Metagenome / Metatranscriptome Family F049584

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049584
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	43 residues
Representative Sequence	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLK
Number of Associated Samples	130
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.86 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	86.30 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.671 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.918 % of family members)
Environment Ontology (ENVO)	Unclassified (21.233 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.945 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.99% β-sheet: 0.00% Coil/Unstructured: 71.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF11695	DUF3291	6.85
PF00326	Peptidase_S9	5.48
PF07687	M20_dimer	4.79
PF03576	Peptidase_S58	4.11
PF00593	TonB_dep_Rec	4.11
PF05957	DUF883	4.11
PF02781	G6PD_C	2.74
PF13676	TIR_2	2.74
PF14329	DUF4386	2.74
PF01075	Glyco_transf_9	2.74
PF07715	Plug	2.05
PF08240	ADH_N	2.05
PF12697	Abhydrolase_6	0.68
PF00999	Na_H_Exchanger	0.68
PF08352	oligo_HPY	0.68
PF04828	GFA	0.68
PF07589	PEP-CTERM	0.68
PF00144	Beta-lactamase	0.68
PF01883	FeS_assembly_P	0.68
PF12706	Lactamase_B_2	0.68
PF04168	Alpha-E	0.68
PF01546	Peptidase_M20	0.68
PF00107	ADH_zinc_N	0.68
PF02423	OCD_Mu_crystall	0.68
PF01569	PAP2	0.68
PF14403	CP_ATPgrasp_2	0.68
PF00196	GerE	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	8.22
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	4.11
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	2.74
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	2.74
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.68
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.68
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.68
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	0.68
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.68
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.68
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.68
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.68
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.68
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.41 %
Unclassified	root	N/A	9.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.41 %
Unclassified	root	N/A	9.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.67 %
Unclassified	root	N/A	9.59 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.27 %
Unclassified	root	N/A	9.59 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	2.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.37 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.59 %
Unclassified	root	N/A	9.59 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	2.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.37 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.37 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.59 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	6.85 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	2.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.37 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.37 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.37 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.59 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.85 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	2.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.37 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.37 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.68 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.68 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.59 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.85 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	2.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.37 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.37 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.68 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.68 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.59 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.85 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.37 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.37 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.68 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.68 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.59 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6.85 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.37 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.37 %
Amycolatopsis taiwanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis taiwanensis	0.68 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.68 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig93468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	665	Open in IMG/M
3300001084\|JGI12648J13191_1007393	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300001593\|JGI12635J15846_10190687	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300004091\|Ga0062387_101747991	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300005178\|Ga0066688_10881374	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005437\|Ga0070710_11383578	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005455\|Ga0070663_101999803	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300005531\|Ga0070738_10144605	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300005533\|Ga0070734_10766457	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300005541\|Ga0070733_10498822	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005542\|Ga0070732_10370005	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005559\|Ga0066700_10419480	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005576\|Ga0066708_10050823	All Organisms → cellular organisms → Bacteria	2319	Open in IMG/M
3300005610\|Ga0070763_10567482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	655	Open in IMG/M
3300005614\|Ga0068856_101060375	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005614\|Ga0068856_101333790	Not Available	732	Open in IMG/M
3300005618\|Ga0068864_101073753	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300006638\|Ga0075522_10587856	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300007788\|Ga0099795_10074609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1286	Open in IMG/M
3300009012\|Ga0066710_100395148	All Organisms → cellular organisms → Bacteria → Proteobacteria	2059	Open in IMG/M
3300009545\|Ga0105237_11012421	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300009551\|Ga0105238_11345234	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300010043\|Ga0126380_11098782	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	678	Open in IMG/M
3300010046\|Ga0126384_10879347	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300010152\|Ga0126318_10735179	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300010303\|Ga0134082_10061932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1447	Open in IMG/M
3300010337\|Ga0134062_10067636	All Organisms → cellular organisms → Bacteria → Proteobacteria	1486	Open in IMG/M
3300010359\|Ga0126376_13078960	Not Available	516	Open in IMG/M
3300010373\|Ga0134128_12154269	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300010376\|Ga0126381_100102554	All Organisms → cellular organisms → Bacteria	3656	Open in IMG/M
3300010396\|Ga0134126_12028839	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300010396\|Ga0134126_12173909	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300011119\|Ga0105246_10260865	Not Available	1380	Open in IMG/M
3300012212\|Ga0150985_106952428	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300012285\|Ga0137370_10441105	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	792	Open in IMG/M
3300012351\|Ga0137386_10276449	Not Available	1208	Open in IMG/M
3300012582\|Ga0137358_10025774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3823	Open in IMG/M
3300012917\|Ga0137395_10188506	All Organisms → cellular organisms → Bacteria → Proteobacteria	1431	Open in IMG/M
3300012960\|Ga0164301_10868536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis taiwanensis	697	Open in IMG/M
3300012960\|Ga0164301_11613051	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300012977\|Ga0134087_10063213	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300013059\|Ga0154012_147600	Not Available	542	Open in IMG/M
3300013100\|Ga0157373_10986762	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300013307\|Ga0157372_10139792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2789	Open in IMG/M
3300015374\|Ga0132255_102261538	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300016270\|Ga0182036_10519015	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300016294\|Ga0182041_10426068	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300016319\|Ga0182033_11360325	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300016341\|Ga0182035_10057367	All Organisms → cellular organisms → Bacteria	2676	Open in IMG/M
3300016341\|Ga0182035_10176180	All Organisms → cellular organisms → Bacteria → Proteobacteria	1669	Open in IMG/M
3300016341\|Ga0182035_10254399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	1419	Open in IMG/M
3300017822\|Ga0187802_10180942	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300017959\|Ga0187779_11152038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	544	Open in IMG/M
3300017961\|Ga0187778_10019289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	4184	Open in IMG/M
3300017961\|Ga0187778_10724977	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300017972\|Ga0187781_10594438	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300017974\|Ga0187777_11337489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	527	Open in IMG/M
3300017975\|Ga0187782_11579526	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300017999\|Ga0187767_10374033	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300018058\|Ga0187766_11262996	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300018482\|Ga0066669_10069135	All Organisms → cellular organisms → Bacteria	2325	Open in IMG/M
3300020069\|Ga0197907_10412217	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300020069\|Ga0197907_11059987	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300020069\|Ga0197907_11271027	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300020077\|Ga0206351_10101256	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300020077\|Ga0206351_10593389	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300020080\|Ga0206350_10024977	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300020082\|Ga0206353_10091201	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300020082\|Ga0206353_11077589	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300020579\|Ga0210407_11076858	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300020579\|Ga0210407_11387124	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300020581\|Ga0210399_10887744	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	724	Open in IMG/M
3300020582\|Ga0210395_10906127	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300021178\|Ga0210408_11131042	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300021181\|Ga0210388_11209272	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300021374\|Ga0213881_10472872	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300021401\|Ga0210393_10980669	Not Available	684	Open in IMG/M
3300021406\|Ga0210386_10930779	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300021560\|Ga0126371_10069714	All Organisms → cellular organisms → Bacteria	3417	Open in IMG/M
3300022506\|Ga0242648_1000210	All Organisms → cellular organisms → Bacteria → Proteobacteria	3268	Open in IMG/M
3300022722\|Ga0242657_1242086	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300025505\|Ga0207929_1110427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	512	Open in IMG/M
3300025544\|Ga0208078_1006757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2823	Open in IMG/M
3300025906\|Ga0207699_10332035	Not Available	1069	Open in IMG/M
3300025909\|Ga0207705_10726119	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300025917\|Ga0207660_10034753	All Organisms → cellular organisms → Bacteria	3495	Open in IMG/M
3300025921\|Ga0207652_11426393	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300025924\|Ga0207694_11784610	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300025928\|Ga0207700_11685006	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300025986\|Ga0207658_11965866	Not Available	532	Open in IMG/M
3300026078\|Ga0207702_11396255	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300026342\|Ga0209057_1217772	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300027158\|Ga0208725_1067409	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300027633\|Ga0208988_1027235	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300027664\|Ga0207873_1106596	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	886	Open in IMG/M
3300027867\|Ga0209167_10141961	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300027894\|Ga0209068_10235529	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300027908\|Ga0209006_11354690	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300028380\|Ga0268265_12532128	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	519	Open in IMG/M
3300028795\|Ga0302227_10252014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	675	Open in IMG/M
3300028906\|Ga0308309_11083118	Not Available	693	Open in IMG/M
3300029910\|Ga0311369_10225306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1725	Open in IMG/M
3300029999\|Ga0311339_11665217	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300030007\|Ga0311338_10017899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10343	Open in IMG/M
3300030056\|Ga0302181_10446376	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300030503\|Ga0311370_10055519	All Organisms → cellular organisms → Bacteria → Proteobacteria	5800	Open in IMG/M
3300030520\|Ga0311372_11013188	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300030524\|Ga0311357_11441039	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300030618\|Ga0311354_10318511	All Organisms → cellular organisms → Bacteria → Proteobacteria	1600	Open in IMG/M
3300030737\|Ga0302310_10231184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1066	Open in IMG/M
3300031231\|Ga0170824_127022728	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300031469\|Ga0170819_10327211	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300031543\|Ga0318516_10400115	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031545\|Ga0318541_10205216	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300031680\|Ga0318574_10827444	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031708\|Ga0310686_109815480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	744	Open in IMG/M
3300031713\|Ga0318496_10496223	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031715\|Ga0307476_11211329	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300031736\|Ga0318501_10114077	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300031753\|Ga0307477_10032616	All Organisms → cellular organisms → Bacteria → Acidobacteria	3565	Open in IMG/M
3300031754\|Ga0307475_10525198	Not Available	950	Open in IMG/M
3300031765\|Ga0318554_10431470	Not Available	747	Open in IMG/M
3300031768\|Ga0318509_10061040	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1952	Open in IMG/M
3300031768\|Ga0318509_10639393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	592	Open in IMG/M
3300031777\|Ga0318543_10105460	All Organisms → cellular organisms → Bacteria → Proteobacteria	1214	Open in IMG/M
3300031777\|Ga0318543_10558905	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031793\|Ga0318548_10192422	Not Available	1000	Open in IMG/M
3300031799\|Ga0318565_10076455	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300031799\|Ga0318565_10090127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300031820\|Ga0307473_10845299	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	656	Open in IMG/M
3300031821\|Ga0318567_10255702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	984	Open in IMG/M
3300031823\|Ga0307478_10028710	All Organisms → cellular organisms → Bacteria	3992	Open in IMG/M
3300031845\|Ga0318511_10133221	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300031845\|Ga0318511_10360437	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300031894\|Ga0318522_10063765	All Organisms → cellular organisms → Bacteria → Proteobacteria	1322	Open in IMG/M
3300031897\|Ga0318520_10390308	All Organisms → cellular organisms → Bacteria → Proteobacteria	850	Open in IMG/M
3300031941\|Ga0310912_10107793	All Organisms → cellular organisms → Bacteria → Proteobacteria	2062	Open in IMG/M
3300031947\|Ga0310909_10114324	Not Available	2184	Open in IMG/M
3300031954\|Ga0306926_12381680	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300032063\|Ga0318504_10130023	All Organisms → cellular organisms → Bacteria → Proteobacteria	1148	Open in IMG/M
3300032090\|Ga0318518_10099422	All Organisms → cellular organisms → Bacteria → Proteobacteria	1450	Open in IMG/M
3300032261\|Ga0306920_101688232	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300032261\|Ga0306920_104410399	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300032828\|Ga0335080_10158639	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300032892\|Ga0335081_10045314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6944	Open in IMG/M
3300032898\|Ga0335072_10667040	Not Available	1027	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.36%
Host-Associated	Host-Associated	10.96%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.62%
Plants	Host-Associated → Plants	10.96%
Aquatic	Environmental → Aquatic	2.74%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.08%
Peat	Environmental → Terrestrial → Peat	6.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.79%
Freshwater	Environmental → Aquatic → Freshwater	2.05%
Sediment	Environmental → Aquatic → Sediment	0.68%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%
Feedstock	Engineered → Solid Waste → Feedstock	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.33%
Loam	Environmental → Terrestrial → Soil → Loam	8.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%
Composting	Engineered → Solid Waste → Feedstock → Composting	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%
Unclassified	Engineered → Solid Waste → Feedstock → Composting → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	6.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.16%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.42%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.05%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.37%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.37%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Feedstock Adapted Compost	Engineered → Solid Waste → Feedstock → Composting → Unclassified → Feedstock Adapted Compost	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013059	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027664	Cellulose adapted compost microbial communities from Newby Island Compost Facility, Milpitas, CA, USA - BGW Initial Compost (SPAdes)	Engineered	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_01454030	2140918007	Soil	MDQIGVVGLSYRHASVEDVARFAIPKAEIEARLPELR
JGI12648J13191_10073931	3300001084	Forest Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAQIPACLPALRTLLRASEIL
JGI12635J15846_101906872	3300001593	Forest Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAQIPACLPALRTLLRASEILYIGT
Ga0062387_1017479912	3300004091	Bog Forest Soil	MHQIGVVGLSYRHAGVDEVARFSVPKAEVAARLPGLRDSLGVSEIFYV
Ga0066688_108813741	3300005178	Soil	MHQIGVVGLSYRHVGVEEVARFALPRAEIPARLPALRTLL
Ga0070710_113835783	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHAGVDQVARFAVPRAELPARLPQLRTQLQAAEVVYVGTC
Ga0070663_1019998032	3300005455	Corn Rhizosphere	MHQIGVVGLSYRHVGVDEVARFSVPKTDVAARLPALRDALGVSEVFYVG
Ga0070738_101446051	3300005531	Surface Soil	MHQIGVVGLSYRHAGIDDVARLSIPKADLGARLPALRQ
Ga0070734_107664571	3300005533	Surface Soil	MHQIGVVGLSYRHADVDEIARFTIPKADVPARLPALRERLGVAEL
Ga0070733_104988222	3300005541	Surface Soil	MHQIGVVGLSYRHAGVDAVARFALPRAEVAARLPQLRERLTAGEILYVGTCN
Ga0070732_103700051	3300005542	Surface Soil	MHQIGVVGLSYRHAGVEEVARFAVPRAEVPARLPALRALL
Ga0066700_104194801	3300005559	Soil	MHQIGVVGLSYRHVGVEEVARFALPRAEIPARLPALRTL
Ga0066708_100508231	3300005576	Soil	MHQIGVVGLSYRHAGVDQVARFAVPRTEVPARLPALRTLLK
Ga0070763_105674821	3300005610	Soil	MDHIGVVGLSYRHASVEDVARFAIPKADIEARLPEIRAALGADLVF
Ga0068856_1010603753	3300005614	Corn Rhizosphere	MHQIGVVGLSYRHVGVDEVARFSVPKTEVAERLPALREALGASEVFYVG
Ga0068856_1013337902	3300005614	Corn Rhizosphere	MHHIGVVGLSYRHAGVDEVARFSVPRAEVAPRLALLQSRL
Ga0068864_1010737533	3300005618	Switchgrass Rhizosphere	MHQIGVVGLSYRHVGVDEVARFSVPKTEVAARLPALRDALGVS
Ga0075522_105878561	3300006638	Arctic Peat Soil	MHQIGVVGLSYRHAGVDEVARFAVPKAEVAARLPALRDALGVAEIFYVGTCN
Ga0099795_100746093	3300007788	Vadose Zone Soil	MHQIGVVGLSYRHAGVDQVARFAVPRTEVPARLPALRTL
Ga0066710_1003951481	3300009012	Grasslands Soil	MHQIGVVGLSYRHAGVDQVARFAVPKTEVPARLPAL
Ga0105237_110124211	3300009545	Corn Rhizosphere	MHQIGVVGLSYRHVGVDEVARFSVPKTEVAARLPALRDALGVSEVFY
Ga0105238_113452342	3300009551	Corn Rhizosphere	MHQIGVVGLSYRHVGVDEVARFSVPKTDVAARLPALRDALGVSEVFYVGT
Ga0126380_110987821	3300010043	Tropical Forest Soil	MHQIGVVGLSYRHAGVEDVARFSMPRAEVPTRLPGLRAGLKAVELVYVGTCNR
Ga0126384_108793472	3300010046	Tropical Forest Soil	MHQIGVVGLSYRHAGVDEVARFSVPRAEVPARLPALRALLK
Ga0126318_107351793	3300010152	Soil	MHQIGAVGLSYRHAGIDDVARLTIPKADLETRLPALREALRVSELLYLG
Ga0134082_100619323	3300010303	Grasslands Soil	MHQIGVVGLSYRHAGADQVARFAVPRTEVPARLPALRTLLK
Ga0134062_100676361	3300010337	Grasslands Soil	MHQIGVVGLSYRHVGVEEVARFALPRAEIPARLPALRTLLKSAEILYVGT
Ga0126376_130789602	3300010359	Tropical Forest Soil	MQQIGLVGLSYRHVGVDQVARFAVPRPELAARLPLLRAHLKV
Ga0134128_121542691	3300010373	Terrestrial Soil	MHQIGVVGLSYRHAGIDEVARLSLPKAELEARLPALRQALG
Ga0126381_1001025543	3300010376	Tropical Forest Soil	MHQIGVVGLSYRHAAVDEVARFAVPRAEVPARLPALRTLLKASE
Ga0134126_120288392	3300010396	Terrestrial Soil	MHQIGVVGLSYRHAGIDDVARLSIPKADLEARLPSLRAALGVSELLYLGTC
Ga0134126_121739092	3300010396	Terrestrial Soil	MHQIGVVGLSYRHAGIDDVARLSIPKADLEARLPALR
Ga0105246_102608651	3300011119	Miscanthus Rhizosphere	MHQIGVVGLSYRHVGVDEVARFSVPKTDVAARLPALRDA
Ga0150985_1069524281	3300012212	Avena Fatua Rhizosphere	MHQIGVVGLSYRHVGVDEVARFSVPKTDVAARLPALRDALGVSEVFYV
Ga0137370_104411052	3300012285	Vadose Zone Soil	MHQIGVVGLSYRHAGVEQVARFAVPRTEGPSRLPALRTLLKA
Ga0137386_102764491	3300012351	Vadose Zone Soil	MHQLGVVGLSYRHAGVDEVARFSVPKTEVAARLPALRDTLGVSEV
Ga0137358_100257741	3300012582	Vadose Zone Soil	MHQIGVVGLSYRHAGVDQVARFAVPRTEVPARLPALRTLLKAAEILYVGTCN
Ga0137395_101885063	3300012917	Vadose Zone Soil	MHQIGVVGLSYRHVGVEEVARFALPRAEIPARLPALRALL
Ga0164301_108685362	3300012960	Soil	MHQIGVVGLSYRHAAVEEVARFAVPRAEVPARLPALRALLK
Ga0164301_116130512	3300012960	Soil	MHQIGVVGLSYRHAGVDQVARFAVPRVELPARLPQLRT
Ga0134087_100632131	3300012977	Grasslands Soil	MHQIGVVGLSYRHAGVDQVARFAVPRTEVPARLPALRT
Ga0154012_1476002	3300013059	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVALSYRHSGIDEVARLSIPKADLESRLASLREALQVS
Ga0157373_109867621	3300013100	Corn Rhizosphere	MHQIGVVGLSYRHAGVDEVARFALPKAEVAARLPALRDSLRASEILYVGT
Ga0157372_101397921	3300013307	Corn Rhizosphere	MHQIGAVGLSYRNAGIDEVARLSIPKGDLEARLPALRDAI
Ga0132255_1022615382	3300015374	Arabidopsis Rhizosphere	MHQIGVVGLSYRHAGVDEVARFAVPRADVPARLPALRALLKASEILYLGT
Ga0182036_105190152	3300016270	Soil	MQQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKASEILYVGT
Ga0182041_104260682	3300016294	Soil	MQQIGVVGLSYRHAGVEEVARFAVPRAEVPARLPALRAVLKASEILYVGTC
Ga0182033_113603253	3300016319	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPAL
Ga0182035_100573671	3300016341	Soil	MHQIGVVGLSYRHAGVDDVARFAVPRAEVPARLPALRALLKASEI
Ga0182035_101761801	3300016341	Soil	MHQIGVVGLSYRHAAVEEVARFAVPRAEVPARLPALRDLLKASETL
Ga0182035_102543991	3300016341	Soil	MHQIGVVGLSYRHAGVEEVARFAVPRAEVPARLPA
Ga0187802_101809421	3300017822	Freshwater Sediment	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLK
Ga0187779_111520381	3300017959	Tropical Peatland	MHQIGVVGLSYRHAGVDEVARFAVPRAEIAARLPELRVR
Ga0187778_100192891	3300017961	Tropical Peatland	MHQIGVVGLSYRHAGVADVARFAVPRAEVPARLPA
Ga0187778_107249773	3300017961	Tropical Peatland	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPTLRTLH
Ga0187781_105944381	3300017972	Tropical Peatland	MHQIGVVGLSYRHADVADVARFAVPRAEVPARLPA
Ga0187777_113374891	3300017974	Tropical Peatland	MHQIGVVGLSYRHAGVDEVARFAVPRAEITARLPELRVRLRA
Ga0187782_115795261	3300017975	Tropical Peatland	MHQIGVVGLSYRHAGVEEVARFSIPRAEVGARLPALRALLKASEVLYV
Ga0187767_103740331	3300017999	Tropical Peatland	MHQIGVVGLSYRHAGVDDLARFTVPREALSERLAALRALLPAAELLYIGT
Ga0187766_112629961	3300018058	Tropical Peatland	MHQIGVVGLSYRHAAVGEVARFALPRGEVPAFLPALRTSLKASEILYVGTCN
Ga0066669_100691355	3300018482	Grasslands Soil	MHQIGVVGLSYRHAGVDQVARFAVPRTEVPARLPALRTLLKA
Ga0197907_104122172	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHAGIDEVARLSIPKADLAARLPSLREALQVSELLYLG
Ga0197907_110599872	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHSGIDEVARLSIPKADLESRLASLREALQVSELLYLG
Ga0197907_112710272	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHAGVDDIARFSLPKAEVGARLPSLRDCLGA
Ga0206351_101012561	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHSGIDEVARLSIPKADLESRLASLREALQVSELLYL
Ga0206351_105933892	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHAGVDDIARFSLPKAEVGARLPS
Ga0206350_100249771	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGAVGLSYRHAGIDEVARLSISKDDLEARLPALREALKVSELLYLGTC
Ga0206353_100912011	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHAGVDEVARFALPKAEVAARLPALRECLRASEVL
Ga0206353_110775892	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MRQIGVVGLSYRHAGVDDIARFSLPKAQVAERLPRLRDCLGAGE
Ga0210407_110768581	3300020579	Soil	MHQIGVVGLSYRHAGVEEVARFAVPRTEVPARLPALR
Ga0210407_113871241	3300020579	Soil	MHQIGVVGLSYRHAGVDEVARFALPKAELAARLPALRDFLRA
Ga0210399_108877442	3300020581	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRTEVPARLPA
Ga0210395_109061272	3300020582	Soil	MHQIGVVGLSYRHAGVEEVARFAVPRAEVAARLPELRSRLNAAEILYV
Ga0210408_111310421	3300021178	Soil	MHQIGVVGLSYRHAGVDDIARFSLPKEEVGSRLPALRDWLRAGEVLYVGT
Ga0210388_112092721	3300021181	Soil	MHQIGVVGLSYRHVGVDEVARFALPKAEVAARLPA
Ga0213881_104728721	3300021374	Exposed Rock	MHQIGVVGLSYRHAGVEDVARFTMPRTEIAARLPALRVALGAAEV
Ga0210393_109806692	3300021401	Soil	MHQIGVVGLSYRHAGVDEVARFSLPRADVGARLCALRAHLKAAEILYVGT
Ga0210386_109307792	3300021406	Soil	MHQIGVVGLSYRHVGVDEVARFALPKAEVAARLPALRDLL
Ga0126371_100697144	3300021560	Tropical Forest Soil	MHQIGVVGLSYRHAGVDEVARFSVPRAEVPARLPALRALL
Ga0242648_10002101	3300022506	Soil	MHQIGVVGLSYRHAGVDAVARFALPRAEVAARLPQLRQRLNAAEILYV
Ga0242657_12420862	3300022722	Soil	MHQIGVVGLSYRHVGVDEVARFALPKAEIAARLPALR
Ga0207929_11104271	3300025505	Arctic Peat Soil	MDHIGVVGLSYRHASAEDVARFAIPKSEIEARLAEL
Ga0208078_10067572	3300025544	Arctic Peat Soil	MDQIGVVGLSYRHASVEDVARFAIPKADIEARLPQLRAALRG
Ga0207699_103320353	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHAGVDEVARFALPKAEVAARLPALR
Ga0207705_107261191	3300025909	Corn Rhizosphere	MHQIGVVGLSYRHVGVDEVARFSVPKTDVAARLPALR
Ga0207660_100347535	3300025917	Corn Rhizosphere	MHQIGVVGLSYRHAGVDDIARFSLPKEKVGARLPSLRDCLG
Ga0207652_114263932	3300025921	Corn Rhizosphere	MHQIGVVGLSYRHAGVDDIARFSLPKAEVGARLPSL
Ga0207694_117846101	3300025924	Corn Rhizosphere	MHQIGVVGLSYRHVGVDEVARFALPKAEVAARLPALRDYL
Ga0207700_116850061	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MHQIGVVGLSYRHAGVDEVARFALPKAEVAARLPALRDCLRASEVLY
Ga0207658_119658661	3300025986	Switchgrass Rhizosphere	MHQIGVVGVSYRHARVDDVARFALPKADVAARLPALRADL
Ga0207702_113962553	3300026078	Corn Rhizosphere	MHQIGVVGLSYRHANVAEVARFAVPRAEVPPRLPALRALL
Ga0209057_12177722	3300026342	Soil	MHQIGVVGLSYRHVGVEEVARFALPRAEIPARLPAL
Ga0208725_10674091	3300027158	Forest Soil	MHQIGVVGLSYRHAGIDEVARLSIAKVDLEARLQALREALGVSELLYLG
Ga0208988_10272353	3300027633	Forest Soil	MHQIGVVGLSYRHAGVDEVARFAVPRTEVPARLPALRTLLKAAE
Ga0207873_11065963	3300027664	Feedstock Adapted Compost	MHQIGIVGLSYRHASTDEVARFSIPKADVPARLPELREALGVSELIYL
Ga0209167_101419611	3300027867	Surface Soil	MHQIGVVGLSYRHAGVDAVARLAVPRAEVPARLPALRKELKAAEILYVGT
Ga0209068_102355291	3300027894	Watersheds	MHQIGVVGLSYRHAGVEEVARFAVPRTEVPVRLPALRTLLKAAEIL
Ga0209006_113546902	3300027908	Forest Soil	MHQIGVVGLSYRHAGVDEVARFALPKAEVAARLPALRDSLRA
Ga0268265_125321281	3300028380	Switchgrass Rhizosphere	MVSSGPMDQIGVVGLSYRHAGADDIAGFTLPKDDVAARLAALRT
Ga0302227_102520142	3300028795	Palsa	MVSFTLMDHIGVVGLSYRHASAEEVARFAIPKADIEVRLPELRAALG
Ga0308309_110831181	3300028906	Soil	MHQIGVVGLSYRHAGVEDVARLSLPRAELSARLGHLRARLHA
Ga0311369_102253062	3300029910	Palsa	MDHIGVVGLSYRHASVEDVARFAIPRADIEARLPELRVALQGA
Ga0311339_116652171	3300029999	Palsa	MHQIGVVGLSYRHAGLEQVARFAVPRTEVPARLPGLRTHLKAAELLYVGT
Ga0311338_100178991	3300030007	Palsa	MDHIGVVGLSYRHASVEDVARFAIPRADIEARLPELRVAL
Ga0302181_104463761	3300030056	Palsa	MHQIGVVGLSYRHAGLEQVARFAVPRTEVPARLPGLRTHLKAAELLY
Ga0311370_100555191	3300030503	Palsa	MVSFTLMDHIGVVGLSYRHASAEEVARFAIPKADIEARLPELRAA
Ga0311372_110131881	3300030520	Palsa	MHQIGVVGLSYRHAGLEQVARFAVPRTEVPARLPGLRTHLKAAELLYVG
Ga0311357_114410392	3300030524	Palsa	MHQIGVVGLSYRHVGVDEVARFALPKAEIAARLPA
Ga0311354_103185111	3300030618	Palsa	MHQIGVVGLSYRHAGVEEVARLSLPRGEVGARLGHLRGELRAAELLYLGTC
Ga0302310_102311842	3300030737	Palsa	MDHIGVVGLSYRHASVEDVARFAIPRADIEARLPELRVALQG
Ga0170824_1270227281	3300031231	Forest Soil	MHQIGVVGLSYRHVGVDEVARFSVPKTEVAARLPALRDAL
Ga0170819_103272111	3300031469	Forest Soil	MHQIGVVGLSYRHVGVDEVARFSVPKTEIAARLPAL
Ga0318516_104001151	3300031543	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKASE
Ga0318541_102052162	3300031545	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKASEILY
Ga0318574_108274441	3300031680	Soil	MHQIGVVGLSYRHAGVDEIARLTLPRAELPQRLPVLRAQLAAAEVVY
Ga0310686_1098154801	3300031708	Soil	MDHIGVVGLSYRHASVEDVARFAIPKADIEARLPELRAA
Ga0318496_104962231	3300031713	Soil	MHQIGVVGLSYRHAGVDEVARFAMPRAEVPLRLPALRGLLKASEILYV
Ga0307476_112113292	3300031715	Hardwood Forest Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKA
Ga0318501_101140773	3300031736	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRTLLKASEI
Ga0307477_100326161	3300031753	Hardwood Forest Soil	MHQIGVVGLSYRHAGVEEVARFAVPRAEVAVRLPELRSR
Ga0307475_105251981	3300031754	Hardwood Forest Soil	MHQIGVVGLSYRHAGVEEVARFAVPRAELPARLPALRTLLK
Ga0318554_104314701	3300031765	Soil	MHQIGVVGLSYRHVGVDEVARFSLPRADVPLRLPQLRAQLNGAEI
Ga0318509_100610401	3300031768	Soil	MHQIGVVGVSYRHAAVEEVARFAVPRTEVAARLPALRA
Ga0318509_106393931	3300031768	Soil	MHQIGVVGLSYRHAGVDEIARLTLPRAELPQRLPVLRAQLAAAEVVYLA
Ga0318543_101054601	3300031777	Soil	MQQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALR
Ga0318543_105589052	3300031777	Soil	MQQIGVVGLSYRHAGVEEVARFAVPRAEVPARLPALRA
Ga0318548_101924221	3300031793	Soil	MDQIGVVGLSYRHAGVDEVARFAVPRAEVPARLSALRALLKASE
Ga0318565_100764553	3300031799	Soil	MQQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKASEILYVGTSA
Ga0318565_100901271	3300031799	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKASEILYVGTCN
Ga0307473_108452992	3300031820	Hardwood Forest Soil	MHQIGVVGLSYRHAGVEEVARFAVPRTEVPARLPELR
Ga0318567_102557021	3300031821	Soil	MHQIGVVGLSYRHAGVDEIARLTLPRAELPQRLPVLRAQLAAAE
Ga0307478_100287105	3300031823	Hardwood Forest Soil	MHQIGVVGLSYRHAGVEEVARFAVPRAEVPARLPALRALLKASEILY
Ga0318511_101332211	3300031845	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPA
Ga0318511_103604371	3300031845	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLRASEIL
Ga0318522_100637651	3300031894	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKASEILYVG
Ga0318520_103903081	3300031897	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKASEILYV
Ga0310912_101077931	3300031941	Soil	MHQIGVVGLSYRHAGVEEVARFAVPRAEVPARLPAL
Ga0310909_101143244	3300031947	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALLKAAEILYVG
Ga0306926_123816802	3300031954	Soil	MHQIGVVGLSHRHAGVDDVARFTLPKAELAARLRALR
Ga0318504_101300233	3300032063	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRTLLKASEILYVG
Ga0318518_100994221	3300032090	Soil	MQQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRALL
Ga0306920_1016882321	3300032261	Soil	MHQIGVVGLSYRHAGVDDVARFAVPRAEVPARLPALRGLLKAAEILYVGT
Ga0306920_1044103991	3300032261	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEVPARLPALRTLLRASEILYVS
Ga0335080_101586393	3300032828	Soil	MHQIGVVGLSYRHAGVEEVARFSLPRAEVVSRIIALRSSLG
Ga0335081_100453141	3300032892	Soil	MHQIGVVGLSYRHAGVDEVARFAVPRAEIAARLPELRVRLR
Ga0335072_106670403	3300032898	Soil	MHQIGVVGLSYRHAGIDDVARLSIPRSDLEARLPSLREALGVSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049584

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences