Metagenome / Metatranscriptome Family F049872

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049872
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	54 residues
Representative Sequence	MPASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR
Number of Associated Samples	106
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.70 %
% of genes near scaffold ends (potentially truncated)	32.19 %
% of genes from short scaffolds (< 2000 bps)	91.10 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.233 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.082 % of family members)
Environment Ontology (ENVO)	Unclassified (41.096 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.644 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF01546	Peptidase_M20	3.42
PF02397	Bac_transf	2.05
PF13467	RHH_4	1.37
PF00072	Response_reg	1.37
PF12142	PPO1_DWL	0.68
PF05532	CsbD	0.68
PF13565	HTH_32	0.68
PF04392	ABC_sub_bind	0.68
PF13416	SBP_bac_8	0.68
PF00657	Lipase_GDSL	0.68
PF06627	DUF1153	0.68
PF01740	STAS	0.68
PF00589	Phage_integrase	0.68
PF13683	rve_3	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	2.05
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.68
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
All Organisms	root	All Organisms	28.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
cellular organisms	root	All Organisms → cellular organisms	28.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	19.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.37 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.37 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.68 %
Alphaproteobacteria bacterium 13_1_20CM_4_65_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.37 %
Dokdonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella	0.68 %
Alphaproteobacteria bacterium 13_1_20CM_4_65_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.37 %
unclassified Dokdonella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → unclassified Dokdonella	0.68 %
Alphaproteobacteria bacterium 13_1_20CM_4_65_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	18.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.37 %
Dokdonella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → unclassified Dokdonella → Dokdonella sp.	0.68 %
Alphaproteobacteria bacterium 13_1_20CM_4_65_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459019\|G14TP7Y01AXC8Q	Not Available	529	Open in IMG/M
3300000955\|JGI1027J12803_105709200	Not Available	752	Open in IMG/M
3300002245\|JGIcombinedJ26739_101470056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300004114\|Ga0062593_101679627	Not Available	693	Open in IMG/M
3300004156\|Ga0062589_100825504	Not Available	843	Open in IMG/M
3300004479\|Ga0062595_100907616	Not Available	743	Open in IMG/M
3300004479\|Ga0062595_101192226	Not Available	675	Open in IMG/M
3300005166\|Ga0066674_10026852	Not Available	2525	Open in IMG/M
3300005167\|Ga0066672_10809548	Not Available	589	Open in IMG/M
3300005171\|Ga0066677_10847925	Not Available	504	Open in IMG/M
3300005174\|Ga0066680_10753108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300005175\|Ga0066673_10139020	Not Available	1342	Open in IMG/M
3300005175\|Ga0066673_10175981	Not Available	1207	Open in IMG/M
3300005175\|Ga0066673_10396236	Not Available	806	Open in IMG/M
3300005175\|Ga0066673_10617231	Not Available	630	Open in IMG/M
3300005176\|Ga0066679_10044780	Not Available	2518	Open in IMG/M
3300005178\|Ga0066688_10793920	Not Available	593	Open in IMG/M
3300005179\|Ga0066684_10253601	Not Available	1156	Open in IMG/M
3300005184\|Ga0066671_10530557	Not Available	757	Open in IMG/M
3300005184\|Ga0066671_10813579	Not Available	597	Open in IMG/M
3300005187\|Ga0066675_10117290	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300005434\|Ga0070709_10101325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1919	Open in IMG/M
3300005434\|Ga0070709_10505940	Not Available	918	Open in IMG/M
3300005434\|Ga0070709_10730945	Not Available	772	Open in IMG/M
3300005435\|Ga0070714_101053249	Not Available	792	Open in IMG/M
3300005435\|Ga0070714_101340737	Not Available	698	Open in IMG/M
3300005436\|Ga0070713_100126398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2249	Open in IMG/M
3300005436\|Ga0070713_102034615	Not Available	557	Open in IMG/M
3300005451\|Ga0066681_10029472	All Organisms → cellular organisms → Bacteria	2885	Open in IMG/M
3300005467\|Ga0070706_100074379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3145	Open in IMG/M
3300005518\|Ga0070699_100216671	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300005518\|Ga0070699_101361473	Not Available	651	Open in IMG/M
3300005553\|Ga0066695_10136406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1522	Open in IMG/M
3300005559\|Ga0066700_11104576	Not Available	518	Open in IMG/M
3300005560\|Ga0066670_10480636	Not Available	765	Open in IMG/M
3300005560\|Ga0066670_10765219	Not Available	585	Open in IMG/M
3300005560\|Ga0066670_10966475	Not Available	520	Open in IMG/M
3300005561\|Ga0066699_10734618	Not Available	701	Open in IMG/M
3300005564\|Ga0070664_102085786	Not Available	538	Open in IMG/M
3300005566\|Ga0066693_10299965	Not Available	642	Open in IMG/M
3300005568\|Ga0066703_10457960	Not Available	763	Open in IMG/M
3300005569\|Ga0066705_10707939	Not Available	607	Open in IMG/M
3300005569\|Ga0066705_10881196	Not Available	531	Open in IMG/M
3300005569\|Ga0066705_10931010	Not Available	515	Open in IMG/M
3300005576\|Ga0066708_10092940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1780	Open in IMG/M
3300005576\|Ga0066708_10318734	Not Available	996	Open in IMG/M
3300005576\|Ga0066708_10361301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300005576\|Ga0066708_10906928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300005614\|Ga0068856_101620180	Not Available	660	Open in IMG/M
3300006028\|Ga0070717_10772674	Not Available	873	Open in IMG/M
3300006032\|Ga0066696_10219930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → unclassified Dokdonella → Dokdonella sp.	1218	Open in IMG/M
3300006032\|Ga0066696_10565478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300006046\|Ga0066652_101000769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	793	Open in IMG/M
3300006173\|Ga0070716_100588152	Not Available	835	Open in IMG/M
3300006237\|Ga0097621_101428704	Not Available	655	Open in IMG/M
3300006755\|Ga0079222_11454893	Not Available	638	Open in IMG/M
3300006804\|Ga0079221_11100156	Not Available	608	Open in IMG/M
3300006804\|Ga0079221_11739500	Not Available	509	Open in IMG/M
3300006854\|Ga0075425_100409381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1562	Open in IMG/M
3300006903\|Ga0075426_11324513	Not Available	547	Open in IMG/M
3300006904\|Ga0075424_102434088	Not Available	549	Open in IMG/M
3300009137\|Ga0066709_103385821	Not Available	579	Open in IMG/M
3300009143\|Ga0099792_11171224	Not Available	520	Open in IMG/M
3300010159\|Ga0099796_10179458	Not Available	849	Open in IMG/M
3300010320\|Ga0134109_10094836	Not Available	1033	Open in IMG/M
3300010322\|Ga0134084_10404513	Not Available	533	Open in IMG/M
3300010326\|Ga0134065_10125185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300010326\|Ga0134065_10282733	Not Available	630	Open in IMG/M
3300010337\|Ga0134062_10007309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3996	Open in IMG/M
3300010364\|Ga0134066_10183819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300010366\|Ga0126379_11058042	Not Available	917	Open in IMG/M
3300010373\|Ga0134128_12361336	Not Available	586	Open in IMG/M
3300010398\|Ga0126383_13697046	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010401\|Ga0134121_12998270	Not Available	519	Open in IMG/M
3300011120\|Ga0150983_13617871	Not Available	709	Open in IMG/M
3300012198\|Ga0137364_10456748	Not Available	958	Open in IMG/M
3300012198\|Ga0137364_10552617	Not Available	867	Open in IMG/M
3300012198\|Ga0137364_10955676	Not Available	649	Open in IMG/M
3300012199\|Ga0137383_10153731	Not Available	1684	Open in IMG/M
3300012200\|Ga0137382_10129975	Not Available	1691	Open in IMG/M
3300012200\|Ga0137382_10291893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1136	Open in IMG/M
3300012200\|Ga0137382_10513413	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300012203\|Ga0137399_10565718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	955	Open in IMG/M
3300012208\|Ga0137376_10024252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4712	Open in IMG/M
3300012208\|Ga0137376_10210430	Not Available	1683	Open in IMG/M
3300012208\|Ga0137376_10536807	Not Available	1014	Open in IMG/M
3300012285\|Ga0137370_10722358	Not Available	619	Open in IMG/M
3300012469\|Ga0150984_105093552	Not Available	535	Open in IMG/M
3300012683\|Ga0137398_10386247	Not Available	952	Open in IMG/M
3300012683\|Ga0137398_10421622	Not Available	910	Open in IMG/M
3300012683\|Ga0137398_10428222	Not Available	903	Open in IMG/M
3300012917\|Ga0137395_10547711	Not Available	835	Open in IMG/M
3300012924\|Ga0137413_10466395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	922	Open in IMG/M
3300012925\|Ga0137419_10914715	Not Available	723	Open in IMG/M
3300012925\|Ga0137419_11042823	Not Available	679	Open in IMG/M
3300012957\|Ga0164303_10487599	Not Available	786	Open in IMG/M
3300012971\|Ga0126369_11336718	Not Available	807	Open in IMG/M
3300012984\|Ga0164309_10803189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300012986\|Ga0164304_10690028	Not Available	774	Open in IMG/M
3300013100\|Ga0157373_11137074	Not Available	587	Open in IMG/M
3300014497\|Ga0182008_10838369	Not Available	536	Open in IMG/M
3300014497\|Ga0182008_10963535	Not Available	506	Open in IMG/M
3300015356\|Ga0134073_10007984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2298	Open in IMG/M
3300015357\|Ga0134072_10311455	Not Available	591	Open in IMG/M
3300018433\|Ga0066667_10177183	Not Available	1539	Open in IMG/M
3300018433\|Ga0066667_11122315	Not Available	681	Open in IMG/M
3300018433\|Ga0066667_11561300	Not Available	586	Open in IMG/M
3300018433\|Ga0066667_12145694	Not Available	518	Open in IMG/M
3300018468\|Ga0066662_10833822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300018482\|Ga0066669_10287416	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300018482\|Ga0066669_10476456	Not Available	1077	Open in IMG/M
3300018482\|Ga0066669_10841208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300018482\|Ga0066669_11641111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300018482\|Ga0066669_11740022	Not Available	574	Open in IMG/M
3300021178\|Ga0210408_10309546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1260	Open in IMG/M
3300021560\|Ga0126371_10320348	Not Available	1681	Open in IMG/M
3300022756\|Ga0222622_10744388	Not Available	714	Open in IMG/M
3300025906\|Ga0207699_10768598	Not Available	707	Open in IMG/M
3300025910\|Ga0207684_10012750	Not Available	7290	Open in IMG/M
3300025915\|Ga0207693_10447460	Not Available	1009	Open in IMG/M
3300025916\|Ga0207663_10059848	Not Available	2412	Open in IMG/M
3300025929\|Ga0207664_10424334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1185	Open in IMG/M
3300025929\|Ga0207664_11002376	Not Available	748	Open in IMG/M
3300026078\|Ga0207702_10446119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1255	Open in IMG/M
3300026305\|Ga0209688_1109975	Not Available	518	Open in IMG/M
3300026305\|Ga0209688_1117758	Not Available	505	Open in IMG/M
3300026314\|Ga0209268_1087423	Not Available	892	Open in IMG/M
3300026314\|Ga0209268_1095440	Not Available	828	Open in IMG/M
3300026322\|Ga0209687_1023132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2033	Open in IMG/M
3300026323\|Ga0209472_1092003	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300026325\|Ga0209152_10364549	Not Available	556	Open in IMG/M
3300026331\|Ga0209267_1138991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1011	Open in IMG/M
3300026527\|Ga0209059_1025239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2697	Open in IMG/M
3300026547\|Ga0209156_10278595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300026550\|Ga0209474_10074939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2340	Open in IMG/M
3300026552\|Ga0209577_10463567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	872	Open in IMG/M
3300026723\|Ga0208342_101108	Not Available	736	Open in IMG/M
3300027616\|Ga0209106_1111938	Not Available	612	Open in IMG/M
3300027669\|Ga0208981_1131999	Not Available	637	Open in IMG/M
3300027765\|Ga0209073_10407465	Not Available	559	Open in IMG/M
3300027775\|Ga0209177_10380231	Not Available	561	Open in IMG/M
3300027903\|Ga0209488_10216451	Not Available	1442	Open in IMG/M
3300031058\|Ga0308189_10487274	Not Available	529	Open in IMG/M
3300031152\|Ga0307501_10275180	Not Available	510	Open in IMG/M
3300031754\|Ga0307475_11538456	Not Available	510	Open in IMG/M
3300031962\|Ga0307479_10424071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1315	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.78%
Host-Associated	Host-Associated	7.53%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.10%
Plants	Host-Associated → Plants	7.53%
Aquatic	Environmental → Aquatic	0.68%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.37%
Sediment	Environmental → Aquatic → Sediment	0.68%
Roots	Host-Associated → Plants → Roots	0.68%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.92%
Loam	Environmental → Terrestrial → Soil → Loam	19.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.37%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.16%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026723	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized - NN357 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_03136810	2170459019	Switchgrass, Maize And Mischanthus Litter	MGASNDTMREIAKALRRHVDTATLEKVVNELLDVPGNRDFREAIEELARELLRR
JGI1027J12803_1057092002	3300000955	Soil	MPPSDDAIREIAKAFRRHVDAPTLEKVVNELLDVRGNKDFREVIQHLARELMQR*
JGIcombinedJ26739_1014700562	3300002245	Forest Soil	MAAVSNDAIREIAKALRRNINAKTLEKVVNELFEVPGNRDFRETIETLARELVER*
Ga0062593_1016796272	3300004114	Soil	VTASNDTMREIAKALRHHVDTATLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0062589_1008255041	3300004156	Soil	ERIPNMTASNDTTREIAKALRHHVDAATLEKIVNELLDVPGNRSFREAIALARELMRR*
Ga0062595_1009076162	3300004479	Soil	NDAIREIGKALRRHVDAATLETIVNELLDVRGNKEFRELIGRLADELARK*
Ga0062595_1011922261	3300004479	Soil	HFLNERIPNMTASNDTTREIAKALRHHVDAATLEKIVNELLDVPGNRSFREAIALARELMRR*
Ga0066674_100268522	3300005166	Soil	MPASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR*
Ga0066672_108095482	3300005167	Soil	MRPSNDAIPEIAKALRRHVDAATLEKIVNELLDVRGNRDFREAIEELPRELIRR*
Ga0066677_108479251	3300005171	Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEKLARELMQRSD*
Ga0066680_107531082	3300005174	Soil	REIAKALRHHVEAATLEKIVNELLEVPGNKSFRDAIEALARKLMRR*
Ga0066673_101390202	3300005175	Soil	MTASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRDFRSAIEELARELVRR*
Ga0066673_101759812	3300005175	Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD*
Ga0066673_103962361	3300005175	Soil	MTTSNDTIREIAKALRHHVDAATLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0066673_106172312	3300005175	Soil	MPPSNDTIREIAKALQRHVDAATLEKIVNELLDVPGNKSFRDAIEAL
Ga0066679_100447803	3300005176	Soil	MPASNDTIRKIAKAVRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR*
Ga0066688_107939201	3300005178	Soil	MPPSDDSIREIAKAFRRHVDAATLEKIINELLDVPGNKSFRDAIETLARELMQRSD*
Ga0066684_102536014	3300005179	Soil	MTVSNDIREIAKALGHHVDAATLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0066671_105305571	3300005184	Soil	MPPSNDAIPEIAKALRRHVEAATLEKIVNELLDVPGNKSFRDAIEALARELMRRLD*
Ga0066671_108135792	3300005184	Soil	MTASNDTIREIAKGLRRHVDAATLQKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0066675_101172902	3300005187	Soil	MPPPSNDTIREIVKILRRHVDAATLEKVVNELLDIPGNRDFRSAIEELARELMRR*
Ga0070709_101013254	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSNDAIREIGKALRRHVDAATLETIVNELLDVRGNKEFRELIGRLADELARK*
Ga0070709_105059403	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTASNDTIREIAKALRRHVDAAMLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0070709_107309451	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	IAKALRRDVDAATLENVVNELLDVRGNRDFREAIEELARELMRR*
Ga0070714_1010532492	3300005435	Agricultural Soil	MPTSNDAMREIAKALRRDVDAATLENVVNELLDVRGNRDFREAIEELARELMRR*
Ga0070714_1013407371	3300005435	Agricultural Soil	MTVSNDAIREIGKALRRHVDAATLEMIVNELLDVPGNRSFRDVIEALARELMRS*
Ga0070713_1001263982	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTASNDAIREIVKALRRHIDAATLEKIVNELLDVPGNRSFRDAIEELARELMRR*
Ga0070713_1020346151	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPTSNDAMREIAKALRRDVDAATLENVVNELLDVRGNRDFREAIEELARELMR
Ga0066681_100294726	3300005451	Soil	MPPSNDTIREIAKALRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD*
Ga0070706_1000743793	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAVSNDAFREIAKALRRHVDAATLERVVNQLLDIPGNRDFRATIEALVRELM*
Ga0070699_1002166712	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPAYNDTIREIAKALRRHVDAAILEKVVNEILDVPSNRSFREASEALARKLMRR*
Ga0070699_1013614732	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAVSNDAIREIAKALRRHVDAATLERVVNQLLDIPGNRDFRATIEALTRELM*
Ga0066695_101364061	3300005553	Soil	MSASNDTMREIAKALRRHVDTATLEKVVNELLDVPGNRDFRNDIEELARELMRR*
Ga0066700_111045761	3300005559	Soil	MREIAKALRRHVDTATLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0066670_104806362	3300005560	Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIETLARELMQRSD*
Ga0066670_107652193	3300005560	Soil	REIAKALRRHVDAATLEKVVNELLEVPGNRDFRNAIEELARELMRR*
Ga0066670_109664751	3300005560	Soil	SDMTTSNDTIREIAKALRHHVDAATLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0066699_107346183	3300005561	Soil	MPASNDAIREIAKALKSHVDAETLEKVVNELLDVRGNRDFREAIEELARELMR
Ga0070664_1020857862	3300005564	Corn Rhizosphere	MTASNDAIREIVKALRRHIDAATLEKIVNELLDVPGNRSFRDAIEELARELMQR*
Ga0066693_102999652	3300005566	Soil	MPPSNDTIREIAKALQRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMRR
Ga0066703_104579603	3300005568	Soil	MTTSNDTIREIAKALRHHVDAATLEKVVNELLDVPGNRDFRSAIEELARELVRR*
Ga0066705_107079391	3300005569	Soil	IREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEKLARELMQRSD*
Ga0066705_108811961	3300005569	Soil	MPPSDDTIREIAKGFRRHVDAATLEKIVNELLDVPGNKSFRDAIE
Ga0066705_109310102	3300005569	Soil	MTVSNDIREIAEALRHQLMRRRWKVVNELLDVPGNRDFRNAIEELAREDAAVTREQSRLNRA
Ga0066708_100929403	3300005576	Soil	MPPSDDTIREIAKGFRRHVDAATLEKIVNELLDVPGNKSFRDAIETLARELMQRSD*
Ga0066708_103187341	3300005576	Soil	MPPSNDTIREIAKALRLHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD*
Ga0066708_103613012	3300005576	Soil	MSASNDTTREIAKALRRHVDAATLEKVVNELLEVPGNRDFRNAIEELARELMRR*
Ga0066708_109069281	3300005576	Soil	MTVSNDIREIAKALRHHVDAATLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0068856_1016201801	3300005614	Corn Rhizosphere	MPASNDTIREIAKALRRHVDAATLEKIVNELLDVPGNRSFREAIEALARELMR
Ga0070717_107726741	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPTSNDAMREIAKALRRDVDAATLENVVNELLDVRGNRDFREAIEELAREL
Ga0066696_102199303	3300006032	Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRGAIETLARELMQRSD*
Ga0066696_105654781	3300006032	Soil	IAKALRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD*
Ga0066652_1010007692	3300006046	Soil	MTVSNDTIREMAKALRHHVDAAMLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0070716_1005881522	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AKALRRDVDAATLENVVNELLDVRGNRDFREAIEELARELMRR*
Ga0097621_1014287041	3300006237	Miscanthus Rhizosphere	PSHFLNERIPNMTASNDTTREIAKALRHHVDAATLEKIVNELLDVPGNRSFREAIALARELMRR*
Ga0079222_114548933	3300006755	Agricultural Soil	SNDAIREIGKALRRHVDAATLETIVNELLDVPGNRSFREAIEALARELIRP*
Ga0079221_111001561	3300006804	Agricultural Soil	SNDAIREIGKALRRHVDAATLETIVNELLDVRGNKEFRELIGRLADELARK*
Ga0079221_117395001	3300006804	Agricultural Soil	MPPSDETIREIAKALRHHVEPATLEKIVNELLDVPGNRSFREAIEALARELMRR*
Ga0075425_1004093812	3300006854	Populus Rhizosphere	MREIAKALRHHVDTATLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0075426_113245131	3300006903	Populus Rhizosphere	MTVSNDAIREIGKALRRHVDAATLEMIVNELLDVPGNRSFRDVIDALARELMRS*
Ga0075424_1024340881	3300006904	Populus Rhizosphere	EIGKALRRHVDAATLETIVNELLDVRGNKEFRELIGRLADELARK*
Ga0066709_1033858211	3300009137	Grasslands Soil	MPPSNDTIREIAKALRRHVDAATLEKIVNELLDVRGNRDFREAIEELPRELIRR*
Ga0099792_111712241	3300009143	Vadose Zone Soil	MPAFNDTTRQIAKALRRHVDAATLEKIVNELLGRARQQESFRDAIEALARELMQR*
Ga0099796_101794582	3300010159	Vadose Zone Soil	REIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD*
Ga0134109_100948362	3300010320	Grasslands Soil	MPASNDTIREMAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR*
Ga0134084_104045131	3300010322	Grasslands Soil	MSMPPSNDAIPEIAKALRHHVDAATLEKVVNELLDIPGNRDFRSAIEELARELMRR*
Ga0134065_101251851	3300010326	Grasslands Soil	IREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDMIEALARELMRR*
Ga0134065_102827331	3300010326	Grasslands Soil	MPPSNDTIREIAKALRLHVDAATLEKIVNELLDVPGNKSFRDTIEALARELMQRSD*
Ga0134062_100073095	3300010337	Grasslands Soil	MPPSNDTIWEIAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR*
Ga0134066_101838191	3300010364	Grasslands Soil	MRPSNDAIPEIAKALRRHVDAATLEKIVNELLEVPGNKSFRDAIEALARKLMRR*
Ga0126379_110580421	3300010366	Tropical Forest Soil	MPASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRSFRDEIEALARELMRR*
Ga0134128_123613361	3300010373	Terrestrial Soil	MTVSNDAIREIGKALRRHVDAATLETIVNELLDVRGNKEFRELIGRLADELARK*
Ga0126383_136970461	3300010398	Tropical Forest Soil	TASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRDFRDAIEALARELMRR*
Ga0134121_129982701	3300010401	Terrestrial Soil	MTASNDTTREIAKALRHHVDAATLEKIVNELLDVPGNRSFREAIALARELMRR*
Ga0150983_136178711	3300011120	Forest Soil	MTASSDTLREIAKALRRHVDAATLENIVNELLDVPGNRNFRDEINALARELMRR*
Ga0137364_104567481	3300012198	Vadose Zone Soil	NDTTREIAKALRRHVDAATLEKVVNELLEVPGNRDFRNAIEELARELMRR*
Ga0137364_105526173	3300012198	Vadose Zone Soil	MTVSNDTIREIAKALRHHVDAATLEKVVNELLDVPGNRDFRNAIEELARELMRR*
Ga0137364_109556761	3300012198	Vadose Zone Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSDCLPTRATLARRG
Ga0137383_101537312	3300012199	Vadose Zone Soil	MPPSDDSIREIAKALGHHVDAATLEKIVDDLLDVPGNRDFRNAI
Ga0137382_101299752	3300012200	Vadose Zone Soil	MPAFNDTTREIAKALRRPVDAPTLEKIVNELLDVPGNKSFRDAIEALAREWMRR*
Ga0137382_102918933	3300012200	Vadose Zone Soil	NDAIPEIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD*
Ga0137382_105134131	3300012200	Vadose Zone Soil	MPPPSNDTIREIAKAFRRHVDAATLEKIVNALLDVPGSKIFRDAIEALARELMRR
Ga0137399_105657182	3300012203	Vadose Zone Soil	AGQRCVSPDMPAFNDTTREIAKALRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMRR*
Ga0137376_100242525	3300012208	Vadose Zone Soil	MPPPSNDTIREIVKILRRHVDAATLEKVVNELLDIPGNRDFRSAIEGLARELMRR*
Ga0137376_102104304	3300012208	Vadose Zone Soil	MPPSDDTIREIAKAFRRHVHAATREKIVNELLDVPGNKSFRDAIETLARELMQRSD*
Ga0137376_105368071	3300012208	Vadose Zone Soil	MPASNNTIREIAKALRHHVDAATLEKVVNELLDVPGNRSFRDEIEILARELMRR*
Ga0137370_107223582	3300012285	Vadose Zone Soil	MPPSNDTIREIAKALQRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMRR*
Ga0150984_1050935521	3300012469	Avena Fatua Rhizosphere	MPPSNDTIREIAKALRRHVDAPTLEKIVNELLDVPGNKSFRDAIEALARELIR
Ga0137398_103862471	3300012683	Vadose Zone Soil	IAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR*
Ga0137398_104216222	3300012683	Vadose Zone Soil	MPPSDDSIRELAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD*
Ga0137398_104282224	3300012683	Vadose Zone Soil	PNMSASNDTMREIAKALRRHVDAATLEKVVNELLEVPGNRDFRNAIEELARELMRR*
Ga0137395_105477112	3300012917	Vadose Zone Soil	MRPSNDAIPEIAKALRRHVDAATLEKIVNELLDVPGNKSFRDAIETLARELMQRSD*
Ga0137413_104663951	3300012924	Vadose Zone Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEKLA
Ga0137419_109147151	3300012925	Vadose Zone Soil	MPPSNDTIREIAKALRRHVDVATLEKLVNELLDVPGNKSFRDAIEALARELVQH
Ga0137419_110428233	3300012925	Vadose Zone Soil	MPPSDDSIREIAKAFRRHVDAATPEKIVNELLDLPGNKSFRDAIEALARELMRHSD*
Ga0164303_104875991	3300012957	Soil	MPPSDDTIREIAKALRHHVDAATLEKIVNELLDVPGNRSFREAIEALARELMRR*
Ga0126369_113367181	3300012971	Tropical Forest Soil	MPASNDTIREIANARRRHVDAATLEKIVNELLAVPGNRNFREAIEALARELMRR*
Ga0164309_108031892	3300012984	Soil	MPPSDDTIREIAKALRHHVEPATLEKIINELLDVPGNKGFRDAIEALARELMRR*
Ga0164304_106900281	3300012986	Soil	SNDAIREIGKALRRHVDAATLEMIVNELLDVPGNRSFRDVIEALARELMRS*
Ga0157373_111370741	3300013100	Corn Rhizosphere	MTTSNDAIREIGKALRRHVDAATLETIVNELLDVQGNKEFRELIGRLADELARK*
Ga0182008_108383691	3300014497	Rhizosphere	MQASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR*
Ga0182008_109635352	3300014497	Rhizosphere	MTASNDTIREIAKALRRHVDAATLEKVVNELLDFPGNRDFRNAIEELARELMRR*
Ga0134073_100079841	3300015356	Grasslands Soil	MPPSNDTIREIAKALRRHVDAATLEKIVNELLDIPGNRDFRSAIEELARELMRR*
Ga0134072_103114552	3300015357	Grasslands Soil	MPPSNDTIREIAKALRLHVDAATLEKIVNELLEVPGNKSFRDAIEALARKLMRR*
Ga0066667_101771831	3300018433	Grasslands Soil	MPASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR
Ga0066667_111223151	3300018433	Grasslands Soil	MPPSNDTIREIAKALRLHVDAATLEKIVNELLDVPGRDAIEALARELMQRSD
Ga0066667_115613001	3300018433	Grasslands Soil	MPPSNDTIREIAKALQRHVDAATLEKIVNELLDVPGNKSFRDAIE
Ga0066667_121456942	3300018433	Grasslands Soil	MPPSTIREIAKAFRRHVDAATLEKIVNELLDLPGNKSFRDTIEALARELMRR
Ga0066662_108338222	3300018468	Grasslands Soil	MPASDDTIREIAKALRRHVDAATLEKIVNELLDVRGNRDFREAIEELPRELIRR
Ga0066669_102874162	3300018482	Grasslands Soil	MPPSNDTIREIAKALRLHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD
Ga0066669_104764562	3300018482	Grasslands Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEKLARELMQRSD
Ga0066669_108412083	3300018482	Grasslands Soil	SASNDTMREIAKALRRHVDTATLEKVVNELLDVPGNRDFRNDIEELARELMRR
Ga0066669_116411111	3300018482	Grasslands Soil	IREIAKALRHHVDAATLEKVVNELLDVLGNRDFRNAIEELARELMRR
Ga0066669_117400222	3300018482	Grasslands Soil	MTASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRDFRSAIEELARELVRR
Ga0210408_103095463	3300021178	Soil	MAAASNDAIREIAKALRRHVDAKTLEQVVNELLEVPGNRDFRETIETLARELVER
Ga0126371_103203483	3300021560	Tropical Forest Soil	MPASNDTIREIANARRRHVDAATLEKIVNELLAVPGNRNFREAIEALARELMRR
Ga0222622_107443881	3300022756	Groundwater Sediment	MPPSDDSIREIAKAFRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR
Ga0207699_107685981	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DGGPIGRERSPMTASNDAIREIVKALRRHIDAATLEKIVNELLDVPGNRSFRDAIEELARELMRR
Ga0207684_100127504	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAVSNDAFREIAKALRRHVDAATLERVVNQLLDIPGNRDFRATIEALVRELM
Ga0207693_104474601	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSNDAIREIGKALRRHVDAATLETIVYELLDVRGNKEFRELIGRLADELARK
Ga0207663_100598481	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSNDAIREIGKALRRHVDAATLEMIVNELLDVPGNRSFRDVIEALARELMRS
Ga0207664_104243342	3300025929	Agricultural Soil	MDASNDAIPEIGKALRRHIDAATEEKIVNELLRGAGNKDFRELIARLADELK
Ga0207664_110023762	3300025929	Agricultural Soil	MTAFNDAIREIAKALRRHIDAATLEKIVNELLDVPGNRSFRDAIEELARELMQR
Ga0207702_104461192	3300026078	Corn Rhizosphere	VTASNDTMREIAKALRHHVDTATLEKVVNELLDVPGNRDFRNAIEELARELMRR
Ga0209688_11099752	3300026305	Soil	MTTSNDTIREIAKALRHHVDAATLEKVVNELLDVPGNRDFRNAIEELARELMRR
Ga0209688_11177581	3300026305	Soil	MPASNDTIREMAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEAL
Ga0209268_10874231	3300026314	Soil	MSASNDTTREIAKALRRHVDAATLEKVVNELLEVPGNRDFRNAIEELARELMRR
Ga0209268_10954401	3300026314	Soil	MPASNDTIREIAKALRRHVDAATLEKVVNELLDVPGNRSFREEIEALA
Ga0209687_10231324	3300026322	Soil	MRPSNDAIPEIAKALRRHVDAATLEKIVNELLDVPDNRDFRNAIEELARELMRR
Ga0209472_10920032	3300026323	Soil	MPPSNDTIREIAKALRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRSD
Ga0209152_103645492	3300026325	Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRGAIETLARELMQRSD
Ga0209267_11389913	3300026331	Soil	MPPSNDTIREIAKALRLHVDAATLEKIVNELLEVPGNKSFRDAIEALARELMQRSD
Ga0209059_10252395	3300026527	Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARKLMRR
Ga0209156_102785951	3300026547	Soil	MPPPSNDTIREIVKILRRHVDAATLEKVVNELLDIPGNRDFRSAIEELARELMRR
Ga0209474_100749392	3300026550	Soil	MPPSDDTIREIAKGFRRHVDAATLEKIVNELLDVPGNKSFRDAIETLARELMQRSD
Ga0209577_104635671	3300026552	Soil	MPPSNDAIPEIAKALRRHVEAATLEKIVNELLDVPGNKSFRDAIEALARELMRR
Ga0208342_1011082	3300026723	Soil	MTVSNDAIREIAKALRHHVDAATLEKIVNELLDVPGNRSFRDVIEALARELMRS
Ga0209106_11119381	3300027616	Forest Soil	MPPSNDTIREIAKAFRRHVDAATPEKIVNELLDLPGNKSFRDAIEALARELMRHSD
Ga0208981_11319991	3300027669	Forest Soil	MPPSDDTIRKIAEAFRRHVDAATLEKIVNELLEVPGNKSFRDAIETLARELMQRSD
Ga0209073_104074651	3300027765	Agricultural Soil	MTVSNDAIREIGKALRRHVDAATLEMIVNELLDVPGNRSFRDVIDALARELMRS
Ga0209177_103802312	3300027775	Agricultural Soil	NMTASNDTTREIAKALRHHVDAATLEKIVNELLDVPGNRSFREAIALARELMRR
Ga0209488_102164512	3300027903	Vadose Zone Soil	MPASNDTIGEIAKALRRHVDAATLEKVVNELLDVPGNRSFREAIEALARELMRR
Ga0308189_104872741	3300031058	Soil	MPPSNDTIREIAKALRRHVDAATLEKIVNELLDVPGNKSFRDAIEALARELMQRS
Ga0307501_102751801	3300031152	Soil	MPPSDDSIREIAKAFRRHVDAATLEKIVNELLDVPGNKSFREAIEALARELMRRSD
Ga0307475_115384562	3300031754	Hardwood Forest Soil	MTASNDTLREIAKALRRHVDAATLENIVNELLDVPGNRNFRDQINALARELMRR
Ga0307479_104240711	3300031962	Hardwood Forest Soil	MPASNDTIREIAKALRHHVDAATLEKVVNELLDVPGDRSFREQMQTLARELMRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049872

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences