Metagenome Family F049210

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049210
Family Type	Metagenome
Number of Sequences	147
Average Sequence Length	63 residues
Representative Sequence	MRKGGYLAAHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA
Number of Associated Samples	111
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.53 %
% of genes near scaffold ends (potentially truncated)	92.52 %
% of genes from short scaffolds (< 2000 bps)	94.56 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.959 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (7.483 % of family members)
Environment Ontology (ENVO)	Unclassified (58.503 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.707 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.35% β-sheet: 0.00% Coil/Unstructured: 57.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF02540	NAD_synthase	17.69
PF01433	Peptidase_M1	5.44
PF13620	CarboxypepD_reg	2.72
PF13485	Peptidase_MA_2	2.72
PF08241	Methyltransf_11	0.68
PF03544	TonB_C	0.68
PF08681	DUF1778	0.68
PF03553	Na_H_antiporter	0.68
PF07963	N_methyl	0.68
PF01475	FUR	0.68
PF00480	ROK	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	17.69
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	5.44
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.36
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.68
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.68
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.96 %
Unclassified	root	N/A	2.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.96 %
Unclassified	root	N/A	2.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.96 %
Unclassified	root	N/A	2.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	81.63 %
Unclassified	root	N/A	2.04 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.68 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.89 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	10.20 %
Unclassified	root	N/A	2.04 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.68 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.89 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	9.52 %
Unclassified	root	N/A	2.04 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.89 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	9.52 %
Unclassified	root	N/A	2.04 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.68 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.89 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	8.16 %
Unclassified	root	N/A	2.04 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	1.36 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.89 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	8.16 %
Unclassified	root	N/A	2.04 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.36 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_11221787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1021400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300003324\|soilH2_10298295	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1441	Open in IMG/M
3300004114\|Ga0062593_101112090	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300004114\|Ga0062593_102678752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300004480\|Ga0062592_100784444	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300004480\|Ga0062592_102175575	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300005289\|Ga0065704_10621821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	596	Open in IMG/M
3300005293\|Ga0065715_10710346	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300005293\|Ga0065715_10733762	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300005328\|Ga0070676_10616618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	784	Open in IMG/M
3300005334\|Ga0068869_100945853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005337\|Ga0070682_101405527	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300005345\|Ga0070692_10171150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1252	Open in IMG/M
3300005345\|Ga0070692_10928928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300005353\|Ga0070669_101425239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005364\|Ga0070673_101859886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005366\|Ga0070659_101655032	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005367\|Ga0070667_102025417	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005444\|Ga0070694_100346548	All Organisms → cellular organisms → Bacteria → Acidobacteria	1150	Open in IMG/M
3300005445\|Ga0070708_102267008	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005467\|Ga0070706_101953338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	532	Open in IMG/M
3300005544\|Ga0070686_101564570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005547\|Ga0070693_100399673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300005549\|Ga0070704_100948026	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300005549\|Ga0070704_101213188	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300005577\|Ga0068857_100005327	All Organisms → cellular organisms → Bacteria	10956	Open in IMG/M
3300005577\|Ga0068857_100139752	All Organisms → cellular organisms → Bacteria → Acidobacteria	2189	Open in IMG/M
3300005577\|Ga0068857_100473847	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300005577\|Ga0068857_102516457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005578\|Ga0068854_101275770	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300005617\|Ga0068859_100373834	All Organisms → cellular organisms → Bacteria → Acidobacteria	1521	Open in IMG/M
3300005617\|Ga0068859_100542613	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300005617\|Ga0068859_101642866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	710	Open in IMG/M
3300005617\|Ga0068859_103181555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005841\|Ga0068863_100044480	All Organisms → cellular organisms → Bacteria	4215	Open in IMG/M
3300005841\|Ga0068863_100576992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300006169\|Ga0082029_1136482	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300006169\|Ga0082029_1532015	All Organisms → cellular organisms → Bacteria → Acidobacteria	1355	Open in IMG/M
3300006169\|Ga0082029_1682717	All Organisms → cellular organisms → Bacteria → Acidobacteria	1673	Open in IMG/M
3300006169\|Ga0082029_1736940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300006806\|Ga0079220_12059137	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300006844\|Ga0075428_100461164	All Organisms → cellular organisms → Bacteria → Acidobacteria	1361	Open in IMG/M
3300006845\|Ga0075421_100585228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300006852\|Ga0075433_10282276	All Organisms → cellular organisms → Bacteria → Acidobacteria	1471	Open in IMG/M
3300006871\|Ga0075434_101543281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300006954\|Ga0079219_12127659	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300009011\|Ga0105251_10393624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300009038\|Ga0099829_10717922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	830	Open in IMG/M
3300009093\|Ga0105240_10120391	All Organisms → cellular organisms → Bacteria → Acidobacteria	3161	Open in IMG/M
3300009093\|Ga0105240_12457384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300009094\|Ga0111539_10661467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1216	Open in IMG/M
3300009098\|Ga0105245_11767874	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300009100\|Ga0075418_11050006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300009100\|Ga0075418_11973038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300009148\|Ga0105243_10409119	All Organisms → cellular organisms → Bacteria → Acidobacteria	1262	Open in IMG/M
3300009148\|Ga0105243_11092231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300009174\|Ga0105241_10152785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1890	Open in IMG/M
3300009174\|Ga0105241_10941285	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300009176\|Ga0105242_10860001	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	903	Open in IMG/M
3300009177\|Ga0105248_11076163	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300009177\|Ga0105248_11940729	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300009553\|Ga0105249_13594424	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009610\|Ga0105340_1441796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300010041\|Ga0126312_10958930	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300010045\|Ga0126311_10302145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1205	Open in IMG/M
3300010362\|Ga0126377_11203133	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300010371\|Ga0134125_11734758	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300010397\|Ga0134124_10204222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1795	Open in IMG/M
3300010397\|Ga0134124_10384738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1330	Open in IMG/M
3300010397\|Ga0134124_11073905	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300010399\|Ga0134127_10960643	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300010399\|Ga0134127_12972438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300010403\|Ga0134123_10766317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300011119\|Ga0105246_11589186	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300011119\|Ga0105246_12151664	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300011431\|Ga0137438_1238563	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300012189\|Ga0137388_11345150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	654	Open in IMG/M
3300012882\|Ga0157304_1107727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300012957\|Ga0164303_11463936	Not Available	514	Open in IMG/M
3300012960\|Ga0164301_10311685	All Organisms → cellular organisms → Bacteria → Acidobacteria	1064	Open in IMG/M
3300012986\|Ga0164304_11073055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300013105\|Ga0157369_12349876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300013297\|Ga0157378_12569886	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300013307\|Ga0157372_12889366	Not Available	550	Open in IMG/M
3300013308\|Ga0157375_11046246	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300013760\|Ga0120188_1027032	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300014263\|Ga0075324_1033505	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300014325\|Ga0163163_12253937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300014326\|Ga0157380_12728966	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300014326\|Ga0157380_13237738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300014487\|Ga0182000_10073971	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300014745\|Ga0157377_11320135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300015372\|Ga0132256_101369281	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300015374\|Ga0132255_102481764	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300015374\|Ga0132255_102871749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	736	Open in IMG/M
3300018469\|Ga0190270_11561530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300018476\|Ga0190274_13052476	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300021290\|Ga0213902_106323	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300025735\|Ga0207713_1050507	All Organisms → cellular organisms → Bacteria → Acidobacteria	1659	Open in IMG/M
3300025908\|Ga0207643_10283722	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300025910\|Ga0207684_10066249	All Organisms → cellular organisms → Bacteria → Acidobacteria	3067	Open in IMG/M
3300025911\|Ga0207654_10218284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300025913\|Ga0207695_11293416	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300025921\|Ga0207652_10810350	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300025921\|Ga0207652_11272436	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300025925\|Ga0207650_11691236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300025925\|Ga0207650_11856505	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300025927\|Ga0207687_11792513	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300025932\|Ga0207690_11633636	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300025935\|Ga0207709_11374248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	584	Open in IMG/M
3300025936\|Ga0207670_10721825	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300025936\|Ga0207670_11137041	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300025942\|Ga0207689_10219974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300025942\|Ga0207689_10673257	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300025942\|Ga0207689_11009776	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300025942\|Ga0207689_11250051	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300025945\|Ga0207679_10098854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2277	Open in IMG/M
3300025960\|Ga0207651_10744831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	866	Open in IMG/M
3300025961\|Ga0207712_10539868	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300025981\|Ga0207640_12099908	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300025986\|Ga0207658_11201733	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300026041\|Ga0207639_11744721	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300026046\|Ga0208780_1002873	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300026075\|Ga0207708_10122750	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300026088\|Ga0207641_12087964	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300026095\|Ga0207676_11793051	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300026095\|Ga0207676_12556284	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300026116\|Ga0207674_12224880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300026142\|Ga0207698_11030299	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300027266\|Ga0209215_1014676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300027637\|Ga0209818_1159736	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300028379\|Ga0268266_10943591	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300028379\|Ga0268266_12191200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300028380\|Ga0268265_10483374	All Organisms → cellular organisms → Bacteria → Acidobacteria	1164	Open in IMG/M
3300028380\|Ga0268265_10923978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	858	Open in IMG/M
3300031538\|Ga0310888_10736983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300031548\|Ga0307408_100551521	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300031716\|Ga0310813_10234926	All Organisms → cellular organisms → Bacteria → Acidobacteria	1519	Open in IMG/M
3300031731\|Ga0307405_11933134	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300032017\|Ga0310899_10434170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300032126\|Ga0307415_102105712	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300032179\|Ga0310889_10514090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	609	Open in IMG/M
3300033412\|Ga0310810_10849664	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300033412\|Ga0310810_10891294	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300034149\|Ga0364929_0344014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.46%
Environmental	Environmental	43.54%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.46%
Terrestrial	Environmental → Terrestrial	42.18%
Aquatic	Environmental → Aquatic	1.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.09%
Sediment	Environmental → Aquatic → Sediment	1.36%
Floodplain	Environmental → Terrestrial → Floodplain	0.68%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.69%
Loam	Environmental → Terrestrial → Soil → Loam	12.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.36%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.08%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	2.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.04%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.04%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.04%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.36%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.36%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.68%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021290	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_2	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026046	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_112217872	3300000363	Soil	GRTLAGRLTLIELIRRMRRGGYLEAHKISDTDQFEIFEKIVDEVAGSGNVKLYFIVDRREFLDKVKSVYAAYA*
KanNP_Total_noBrdU_T14TCDRAFT_10214002	3300000596	Soil	RLRRGGYLVAHGITATDQFEILERLLDEVAGSGQLKVYFIVDRREFLEQVKTVYASYAS*
soilH2_102982951	3300003324	Sugarcane Root And Bulk Soil	EGRVTLMELIRRMRKGGYLSTHNIEATDQFEIFEKLLDEVAGPGQLKLYSLVDRREFIDKVKSVYAAYA*
Ga0062593_1011120901	3300004114	Soil	GGRTLEGRLTLLELLRRMRKGGYLSAHGIEAADQFEMFEKLIDEVAGSGTLKLYYVVDRREFTDKVKSVYAAYA*
Ga0062593_1026787521	3300004114	Soil	YLTAHGIIATDQFEILEKLLDEVAGSGQLKVYYIVDRREFLEKVKTVYASYAT*
Ga0062592_1007844441	3300004480	Soil	TLEGRLTLAELLRRMRRGGYLSAHGIEAVDQFELFEKLIDEVAGSGALKLYYIVDRREFIDKVKSVYAAYA*
Ga0062592_1021755751	3300004480	Soil	RLTLMDLIRRMRKGGYLTAHGIEATDQFEVFEKLLDEVAGLGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0065704_106218212	3300005289	Switchgrass Rhizosphere	RGGYLNSHGISTTDQFEILDKVVDEVAGTGAVKMYFVLDRREFLEKVKTVYASYA*
Ga0065715_107103461	3300005293	Miscanthus Rhizosphere	RMRRGGYLAAHNISETDQFEIFEKLLEEVAGAGALKLYYLVDRREFLDKVKSVYASYA*
Ga0065715_107337622	3300005293	Miscanthus Rhizosphere	GGYLAAHNISSNDQFEILEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0070676_106166182	3300005328	Miscanthus Rhizosphere	GYLNSHGISTTDQFEILDRLVDEVAGSGNLKLYYVVDRREFLEKVKAVYASYA*
Ga0068869_1009458531	3300005334	Miscanthus Rhizosphere	RSHEHGGRTLAGRLTLMELIRRLRRGGYLEAHQISDTDQFEIFEKIVDEVAGSGNLKLYYIVDRREFLDKVKSVYAAYA*
Ga0070682_1014055271	3300005337	Corn Rhizosphere	LEGRLTLMDLIRRMRKGGYLAVHNIEATDQFEIFEKLIDEVAGSGQLKVYYIVDRREFLDKVKSVYASYA*
Ga0070692_101711502	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RIRRGGYLNSHGISTTDQFEILDRLVDEVAGSGNLKLYYVVDRREFLEKVKAVYASYA*
Ga0070692_109289281	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RGGYLEAHQISDTDQFEIFEKIVDEVAGSGNLKLYYIVDRREFLDKVKSVYAAYA*
Ga0070669_1014252391	3300005353	Switchgrass Rhizosphere	TLAGRLTLMELIRRLRRGGYLEAHQISDTDQFEIFEKIVDEVAGSGNLKLYYIVDRREFLDKVKSVYAAYA*
Ga0070673_1018598862	3300005364	Switchgrass Rhizosphere	LIRRMRKGGYLTAHNISATDQFEIFEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0070659_1016550321	3300005366	Corn Rhizosphere	MRKGGYLAAHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0070667_1020254172	3300005367	Switchgrass Rhizosphere	GGYLATHGITSTDQFEILEKLLDEVAGSGQLKLYFVVDRREFLEKVKSVYASYAN*
Ga0070701_105986821	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	HGITATDQFEILEKLLDEVAGAGQLKLYYIVDRREFLEKVKSVYASYAS*
Ga0070694_1003465481	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	EHGGRTLEGRLTLMELIRRMRRGGYLTTHNIEATDQFEIFEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0070708_1022670081	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RRMRKGGYLATHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0070706_1019533381	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RHGGYLRARGITSTDQFETLEKLLDEVAGSGKLKLYIIVDRRDFLEKVKTVYASYA*
Ga0070686_1015645702	3300005544	Switchgrass Rhizosphere	EHGGRTLEGRLTLLELIRRIRRGGYLNSHGISTTDQFETLDQLVDEVAGSGNLKVYYVVDRREFLEKVKLVYASYA*
Ga0070693_1003996732	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	YLEAHQISDTDQFEIFEKIVDEVAGSGNLKLYYIVDRREFLDKVKSVYAAYA*
Ga0070704_1009480261	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	HGIVEHEQFELLEKLIDKLAGGAGAVKLYYVVDRREFLEKVKLIYERYAT*
Ga0070704_1012131881	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ELLRRMRKGGYLSAHGIEETDQFEVFERLIDEVAGSGAQKFYYVVDRREFIDKVKSVYASYA*
Ga0068857_1000053271	3300005577	Corn Rhizosphere	RLTLMELIKRFRRSGYFEKHQIAVTDQFEVLEKLIDEVAGSGKLKLYYVVDRREFMEKVKAVYTSYA*
Ga0068857_1001397521	3300005577	Corn Rhizosphere	TAHNISATDQFEIFEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0068857_1004738471	3300005577	Corn Rhizosphere	GGYLAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKTVYASYA*
Ga0068857_1025164572	3300005577	Corn Rhizosphere	HGGRTLEGRLTLAGLIRRLRKGGYLAAHNISATDQFEILENLLDEIAGSGALKLYYLVDRREFLDKVKSVYAAYA*
Ga0068854_1012757701	3300005578	Corn Rhizosphere	TLEGRLTLMELIKRMRRGGYLAAHNISSNDQFEILEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0068859_1003738341	3300005617	Switchgrass Rhizosphere	RTLEGRLTLMELIRRMRKGGYLTAHNISATDQFEIFEKLLDEIAGSGQLKLYYIVDRREFLDKIKSVYASYA*
Ga0068859_1005426132	3300005617	Switchgrass Rhizosphere	HEHGGRTLEGRLTLMELIRRMRKGGYLATHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0068859_1016428662	3300005617	Switchgrass Rhizosphere	RRGGYLNSHGISTTDQFEILDRLVDEVAGSGNLKLYYVVDRREFLEKVKAVYASYA*
Ga0068859_1031815552	3300005617	Switchgrass Rhizosphere	GRTLEGRLTLMDLIRRMRKGGYLAVHNIEATDQFEIFEKLIDEVAGSGQLKVYYIVDRREFLDKVKSVYASYA*
Ga0068863_1000444803	3300005841	Switchgrass Rhizosphere	ELIRRMRKGGYLTAHNISATDQFEIFEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0068863_1005769921	3300005841	Switchgrass Rhizosphere	HNISATDQFEILENLLDEIAGSGALKLYYLVDRREFLDKVKSVYAAYA*
Ga0082029_11364821	3300006169	Termite Nest	MRKGGYFAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRRDFIDKVKSVYASYA*
Ga0082029_15320151	3300006169	Termite Nest	LEGRLTLTELIKRMRRGGYLAAHNISSNDQFEILEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0082029_16827172	3300006169	Termite Nest	LIRRMRKGGYFAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIDKVKSVYASYA*
Ga0082029_17369401	3300006169	Termite Nest	IRRMRRGGYLEAHQISETDQFEIFEKLIDEVAGSGNVKLYFVVDRREFLDKVKSVYAAYA
Ga0079220_120591371	3300006806	Agricultural Soil	TLEGRLTLMELIRRMRKGGYLAAHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFREKVKSVYASYA*
Ga0075428_1004611641	3300006844	Populus Rhizosphere	ELIRRMRKGGYLSAHNIDATDQFEIFERLLDEVAGSGQLKLYYLVDRREFIDKVKSVYASYA*
Ga0075421_1005852283	3300006845	Populus Rhizosphere	KGGYLTAHNIEATDQFEIFEKLLDEVAGSGQLKLYHIVDRRDFIDKVKSVYASYA*
Ga0075433_102822762	3300006852	Populus Rhizosphere	KGGYLSAHHIDATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIDKVKSVYASYA*
Ga0075434_1015432811	3300006871	Populus Rhizosphere	LSRSHEHGGRTLEGRLTLMELIRRMRKGGYLATHKIEATDQFEIFEKLLDEVAGAGQLKLYYVVDRREFIDKVKSVYASYA*
Ga0079219_121276592	3300006954	Agricultural Soil	EGRLTLLELLRRMRKGGYLSAHGIEANDQFELFEKLIDEVAGTGPLKLYYIVDRREFIEKVKSVYAAYA*
Ga0105251_103936241	3300009011	Switchgrass Rhizosphere	IHRLRRGGYLAAHGITATDQFEILEKLLDEMAGSGQLKVYFIVDRREFLEKVKTVYASYAT*
Ga0099829_107179222	3300009038	Vadose Zone Soil	LVSRSHKHGGQTLEGRLTLLELVRRLRYGGYLDKHGITEQDQFEILEKLVDDLAGSGSVKLYYIVDRRNFLDKVKSVYARYAM*
Ga0105240_101203911	3300009093	Corn Rhizosphere	MELIRRMRKGGYLSTHNIEATDQFEIFEKLLDEVAGSGQLKLYYLVDRREFIDKAKSVYASYA*
Ga0105240_124573841	3300009093	Corn Rhizosphere	GGYLNAHGITATDQFEILEKILDEVAGSGQQKIYYIVDRREFLEKVKSVYASYAN*
Ga0111539_106614672	3300009094	Populus Rhizosphere	YLNSHGISTTDQFETLDQLVDEVAGSGNLKVYYVVDRIEFLEKVKLVYASYA*
Ga0105245_117678742	3300009098	Miscanthus Rhizosphere	SRSHEHGGRTLEGRLTLMELIRRMRKGGYLATHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0075418_110500062	3300009100	Populus Rhizosphere	RMRKGGYLTAHNIEATDQFEIFEKLLDEVAGSGQLKLYHIVDRRDFIDKVKSVYASYA*
Ga0075418_119730381	3300009100	Populus Rhizosphere	LNAHAITATNQFEILEKLLDEVAGSGQLKLYFIVDRREFLEKVKAVYSSYAN*
Ga0105243_104091192	3300009148	Miscanthus Rhizosphere	LEGRLTLLELIRRIRRGGYLNSHGISTTDQFETLDQLVDEVAGSGNLKVYYVVDRREFLEKVKLVYASYA*
Ga0105243_110922312	3300009148	Miscanthus Rhizosphere	RGGYLAAHGITATDQFEILEKLLDEMAGSGQLKVYFIVDRREFLEKVKTVYASYAT*
Ga0105241_101527851	3300009174	Corn Rhizosphere	RLRKGGYLAAHNISATDQFEILENLLDEIAGSGALKLYYLVDRREFLDKVKSVYAAYA*
Ga0105241_109412852	3300009174	Corn Rhizosphere	IRRMRKGGYLASHSIEGVDQFEIFEKLLDEVAGSGQLKLYYVVDRREFIEKVKSVYASYA
Ga0105242_108600012	3300009176	Miscanthus Rhizosphere	VSRSHEHGGRTLEGRLTLMELIRRMRRGGYLATHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKMKSVYASYA*
Ga0105248_110761631	3300009177	Switchgrass Rhizosphere	RSHEHGGRTLEGRLTLMELIRRMRRGGYLTTHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0105248_119407292	3300009177	Switchgrass Rhizosphere	SHEHGGRTLEGRLTLLELLRRMRKGGYLSAHGIEGADQFEMFEKLIDEVAGSGSLKLYYIVDRREFIDKVKAVYAAYA*
Ga0105249_135944241	3300009553	Switchgrass Rhizosphere	GRTVEGRLTLMELIRRMRKGGYLATHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0105340_14417962	3300009610	Soil	NAHAITATDQFEILEKLLDEVAGSGQLKLYFIVDRREFLEKVKAVYSSYAN*
Ga0126312_109589301	3300010041	Serpentine Soil	ELLRRMRKGGYLSAHGIEARDQFELFEKLIEEVAGSGALKLYYIVDRREFIDKVKSVYASYA*
Ga0126311_103021452	3300010045	Serpentine Soil	MELIRRMRRGGYLDAHGISATDQFEIFEKLLDEVAGSGQLKLYYLVDRREFIDKVKAVYASYA*
Ga0126377_112031332	3300010362	Tropical Forest Soil	LTRHNIEATDQFEIFEKLLDEVAGSGQLKLYYLVDRREFLNKVKSVYASYA*
Ga0134125_117347582	3300010371	Terrestrial Soil	YLVTHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0134124_102042221	3300010397	Terrestrial Soil	AHNISATDQFEILENLLDEIAGSGALKLYYLVDRREFLDKVKSVYAAYA*
Ga0134124_103847381	3300010397	Terrestrial Soil	KGGYLSTHNIEATDQFEIFEKLLDEVAGSGQLKLYYLVDRREFIDKVKSVYASYA*
Ga0134124_110739052	3300010397	Terrestrial Soil	LIRRLRRGGYLEAHGITAFDQFEILEKLLDEVAGSGQLKLYFVVDRREFLEKVKSVYASYAS*
Ga0134127_109606431	3300010399	Terrestrial Soil	GGYLATHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0134127_129724382	3300010399	Terrestrial Soil	RGGYLNAHAITVTDQFEILEKLLDEVAGSGQLKLYFIVDRREFLEKVKAVYSSYAT*
Ga0134123_107663171	3300010403	Terrestrial Soil	EAHQISDTDQFEIFEKIVDEVAGSGNLKLYYIVDRREFLDKVKSVYAAYA*
Ga0105246_115891861	3300011119	Miscanthus Rhizosphere	TLMELIRRMRRGGYLTTHNIEATDQFEIFEKLLDEIAGSGQLKVYYIVDRREFLDKVKSVYASYA*
Ga0105246_121516642	3300011119	Miscanthus Rhizosphere	GYLTTHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0137438_12385632	3300011431	Soil	SRSQQHGGQTLAGRLTLAELARRFRHGDYLHAHGITERDQFEILEQLVEDIAGSGSVKLYYVVDRREFLDKVKSVYEEYAT*
Ga0137388_113451502	3300012189	Vadose Zone Soil	LEGRLTLLELVRRLRYGGYLDKHGITEQDQFEILEKLVDDLAGTGSVKLYYIVDRRNFLDKVKSVYARYAM*
Ga0157304_11077271	3300012882	Soil	RRGGYLSAHGITATDQFEILEKLLDEVAGAGQLKLYYIVDRREFLEKVKSVYASYAS*
Ga0164303_114639362	3300012957	Soil	IRRMRKGGYLAAHSIAGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFTEKVKSVYASYA
Ga0164301_103116852	3300012960	Soil	VHGGLTLEGRLTLLELLRRMRKGGYLNVHGIEGADQFELFEKLIDEVAGSGALKFYYVVDRREFLDKVKAVYAAYA*
Ga0164304_110730551	3300012986	Soil	MELIRRMRKGGYLTTHNIEATDQFEIFEKLLDEVAGSGHLKLYYIVDRREFLDKVKSVYASYA*
Ga0157369_123498762	3300013105	Corn Rhizosphere	LRRGGYLAAHGITATDQFEILEKLLDEMAGSGQLKVYFIVDRREFLEKVKTVYASYAT*
Ga0157378_125698861	3300013297	Miscanthus Rhizosphere	MRKGGYLSLHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIDKVKSVYASYA*
Ga0157372_128893661	3300013307	Corn Rhizosphere	RRMRKGGYLAAHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFREKVKSVYASYA*
Ga0157375_110462462	3300013308	Miscanthus Rhizosphere	SHEHGGRTLEGRLTLIELIRRMRKGGYLTAHNISATDQFEIFEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0120188_10270321	3300013760	Terrestrial	TLMELIRRMRRGGYLAAHNISTTDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0075324_10335051	3300014263	Natural And Restored Wetlands	MRNSGYLAAHSISTTDQFEIFEQLLDEVAGSGQLKVYHLVDRREFIDRVKSVYASYA*
Ga0163163_122539371	3300014325	Switchgrass Rhizosphere	GRLTLMELIRRLRRGGYLAAHNISTTDQFETFEKLLDELAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0157380_127289662	3300014326	Switchgrass Rhizosphere	GRTLEGRLTLMDLIRRMRKGGYLAMHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA*
Ga0157380_132377382	3300014326	Switchgrass Rhizosphere	ELIRRMRKGGYLTAHNIDATDQFEIFEKLIDEVAGSGQLKLYYVVDRRDFIDKVKSVYASYA*
Ga0182000_100739711	3300014487	Soil	HGGRTLEGRLTLMELIRRMRKGGYLAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIDKVKSVYASYA*
Ga0157377_113201352	3300014745	Miscanthus Rhizosphere	MELIKRFRRSGYFEKHQIAVTDQFEVLEKLIDEVAGSGNLKLYYVVDRREFMEKVKAVYTSYA*
Ga0132256_1013692811	3300015372	Arabidopsis Rhizosphere	LMDLIRRMRKGGYLSLHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIDKVKSVYASYA*
Ga0132255_1024817642	3300015374	Arabidopsis Rhizosphere	MRKGGYLAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKTVYASYA*
Ga0132255_1028717491	3300015374	Arabidopsis Rhizosphere	RRLRRGGYLNSHGISTTDQFEILDRLVDEVAGTGNVKLYYEVDRREFLEKAKAVYASYT*
Ga0190270_115615302	3300018469	Soil	MELIRRLRRGGYLNAHAITATDQFEILEKLLDEVAGSGQLKLYFIVDRREFLDKVKAVYSSYAN
Ga0190274_130524761	3300018476	Soil	TLMELIKRLRRGGYLNAHGITSSDQFEILEKLLDEVAGSGQLKLYYIVDRREFLDKVKTVYASYAT
Ga0213902_1063231	3300021290	Soil	HEHGGRTLEGRLTLMELLRRMRKGGYLSAHGIEAADQFEMFEKLIDEVAGSGSLKLYYIVDRREFIDKVKSVYAAYA
Ga0207713_10505071	3300025735	Switchgrass Rhizosphere	KGGYLAAHNIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKTVYASYT
Ga0207643_102837222	3300025908	Miscanthus Rhizosphere	LEGRLTLMELIKRFRRSGYFEKHQIAVTDQFEVLEKLIDEVAGSGNLKLYYVVDRREFMEKVKAVYTSYA
Ga0207684_100662493	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GGYLQAHGISSTDPFETLEKLLDEVAGSGKLKLYFIVDRRDFLKKVKSVYASYA
Ga0207654_102182843	3300025911	Corn Rhizosphere	LRKGGYLAAHNISATDQFEILENLLDEIAGSGALKLYYLVDRREFLDKVKSVYAAYA
Ga0207695_112934161	3300025913	Corn Rhizosphere	QYLISRSHEHGGRTLEGRLTLMDLIRRMRKGGYLAMHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA
Ga0207652_108103502	3300025921	Corn Rhizosphere	LSARGIEAADQFELFEKLIDEVAGSGALKLYYIVDRREFIDKIKSVYAAYA
Ga0207652_112724361	3300025921	Corn Rhizosphere	KGGYLASHSIEGADQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKSVYASYA
Ga0207650_116912361	3300025925	Switchgrass Rhizosphere	HGITATDQFEILEKLLDEVAGSGQLKLYFVVDRREFLEKVKSVYASYASXLRISNMLQSLVQE
Ga0207650_118565052	3300025925	Switchgrass Rhizosphere	LEGRLTLIELIRRMRKGGYLTAHNISATDQFEIFEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA
Ga0207687_117925132	3300025927	Miscanthus Rhizosphere	LSTHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKIKSVYASYA
Ga0207690_116336362	3300025932	Corn Rhizosphere	SRPSSVRSHEHGGRTLEGRLTLMDLIRRMRKGGYLSTHNIEATDQFEIFEKLLDEVAGSGQLKLYYLVDRREFIDKVKSVYASYA
Ga0207709_113742481	3300025935	Miscanthus Rhizosphere	LEGRLTLLELIRRIRRGGYLNSHGISTTDQFETLDQLVDEVAGSGNLKVYYVVDRREFLEKVKLVYASYA
Ga0207670_107218252	3300025936	Switchgrass Rhizosphere	SRSHEHGGRTLEGRLTLMELIRRMRKGGYLATHNIEATDQFEIFEKLLDEVAGSGKLKLYYIVDRREFLDKVKSVYASYA
Ga0207670_111370411	3300025936	Switchgrass Rhizosphere	ELLRRMRKGGYLAAHSIEGVDQFEILEKLLDEVAGSGQLKLYYIVDRREFIEKVKTVYASYA
Ga0207689_102199741	3300025942	Miscanthus Rhizosphere	LRRMRKGGYLAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKSVYASYA
Ga0207689_106732573	3300025942	Miscanthus Rhizosphere	TLEGRLTLIELIRRMRKGGYLTAHNISATDQFEIFEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA
Ga0207689_110097761	3300025942	Miscanthus Rhizosphere	GGYLAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKAVYASYA
Ga0207689_112500512	3300025942	Miscanthus Rhizosphere	RGGYLEAHGITAFDQFEVLEKLLDEVAGSGRLKLYFVVDRREFLEKVKSVYASYAT
Ga0207679_100988544	3300025945	Corn Rhizosphere	ARGAHRLRRGGYLSAHGITATDQFEILEKLLDEVAGAGQLKLYYIVDRREFLEKVKSVYASYAS
Ga0207651_107448313	3300025960	Switchgrass Rhizosphere	MELIRRLRKGGYLAIHNIEATDQFEIFEKLLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYA
Ga0207712_105398682	3300025961	Switchgrass Rhizosphere	AAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFTEKVKSVYASYA
Ga0207640_120999081	3300025981	Corn Rhizosphere	IKRMRRGGYLAAHNISSNDQFEILEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA
Ga0207658_112017331	3300025986	Switchgrass Rhizosphere	GGYLATHGITSTDQFEILEKLLDEVAGSGQLKLYFVVDRREFLEKVKSVYASYAN
Ga0207639_117447211	3300026041	Corn Rhizosphere	LATHGITSTDQFEILEKLLDEVAGSGQLKLYFVVDRREFLEKVKSVYASYAN
Ga0208780_10028732	3300026046	Natural And Restored Wetlands	MRNSGYLAAHSISTTDQFEIFEQLLDEVAGSGQLKVYHLVDRREFIDRVKSVYASYA
Ga0207708_101227501	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	RKGGYLATHNIEATDQFEIFEKLLDEVAGSGKLKLYYIVDRREFLDKVKSVYASYA
Ga0207641_120879641	3300026088	Switchgrass Rhizosphere	SRSHEHGGRTLEGRLTLMELLRRMRKGGYLAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKTVYASYA
Ga0207676_117930512	3300026095	Switchgrass Rhizosphere	KGGYLKAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKSVYASYS
Ga0207676_125562841	3300026095	Switchgrass Rhizosphere	SRSHEHGGRTLEGRLTLMELIKRMRRGGYLATHNISSNDQFEILEKLLDEIAGSGQLKLYYIVDRREFLDKVKSVYASYA
Ga0207674_122248801	3300026116	Corn Rhizosphere	SHEHGGRTLEGRLTLAGLIRRLRKGGYLAAHNISATDQFEILENLLDEIAGSGALKLYYLVDRREFLDKVKSVYAAYA
Ga0207698_110302992	3300026142	Corn Rhizosphere	KGGYLSTHNIEATDQFEIFEKLLDEVAGSGQLKLYYLVDRREFIDKVKSVYASYA
Ga0209215_10146761	3300027266	Forest Soil	VSRSHEHGGRTLEGRLTLMELIRRMRKGGYLAAHSIEGGDQFEIFEKLLDEVAGSGQLKLYYVVDRREFIDKVKSVYASYA
Ga0209818_11597362	3300027637	Agricultural Soil	KGGYLSAHGIEATDQFELFEKLIDEVAGSGSLKLYYIVDRREFIDKVKSVYASYA
Ga0268266_109435911	3300028379	Switchgrass Rhizosphere	HAITSTDQFEILEKLLDEVAGSGQLKLYFVVDRREFLEKVKSVYASYARNLANLS
Ga0268266_121912002	3300028379	Switchgrass Rhizosphere	RLTLMELIRRMRRGGYLTTHNIEATDQFEIFEKVLDEVAGSGQLKLYYIVDRREFLDKVKSVYASYV
Ga0268265_104833742	3300028380	Switchgrass Rhizosphere	LSAHGIEASDQFELLEKLIDEVAGAGALKLYYVVDRREFIEKVKAVYASYA
Ga0268265_109239782	3300028380	Switchgrass Rhizosphere	ELIRRIRRGGYLNSHGISTTDQFETLDQLVDEVAGSGNLKVYYVVDRREFLEKVKLVYASYA
Ga0310888_107369832	3300031538	Soil	MDLIHRLRRGGYLTAHGITATDQFEILEKLLDEVAGSGQLKVYYIVDRREFLEKVKTVYASYAT
Ga0307408_1005515213	3300031548	Rhizosphere	MELIRRLRRGGYLAAHNISTTDQFETFEKLLDELAGSGQLKLYYIVDRREFLDKVKSVYASYA
Ga0310813_102349261	3300031716	Soil	RMRKGGYLAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKSVYASYA
Ga0307405_119331342	3300031731	Rhizosphere	TLMELIHRMRKGGYLSSHNIEATDQFEIFEKLLDEVAGSGQLKLYYLVDRREFIAKVKSVYASYA
Ga0310899_104341701	3300032017	Soil	GVRRLRRGGYLEAHQISDTDQFEIFEKIVDEVAGSGNLKLYYIVDRREFLDKVKSVYAAY
Ga0307415_1021057122	3300032126	Rhizosphere	SHEHGGRTLEGRLTLLELLRRMRKGGYLSAHGIEGADQFEMFEKLIDEVAGSGSLKLYYIVDRREFIDKVKSVYAAYA
Ga0310889_105140901	3300032179	Soil	GGYLNSHGISTTDQFETLDQLVDEVAGSGNLKVYYVVDRREFLENVKLVYASYA
Ga0310810_108496641	3300033412	Soil	MELLRRMRKGGYLSAHGIEANDQFEMFEKLIDEVAGSGPLKLYYIVDRREFIDKVK
Ga0310810_108912942	3300033412	Soil	EGRLTLMELIRRMRKGGYLAAHSIEGVDQFEIFEKLLDEVAGSGQLKLYYIVDRREFIEKVKSVYASYA
Ga0364929_0344014_43_237	3300034149	Sediment	MELIRRLRRGGYLNAHAITATDQFEILEKLLDEVAGSGQLKLYFIVDRREFLEKVKAVYASYAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049210

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences