus dendritiformis	595	Open in IMG/M
3300005366\|Ga0070659_101562872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300005437\|Ga0070710_10010869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4482	Open in IMG/M
3300005439\|Ga0070711_100797347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300005444\|Ga0070694_101852405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005468\|Ga0070707_100565988	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005618\|Ga0068864_101794230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300005718\|Ga0068866_10424051	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005764\|Ga0066903_100338978	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300005764\|Ga0066903_100724860	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300005764\|Ga0066903_108453731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	525	Open in IMG/M
3300006237\|Ga0097621_102132397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	536	Open in IMG/M
3300006358\|Ga0068871_101997206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	552	Open in IMG/M
3300006575\|Ga0074053_12016026	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300006578\|Ga0074059_11905875	All Organisms → cellular organisms → Bacteria → Terrabacteria group	782	Open in IMG/M
3300006579\|Ga0074054_10014164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	658	Open in IMG/M
3300006881\|Ga0068865_102180165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300006954\|Ga0079219_12002815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300007076\|Ga0075435_100033590	All Organisms → cellular organisms → Bacteria	4058	Open in IMG/M
3300007255\|Ga0099791_10270336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	808	Open in IMG/M
3300009093\|Ga0105240_10988496	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300009093\|Ga0105240_12703471	Not Available	512	Open in IMG/M
3300009098\|Ga0105245_10375154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1415	Open in IMG/M
3300009098\|Ga0105245_11942797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	642	Open in IMG/M
3300009101\|Ga0105247_10035427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3042	Open in IMG/M
3300009101\|Ga0105247_11522942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	546	Open in IMG/M
3300009137\|Ga0066709_101111377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1162	Open in IMG/M
3300009148\|Ga0105243_10988886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300009148\|Ga0105243_11683665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300009162\|Ga0075423_10906512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	935	Open in IMG/M
3300009176\|Ga0105242_10218582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1702	Open in IMG/M
3300009176\|Ga0105242_11968855	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009545\|Ga0105237_11446989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300009551\|Ga0105238_11389725	Not Available	729	Open in IMG/M
3300009840\|Ga0126313_11191277	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300010036\|Ga0126305_10810274	Not Available	637	Open in IMG/M
3300010037\|Ga0126304_10003019	All Organisms → cellular organisms → Bacteria	8414	Open in IMG/M
3300010040\|Ga0126308_11290230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	519	Open in IMG/M
3300010042\|Ga0126314_10111074	Not Available	1874	Open in IMG/M
3300010166\|Ga0126306_10045832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	3012	Open in IMG/M
3300010323\|Ga0134086_10175612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	791	Open in IMG/M
3300010326\|Ga0134065_10318241	Not Available	601	Open in IMG/M
3300010335\|Ga0134063_10407922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	667	Open in IMG/M
3300010360\|Ga0126372_12963292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300010366\|Ga0126379_10519829	Not Available	1265	Open in IMG/M
3300010371\|Ga0134125_12668189	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300010375\|Ga0105239_10412037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1530	Open in IMG/M
3300010375\|Ga0105239_13012886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	549	Open in IMG/M
3300010375\|Ga0105239_13222068	Not Available	531	Open in IMG/M
3300010399\|Ga0134127_11166449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300010399\|Ga0134127_12495857	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300011003\|Ga0138514_100007933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1656	Open in IMG/M
3300011003\|Ga0138514_100061296	Not Available	775	Open in IMG/M
3300011119\|Ga0105246_10371893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1178	Open in IMG/M
3300011119\|Ga0105246_12330918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	524	Open in IMG/M
3300012011\|Ga0120152_1038919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1612	Open in IMG/M
3300012198\|Ga0137364_10573841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300012353\|Ga0137367_10819631	Not Available	645	Open in IMG/M
3300012357\|Ga0137384_10324528	Not Available	1278	Open in IMG/M
3300012359\|Ga0137385_11594532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	517	Open in IMG/M
3300012493\|Ga0157355_1015127	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012507\|Ga0157342_1078114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	516	Open in IMG/M
3300012892\|Ga0157294_10203554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300012955\|Ga0164298_10417321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300012958\|Ga0164299_11060669	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300012960\|Ga0164301_10625856	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300012960\|Ga0164301_11453136	Not Available	563	Open in IMG/M
3300012961\|Ga0164302_10503591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300012971\|Ga0126369_11455124	Not Available	775	Open in IMG/M
3300012984\|Ga0164309_11823208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	522	Open in IMG/M
3300012987\|Ga0164307_10053001	All Organisms → cellular organisms → Bacteria	2339	Open in IMG/M
3300012987\|Ga0164307_10982941	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012988\|Ga0164306_11594296	All Organisms → cellular organisms → Bacteria → Terrabacteria group	563	Open in IMG/M
3300012989\|Ga0164305_11026588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300013102\|Ga0157371_10050188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2964	Open in IMG/M
3300013104\|Ga0157370_10419180	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300013105\|Ga0157369_11010988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	851	Open in IMG/M
3300013297\|Ga0157378_11610159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300013306\|Ga0163162_12375746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	609	Open in IMG/M
3300014326\|Ga0157380_13320961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	514	Open in IMG/M
3300015077\|Ga0173483_10009972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3232	Open in IMG/M
3300015371\|Ga0132258_11173829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1941	Open in IMG/M
3300015371\|Ga0132258_12678314	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300015372\|Ga0132256_100112517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2671	Open in IMG/M
3300015373\|Ga0132257_100906375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1105	Open in IMG/M
3300015373\|Ga0132257_102337139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	693	Open in IMG/M
3300015374\|Ga0132255_100277181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2405	Open in IMG/M
3300015374\|Ga0132255_101327111	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300015374\|Ga0132255_105940996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	516	Open in IMG/M
3300017792\|Ga0163161_10224055	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300018072\|Ga0184635_10048309	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300019361\|Ga0173482_10284608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300019867\|Ga0193704_1039845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300020082\|Ga0206353_10774360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2742	Open in IMG/M
3300022901\|Ga0247788_1125239	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300023266\|Ga0247789_1085395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	615	Open in IMG/M
3300025908\|Ga0207643_10072012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1990	Open in IMG/M
3300025918\|Ga0207662_10200102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1293	Open in IMG/M
3300025921\|Ga0207652_10992832	All Organisms → cellular organisms → Bacteria → Terrabacteria group	738	Open in IMG/M
3300025924\|Ga0207694_10843024	All Organisms → cellular organisms → Bacteria → Terrabacteria group	775	Open in IMG/M
3300025933\|Ga0207706_11100893	All Organisms → cellular organisms → Bacteria → Terrabacteria group	664	Open in IMG/M
3300025934\|Ga0207686_11739460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	516	Open in IMG/M
3300025944\|Ga0207661_11808814	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300026078\|Ga0207702_11303703	All Organisms → cellular organisms → Bacteria → Terrabacteria group	720	Open in IMG/M
3300026995\|Ga0208761_1034740	All Organisms → cellular organisms → Bacteria → Terrabacteria group	517	Open in IMG/M
3300027478\|Ga0207448_101552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	667	Open in IMG/M
3300028597\|Ga0247820_11404048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	509	Open in IMG/M
3300028708\|Ga0307295_10000571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7860	Open in IMG/M
3300028714\|Ga0307309_10204550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	521	Open in IMG/M
3300028715\|Ga0307313_10019625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1825	Open in IMG/M
3300028744\|Ga0307318_10067648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300028771\|Ga0307320_10035985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1810	Open in IMG/M
3300028784\|Ga0307282_10051326	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300028812\|Ga0247825_11011763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	604	Open in IMG/M
3300028875\|Ga0307289_10000855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13254	Open in IMG/M
3300028885\|Ga0307304_10403666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	617	Open in IMG/M
3300031226\|Ga0307497_10019371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2075	Open in IMG/M
3300031226\|Ga0307497_10196594	All Organisms → cellular organisms → Bacteria → Terrabacteria group	871	Open in IMG/M
3300031573\|Ga0310915_11160227	Not Available	535	Open in IMG/M
3300031671\|Ga0307372_10440050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300031713\|Ga0318496_10567896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300031731\|Ga0307405_11554297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300031736\|Ga0318501_10123344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1313	Open in IMG/M
3300031908\|Ga0310900_10508459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	937	Open in IMG/M
3300031996\|Ga0308176_10689360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1059	Open in IMG/M
3300032013\|Ga0310906_10236073	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300032126\|Ga0307415_101183984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.45%
Host-Associated	Host-Associated	36.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.76%
Plants	Host-Associated → Plants	36.55%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.03%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.38%
Roots	Host-Associated → Plants → Roots	1.38%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.31%
Loam	Environmental → Terrestrial → Soil → Loam	7.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Clay	Environmental → Terrestrial → Soil → Clay	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.07%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.38%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.07%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.38%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.38%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.38%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027478	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-E (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050433

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00091120	2166559006	Grass Soil	LPAVAEGVVIRPEREADHPAIADVVRAAFVRHPDEVASFVEAIRAS
F47_07460690	2170459009	Grass Soil	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVVSFLERIRASEQFITELALV
JGI10214J12806_124297201	3300000891	Soil	VADAVLIRPERETDHPAIAEVVRAAFVEHPDEVASFVERIRASEQF
JGI1027J12803_1080735181	3300000955	Soil	VVEGVVIRPERDADCPVIAEVVRAAFVGHPDEVASFVER
JGI10216J12902_1058092364	3300000956	Soil	VPELASPLVAEGVVIRAECDADHPVIAEVVRAAFVGHADEVASFVERIRASEQF
JGI10216J12902_1087871672	3300000956	Soil	VAEGVVIRSERDGDHSVIAEVVRAAFVGQPDEVGLFVQRIRASEQFIPELALVAE
JGI10216J12902_1091509511	3300000956	Soil	VAEGVVIRPECDTDHPAIAEVVRAAFVRHPDEVASFVERIRASEQ
A3PFW1_100896813	3300001535	Permafrost	VPQLPSPPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVE
A3PFW1_101461981	3300001535	Permafrost	MAEGVVVRPERDADHPVIAEVIRAAFVGHPDEVASFVE
Ga0062593_1010495702	3300004114	Soil	VERPESEDVVIRAERDADQPVIAEVVRAAFAGHPDEVASFVERIRGSEQFI
Ga0062590_1011218572	3300004157	Soil	VADCVVIRPERDADYPRIAEVIRAAFVGHPDEVASFVERIRASEQFIPELAL
Ga0062594_1015027151	3300005093	Soil	VIEGLVIRPERDADHAVIAEVVGAAFVNHPDDEVASFVERIRASE
Ga0066678_109814451	3300005181	Soil	VAEGVVIRPERDADHPVIAELVRAAFVGHPDEVASFVERIRASEQ
Ga0070658_113583782	3300005327	Corn Rhizosphere	VTDEIVIRPERDADHAVIADVVRGAFIRHPDEVALFVERIRASEHYIP
Ga0068868_1007859421	3300005338	Miscanthus Rhizosphere	VPRLPSPPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASF
Ga0070689_1004753071	3300005340	Switchgrass Rhizosphere	VIEGLVIRPERDADHAVIAEVVGAAFVNHPDDEVASFVER
Ga0070668_1006526362	3300005347	Switchgrass Rhizosphere	VAEGVVIRPEREADHPVIAEVVRAAFVGHPREVASFVERIRESDQSIPELALV
Ga0070675_1021220041	3300005354	Miscanthus Rhizosphere	VAEGVVIRPEREADHPVIAEVVRAAFDGHPDEVASFVERIRASEQFV
Ga0070659_1015305351	3300005366	Corn Rhizosphere	LAGVRDNYHRVAEGIVIRPECDADHPAIAEVVGAAFVGHPDEVVSFVERIRASEQFIPELALVAED
Ga0070659_1015628722	3300005366	Corn Rhizosphere	VADGVVIRPECDADRSVIAEVVRAAFVRHPDEVASFVERLRASEHFIPEF
Ga0070710_100108697	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VAEGVVIRPERDADQSVIAEVVRAAFVRHPDEVASFVERIRASEHF
Ga0070711_1007973473	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VIEGLVIRPERDADHAVIAEVVRAAFVRHPDEVAEFVERIRASEH
Ga0070694_1018524051	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VPRLPSPPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRASEQF
Ga0070707_1005659883	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRASEQFIP
Ga0068864_1017942302	3300005618	Switchgrass Rhizosphere	VADDLLIRPERAADHPAIADVVRAAFARQPHEVAAFVER
Ga0068866_104240511	3300005718	Miscanthus Rhizosphere	VAGGANGVPRLPSPPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVE
Ga0066903_1003389781	3300005764	Tropical Forest Soil	MAEGVVIRPEREADHPVIAEVVRAAFVGHPDEVASFVERIR
Ga0066903_1007248601	3300005764	Tropical Forest Soil	VVEGVVIRTECDADHPVIAEVVRAAFVGHPDEVASFVER
Ga0066903_1084537312	3300005764	Tropical Forest Soil	VAEGVVIRPEREADHAVIGEVVRAAFVSHPDEVASFVERIRASEQF
Ga0097621_1021323971	3300006237	Miscanthus Rhizosphere	VAEGVVIRPERDADHPVIAEVVSAAFVRQPDEVPAFVERIRASEQF
Ga0068871_1019972063	3300006358	Miscanthus Rhizosphere	VADGVVIRPERDADHPVIADVVRAAFDQHPDDVAAFVERIR
Ga0074053_120160262	3300006575	Soil	VIRPERDADHSVIAEVVRAAFVGHPDEVASFVERIRASEQ
Ga0074059_119058751	3300006578	Soil	MGECVVIRPERATDHPVIAEVVRAAFAGQDPDDVASFVERIRASEQFIPELA
Ga0074054_100141641	3300006579	Soil	VPQLPSPPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVA
Ga0068865_1021801651	3300006881	Miscanthus Rhizosphere	VAEDLVIRPERAADHDAIAEVVRAAFVEHPDEVAT
Ga0079219_120028152	3300006954	Agricultural Soil	VISHLPVAESVVIRPEREADHRVIADVVRAAFVRHPD
Ga0075435_1000335905	3300007076	Populus Rhizosphere	MPRLPSPAVAEGVVIRPERVADHPVIAEVVRAAFVGHPDEVASF
Ga0099791_102703362	3300007255	Vadose Zone Soil	VAEGVVIRPERDADHSSIAEVVRAAFVGHPDEVASFVERIRASEQSPVVLARK*
Ga0105240_109884961	3300009093	Corn Rhizosphere	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRASEQF
Ga0105240_127034712	3300009093	Corn Rhizosphere	VADRLLIRPEREADHSAIAEVVRAAFIRQPDEVAAFFERI
Ga0105245_103751541	3300009098	Miscanthus Rhizosphere	VAEGVVIRPEREADHPVIAEVVRAAFVGHPHEVASFVERIRESDQSIPELAF
Ga0105245_119427971	3300009098	Miscanthus Rhizosphere	VAEDVVIRPERDADHPLIADVVRAAFDQHPDDVAAFVERI
Ga0105247_100354271	3300009101	Switchgrass Rhizosphere	VAEGVVIRPEREADHPAIAEVVRAAFVGHPEEVAS
Ga0105247_115229421	3300009101	Switchgrass Rhizosphere	VADGVVIRPECDADRSVIAEVVRAAFVGQPDEVALFV
Ga0066709_1011113771	3300009137	Grasslands Soil	VSFSVDRRVLDESLVIRPEREADGPAIAEVVRAAFVTHPDEVASFVERIRASEQFVPQLALVAEDA
Ga0105243_109888861	3300009148	Miscanthus Rhizosphere	VAEDLVIRPERAADHDAIAEVVRAAFVEHPDEVATFVERIRAS
Ga0105243_116836651	3300009148	Miscanthus Rhizosphere	LAGVRDNYHRVAEGIVIRPECDADHPAIAEVVGAAFVGHPDEVVSFVERIRASEQFIPEL
Ga0075423_109065122	3300009162	Populus Rhizosphere	VAEGVVIRPERVADHPVIAEVVRAAFVGHPDEVASFVERIRASERFIPE
Ga0105242_102185821	3300009176	Miscanthus Rhizosphere	VAEGVVIRPERDADHPVIAEVVSAAFVRQPDVPAF
Ga0105242_119688551	3300009176	Miscanthus Rhizosphere	VAEGVVIRSERDGDHSVIAEVVRAAFVGQPDEVALFVQR
Ga0105237_114469892	3300009545	Corn Rhizosphere	VAEAVVIRPERDADQLVIAEVVRAAFVGHPDKVASFVERIRSSEEFIPELALVAE
Ga0105238_113897251	3300009551	Corn Rhizosphere	VAEGVVIRPERDADHPAIAKVVRAAFVEHPDEVASFVERIRASEQF
Ga0126313_111912772	3300009840	Serpentine Soil	VAEVVVSRPERDADRLVIADVVRAAFIGHPDEVASFVERIRAS
Ga0126305_108102741	3300010036	Serpentine Soil	VSEDVVIRPERHKDHRVIADVVRAAFVEHPDEVASF
Ga0126304_100030191	3300010037	Serpentine Soil	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVVSFVER
Ga0126308_112902302	3300010040	Serpentine Soil	VAESVVVRPERDADHPVIAEVVRAAFVGHPDEVVSFVER
Ga0126314_101110742	3300010042	Serpentine Soil	VTADGLVVRPERDADHAAIAEVVRAAFVGHPDEVASFVERIRVSEQFIPE
Ga0126306_100458321	3300010166	Serpentine Soil	MSPEARTACPNYHRTVAEGIVIRPERDADHPVIAEVVHAAFVGHPDEVVSFVERIRA
Ga0134086_101756121	3300010323	Grasslands Soil	IRPERDADHPAIAEVVRAAFVEHPDEVASFVERIRASDRPV*
Ga0134065_103182412	3300010326	Grasslands Soil	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERI
Ga0134063_104079221	3300010335	Grasslands Soil	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRVSEQFI
Ga0126372_129632921	3300010360	Tropical Forest Soil	VVEGVVIRTECDADHPVIAEVVGAAFVGHPDEVVSFVEGIRASEQFI
Ga0126379_105198294	3300010366	Tropical Forest Soil	MANGVVIRPERKADYPRITEVVRAAFVRHPDEVASFV
Ga0134125_126681892	3300010371	Terrestrial Soil	VAESVVIRPERDADHPVIAEVVRAAFAGHPAEVASFVER
Ga0105239_104120371	3300010375	Corn Rhizosphere	VAERLVIRPQRDADRDAIAEVVRAAFVGDGDEVAAFAERIQASE
Ga0105239_130128861	3300010375	Corn Rhizosphere	VADGVVIRPECDADRSVIAEVVRAAFVRHPDEVASFVERLRASEHFIPEFALVAED
Ga0105239_132220681	3300010375	Corn Rhizosphere	MSSVVIRPERGADHPVIAEVVRAAFVRHPDEVASFV
Ga0134127_111664492	3300010399	Terrestrial Soil	VADGVVIRLECDADHPAIAEVVGAAFVGHPDAVVSFVERIRASEQFIPELAFVAEDPSGL
Ga0134127_124958571	3300010399	Terrestrial Soil	VADGVVIRPERHADHPGIAELVRAAFVGHPDEVASFVERI
Ga0138514_1000079331	3300011003	Soil	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRASEQFIPE
Ga0138514_1000612962	3300011003	Soil	VAEGVVIRPERDADHPGIAEVVRAAFVGHPDEVASFVERIRASEQFIPE
Ga0105246_103718931	3300011119	Miscanthus Rhizosphere	VAEGVVIRPEREVDHPVIAEVVRAAFVGHPREVASFVERIRESHQFIPELA
Ga0105246_123309182	3300011119	Miscanthus Rhizosphere	VAEGVVIRPERDADHPAIAEVVRAAFVGHPDEVASF
Ga0120152_10389191	3300012011	Permafrost	VAEGVVIRPERDADHPAIAEVVRAAFVRHPDEVATFVDRIRASEQFIP
Ga0137364_105738412	3300012198	Vadose Zone Soil	VAEGLVIRPECDADHPVIAEVVRSAFVKHPDEVASFVERIRASEQFV
Ga0137367_108196312	3300012353	Vadose Zone Soil	MTPDYHRHPPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRA
Ga0137384_103245282	3300012357	Vadose Zone Soil	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRASE
Ga0137385_115945321	3300012359	Vadose Zone Soil	VAEGVVTRPERDAAHPVIAEVVRAAFVGHPDEVASFVE
Ga0157355_10151272	3300012493	Unplanted Soil	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRASGQFIPE
Ga0157342_10781142	3300012507	Arabidopsis Rhizosphere	VAEGVVIRPEREADHPVIAEVVRAAFDGHPDEVASFVERIR
Ga0157294_102035541	3300012892	Soil	VKAVDRSVAEGVVIRRERDADHPVIAEVVRAAFVGHPREVAS
Ga0164298_104173211	3300012955	Soil	VAEGVLIRPDRDADRPVIAEVVRAAFVGHPDEVASFVERIRASEQF
Ga0164299_110606692	3300012958	Soil	VVDGVVIRPEREPDHAVIAEVVRAAFVGHPDEVASFVERIRAS
Ga0164301_106258561	3300012960	Soil	VVEGVVIRPECDADHPVIAEVVRAAFVGHPDEVASFVERIRASEQFIPE
Ga0164301_114531361	3300012960	Soil	VAEGIVIRPERDADHLAIAEVVRAAFVEHPDEVAAFVERI
Ga0164302_105035913	3300012961	Soil	VAEGVVIRPERDADHSAIAEVVRAAFVGHPDEVASFV
Ga0126369_114551243	3300012971	Tropical Forest Soil	VAEDIHLRPECDADHPAIAKVVRAAFAGHPEEVAAFVERI
Ga0164309_118232081	3300012984	Soil	VAEGVVIRPERDADHPVITEVVRAAFVGHPDDVASFVE
Ga0164307_100530014	3300012987	Soil	VVEGVVIRPECDADHPVIAEVVRAAFVGHPDEVASFVE
Ga0164307_109829412	3300012987	Soil	VAEGVVIRPEREPDHPVIAEVVRAAFVGHPDEVASFVERIRAS
Ga0164306_115942961	3300012988	Soil	VADGVVIRPERDADHPAIAEVVRAAFVGHPDEVAAFVERIRASEQF
Ga0164305_110265881	3300012989	Soil	VAKGVVIRPERDADHPVIAEVVRAAFVEHPDEVASF
Ga0157371_100501885	3300013102	Corn Rhizosphere	VAEGVVIRPERHADHPGIAELVRAAFVGHPDEVASFVERIR
Ga0157370_104191803	3300013104	Corn Rhizosphere	VAEDVVIRPECEEDRLAVGEVVRAAFVRHPDQVASLVERILASDGSTP
Ga0157369_110109881	3300013105	Corn Rhizosphere	VAEGVVIRPERDADHSVIAEVVRAAFVGHPDEVAS
Ga0157378_116101592	3300013297	Miscanthus Rhizosphere	VAEGVVIRPEREADHPVIAEVVRAAFVGHPHEVASFVERIRESDQSIP
Ga0163162_123757461	3300013306	Switchgrass Rhizosphere	VAQSVVIRPERDSDHPVIAEVVRAAFVGHPDEVASFVERIRASEQF
Ga0157380_133209611	3300014326	Switchgrass Rhizosphere	VAEGVVIRPERDADHPVIAEVVSAAFVRQPDEVPAFVERIRASEQFVPELALVAED
Ga0173483_100099726	3300015077	Soil	VAEGVVIRPERDADHPVIAEVVRAAFVRHPDEVALFVERIRASD
Ga0132258_111738294	3300015371	Arabidopsis Rhizosphere	VAEGVIIRPERDEDHPVIAEVVRAAFVEHPDEVASFVERIRA
Ga0132258_126783144	3300015371	Arabidopsis Rhizosphere	VAEGVVIRPERHADHPGIAELVRAAFVGHPDEVASFVERIRA
Ga0132256_1001125171	3300015372	Arabidopsis Rhizosphere	VAEGVVIRPERDADHAVIAEGVRAAFVRHPDEVASFVERIRESEQFIP
Ga0132257_1009063751	3300015373	Arabidopsis Rhizosphere	VADGVVIRPERDADHPAIAEVVGAAFVGQPDAVVSFVERIRASEQFI
Ga0132257_1023371391	3300015373	Arabidopsis Rhizosphere	VAVGVVIRPERDADHPVIAEVVRAAFVGHPDRVASFV
Ga0132255_1002771811	3300015374	Arabidopsis Rhizosphere	VAVRVVVRPERDADYSAIAQVVRAAFVGHPDEVASFVERIRASEQFIPE
Ga0132255_1013271111	3300015374	Arabidopsis Rhizosphere	VAERVVIRPERDEDHPVIAEVIRAAFVGHPDEVASFVERIRA
Ga0132255_1059409961	3300015374	Arabidopsis Rhizosphere	VAEGVIIRPERDEDHPVIAEVVRAAFVEPPDEVASFVERI
Ga0163161_102240551	3300017792	Switchgrass Rhizosphere	VAEGVVIRPERHADHPRIAELVRAAFVGHPDEVASFVERIRASEQFI
Ga0184635_100483091	3300018072	Groundwater Sediment	VPQLPSPPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVAS
Ga0173482_102846082	3300019361	Soil	VKAVDRSVAEGVVIRRERDADHPVIAEVVRAAFVGHPDEVASFVER
Ga0193704_10398452	3300019867	Soil	VPQLPSPPVAEGVVIRPERDADHPLIAEVVRAAFVGHPDEVAS
Ga0206353_107743601	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VAEDVVIRPECEEDRLAVGEVVRAAFVRHPDQVASLVERIRASDGFIPELAL
Ga0247788_11252391	3300022901	Soil	VSQLPSPPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFVER
Ga0247789_10853951	3300023266	Soil	VAEGVVIRPEREADHPVIAEVVRAAFDGHPDEVASFVERIRASEQFVP
Ga0207643_100720124	3300025908	Miscanthus Rhizosphere	VVEGIVIRPERGADQSVIAEVVNAAFSGRPEVASFVER
Ga0207662_102001021	3300025918	Switchgrass Rhizosphere	VAEGVVIRPEREADHPVIAEVVRAAFVGHPHEVASFVERIRESDQSIPELAFVAEDSS
Ga0207652_109928322	3300025921	Corn Rhizosphere	VADGVVIRPERDADHPAIAEVVRAAFVGHPDEVAAFVE
Ga0207694_108430241	3300025924	Corn Rhizosphere	MSDVVIRLERDSDHSTIAEVVRAAFVRHPDEVATFVERIRASEEFIPELA
Ga0207706_111008932	3300025933	Corn Rhizosphere	MSDVVIRLERDSDHSTIAEVVRAAFVRHPDEVATFV
Ga0207686_117394601	3300025934	Miscanthus Rhizosphere	VADGIVIRPERDADQPVIAEVVRAAFVGHPDEVASFVERIRASEQFI
Ga0207661_118088141	3300025944	Corn Rhizosphere	MAERIVIRPERDEDHPAVADVVRAAFVGHPDEVASF
Ga0207702_113037032	3300026078	Corn Rhizosphere	VADGVVIRPERDADHPAIAEVVRAAFVGHPDEVAAFVERIRAS
Ga0208761_10347402	3300026995	Soil	VAEGVVIRPERDADHPLIAEVVRAAFVEHPDEVASFVERIRAS
Ga0207448_1015522	3300027478	Soil	VPQLPSPPVAEGVVIRPERDADRRVIGDVVRAAFVGHPDEVASFVERIRASEHFI
Ga0247820_114040482	3300028597	Soil	VAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFV
Ga0307295_100005719	3300028708	Soil	MPQLPSPPVAEGVVIRPERDADRPLIAEVVRATFVGHPDEVASFVERIRASEQFI
Ga0307309_102045501	3300028714	Soil	VAGGANGVPQLPSPPVAEGVVIRPERDADHPLIAEVVRAAFVGHPDEVA
Ga0307313_100196254	3300028715	Soil	MPQLPSPPVAEGVVIRPERDADRPVIAEVVRAAFVGHPDEVASFVERIRASEQFIPELAL
Ga0307318_100676483	3300028744	Soil	MPQLPSPPVAEGVVIRPERDADRPVIAEVVRAAFVGHPDDVASF
Ga0307320_100359851	3300028771	Soil	MPQLPSPPVAEGVVIRPERDAYRPVIAEVVRAAFVRHPDEVASFV
Ga0307282_100513261	3300028784	Soil	VPQLPSPPVAEGVVIRPERDADHPLIAEVVRAAFVGHPDEVASFVE
Ga0247825_110117632	3300028812	Soil	MAGGSNRLPQLPSPQVAEGVVIRPEREADYPVIAEVVRAAFVGHPDEVAS
Ga0307289_100008551	3300028875	Soil	MPQLPSPPVAEGVVIRPERDADRPVIAEVVRAAFVGHPDEVASFVERIRASEQ
Ga0307304_104036661	3300028885	Soil	MPQLPSPPVAEGVVIRPERDADRPVIAEVVRAAFVGHPDEVASFVERI
Ga0307497_100193711	3300031226	Soil	LPPITIATLAEGVVIRPERDADHPVIAEIVRAAFVGYPDEVAAFVERIRA
Ga0307497_101965941	3300031226	Soil	MSPEAGTACPNYHRPVAEGIVIRPERDADHPVIAEVVRAAFVGHPDEVASFVERIRAS
Ga0310915_111602271	3300031573	Soil	VAESVVIRPERSADHPVIAEVVRGAFGGHPDEVVAFVERIRASEQF
Ga0307372_104400501	3300031671	Soil	VAEGVVIRPEREADHSVIAEVVCAAFVGHADEVASFVERIRASEQFIPELALV
Ga0318496_105678962	3300031713	Soil	VADGVVIRPENDADHPVIAEVVRAAFVGHPDEVASFVERIRASKQF
Ga0307405_115542971	3300031731	Rhizosphere	VSQLPSPPVAEGVVIRPERDADHPVIAEVVRAAFIKHADEVASFVGRIR
Ga0318501_101233442	3300031736	Soil	VAESVVIRPERSADHPVIAEVVRGAFGGHPDEVVAFVERIRASEQFIPELALVAEDASG
Ga0310900_105084591	3300031908	Soil	VAEGVVIRPEREADYPVIAEVVRAAFVGHPDEVASFVERI
Ga0308176_106893601	3300031996	Soil	MTRSTGMPSPPVAEGVAIRPEREADHPVIAEVVRAAFVGHPDEVALFVERIRASEHFVPELAWVAE
Ga0310906_102360733	3300032013	Soil	MAEGVVIRPEREADHPVIAEVVRAAFVGHPDEVASFVERI
Ga0307415_1011839842	3300032126	Rhizosphere	MPQLRSSPVAEGVVIRPERDADHPVIAEVVRAAFVGHPDEVASFV

Hidden Markov Model


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