NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049535

Metagenome / Metatranscriptome Family F049535

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049535
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 78 residues
Representative Sequence MRRHTAGSRASTKSIHEPARSLRRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Number of Associated Samples 131
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.93 %
% of genes near scaffold ends (potentially truncated) 23.97 %
% of genes from short scaffolds (< 2000 bps) 65.07 %
Associated GOLD sequencing projects 120
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.945 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(23.288 % of family members)
Environment Ontology (ENVO) Unclassified
(41.096 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.329 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 33.75%    β-sheet: 0.00%    Coil/Unstructured: 66.25%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF00685Sulfotransfer_1 15.75
PF01541GIY-YIG 6.16
PF14566PTPlike_phytase 5.48
PF02082Rrf2 4.79
PF13379NMT1_2 2.05
PF00005ABC_tran 2.05
PF05192MutS_III 2.05
PF07396Porin_O_P 1.37
PF05188MutS_II 1.37
PF00528BPD_transp_1 1.37
PF07313DUF1460 1.37
PF13481AAA_25 1.37
PF01546Peptidase_M20 0.68
PF02806Alpha-amylase_C 0.68
PF02780Transketolase_C 0.68
PF13692Glyco_trans_1_4 0.68
PF13181TPR_8 0.68
PF00916Sulfate_transp 0.68
PF12704MacB_PCD 0.68
PF13370Fer4_13 0.68
PF13480Acetyltransf_6 0.68
PF00381PTS-HPr 0.68
PF01624MutS_I 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG2524Predicted transcriptional regulator, contains C-terminal CBS domainsTranscription [K] 4.79
COG0640DNA-binding transcriptional regulator, ArsR familyTranscription [K] 4.79
COG2378Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domainsTranscription [K] 4.79
COG1414DNA-binding transcriptional regulator, IclR familyTranscription [K] 4.79
COG1725DNA-binding transcriptional regulator YhcF, GntR familyTranscription [K] 4.79
COG1959DNA-binding transcriptional regulator, IscR familyTranscription [K] 4.79
COG2186DNA-binding transcriptional regulator, FadR familyTranscription [K] 4.79
COG2188DNA-binding transcriptional regulator, GntR familyTranscription [K] 4.79
COG0249DNA mismatch repair ATPase MutSReplication, recombination and repair [L] 4.11
COG3746Phosphate-selective porinInorganic ion transport and metabolism [P] 1.37
COG1925HPr or related phosphotransfer proteinSignal transduction mechanisms [T] 0.68
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 0.68
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 0.68
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.68
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 0.68
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.68
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.95 %
UnclassifiedrootN/A2.05 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002896|JGI24802J43972_1011570All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia660Open in IMG/M
3300002899|JGIcombinedJ43975_10108788All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae513Open in IMG/M
3300003911|JGI25405J52794_10008162All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1949Open in IMG/M
3300004633|Ga0066395_10177921All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium1098Open in IMG/M
3300005175|Ga0066673_10005071All Organisms → cellular organisms → Bacteria5233Open in IMG/M
3300005176|Ga0066679_10225126All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1202Open in IMG/M
3300005177|Ga0066690_10178751All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1405Open in IMG/M
3300005181|Ga0066678_10045888All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2466Open in IMG/M
3300005181|Ga0066678_10128511All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1564Open in IMG/M
3300005186|Ga0066676_10620492All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae733Open in IMG/M
3300005289|Ga0065704_10155339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae1395Open in IMG/M
3300005293|Ga0065715_10006220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis5981Open in IMG/M
3300005294|Ga0065705_10189825All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae1491Open in IMG/M
3300005367|Ga0070667_100583958All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1029Open in IMG/M
3300005434|Ga0070709_10887117All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae704Open in IMG/M
3300005535|Ga0070684_100735384All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium921Open in IMG/M
3300005554|Ga0066661_10841589All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae536Open in IMG/M
3300005556|Ga0066707_10698017Not Available636Open in IMG/M
3300005559|Ga0066700_10003696All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia7131Open in IMG/M
3300005560|Ga0066670_10051293All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2140Open in IMG/M
3300005560|Ga0066670_10786393All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae576Open in IMG/M
3300005561|Ga0066699_10411776All Organisms → cellular organisms → Bacteria → Proteobacteria967Open in IMG/M
3300005561|Ga0066699_10784402All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae672Open in IMG/M
3300005566|Ga0066693_10004225All Organisms → cellular organisms → Bacteria → Proteobacteria3660Open in IMG/M
3300005576|Ga0066708_10266157All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1092Open in IMG/M
3300005587|Ga0066654_10080755All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae1524Open in IMG/M
3300005598|Ga0066706_10671991All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium822Open in IMG/M
3300005602|Ga0070762_10414492All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium870Open in IMG/M
3300005713|Ga0066905_100140480All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1722Open in IMG/M
3300005764|Ga0066903_100025311All Organisms → cellular organisms → Bacteria6512Open in IMG/M
3300005937|Ga0081455_10000743All Organisms → cellular organisms → Bacteria42381Open in IMG/M
3300005937|Ga0081455_10015192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis7490Open in IMG/M
3300005937|Ga0081455_10022048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis5962Open in IMG/M
3300006028|Ga0070717_10838468All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae836Open in IMG/M
3300006032|Ga0066696_10043405All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2484Open in IMG/M
3300006046|Ga0066652_100071553All Organisms → cellular organisms → Bacteria2703Open in IMG/M
3300006791|Ga0066653_10047521All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1772Open in IMG/M
3300006796|Ga0066665_10506695All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium988Open in IMG/M
3300006800|Ga0066660_10636993All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae887Open in IMG/M
3300006969|Ga0075419_10970153All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae617Open in IMG/M
3300007258|Ga0099793_10344459All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium728Open in IMG/M
3300009012|Ga0066710_100059248All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus4816Open in IMG/M
3300009012|Ga0066710_103821413All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae565Open in IMG/M
3300009090|Ga0099827_11592753All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae569Open in IMG/M
3300009137|Ga0066709_101738263All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae881Open in IMG/M
3300009147|Ga0114129_10004430All Organisms → cellular organisms → Bacteria19823Open in IMG/M
3300009802|Ga0105073_1010630All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia830Open in IMG/M
3300010046|Ga0126384_10117123All Organisms → cellular organisms → Bacteria1997Open in IMG/M
3300010047|Ga0126382_10010239All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia4466Open in IMG/M
3300010048|Ga0126373_11135381All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae847Open in IMG/M
3300010303|Ga0134082_10007616All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3874Open in IMG/M
3300010304|Ga0134088_10244564All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300010322|Ga0134084_10067690All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1085Open in IMG/M
3300010326|Ga0134065_10001287All Organisms → cellular organisms → Bacteria5802Open in IMG/M
3300010329|Ga0134111_10140158All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium951Open in IMG/M
3300010335|Ga0134063_10183813All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium979Open in IMG/M
3300010336|Ga0134071_10687412All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae541Open in IMG/M
3300010362|Ga0126377_10037124All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia4165Open in IMG/M
3300010366|Ga0126379_10412413All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1401Open in IMG/M
3300010366|Ga0126379_10823328All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1028Open in IMG/M
3300011119|Ga0105246_12485829All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae510Open in IMG/M
3300012198|Ga0137364_10487338All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae926Open in IMG/M
3300012199|Ga0137383_10002008All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus12239Open in IMG/M
3300012203|Ga0137399_10063280All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2747Open in IMG/M
3300012207|Ga0137381_10283194All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1442Open in IMG/M
3300012208|Ga0137376_10437839All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1135Open in IMG/M
3300012285|Ga0137370_10003728All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia6742Open in IMG/M
3300012349|Ga0137387_11078260All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae573Open in IMG/M
3300012354|Ga0137366_10028568All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae4333Open in IMG/M
3300012357|Ga0137384_11096290All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae638Open in IMG/M
3300012387|Ga0134030_1020907All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae570Open in IMG/M
3300012494|Ga0157341_1051317All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300012891|Ga0157305_10084097All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae755Open in IMG/M
3300012907|Ga0157283_10239330All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae596Open in IMG/M
3300012912|Ga0157306_10056247All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1008Open in IMG/M
3300012923|Ga0137359_10090825All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2692Open in IMG/M
3300012923|Ga0137359_11788321All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae501Open in IMG/M
3300012929|Ga0137404_10810839All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium851Open in IMG/M
3300012957|Ga0164303_10003659All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia4668Open in IMG/M
3300012976|Ga0134076_10587039Not Available519Open in IMG/M
3300012977|Ga0134087_10065877All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1458Open in IMG/M
3300012989|Ga0164305_10823360All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium772Open in IMG/M
3300013105|Ga0157369_11596600All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae663Open in IMG/M
3300015053|Ga0137405_1265394All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus5384Open in IMG/M
3300015077|Ga0173483_10094208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae1235Open in IMG/M
3300015357|Ga0134072_10062437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1064Open in IMG/M
3300015373|Ga0132257_100321690All Organisms → cellular organisms → Bacteria1863Open in IMG/M
3300017659|Ga0134083_10027942All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2038Open in IMG/M
3300018081|Ga0184625_10200028All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae1047Open in IMG/M
3300018431|Ga0066655_10150072All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1382Open in IMG/M
3300018433|Ga0066667_10115566All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1822Open in IMG/M
3300018433|Ga0066667_11421948All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae610Open in IMG/M
3300018433|Ga0066667_11611434All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae578Open in IMG/M
3300018433|Ga0066667_11701830All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae566Open in IMG/M
3300018468|Ga0066662_10017588All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3919Open in IMG/M
3300018482|Ga0066669_10035381All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3004Open in IMG/M
3300018482|Ga0066669_10390783All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1174Open in IMG/M
3300018482|Ga0066669_10892103All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae795Open in IMG/M
3300019866|Ga0193756_1029309All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae776Open in IMG/M
3300019876|Ga0193703_1052356All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae623Open in IMG/M
3300019877|Ga0193722_1000015All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae44790Open in IMG/M
3300019882|Ga0193713_1003925All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus4769Open in IMG/M
3300020018|Ga0193721_1005801All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3226Open in IMG/M
3300020018|Ga0193721_1010304All Organisms → cellular organisms → Bacteria2451Open in IMG/M
3300020022|Ga0193733_1033279All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1456Open in IMG/M
3300023071|Ga0247752_1083995All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae535Open in IMG/M
3300025910|Ga0207684_10995549All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae701Open in IMG/M
3300025915|Ga0207693_10071275All Organisms → cellular organisms → Bacteria → Proteobacteria2720Open in IMG/M
3300025916|Ga0207663_10001921All Organisms → cellular organisms → Bacteria9841Open in IMG/M
3300025922|Ga0207646_10135070All Organisms → cellular organisms → Bacteria2221Open in IMG/M
3300025926|Ga0207659_10509258All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae1020Open in IMG/M
3300025930|Ga0207701_10001159All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia27892Open in IMG/M
3300025986|Ga0207658_11035821All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae749Open in IMG/M
3300026301|Ga0209238_1045196All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1595Open in IMG/M
3300026305|Ga0209688_1004623All Organisms → cellular organisms → Bacteria → Proteobacteria2460Open in IMG/M
3300026309|Ga0209055_1205277All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae602Open in IMG/M
3300026310|Ga0209239_1115160All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1122Open in IMG/M
3300026314|Ga0209268_1087026All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium895Open in IMG/M
3300026324|Ga0209470_1008890All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia6119Open in IMG/M
3300026324|Ga0209470_1011276All Organisms → cellular organisms → Bacteria5287Open in IMG/M
3300026327|Ga0209266_1115949All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1145Open in IMG/M
3300026329|Ga0209375_1015422All Organisms → cellular organisms → Bacteria4552Open in IMG/M
3300026523|Ga0209808_1035416All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2375Open in IMG/M
3300026524|Ga0209690_1007229All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae6121Open in IMG/M
3300026538|Ga0209056_10041443All Organisms → cellular organisms → Bacteria4217Open in IMG/M
3300026548|Ga0209161_10026468All Organisms → cellular organisms → Bacteria4073Open in IMG/M
3300026552|Ga0209577_10005657All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia11635Open in IMG/M
3300026656|Ga0208578_100532All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium817Open in IMG/M
3300026716|Ga0208344_102095All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae583Open in IMG/M
3300026734|Ga0208211_105036All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae524Open in IMG/M
3300026779|Ga0207471_103249All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae591Open in IMG/M
3300027717|Ga0209998_10071171All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae832Open in IMG/M
3300027948|Ga0209858_1005238All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia926Open in IMG/M
3300028791|Ga0307290_10084093All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1158Open in IMG/M
3300028807|Ga0307305_10209523All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia895Open in IMG/M
3300028811|Ga0307292_10031588All Organisms → cellular organisms → Bacteria1919Open in IMG/M
3300028828|Ga0307312_10000441All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia19435Open in IMG/M
3300028881|Ga0307277_10099708All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1231Open in IMG/M
3300028906|Ga0308309_10055899All Organisms → cellular organisms → Bacteria2871Open in IMG/M
3300030923|Ga0138296_1591866All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae533Open in IMG/M
3300030945|Ga0075373_11596185All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae523Open in IMG/M
3300030968|Ga0075376_11532744All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Candidatus Methylacidithermus → Candidatus Methylacidithermus pantelleriae548Open in IMG/M
3300031057|Ga0170834_104118101All Organisms → cellular organisms → Bacteria5570Open in IMG/M
3300031912|Ga0306921_10003162All Organisms → cellular organisms → Bacteria16673Open in IMG/M
3300033412|Ga0310810_10061258All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia4563Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil23.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.01%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.59%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil8.22%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.11%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.11%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere2.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.05%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.05%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.05%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.37%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.37%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.37%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.37%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.68%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002896Soil microbial communities from Manhattan, Kansas, USA - Sample 300um NexteraEnvironmentalOpen in IMG/M
3300002899Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)EnvironmentalOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009802Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012387Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019876Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026656Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN577 (SPAdes)EnvironmentalOpen in IMG/M
3300026716Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN592 (SPAdes)EnvironmentalOpen in IMG/M
3300026734Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN393 (SPAdes)EnvironmentalOpen in IMG/M
3300026779Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027948Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030923Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030945Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030968Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24802J43972_101157013300002896SoilMRRHIAGSRASTKSIHEPARSLHRFASLLSTFAIVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLH
JGIcombinedJ43975_1010878813300002899SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAVVAGAHDKRRDQLSRESETFGLRLFFGPVFNEANEPSSTC
JGI25405J52794_1000816233300003911Tabebuia Heterophylla RhizosphereMRRHTAGSRVSTKSIHEPARSLHRLASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0066395_1017792113300004633Tropical Forest SoilMRRRTAGSRASTKSIHEPARSLRRFASLLSTFSPLAGVTAKTRGQLSRESETFVVCVYLFGPVFNEANEPSSTCRLRFQR*
Ga0066673_1000507123300005175SoilMRRHTAGSRASTKSIHEPVRSLHRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLCFQR*
Ga0066679_1022512613300005176SoilMRRHTAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTC
Ga0066690_1017875123300005177SoilMRRRTTGSRASTKSIHKPARSLRRFASLLSTFAAVAGASVKRRGQLSRESETFVVCVYFFGPVFNEANEPSSTCRLRFQR*
Ga0066678_1004588843300005181SoilMRRHTAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066678_1012851133300005181SoilMRRRTANSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066676_1062049213300005186SoilMRRRTADSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQ
Ga0065704_1015533933300005289Switchgrass RhizosphereMRRHIADSRASTKSIHESAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSS
Ga0065715_1000622023300005293Miscanthus RhizosphereMHRRTAGSRASTKSIHKPARSLRRFASLLSSFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0065705_1018982553300005294Switchgrass RhizosphereMRRHIADSRASTKSIHESAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNE
Ga0070667_10058395823300005367Switchgrass RhizosphereMRRHIAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0070709_1088711713300005434Corn, Switchgrass And Miscanthus RhizosphereMRRHTAGSRASTKSIHEPARSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGSVFNEANEPSSACRLRFQR*
Ga0066681_1073389613300005451SoilMRRHIAGSRASTKSIHEPARSLRRFASLLSTFSPLAGVTAKTRGQLSRESETFVVCVYLFGPVFNEANEPSSTC
Ga0070684_10073538423300005535Corn RhizosphereMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066661_1084158913300005554SoilMRRHTAGSRASTKSIHESARSLHRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066707_1069801713300005556SoilMRRRTADSRASTKSIHKSARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQ
Ga0066700_1000369653300005559SoilVKIFKEPTLRRHIANSRASAKSIHEPARSLRRFASLLSTFAAVAGVQLQRRGQLSRESEIFVICVYLFGPVFYEANEPSSTCRLRF*
Ga0066670_1005129323300005560SoilMRRRTADSRASTKSIHKSARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066670_1078639313300005560SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSPFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066699_1041177613300005561SoilMRRHTARSRASTKSIHEPVRSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTC
Ga0066699_1078440223300005561SoilMRRRTTGSRASTKSIHKPARSLRRFASLLSTFAAVQASSVKRRGQLSRESETFVVCVYFFGPVFNEANEPSSTCRLRFQR*
Ga0066693_1000422533300005566SoilMRRHTASSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0066708_1026615713300005576SoilMRRRTARSRASTKSIHKPARSLRRFASLLSSFATVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRL
Ga0066654_1008075523300005587SoilMRRHTAGSRASTKSIHEPVRSLHRFASLLSSFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLCFQR*
Ga0066706_1067199123300005598SoilMRRRTADSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTC
Ga0070762_1041449213300005602SoilMRRHIAGSRASTKSIHEPAWSLPRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066905_10014048023300005713Tropical Forest SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPLFNEANEPSSTCRLRFQR*
Ga0066903_10002531143300005764Tropical Forest SoilMRRHTANSRASTKSIHRSVRSPHRSASLLSTFAVVAGIPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLHFRR*
Ga0081455_10000743223300005937Tabebuia Heterophylla RhizosphereMRRHTAGSRASTKSIHEPARSLHRFASLLSTFAVVAGVPRQMSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLHFER*
Ga0081455_1001519233300005937Tabebuia Heterophylla RhizosphereMRRHTAGSRVSTKSIHEPARSLHRLASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0081455_1002204823300005937Tabebuia Heterophylla RhizosphereMRRHTAGSRASTKSIHEPARSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0070717_1083846823300006028Corn, Switchgrass And Miscanthus RhizosphereMRRHTAGSRASTKSIHESVRSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0066696_1004340523300006032SoilMRRRTADSRASTKSIHESARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066652_10007155343300006046SoilMRRHIAGSRASTKSIHEPARSLRRLASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGSVFNEANEPSSTCRLRFQQ*
Ga0066653_1004752123300006791SoilMRRRTADSRASTKSIRESARSLRRLASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066665_1050669513300006796SoilMRRRTADSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCR
Ga0066660_1063699323300006800SoilMRRHTARSRASTKSIHEPVRSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLCFQR*
Ga0075419_1097015313300006969Populus RhizosphereMRRYTAGSRASTKSIHEPARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLHFER*
Ga0099793_1034445923300007258Vadose Zone SoilMRRHIADSRASTKSIHKPARSLRRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0066710_10005924823300009012Grasslands SoilMRRHTAGSRASTKSIHEPVRSLHRFASLLSSFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLCFQR
Ga0066710_10382141313300009012Grasslands SoilMRRRTADSRASTKSIHKSARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTC
Ga0099827_1159275313300009090Vadose Zone SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0066709_10173826313300009137Grasslands SoilMRRHIADSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0114129_10004430123300009147Populus RhizosphereMRRYTAGSRASTKSIHEPARSLRRFASLLSTSAVVAGVPRQMSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLHFER*
Ga0105073_101063013300009802Groundwater SandMRRHTTGSRASTKSIHEPARSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0126384_1011712323300010046Tropical Forest SoilMRRHTADSRTSTKSIHKPARSFRRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0126382_1001023933300010047Tropical Forest SoilMRRHTVNSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCHLRFQR*
Ga0126373_1113538113300010048Tropical Forest SoilMRRHIASSRASTKSIHEPVRSLHRSASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANGPSSTCRLHFRR*
Ga0134082_1000761623300010303Grasslands SoilMRRHTADSRASTKSIHKPARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0134088_1024456423300010304Grasslands SoilMRRHTASSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEP
Ga0134084_1006769013300010322Grasslands SoilMRRHTASSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPS
Ga0134065_1000128753300010326Grasslands SoilMRRHTASSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0134111_1014015823300010329Grasslands SoilMRRHTADSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0134063_1018381313300010335Grasslands SoilMRRRTAASRASTKSIHKSARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0134071_1068741213300010336Grasslands SoilMRRRTADSRASTKSIHKPARSPRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEP
Ga0126377_1003712433300010362Tropical Forest SoilMRRHTVNSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPLFNEANEPSSTCHLRFQR*
Ga0126379_1041241323300010366Tropical Forest SoilMRRRIADSRASTKSIHEPARSHRRFASLLSTFSPLAGVTAKTSRSIKPRERDLRCLRLFVWSDFNEANEPSSTCRLRFQR*
Ga0126379_1082332823300010366Tropical Forest SoilMRRHTADSQASTKSIHEPARSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0105246_1248582913300011119Miscanthus RhizosphereMRRRTTGSRASTNFLHHPARSLRRLISLLSTFGAVAGVQLQTSRSIKPRERDLRCLRLFFGPVFNEATHPSSACRLRFQRCVEASTPPIFCA*
Ga0137364_1048733833300012198Vadose Zone SoilMRRRTADSRASTKSIRESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRL
Ga0137383_10002008103300012199Vadose Zone SoilMRRHTAGSRASTKSIHEPARSLHRFASLLSTFAVVAGVPRQMSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0137399_1006328043300012203Vadose Zone SoilMRRHTTGSRASTKSIHEPARSLRRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0137381_1028319423300012207Vadose Zone SoilMRRHIADSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQQ*
Ga0137376_1043783923300012208Vadose Zone SoilMRRRTADSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0137370_1000372853300012285Vadose Zone SoilMRRHTAGSRASTKSIHEPVRSLHRFASLLSTFAGVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEAN
Ga0137387_1107826013300012349Vadose Zone SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSS
Ga0137366_1002856813300012354Vadose Zone SoilMRRHTAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0137384_1109629013300012357Vadose Zone SoilMRRHTAGSRAPTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0134030_102090713300012387Grasslands SoilMRRRTANSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANE
Ga0157341_105131713300012494Arabidopsis RhizosphereMRRHIADSRASTKSIHEPVWSLHRFASLLSTFAVVAGVPRQTSRSIKPRDLDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0157305_1008409723300012891SoilMRRHIADSRASTKSIHESAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANDPSSACRLRFQR*
Ga0157283_1023933023300012907SoilMRRHIADSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0157306_1005624713300012912SoilMRRHIAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLLFGPVFNEANEPSSTCRLRFQR*
Ga0137359_1009082543300012923Vadose Zone SoilMRRHTADSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0137359_1178832113300012923Vadose Zone SoilMRRRTARSRASTKSIHKPARSLRRFASLLSSFATVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRPRF*
Ga0137404_1081083923300012929Vadose Zone SoilMRRRTANSRASTKSIHKPARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0164303_1000365943300012957SoilMRRRTARSRASTKSIHKPARSLRRSASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0134076_1058703913300012976Grasslands SoilMRRRTADSRASTKSIHESARSLRRLAGLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0134087_1006587713300012977Grasslands SoilMRRRTADSRASTKSIHKPARSLRRFVSLLSTFGAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANE
Ga0164305_1082336023300012989SoilMRRRTARSRASTKSIHKPARSLRRSASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANE
Ga0157369_1159660023300013105Corn RhizosphereMRRHTAGSRASTKSIREPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR*
Ga0137405_126539453300015053Vadose Zone SoilMRRHTAGSRASAKSIHKPARSLRRFASLLSAFAAVAGVQRQTSRSIKPRERDLRCLRLCFGPVFNEANEPSSTCRLRFQR*
Ga0173483_1009420823300015077SoilMRRHTASSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR*
Ga0134072_1006243723300015357Grasslands SoilMRRHTAGSRASTKSIHEPVRSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEAN
Ga0132257_10032169013300015373Arabidopsis RhizosphereMRRHIAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQQ*
Ga0134083_1002794233300017659Grasslands SoilMRRRTADSRASTKSIHESARSLRRLASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0184625_1020002823300018081Groundwater SedimentMRRHIADSRASTKSIHEPVRSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQQ
Ga0066655_1015007243300018431Grasslands SoilMRRRTANSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEA
Ga0066667_1011556613300018433Grasslands SoilMRRHTAGSRASTKSIHEPVRSLHRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTC
Ga0066667_1142194813300018433Grasslands SoilMRRRTARSRASTKSIHKPARSLRRFASLLSSFATVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTC
Ga0066667_1161143423300018433Grasslands SoilMRRHIADSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0066667_1170183013300018433Grasslands SoilMRRRTADSRASTKSIHKSARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCR
Ga0066662_1001758823300018468Grasslands SoilMRRHTAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0066669_1003538113300018482Grasslands SoilMRRHTAGSRASTKSIHEPVRSLHRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLCFQR
Ga0066669_1039078323300018482Grasslands SoilMRRRTANSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0066669_1089210313300018482Grasslands SoilMRRHTADSRASTKSIHKPARSLLRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSST
Ga0193756_102930923300019866SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSPFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQQ
Ga0193703_105235613300019876SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQQ
Ga0193722_1000015463300019877SoilMRRHTTGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQQ
Ga0193713_100392543300019882SoilMRRHIAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0193721_100580123300020018SoilMRRHIAGSRAPTKSIHEPARSPRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQQ
Ga0193721_101030423300020018SoilMRRRTAGSRASTKSIHKPARSLRRLASLLSSFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0193733_103327913300020022SoilMHRRTAGSRASTKSIHKPARSLRRFASLLSSFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0247752_108399513300023071SoilMRRRIADSRASTNFLHHPARSLRRLISLLSTFGAVAGVQLQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0207684_1099554913300025910Corn, Switchgrass And Miscanthus RhizosphereMRRHTADSRASTKSIHEPARSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR
Ga0207693_1007127513300025915Corn, Switchgrass And Miscanthus RhizosphereMRRHTAGSRASTKSIHESARSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGSVFNEANEPSSACRLRFQR
Ga0207663_1000192153300025916Corn, Switchgrass And Miscanthus RhizosphereMRRHTAGSRASTKSIHESVRSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGSVFNEANEPSSTCRLRFQQ
Ga0207646_1013507013300025922Corn, Switchgrass And Miscanthus RhizosphereMRRHTAGSRASTKSIHEPARSLRRFASLLSTLAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSS
Ga0207659_1050925813300025926Miscanthus RhizosphereMRRHTASSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCR
Ga0207701_10001159253300025930Corn, Switchgrass And Miscanthus RhizosphereMRRHTASSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQQ
Ga0207658_1103582113300025986Switchgrass RhizosphereMRRHIAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0209238_104519613300026301Grasslands SoilMRRHTAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLCFQR
Ga0209688_100462333300026305SoilMRRHTASSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR
Ga0209055_120527713300026309SoilMRRHTAGSRASTKSIHESARSLHRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0209239_111516023300026310Grasslands SoilMRRHTADSRASTKSIHKPARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0209268_108702623300026314SoilMRRHTANSRASTKSIHESARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0209470_100889053300026324SoilMRRHTAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR
Ga0209470_101127653300026324SoilMRRRTADSRASTKSIHKSARSLRRFASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0209266_111594923300026327SoilMRRHTTDSRASTKSIHKPARSLRRLASLLSTFAAVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0209375_101542213300026329SoilMRRRTADSRASTKSIHESARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0209808_103541623300026523SoilMRRHTAGSRASTKSIHEPVRSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLCFQR
Ga0209690_100722913300026524SoilMRRHTAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPS
Ga0209056_1004144313300026538SoilMRRHTASSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSS
Ga0209161_1002646843300026548SoilMRRHTAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSS
Ga0209577_1000565743300026552SoilMRRHTARSRASTKSIHEPVRSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLCFQR
Ga0208578_10053213300026656SoilMRRHTADSRASTKSIHKSARSLRRLASLLSTFAVVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0208344_10209513300026716SoilMRRHTADSRASTKSIHKPARSLRRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0208211_10503613300026734SoilMRRHIAGSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQQ
Ga0207471_10324913300026779SoilMRRHIADSRASTKSIHESAWSLHRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0209998_1007117123300027717Arabidopsis Thaliana RhizosphereMRRHIADSRASTKSIHESAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR
Ga0209858_100523813300027948Groundwater SandMRRHTTGSRASTKSIHEPARSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR
Ga0307290_1008409323300028791SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSPFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0307305_1020952313300028807SoilMRRHTTGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSACRLRFQR
Ga0307292_1003158813300028811SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRELDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0307312_1000044163300028828SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0307277_1009970813300028881SoilMRRRTAGSRASTKSIHKPARSLRRFASLLSSFATVAGVQRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCR
Ga0308309_1005589923300028906SoilMRRHTADSRASTKSIHEPAWSLPRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR
Ga0138296_159186613300030923SoilMRRHIAGSRASTKSIHEPVWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSS
Ga0075373_1159618513300030945SoilMRRHIADSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSACRLRFQR
Ga0075376_1153274413300030968SoilMRRHIADSRASTKSIHEPAWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0170834_10411810133300031057Forest SoilMRRHIAGSRASTKSIHEPVWSLHRFASLLSTFAAVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR
Ga0306921_10003162103300031912SoilMRRRTAGSRASTKSIHEPARSRRRFASLLSTFSPLAGVTAKTSRSIKPRERDLRCLRLFNEANEPSSTCRLRFQQ
Ga0310810_1006125833300033412SoilMRRHTAGSRASTKSIHEPARSLRRFASLLSTFAVVAGVPRQTSRSIKPRERDLRCLRLFFGPVFNEANEPSSTCRLRFQR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.