NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F049465

Metagenome Family F049465

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F049465
Family Type Metagenome
Number of Sequences 146
Average Sequence Length 108 residues
Representative Sequence MSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIAAGPVKIQARARRRRIG
Number of Associated Samples 131
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.93 %
% of genes near scaffold ends (potentially truncated) 30.14 %
% of genes from short scaffolds (< 2000 bps) 76.71 %
Associated GOLD sequencing projects 126
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.205 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.123 % of family members)
Environment Ontology (ENVO) Unclassified
(39.726 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(36.301 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.75%    β-sheet: 8.51%    Coil/Unstructured: 56.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF00072Response_reg 43.15
PF01425Amidase 15.75
PF01734Patatin 10.27
PF00912Transgly 4.79
PF00691OmpA 2.05
PF02627CMD 0.68
PF13561adh_short_C2 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 15.75
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 10.27
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 10.27
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 10.27
COG0744Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidaseCell wall/membrane/envelope biogenesis [M] 4.79
COG4953Membrane carboxypeptidase/penicillin-binding protein PbpCCell wall/membrane/envelope biogenesis [M] 4.79
COG5009Membrane carboxypeptidase/penicillin-binding proteinCell wall/membrane/envelope biogenesis [M] 4.79
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.68
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.68


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.21 %
UnclassifiedrootN/A4.79 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002886|JGI25612J43240_1005231All Organisms → cellular organisms → Bacteria1789Open in IMG/M
3300003994|Ga0055435_10040124Not Available1094Open in IMG/M
3300004009|Ga0055437_10146115All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium730Open in IMG/M
3300004022|Ga0055432_10005176All Organisms → cellular organisms → Bacteria2202Open in IMG/M
3300004052|Ga0055490_10177549All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300004058|Ga0055498_10108297All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium570Open in IMG/M
3300004156|Ga0062589_100043505All Organisms → cellular organisms → Bacteria2441Open in IMG/M
3300004156|Ga0062589_102327416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium551Open in IMG/M
3300004463|Ga0063356_100384898All Organisms → cellular organisms → Bacteria1794Open in IMG/M
3300004463|Ga0063356_102991811All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300005294|Ga0065705_10425243All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium853Open in IMG/M
3300005440|Ga0070705_100237670All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300005444|Ga0070694_100378196All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300005457|Ga0070662_100321906All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300005578|Ga0068854_101247481All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300005843|Ga0068860_101354703All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium733Open in IMG/M
3300006847|Ga0075431_100316178All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300006918|Ga0079216_11380507All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium581Open in IMG/M
3300009038|Ga0099829_10003219All Organisms → cellular organisms → Bacteria → Proteobacteria9556Open in IMG/M
3300009053|Ga0105095_10397884All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium760Open in IMG/M
3300009087|Ga0105107_10345357All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1037Open in IMG/M
3300009090|Ga0099827_10859338All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300009147|Ga0114129_10051166All Organisms → cellular organisms → Bacteria5801Open in IMG/M
3300009166|Ga0105100_10808076All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300009171|Ga0105101_10319823All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300010399|Ga0134127_10009141All Organisms → cellular organisms → Bacteria7317Open in IMG/M
3300010400|Ga0134122_10029148All Organisms → cellular organisms → Bacteria4169Open in IMG/M
3300010400|Ga0134122_10367636All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300011410|Ga0137440_1106422All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium571Open in IMG/M
3300011419|Ga0137446_1029579Not Available1159Open in IMG/M
3300011429|Ga0137455_1032538All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300011438|Ga0137451_1016274All Organisms → cellular organisms → Bacteria2145Open in IMG/M
3300011442|Ga0137437_1293616All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium556Open in IMG/M
3300012034|Ga0137453_1115402All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300012035|Ga0137445_1089262All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium623Open in IMG/M
3300012040|Ga0137461_1046346All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300012159|Ga0137344_1086571All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012171|Ga0137342_1143295All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012174|Ga0137338_1000567All Organisms → cellular organisms → Bacteria5978Open in IMG/M
3300012203|Ga0137399_10738494All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium829Open in IMG/M
3300012225|Ga0137434_1001104All Organisms → cellular organisms → Bacteria2049Open in IMG/M
3300012226|Ga0137447_1026497All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium932Open in IMG/M
3300012355|Ga0137369_10140981All Organisms → cellular organisms → Bacteria1925Open in IMG/M
3300012582|Ga0137358_10494327All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300012685|Ga0137397_10026431All Organisms → cellular organisms → Bacteria4112Open in IMG/M
3300012685|Ga0137397_10072654All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2492Open in IMG/M
3300012925|Ga0137419_10044999All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2813Open in IMG/M
3300012929|Ga0137404_10252216All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300012930|Ga0137407_10283547All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1510Open in IMG/M
3300014308|Ga0075354_1017361All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300014318|Ga0075351_1112193All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium603Open in IMG/M
3300014870|Ga0180080_1079450All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium571Open in IMG/M
3300014881|Ga0180094_1099519All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium668Open in IMG/M
3300014882|Ga0180069_1115428All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium649Open in IMG/M
3300014884|Ga0180104_1113639Not Available779Open in IMG/M
3300014885|Ga0180063_1005676All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3330Open in IMG/M
3300014885|Ga0180063_1072034All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1022Open in IMG/M
3300015254|Ga0180089_1022783Not Available1154Open in IMG/M
3300015264|Ga0137403_10003665All Organisms → cellular organisms → Bacteria18392Open in IMG/M
3300017997|Ga0184610_1049426All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300018000|Ga0184604_10030369Not Available1368Open in IMG/M
3300018027|Ga0184605_10142630All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300018028|Ga0184608_10061655All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300018028|Ga0184608_10086413All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300018031|Ga0184634_10085937All Organisms → cellular organisms → Bacteria1357Open in IMG/M
3300018051|Ga0184620_10324949All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300018053|Ga0184626_10042070All Organisms → cellular organisms → Bacteria1900Open in IMG/M
3300018054|Ga0184621_10010730All Organisms → cellular organisms → Bacteria2642Open in IMG/M
3300018056|Ga0184623_10518433All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium506Open in IMG/M
3300018061|Ga0184619_10299398All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium737Open in IMG/M
3300018063|Ga0184637_10069235All Organisms → cellular organisms → Bacteria2161Open in IMG/M
3300018066|Ga0184617_1103973All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300018071|Ga0184618_10084700All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1219Open in IMG/M
3300018074|Ga0184640_10130741All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300018075|Ga0184632_10137631All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300018079|Ga0184627_10089883All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300018082|Ga0184639_10202826All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1052Open in IMG/M
3300018084|Ga0184629_10106263All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300018422|Ga0190265_10024406All Organisms → cellular organisms → Bacteria4896Open in IMG/M
3300018422|Ga0190265_10266693All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1767Open in IMG/M
3300018422|Ga0190265_11137868All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium900Open in IMG/M
3300018429|Ga0190272_10094938All Organisms → cellular organisms → Bacteria1896Open in IMG/M
3300018429|Ga0190272_11754011All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium645Open in IMG/M
3300019360|Ga0187894_10520682All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300019377|Ga0190264_10263331All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1011Open in IMG/M
3300019458|Ga0187892_10033282All Organisms → cellular organisms → Bacteria4085Open in IMG/M
3300019878|Ga0193715_1031388All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1153Open in IMG/M
3300019879|Ga0193723_1009002All Organisms → cellular organisms → Bacteria3238Open in IMG/M
3300019883|Ga0193725_1013224All Organisms → cellular organisms → Bacteria2316Open in IMG/M
3300019886|Ga0193727_1100505All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium853Open in IMG/M
3300020006|Ga0193735_1059608All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1120Open in IMG/M
3300020018|Ga0193721_1104682All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300020022|Ga0193733_1042532All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300020060|Ga0193717_1035887All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1880Open in IMG/M
3300020170|Ga0179594_10057324Not Available1329Open in IMG/M
3300021051|Ga0206224_1045649All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300021090|Ga0210377_10046171All Organisms → cellular organisms → Bacteria3035Open in IMG/M
3300025324|Ga0209640_10074079All Organisms → cellular organisms → Bacteria2943Open in IMG/M
3300025549|Ga0210094_1123491All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium500Open in IMG/M
3300025885|Ga0207653_10333186All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium591Open in IMG/M
3300025912|Ga0207707_10730141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium830Open in IMG/M
3300025917|Ga0207660_10810968All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300025922|Ga0207646_11346115All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium622Open in IMG/M
3300025923|Ga0207681_10135419All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1827Open in IMG/M
3300025965|Ga0210090_1002763All Organisms → cellular organisms → Bacteria2288Open in IMG/M
3300026047|Ga0208658_1018761All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium566Open in IMG/M
3300026054|Ga0208659_1014046All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium606Open in IMG/M
3300026118|Ga0207675_100180606All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2020Open in IMG/M
3300026285|Ga0209438_1001371All Organisms → cellular organisms → Bacteria → Proteobacteria7990Open in IMG/M
3300026285|Ga0209438_1034942All Organisms → cellular organisms → Bacteria1667Open in IMG/M
3300026360|Ga0257173_1052696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium579Open in IMG/M
3300026446|Ga0257178_1032074All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium656Open in IMG/M
3300027650|Ga0256866_1100216All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300027815|Ga0209726_10159611All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300027821|Ga0209811_10402848All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium530Open in IMG/M
3300028536|Ga0137415_10104130All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2689Open in IMG/M
3300028589|Ga0247818_10456877All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300028597|Ga0247820_11375739All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium514Open in IMG/M
3300028715|Ga0307313_10107023All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium851Open in IMG/M
3300028792|Ga0307504_10027835All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1470Open in IMG/M
3300028796|Ga0307287_10013391All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2781Open in IMG/M
3300028803|Ga0307281_10157113All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium800Open in IMG/M
3300028809|Ga0247824_10092641All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1585Open in IMG/M
3300028812|Ga0247825_10139635All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300028819|Ga0307296_10470995All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium687Open in IMG/M
3300028878|Ga0307278_10288547All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300028885|Ga0307304_10271624All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium743Open in IMG/M
3300030006|Ga0299907_10033654All Organisms → cellular organisms → Bacteria3992Open in IMG/M
3300030620|Ga0302046_10132006All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2046Open in IMG/M
3300030620|Ga0302046_10866157Not Available724Open in IMG/M
(restricted) 3300031150|Ga0255311_1012711All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1701Open in IMG/M
(restricted) 3300031150|Ga0255311_1014098All Organisms → cellular organisms → Bacteria1620Open in IMG/M
(restricted) 3300031197|Ga0255310_10000269All Organisms → cellular organisms → Bacteria11441Open in IMG/M
(restricted) 3300031197|Ga0255310_10005163All Organisms → cellular organisms → Bacteria3389Open in IMG/M
3300031228|Ga0299914_11160934All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium621Open in IMG/M
(restricted) 3300031248|Ga0255312_1021334All Organisms → cellular organisms → Bacteria1546Open in IMG/M
(restricted) 3300031248|Ga0255312_1037526All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300031720|Ga0307469_10021794All Organisms → cellular organisms → Bacteria3504Open in IMG/M
3300031740|Ga0307468_101228502All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium677Open in IMG/M
3300031740|Ga0307468_101714114All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300032174|Ga0307470_10060749All Organisms → cellular organisms → Bacteria1990Open in IMG/M
3300033233|Ga0334722_10021951All Organisms → cellular organisms → Bacteria5433Open in IMG/M
3300033417|Ga0214471_10039545All Organisms → cellular organisms → Bacteria3832Open in IMG/M
3300033551|Ga0247830_10249039All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300033811|Ga0364924_110471All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium629Open in IMG/M
3300033812|Ga0364926_033207All Organisms → cellular organisms → Bacteria966Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.12%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil13.70%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment13.01%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.90%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.79%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil4.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.42%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.74%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.74%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.05%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.37%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.37%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.37%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.37%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.37%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.37%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.68%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.68%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.68%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.68%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.68%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.68%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.68%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004022Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009171Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011410Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2EnvironmentalOpen in IMG/M
3300011419Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012034Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2EnvironmentalOpen in IMG/M
3300012035Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2EnvironmentalOpen in IMG/M
3300012040Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2EnvironmentalOpen in IMG/M
3300012159Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2EnvironmentalOpen in IMG/M
3300012171Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2EnvironmentalOpen in IMG/M
3300012174Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012226Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014308Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1EnvironmentalOpen in IMG/M
3300014318Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rdEnvironmentalOpen in IMG/M
3300014870Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10DEnvironmentalOpen in IMG/M
3300014881Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1DaEnvironmentalOpen in IMG/M
3300014882Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10DEnvironmentalOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021051Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos A1EnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025549Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025965Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026047Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd (SPAdes)EnvironmentalOpen in IMG/M
3300026054Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026446Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-BEnvironmentalOpen in IMG/M
3300027650Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeqEnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300033811Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17EnvironmentalOpen in IMG/M
3300033812Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25612J43240_100523123300002886Grasslands SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERTEKVSVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAPDQIPSRVRRRQAS*
Ga0055435_1004012413300003994Natural And Restored WetlandsMELECSTVFDSARFRHCPTCGSIEFYPLESWLNRERSEKAAAALPSLSADRAVRAASLPRPLWLERLRAKRAAGDARIAAGPSKIPGGGRRRRVG*
Ga0055437_1014611513300004009Natural And Restored WetlandsMELECSTVFDSARFRHCPTCGSIEFYPLESWLNRERSEKAAAALPSLSADRAVRAASLPRPLWLERLRAKRAAGD
Ga0055432_1000517643300004022Natural And Restored WetlandsECSTVFDSARFRHCPTCGSIEFYPLESWLNRERSEKAAAALPSLSADRAVRAASLPRPLWLERLRAKRAAGDARIAAGPSKIPGGGRRRRVG*
Ga0055490_1017754923300004052Natural And Restored WetlandsMISQRELPRIDLRFAKLCMELDCNTVFDSAVFRHCPTCGSVEFYPLEAWLNRERSEKAVVALGDLGVDRAIRVATMPRPLWLERLRAKRAESDARIAAGPAKIQIRARRRRAG*
Ga0055498_1010829723300004058Natural And Restored WetlandsMSPEQDDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSIEFYPLESWLNRERSEKVTAGLPNLPNLSADRADRDAALPRPLWLERLRAKRAASDARMAPGPLNIPGGGRRRRVG*
Ga0062589_10004350533300004156SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAAPDTIATRVRRRRAS*
Ga0062589_10232741613300004156SoilDLPRIELRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERAQKAAVVYDADRAVNVTSMPRALWLEKLREKRAASDARIAVTPVKAQPRARRRRVS*
Ga0063356_10038489823300004463Arabidopsis Thaliana RhizosphereMSSQRDLPRIELRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERAQKAAVVYDADRAVNVTSMPRALWLEKLREKRAASDARIAVTPVKAQPRARRRRVS*
Ga0063356_10299181123300004463Arabidopsis Thaliana RhizosphereMSFERDLPRIDLRFAKLCMELDCNTVFDAAMFRNCPTCGSIEFYPLESWLNRERSEKAPVAIGSVNVDRAVRAAAMPRPLWLERLRAKRAESDARLAAGPAKIQARVRRRRAS*
Ga0065705_1042524323300005294Switchgrass RhizosphereMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQIPVALGADRSSAHVTAMPRPLWLERLRAKRAESDAWLAAGPKIQARVRRRRAS*
Ga0070705_10023767023300005440Corn, Switchgrass And Miscanthus RhizosphereMNSQRDLPRIELRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERAQKAPVVYDADRAVTVTSMPRALWLERLREKRAASDARIAVTPVKAQPRARRRRVS*
Ga0070694_10037819613300005444Corn, Switchgrass And Miscanthus RhizosphereMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVALGADRSAHVTAMPRPLWLERLRAKRAESDAWLAAGPKIQARVRRRRAS*
Ga0070662_10032190613300005457Corn RhizosphereMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRPLWLQRLRAKRA
Ga0068854_10124748113300005578Corn RhizosphereRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAAPDTIATRVRRRRAS*
Ga0068860_10135470323300005843Switchgrass RhizosphereMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQIPVALGADRSSAHVTAMPRPLWLERLRAKRAES
Ga0075431_10031617823300006847Populus RhizosphereMNSQRDLPRIDLRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERSEKAPVTLGSLGVDRAVHVTSMPRPLWLERLREKRAASDARMSAGPAQIQIRARRRRVG*
Ga0079216_1138050713300006918Agricultural SoilMSSQRDLPRMDLRYAKLCMELDCNTVFDSAMFRHCPTCGSIEFYPLESWLNRERADKAPVVIGNVNVDRAMRVAAMPRPLWLERLRAKRAESDARLAAGP
Ga0099829_1000321983300009038Vadose Zone SoilMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVTIQARARRRRVG*
Ga0105095_1039788423300009053Freshwater SedimentMSSQRELPRIDLRFAKLCMELDCNTVFDSAVFRHCPTCGSVEFYPLEAWLNRERSEKAVVALGDLGVDRAIRVATMPRPLWLERLRAKRAESDARIAAGPAKIQVRARRRRAG*
Ga0105107_1034535723300009087Freshwater SedimentMSFERDLPRIDLRFAKLCMELDCNTVFDAAMFRNCPTCGSIEFYPLESWLNRERSEKAPVVIGNVNVDRAVRVAAMPRPLWLERLRAKRAESDARLAAGPAKIQARVRRRRAS*
Ga0099827_1085933823300009090Vadose Zone SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQATVALGNPGADRSARVTAMARPLWLERLRAKRAESDARIAAGPKILVRVRRRRAS*
Ga0114129_1005116633300009147Populus RhizosphereMSFQRDLPRIDLRFSKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNPGADRSARVTAMARPLWLERLRAKRAESDARIEAGPKIQERVRRRRAS*
Ga0105100_1080807623300009166Freshwater SedimentELDCNTVFDSAVFRHCPTCGSIEFYPLEAWLNRERSEKAVVALGDLGVDRAIRVATMPRPLWLERLRAKRAESDARIAAGPAKIQVRARRRRAS*
Ga0105101_1031982323300009171Freshwater SedimentMSSQRELPRIDLRFAKLCMELDCNTVFDSAVFRHCPTCGSIEFYPLEAWLNRERSEKAVVALGDLGVDRAIRVATMPRPLWLERLRAKRAESDARLAAGPAKIQARVRRRRAS*
Ga0134127_10009141113300010399Terrestrial SoilMVARESPPREDRMSSQRDLPRIELRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERAQKAAVVYDADRAVNVTSMPRALWLEKLREKRAASDARIAVTPVKAQPRARRRRVS*
Ga0134122_1002914833300010400Terrestrial SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAAPDTMATRVRRRRAS*
Ga0134122_1036763633300010400Terrestrial SoilMSSQRDLPRIELRFAKLCMELDCNTVFDSALFRHCPTCGSIEFYPLESWLNRERAQKAAVVYDADRAVNVTSMPRALWLEKLREKRAASDARIAVTPVKAQPRARRRRVS*
Ga0137440_110642213300011410SoilMSFERDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGTLSADRAVRVTSMPRPLWLERLREKRAASDARIATGPVKIQARARRRRVG*
Ga0137446_102957913300011419SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLSTDRAVRVTSMPRALWLERLREKRATSDARIAEGPVKIQAAPGAGESAD
Ga0137455_103253813300011429SoilMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPVVIGNVAVDRAVRVATMPRPLWLERLRGKRAESDARLAAGPAKIQARVRRRRAS*
Ga0137451_101627423300011438SoilMTFQPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRADRAVRVTSMPRALWLERLREKRAASDARIATGPVTIQARARRRRVG*
Ga0137437_129361613300011442SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRNCPTCGSIEFYPLESWLNRERSEKAPVVIGNVNVDRAVRVAAMPRPLWLERLRAKRAESD
Ga0137453_111540223300012034SoilMPFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRARWLERLREKRAASDARIATGPVKIQARARRRRVG*
Ga0137445_108926213300012035SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLSADRAVRVTSMPRPLWLERLREKRAASDA
Ga0137461_104634633300012040SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLSADRAVRATSMPRPLWLERLREKRAASDARIAEGPVKIQARARRRRIG*
Ga0137344_108657123300012159SoilMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNREHSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQARARRRRVG*
Ga0137342_114329523300012171SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSERAPAVLGNLGADRVVRVTSMPRALWLERLREKRAASDARIAEGPVKIQARARRRRIG*
Ga0137338_100056773300012174SoilMSSQRDLPRIDLRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKPAASDARIAAGPVKIAARARRRRVG*
Ga0137399_1073849413300012203Vadose Zone SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVTLGNPGADRLARVTTMARPLWLERLRAKR
Ga0137434_100110433300012225SoilMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQAHARRRRVG*
Ga0137447_102649713300012226SoilMSFERDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLSADRAVRVTSMPRALWLERLREKRAASDARIAEGPVKIQARARRRRIG*
Ga0137369_1014098123300012355Vadose Zone SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVALGKPGVDRSAHVTAMPRPLWLERLRAKRAESDARLAAGPKIQARVRRRRAS*
Ga0137358_1049432713300012582Vadose Zone SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEQTPVTLGNPGADRLARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS*
Ga0137397_1002643133300012685Vadose Zone SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERTEKVSVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAPDKIPSRVRRRQAS*
Ga0137397_1007265433300012685Vadose Zone SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVTLGNPGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS*
Ga0137419_1004499923300012925Vadose Zone SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVTLGNAGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS*
Ga0137404_1025221633300012929Vadose Zone SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVALGADRSAHVTAMPRPLWLERLRAKRAESDAWLAAGPKIQARARRRRAS*
Ga0137407_1028354723300012930Vadose Zone SoilMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVALGADRSAHVTAMPRPLWLERLRAKRAESDAWLAAGPKIQARARRRRAS*
Ga0075354_101736113300014308Natural And Restored WetlandsEQDDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSIEFYPLESWLNRERSEKVTAGLPNLPNLSADRADRDAALPRPLWLERLRAKRAASDARMAPGPLNIPGGGRRRRVG*
Ga0075351_111219313300014318Natural And Restored WetlandsMDLRFAKLCIELDCSTVFDSAIFRHCPTCGSVECYPVESWLNRERSETAPVVIGNGNMDRAARVADMPRPVWLERLRAKRVEGDASPAAGPAK
Ga0180080_107945013300014870SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLSADRAVRVTSMPRPLWLERLREKRAASDARIATGPVKIQARARRRRIG*
Ga0180094_109951913300014881SoilMSSQRDLPRIDLRFAKLCMELDCNTVFDSALFRHCPTCASVEFYPLESWLNRERSEKAPVVLGNLGVDHAVRVTPTPRARWLERLREKRTASDARIA
Ga0180069_111542813300014882SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERSEKAPVALGNLGVDRAVRVTSMPRALWLERLREKRAASDARIAEGPVKIQARARRRRIG*
Ga0180104_111363913300014884SoilMPFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPVVLGNLGVDHAVRVTPTPRARWLERLREKRTASDARIAAGPVKIAARARRRRVG*
Ga0180063_100567633300014885SoilMSSQRDLPRIDLRFAKLCMELDCNTVFDSALFRHCPTCASVEFYPLESWLNRERSEKAPVVLGNLGVDHAVRVTPTPRARWLERLREKRTASDARIAAGPVKIAARARRRRVG*
Ga0180063_107203413300014885SoilMSFERDLPRIDLRFAKLCMELDCNTVFDSARFRHCRTCGSVEFYPLESWLNRERSEKAPVVIGDLNVDRAVRVAAMPRPLWLERLRAKRAESDARLAASPPRIPARVRRRRAS
Ga0180089_102278313300015254SoilMSSQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLSADRAVRVTSMPRPLWLERLREKRAASDARIATGPVKIQARARRRRVG*
Ga0137403_1000366513300015264Vadose Zone SoilMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVTLGNPGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS*
Ga0184610_104942633300017997Groundwater SedimentMTFQRGLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQARARRRRVG
Ga0184604_1003036923300018000Groundwater SedimentMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNPGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS
Ga0184605_1014263023300018027Groundwater SedimentMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNLGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS
Ga0184608_1006165513300018028Groundwater SedimentMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQALARRRRVG
Ga0184608_1008641323300018028Groundwater SedimentMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSQQTPVALGADRSAHVTAMPRPLWLERLRAKRAESDAWLAGGPKIQARVRRRRAS
Ga0184634_1008593723300018031Groundwater SedimentMPFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIAEGPVKIQARARRRRVG
Ga0184620_1032494913300018051Groundwater SedimentTGGWDPMTPEKDTFRIELRNAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNLGADRSARVTTMARPLWLERLRAKRAASGARIAAGPKIQARVRRRRAS
Ga0184626_1004207023300018053Groundwater SedimentMTFQRDLPRIDLRFAKLCIELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQARARRRRVG
Ga0184621_1001073023300018054Groundwater SedimentMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQARARRRRVG
Ga0184623_1051843313300018056Groundwater SedimentMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIA
Ga0184619_1029939823300018061Groundwater SedimentMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGKPGADRSARVTVMARPLWLERLRTKRAESDARIAAR
Ga0184637_1006923523300018063Groundwater SedimentMSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVHVTSMPRARWLERLREKRAASDARIAAGPVKIQALARRRRVG
Ga0184617_110397323300018066Groundwater SedimentRMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNPGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS
Ga0184618_1008470013300018071Groundwater SedimentMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNLGADRSARVTTMARPLWLERLRAKRAAS
Ga0184640_1013074123300018074Groundwater SedimentMSSQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLSADRAVRVASMPRPLWLERLREKRAASDARIAEGPVKIQARARRRRVG
Ga0184632_1013763123300018075Groundwater SedimentMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQARARRRRVG
Ga0184627_1008988323300018079Groundwater SedimentMSSQRDLPRIDLRFAKLCIELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPVALGNLSPDRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQARARRRRVG
Ga0184639_1020282623300018082Groundwater SedimentMSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRECSEKAPAALGNLGADRAVHVTSMPRARWLERLREKRAASDARIAAGPVKIQALARRRRVG
Ga0184629_1010626313300018084Groundwater SedimentMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIAAGPVKIQARARRRRIG
Ga0190265_1002440633300018422SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEKAPVALGNPGVRVTALPRPLWLERLRAKRAESDARLAAGPKVQTRVRRRRAS
Ga0190265_1026669333300018422SoilMNSQRDLSRIDLRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERAEKAPVALGNLGVDRAVRVTSLPRPLWLERLREKRAASDARLAAGPVKIQARVRRRRVS
Ga0190265_1113786823300018422SoilMRFQRDLPRIDLRFAKLCMELDCNTVFDSAKFRHCPNCGSIEFYPLESWLNRERSEKGSVVLGNVDRAVRVTAMPRPVWLERLRAKRAESDARIAAGPAKIQARVRRRRAS
Ga0190272_1009493833300018429SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVALGNVDHAVRVTSMPRPVWLERLRAKRAESDARLAAGPAKIQARIRRRRAS
Ga0190272_1175401123300018429SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPVALGNLGADRAVRVTSMPRGLWLERLRGKRAASDARIATGPVKIQARARRRRVG
Ga0187894_1052068213300019360Microbial Mat On RocksNSQRDLPRIDLRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERSTKAPVALGNVVDRAVHVTSMPRPLWLERLREKRAASDARIAVGPARIRARRQRVG
Ga0190264_1026333113300019377SoilMPFQRDLPRIDLRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERSEKAPVALGNPGVRVTALPRPLWLERLRAKRAESDARLAAGPKVQTR
Ga0187892_1003328233300019458Bio-OozeMNSQRDLPRMDLRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERPEKAPVALGNVVDRAVHVTSMPRPLWLERLREKRAASDARLTAGPVKIQAHARRRRVG
Ga0193715_103138813300019878SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERPEQAPVALGNPGADRLARVTTMARPLWLERLRAKRAE
Ga0193723_100900223300019879SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERTEKVSVTLGASGVDRAVRVNAMPRPLWLQRLRSNRAESDARLAAVPDQMPARVRRRRAS
Ga0193725_101322443300019883SoilMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVTIQARARRRRVG
Ga0193727_110050523300019886SoilMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVALGADRSAHVTAMPRPLWLERLRAKRAESDAWLAAGPKIQARVRRRRAS
Ga0193735_105960813300020006SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNLGADRSARVTTMARPLWLERLRAKRAASDARIAA
Ga0193721_110468213300020018SoilFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNLGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS
Ga0193733_104253233300020022SoilPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNLGADRSARVTTMARPLWLERLRAKRAASDARIATGPKIQARVRRRRAS
Ga0193717_103588743300020060SoilMSFERDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKASVALGNVDHAVRVTSMPRPVWLERLRAKRAESDARLATGPAKIQARIRRRRAS
Ga0179594_1005732413300020170Vadose Zone SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVTLGNPGADRLARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS
Ga0206224_104564913300021051Deep Subsurface SedimentDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIAEGPVKIQARARRRRIG
Ga0210377_1004617143300021090Groundwater SedimentMSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLSTDRAVRVTSMPRALWLGRLREKRATSDARIAEAPVKIQARARRRRVG
Ga0209640_1007407943300025324SoilMSSQRDLPRIDLRFAKLCMELDCNTVFDSALFRHCPTCASVEFYPLESWLNRERSEKAPVVLGDLGVDHAVHVTSTPRARWLERLREKRTASDARIAAGPVSIQARARRRRVG
Ga0210094_112349113300025549Natural And Restored WetlandsMELECSTVFDSARFRHCPTCGSIEFYPLESWLNRERSEKAAAALPSLSADRAVRAASLPRPLWLERLRAKRAAGDARIAAGPSKIPGGGRRRRVG
Ga0207653_1033318613300025885Corn, Switchgrass And Miscanthus RhizosphereMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAAPDTIATRVRRRRAS
Ga0207707_1073014123300025912Corn RhizosphereMSSQRDLPRIELRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERAQKAAVVYDADRAVNVTSMPRALWLEKLREKRAASDARIAVTPVKAQPRARRRRVS
Ga0207660_1081096823300025917Corn RhizosphereMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAAPDTIATRVRRRRAS
Ga0207646_1134611513300025922Corn, Switchgrass And Miscanthus RhizosphereMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQIPVALGADRSSAHVTAMPRPLWLERLRAKRAESDAWL
Ga0207681_1013541913300025923Switchgrass RhizosphereLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAAPDTIATRVRRRRAS
Ga0210090_100276343300025965Natural And Restored WetlandsMSPEQDDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSIEFYPLESWLNRERSEKVTAGLPNLPNLSADRADRDAALPRPLWLERLRAKRAASDARMAPGPLNIPGGGRRRRVG
Ga0208658_101876113300026047Natural And Restored WetlandsMSLQRELPRMDLRFAKLCIELDCSTVFDSAIFRHCPTCGSVECYPVESWLNRERSETAPVVIGNGNMDRAARVADMPRPVWLERLRAKRVEGDA
Ga0208659_101404623300026054Natural And Restored WetlandsEQDDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSIEFYPLESWLNRERSEKVTAGLPNLPNLSADRADRDAALPRPLWLERLRAKRAASDARMAPGPLNIPGGGRRRRVG
Ga0207675_10018060623300026118Switchgrass RhizosphereMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAQKAAVVYDADRAVNVTSMPRALWLEKLREKRAASDARIAVTPVKAQPRARRRRVS
Ga0209438_100137153300026285Grasslands SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERTEKVSVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAPDQIPSRVRRRQAS
Ga0209438_103494233300026285Grasslands SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEPAPVALGNPGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS
Ga0257173_105269613300026360SoilRMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVTIQARARRRRVG
Ga0257178_103207413300026446SoilMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATG
Ga0256866_110021613300027650SoilMELDCNTVFDSALFRQCPTCASVEYYPLESWLNRERSLDAPVALGGLGPDRAVHVTSMPRPVWLARLRAKRAESDARIAARPVKIQDRARRRRVG
Ga0209726_1015961133300027815GroundwaterQRDLPRIDLRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPIESWLDRERSEKAPVALGDLGVDRAVRVTSMPRPLWLERLREKRTVSDARIAAGPVKIQASARRRRVG
Ga0209811_1040284813300027821Surface SoilMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVALGADRSAHVTAMPRPLWLERLRAKRAESDAWLAGGPKIQARVRRRRAS
Ga0137415_1010413033300028536Vadose Zone SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVTLGNAGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS
Ga0247818_1045687713300028589SoilMNFQRDLPRIDLRLAKLCIELDCSTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRPLWLQRLRAKRAESDARLAAAPDTIATRVRRRRAS
Ga0247820_1137573913300028597SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSVKASVADRAVGVTAMPRPLWLQRLRAKSDARLAATPDKIEARARGWRAS
Ga0307313_1010702313300028715SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNPGADRSARVTTMARPLWLERLRAKR
Ga0307504_1002783523300028792SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDAAMFRHCPTCGSVEFYPLESWLNRERTEKVPVTLGASGVDRAVRVNAMPRPLWLQRLRSNRAESDARLAAVPDTMPARVRRRRAS
Ga0307287_1001339113300028796SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNPGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRA
Ga0307281_1015711323300028803SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIAAGPVKIQARARRRRIG
Ga0247824_1009264133300028809SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERAEKASVTLGASVVDRAVRVNAMPRLAAAPDTIATRVRRRRAS
Ga0247825_1013963523300028812SoilMNFQRDLPRIDLRLAKLCIELDCSTVFDSAMFRHCPTCGSDEFYPLESWLNRERSVKASVADRAVGVTAMPRPLWLQRLRAKSDARLAATPDKIEARARGWRAS
Ga0307296_1047099523300028819SoilMSFLRELPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTTGALGADRSAHVTAMPRPLWLERLRAKRAESDAWLAGGPKIQARVRRRRAS
Ga0307278_1028854723300028878SoilPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQTPVALGADRSAHVTTMPRPLWLERLRAKRAESDAWLAAGPKIQARVRRRRAS
Ga0307304_1027162413300028885SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVALGNPGADRSARVTTMARPLWLERLRAKRAASDARIATGPKIQARVRRRRAS
Ga0299907_1003365463300030006SoilMSFPRDLARIDLRFAKLCMELDCNTVFDSALFRQCPTCASVEYYPLESWLNRERSLDAPVALGGLGPDRAVHVTSMPRPVWLARLRAKRAESDARIAARPVKIQDRARRRRVG
Ga0302046_1013200623300030620SoilMSFPRDLARIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSMPRALWLERLREKRAASDARIATGPVKIQARARRRRVG
Ga0302046_1086615713300030620SoilRIDLRVAKLCMELDCNTVFDSALFRQCPTCASVEYYPLESWLNRERSLDAPVALGGLGPDRAVHVTSMPRPVWLARLRAKRAESDARIAARPVKIQDRARRRRVG
(restricted) Ga0255311_101271123300031150Sandy SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAVFRHCPTCGSVEFYPLEAWLNRERSEKADVALGDLSVDRAIRVATMPRPLWLERLRAKSDAHI
(restricted) Ga0255311_101409823300031150Sandy SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKASVTLGTSVVDCAVRVTPMPRPVWLQRLRAKRAESDARLAATPEKIQARVRRRRAS
(restricted) Ga0255310_10000269153300031197Sandy SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKASVTLGTSVVDCAVRVTPMPRPVWLQRLRAKRAESDARLAATPEKIQARVRRRRAS
(restricted) Ga0255310_1000516333300031197Sandy SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAVFRHCPTCGSVEFYPLEAWLNRERSEKADVALGDLSVDRAIRVATMPRPLWLERLRAKSDARIAAGPAKIQIRARRRRAG
Ga0299914_1116093413300031228SoilMSFPRDLARIDLRFAKLCMELDCNTVFDSALFRQCPTCASVEYYPLESWLNRERSLDAPVVLGGLGPDRAVHVTSMPRPVWLARLRAKRAESDARIA
(restricted) Ga0255312_102133423300031248Sandy SoilMSSQRELPRIDLRFAKLCMELDCNTVFDSAVFRHCPTCGSVEFYPLEAWLNRERSEKADVALGDLSVDRAIRVATMPRPLWLERLRAKRAESDARIAAGPAKIQIRARRRRAG
(restricted) Ga0255312_103752623300031248Sandy SoilMSFQRELPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNREWSVKASVADRAVGGSAMPRPLWLQRLRAKSDARLAATPDKIEARARGRRAS
Ga0307469_1002179433300031720Hardwood Forest SoilMNFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERTEKVSVTLGASGVDRAVRVNAMPRPLWLQRLRSNRAESDARLAAVPDQVPARVRRRRAS
Ga0307468_10122850213300031740Hardwood Forest SoilMNSQRDLPRIELRFAKLCMELDCNTVFDSALFRHCPTCGSVEFYPLESWLNRERAQKAPVVYDADRAVTVTSMPRALWLERLREKRAASDARIAVNPVKAQPRAR
Ga0307468_10171411413300031740Hardwood Forest SoilDSGANRYHGEDRMSFQRDLPRIDLRFAKLCMELDCNTVFDSARFRHCPTCGSVEFYPLESWLNRERSEQAPVAFGNPGADRSARVTTMARPLWLERLRAKRAASDARIAAGPKIQARVRRRRAS
Ga0307470_1006074933300032174Hardwood Forest SoilMSFQRDLPRIDLRFAKLCMELDCNTVFDSAIFRHCPTCGSVEFYPLESWLNRERSEKAPVVINNVSMDRAVRVTAMPRPLWLERLRAKRAESDARLAAGPAKIEARMRRRRAS
Ga0334722_1002195133300033233SedimentMSFEGDLPRIELRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKLSVSLGNVDHAVRITSLPRPVWLERLRAKRAESDARLAAGPGKVASRVRRRRAS
Ga0214471_1003954533300033417SoilMSSQRDLPRIDLRFAKLCMELDCNTVFDSALFRYCPTCASVEFYPLESWLNRERSEKAPVVLGDLGVDHAVHVTSTPRARWLERLREKRTASDARIAAGPVSIQARARRRRVG
Ga0247830_1024903933300033551SoilMNFQRDLPRIDLRLAKLCIELDCSTVFDSAMFRHCPTCGSAEFYPLESWLNRERSVKASVADRAVGVTAMPRPLWLQRLRAKSDARLAATPDKIEARARGWRAS
Ga0364924_110471_71_4033300033811SedimentMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRAVRVTSLPRALWLERLREKRAASDARIATGPVKIQARALVG
Ga0364926_033207_280_6123300033812SedimentMTFQRDLPRIDLRFAKLCMELDCNTVFDSAMFRHCPTCGSVEFYPLESWLNRERSEKAPAALGNLGADRVVRVTSMPRALWLERLREKRAASDARIATGPVKIQARALVG


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