NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F048838

Metagenome Family F048838

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F048838
Family Type Metagenome
Number of Sequences 147
Average Sequence Length 43 residues
Representative Sequence MNVIIDNLNLSPKQVNALRAAIKARYTPEKVKALNARLKATEGK
Number of Associated Samples 93
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.31 %
% of genes near scaffold ends (potentially truncated) 21.77 %
% of genes from short scaffolds (< 2000 bps) 76.19 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (45.578 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(19.728 % of family members)
Environment Ontology (ENVO) Unclassified
(70.748 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(80.272 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.67%    β-sheet: 0.00%    Coil/Unstructured: 58.33%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 147 Family Scaffolds
PF12705PDDEXK_1 1.36
PF04404ERF 0.68



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms54.42 %
UnclassifiedrootN/A45.58 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876004|none_p0354277Not Available530Open in IMG/M
2236876005|none_p104579All Organisms → Viruses → environmental samples → uncultured marine virus529Open in IMG/M
3300000101|DelMOSum2010_c10054236All Organisms → Viruses → Predicted Viral1978Open in IMG/M
3300000101|DelMOSum2010_c10065530All Organisms → Viruses1711Open in IMG/M
3300000101|DelMOSum2010_c10069891Not Available1623Open in IMG/M
3300000101|DelMOSum2010_c10098156Not Available1226Open in IMG/M
3300000101|DelMOSum2010_c10099689All Organisms → Viruses → Predicted Viral1211Open in IMG/M
3300000101|DelMOSum2010_c10114267All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1081Open in IMG/M
3300000101|DelMOSum2010_c10135766All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.933Open in IMG/M
3300000101|DelMOSum2010_c10285725Not Available500Open in IMG/M
3300000116|DelMOSpr2010_c10034612All Organisms → Viruses → Predicted Viral2331Open in IMG/M
3300000117|DelMOWin2010_c10167464Not Available707Open in IMG/M
3300000117|DelMOWin2010_c10249727Not Available519Open in IMG/M
3300001347|JGI20156J14371_10079362Not Available1162Open in IMG/M
3300001347|JGI20156J14371_10081743All Organisms → Viruses → Predicted Viral1129Open in IMG/M
3300001348|JGI20154J14316_10141155Not Available669Open in IMG/M
3300001352|JGI20157J14317_10079454All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.1288Open in IMG/M
3300001353|JGI20159J14440_10192731Not Available565Open in IMG/M
3300003580|JGI26260J51721_1068197Not Available523Open in IMG/M
3300004457|Ga0066224_1056959All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1427Open in IMG/M
3300004461|Ga0066223_1067001Not Available593Open in IMG/M
3300004461|Ga0066223_1154685All Organisms → Viruses → Predicted Viral1549Open in IMG/M
3300005747|Ga0076924_1313307All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300006029|Ga0075466_1010300All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium3205Open in IMG/M
3300006029|Ga0075466_1014781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2607Open in IMG/M
3300006029|Ga0075466_1048083All Organisms → Viruses → Predicted Viral1267Open in IMG/M
3300006803|Ga0075467_10201645All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1106Open in IMG/M
3300006803|Ga0075467_10395693All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.720Open in IMG/M
3300006920|Ga0070748_1042437Not Available1828Open in IMG/M
3300006920|Ga0070748_1363161Not Available509Open in IMG/M
3300007539|Ga0099849_1141148All Organisms → Viruses → environmental samples → uncultured marine virus937Open in IMG/M
3300007540|Ga0099847_1070490All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1083Open in IMG/M
3300007540|Ga0099847_1153966All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.683Open in IMG/M
3300007540|Ga0099847_1196164Not Available590Open in IMG/M
3300009003|Ga0102813_1099375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium930Open in IMG/M
3300009003|Ga0102813_1169558Not Available678Open in IMG/M
3300009054|Ga0102826_1171351All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009056|Ga0102860_1246614Not Available517Open in IMG/M
3300009071|Ga0115566_10325587Not Available901Open in IMG/M
3300009074|Ga0115549_1127250Not Available838Open in IMG/M
3300009076|Ga0115550_1030683All Organisms → Viruses → Predicted Viral2401Open in IMG/M
3300009076|Ga0115550_1222204Not Available628Open in IMG/M
3300009079|Ga0102814_10030548All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.3060Open in IMG/M
3300009079|Ga0102814_10059401All Organisms → Viruses → Predicted Viral2112Open in IMG/M
3300009079|Ga0102814_10325483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium836Open in IMG/M
3300009086|Ga0102812_10331349All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.828Open in IMG/M
3300009130|Ga0118729_1034508All Organisms → Viruses → Predicted Viral3113Open in IMG/M
3300009130|Ga0118729_1122186All Organisms → Viruses → Predicted Viral1222Open in IMG/M
3300009423|Ga0115548_1134081Not Available788Open in IMG/M
3300009426|Ga0115547_1183457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium662Open in IMG/M
3300009435|Ga0115546_1066821All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.1352Open in IMG/M
3300009440|Ga0115561_1261585Not Available644Open in IMG/M
3300009443|Ga0115557_1275354Not Available638Open in IMG/M
3300009443|Ga0115557_1368397Not Available533Open in IMG/M
3300009447|Ga0115560_1351788Not Available558Open in IMG/M
3300009449|Ga0115558_1422453Not Available518Open in IMG/M
3300009449|Ga0115558_1428739Not Available513Open in IMG/M
3300009496|Ga0115570_10153830Not Available1072Open in IMG/M
3300009507|Ga0115572_10084235All Organisms → Viruses → Predicted Viral1932Open in IMG/M
3300009507|Ga0115572_10310727All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.892Open in IMG/M
3300009507|Ga0115572_10716283Not Available544Open in IMG/M
3300009508|Ga0115567_10064938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2679Open in IMG/M
3300010368|Ga0129324_10202268All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.806Open in IMG/M
3300011118|Ga0114922_10735921All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage808Open in IMG/M
3300011258|Ga0151677_1050955All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1164Open in IMG/M
3300017697|Ga0180120_10259405Not Available704Open in IMG/M
3300017719|Ga0181390_1016375All Organisms → Viruses → environmental samples → uncultured marine virus2490Open in IMG/M
3300017719|Ga0181390_1072760Not Available963Open in IMG/M
3300017786|Ga0181424_10026168All Organisms → Viruses → Predicted Viral2530Open in IMG/M
3300017786|Ga0181424_10361028Not Available596Open in IMG/M
3300018416|Ga0181553_10685149Not Available537Open in IMG/M
3300018417|Ga0181558_10046141All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2975Open in IMG/M
3300020165|Ga0206125_10015333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium4936Open in IMG/M
3300020185|Ga0206131_10077644Not Available2023Open in IMG/M
3300020187|Ga0206130_10063170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2477Open in IMG/M
3300020187|Ga0206130_10182840Not Available1036Open in IMG/M
3300020385|Ga0211677_10036752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2319Open in IMG/M
3300020385|Ga0211677_10206998Not Available811Open in IMG/M
3300021389|Ga0213868_10130090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1584Open in IMG/M
3300021957|Ga0222717_10000487All Organisms → cellular organisms → Bacteria34240Open in IMG/M
3300021957|Ga0222717_10020171All Organisms → Viruses → environmental samples → uncultured marine virus4481Open in IMG/M
3300021957|Ga0222717_10092587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1896Open in IMG/M
3300021957|Ga0222717_10159380Not Available1367Open in IMG/M
3300021957|Ga0222717_10273430All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300021957|Ga0222717_10312105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium894Open in IMG/M
3300021960|Ga0222715_10314447All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300022061|Ga0212023_1019112Not Available924Open in IMG/M
3300022072|Ga0196889_1064671Not Available695Open in IMG/M
3300022306|Ga0224509_10084532All Organisms → Viruses → Predicted Viral1094Open in IMG/M
(restricted) 3300022913|Ga0233404_10049397All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.964Open in IMG/M
(restricted) 3300022913|Ga0233404_10058809All Organisms → Viruses → environmental samples → uncultured marine virus886Open in IMG/M
3300022925|Ga0255773_10053495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2384Open in IMG/M
(restricted) 3300022938|Ga0233409_10284198Not Available573Open in IMG/M
(restricted) 3300023112|Ga0233411_10008956Not Available2862Open in IMG/M
(restricted) 3300023112|Ga0233411_10020113All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1977Open in IMG/M
(restricted) 3300023112|Ga0233411_10058898All Organisms → cellular organisms → Bacteria1201Open in IMG/M
(restricted) 3300023112|Ga0233411_10076890All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1056Open in IMG/M
(restricted) 3300023210|Ga0233412_10018889All Organisms → Viruses → environmental samples → uncultured marine virus2734Open in IMG/M
(restricted) 3300023210|Ga0233412_10071357Not Available1433Open in IMG/M
(restricted) 3300023271|Ga0233403_10084805Not Available948Open in IMG/M
(restricted) 3300023271|Ga0233403_10164979Not Available650Open in IMG/M
(restricted) 3300023276|Ga0233410_10098097All Organisms → Viruses → environmental samples → uncultured marine virus906Open in IMG/M
(restricted) 3300024062|Ga0255039_10084817All Organisms → cellular organisms → Bacteria1247Open in IMG/M
(restricted) 3300024062|Ga0255039_10138000Not Available995Open in IMG/M
(restricted) 3300024062|Ga0255039_10316661Not Available667Open in IMG/M
3300024180|Ga0228668_1010598All Organisms → Viruses → Predicted Viral2269Open in IMG/M
3300024191|Ga0228636_1006409All Organisms → Viruses → environmental samples → uncultured marine virus2892Open in IMG/M
3300024321|Ga0228626_1007975All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.3222Open in IMG/M
3300024328|Ga0228635_1013303All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2814Open in IMG/M
3300024329|Ga0228631_1056293All Organisms → Viruses → environmental samples → uncultured marine virus1040Open in IMG/M
3300024329|Ga0228631_1074954Not Available850Open in IMG/M
3300024334|Ga0228671_1013336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2483Open in IMG/M
3300024346|Ga0244775_10071616All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2970Open in IMG/M
(restricted) 3300024518|Ga0255048_10206952Not Available957Open in IMG/M
(restricted) 3300024520|Ga0255047_10134168Not Available1268Open in IMG/M
(restricted) 3300024520|Ga0255047_10296099Not Available819Open in IMG/M
(restricted) 3300024529|Ga0255044_10330081Not Available628Open in IMG/M
3300025543|Ga0208303_1000752Not Available13304Open in IMG/M
3300025543|Ga0208303_1053492Not Available971Open in IMG/M
3300025577|Ga0209304_1055406All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1024Open in IMG/M
3300025577|Ga0209304_1055930All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.1017Open in IMG/M
3300025594|Ga0209094_1049257All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.1102Open in IMG/M
3300025621|Ga0209504_1024080Not Available2243Open in IMG/M
3300025621|Ga0209504_1024849Not Available2188Open in IMG/M
3300025637|Ga0209197_1189670Not Available523Open in IMG/M
3300025641|Ga0209833_1018049Not Available2887Open in IMG/M
3300025641|Ga0209833_1118787Not Available736Open in IMG/M
3300025641|Ga0209833_1152266Not Available605Open in IMG/M
3300025704|Ga0209602_1150659Not Available747Open in IMG/M
3300025876|Ga0209223_10112056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1470Open in IMG/M
3300025880|Ga0209534_10486310Not Available511Open in IMG/M
3300025881|Ga0209309_10069214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2022Open in IMG/M
3300026479|Ga0228622_1030789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1391Open in IMG/M
3300026483|Ga0228620_1026774All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300027751|Ga0208304_10154647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium842Open in IMG/M
3300027757|Ga0208671_10160969Not Available813Open in IMG/M
(restricted) 3300027861|Ga0233415_10000741Not Available14933Open in IMG/M
(restricted) 3300027861|Ga0233415_10058920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1622Open in IMG/M
(restricted) 3300027861|Ga0233415_10214131Not Available892Open in IMG/M
(restricted) 3300027861|Ga0233415_10342823Not Available710Open in IMG/M
(restricted) 3300027996|Ga0233413_10015840All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2803Open in IMG/M
(restricted) 3300027996|Ga0233413_10245085Not Available762Open in IMG/M
(restricted) 3300027996|Ga0233413_10255147Not Available747Open in IMG/M
3300028008|Ga0228674_1033730All Organisms → Viruses → environmental samples → uncultured marine virus2037Open in IMG/M
3300028396|Ga0228643_1132797All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.568Open in IMG/M
3300031519|Ga0307488_10203717All Organisms → Viruses → Predicted Viral1338Open in IMG/M
3300032277|Ga0316202_10023732Not Available2989Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine19.73%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater14.97%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.20%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater8.16%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine7.48%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine6.80%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.44%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.76%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine4.76%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.72%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.04%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.04%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.04%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.36%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine1.36%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.36%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.68%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.68%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.68%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.68%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.68%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.68%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.68%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876004Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-0p1-ETM-15mEnvironmentalOpen in IMG/M
2236876005Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-3LG-ETM-15mEnvironmentalOpen in IMG/M
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001347Pelagic Microbial community sample from North Sea - COGITO 998_met_06EnvironmentalOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001353Pelagic Microbial community sample from North Sea - COGITO 998_met_09EnvironmentalOpen in IMG/M
3300003580Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNAEnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300005747Seawater microbial communities from Vineyard Sound, MA, USA - control T14EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300009003Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725EnvironmentalOpen in IMG/M
3300009054Estuarine microbial communities from the Columbia River estuary - metaG S.737EnvironmentalOpen in IMG/M
3300009056Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009130Combined Assembly of Gp0139511, Gp0139512EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022306Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_24EnvironmentalOpen in IMG/M
3300022913 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_2_MGEnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300022938 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MGEnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300023271 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_1_MGEnvironmentalOpen in IMG/M
3300023276 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MGEnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300024180Seawater microbial communities from Monterey Bay, California, United States - 82DEnvironmentalOpen in IMG/M
3300024191Seawater microbial communities from Monterey Bay, California, United States - 45DEnvironmentalOpen in IMG/M
3300024321Seawater microbial communities from Monterey Bay, California, United States - 31DEnvironmentalOpen in IMG/M
3300024328Seawater microbial communities from Monterey Bay, California, United States - 44DEnvironmentalOpen in IMG/M
3300024329Seawater microbial communities from Monterey Bay, California, United States - 39DEnvironmentalOpen in IMG/M
3300024334Seawater microbial communities from Monterey Bay, California, United States - 89DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300024529 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025577Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025621Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)EnvironmentalOpen in IMG/M
3300025637Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025704Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)EnvironmentalOpen in IMG/M
3300025876Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300026479Seawater microbial communities from Monterey Bay, California, United States - 26DEnvironmentalOpen in IMG/M
3300026483Seawater microbial communities from Monterey Bay, California, United States - 23DEnvironmentalOpen in IMG/M
3300027751Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)EnvironmentalOpen in IMG/M
3300027757Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300028008Seawater microbial communities from Monterey Bay, California, United States - 1D_rEnvironmentalOpen in IMG/M
3300028396Seawater microbial communities from Monterey Bay, California, United States - 55DEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_035427722236876004Marine EstuarineMNVYIDNLKLTDQQVIAIRAAIKARYTPARVRALNAKLKATEGK
none_10457912236876005Marine EstuarineMTVYIDNLHLTAKQLRELRAAIKARYTPERVKALNARLKAAEGK
DelMOSum2010_1005423633300000101MarineMTVYIDNLNLTAKQLRELRAAIKASYTPEKVKALNAKIKAAXGK*
DelMOSum2010_1006553013300000101MarineMTVYIDNLHLTAKQLRELRAAIKERYTPEKVKALNGRIKAAEGK*
DelMOSum2010_1006989143300000101MarineMHISQLKVNMNVYIDNLNLTAKQVEALRVAIKARYTPEKVKALNARIKAAEGK*
DelMOSum2010_1009815653300000101MarineMNVYIDNLNLTAKQVEALRAAIKERYTPEKVKALNARIKATKGK*
DelMOSum2010_1009968933300000101MarineMTVYIDNLNLTAKQXRELRAAIKERYTPEKVKALNARIKAAEGK*
DelMOSum2010_1011426713300000101MarineMTVYIDNLNLTAKQVRELRAAIKERYTPEKVKALN
DelMOSum2010_1013576613300000101MarineMNVYIDNLNLTAKQVEALRVAIKARYTPARVKALNARIRAVKGK*
DelMOSum2010_1028572513300000101MarineMTVYIDNLNLTAKQVRELRAAIKARYTPARVKALNARIKAAEGK*
DelMOSpr2010_1003461223300000116MarineMTVYIDNLNLTAKQLCELRAAIKERYTSEKVKALNARIKAAEGK*
DelMOWin2010_1016746433300000117MarineLGEDSMTVYIENLKLTAKQVEALRVAIKARYTPARVRALNAKIRAVEGK*
DelMOWin2010_1024972713300000117MarineMTVYIENLKLTAKQVEALRVAIKTRYTPARVKVLNAKIRAAEGK*
JGI20156J14371_1007936243300001347Pelagic MarineMKVIIEGLNLSNKQLIELRAAIKARYTPEKVKALNARLKATEGK*
JGI20156J14371_1008174333300001347Pelagic MarineMNVIIEGLNLSNKQLIALRAAIKARYTPEKVKALNARLKATEGK*
JGI20154J14316_1014115523300001348Pelagic MarineMNVHIDNLNLTAKQVEALRVSIKARYTPARVKALNAKIRAAKGK*
JGI20157J14317_1007945413300001352Pelagic MarineMNVLIEGLNLSNGQLIKLRAAIKARYTPEKVKALNARLKATEGK*
JGI20159J14440_1019273113300001353Pelagic MarineMNVIIEGLNLSNKQLIELRAAIKARYTPEKVKALNAR
JGI26260J51721_106819723300003580MarineMNVIIDNLNLSPKQVNALRAAMKARYTPERVRALNARLKTAEGK*
Ga0066224_105695913300004457MarineMTVYIDNLNLTAKQLRELRAAIKERYTPEKVKSLNARIKAAEGK*
Ga0066223_106700113300004461MarineMNVYINNLNLTAKQVEALRVAIKARYTPARVKALNAKIRAAKGK*
Ga0066223_115468543300004461MarineMTVYIDNLNLTAKQLRERRAAIKERYTPEKVKSLNARIKAAEGK*
Ga0076924_131330723300005747MarineMNVYINDLNLTAKQVEALRVAIKERYTPEKVKSLNARIKA
Ga0075466_101030043300006029AqueousMNVIIEGLNLSNRQVNTLRAAIKARYTPEKVKALNARLKATEGK*
Ga0075466_101478133300006029AqueousMNVIIEGLNLSSRQLIELRAAIKARYTPEKVKALNARLKATEGK*
Ga0075466_104808323300006029AqueousMTVYIDGLSLTPKQIDALRVAIKTRYTPARVKVLNAKIRAAEGK*
Ga0075467_1020164523300006803AqueousMTVYIDGLSLTPKQIDALRIAIKTRYTPARVKAFNAKIRAAEGK*
Ga0075467_1039569323300006803AqueousMTVYIENLKLTAKQVEALRVAIKARYTPARVRALNAKIRAVEGK*
Ga0070748_104243743300006920AqueousMNVIIEGLNLSNRQLIELRAAIKARYTPEKVKALNARLKATEGK*
Ga0070748_136316113300006920AqueousMTVYIENLNLTAKQIDALRVNIKARYTPEKVKALNAKIRAAEGK*
Ga0099849_114114823300007539AqueousMTVYINNLNLTAKQVEALRVAIKARYTPEKVKALNARIKATKGK*
Ga0099847_107049013300007540AqueousMTVYIDNLNLTAKQLRELRAAIKERYTPEKVKALNARIKANKGK*
Ga0099847_115396613300007540AqueousMTVYIENLKLTAKQVEALRVAIKARYTPARVRALNAKIRAV
Ga0099847_119616423300007540AqueousMTVYIDNLNLTAKQLRELRAAIKERYTPERVKALNARIKAAEGK*
Ga0102813_109937523300009003EstuarineMNVIIDNINLSPKQVKAVRAAIKARYTPERVKALNARLKAAEGK*
Ga0102813_116955813300009003EstuarineNLSPKQVNALRAAIKARYTPEKVKALNARLKAAEGK*
Ga0102826_117135113300009054EstuarineMNVIIEGLNLSPKQVNALRAAIKARYTPEKVKTLNARLKATEGK*
Ga0102860_124661413300009056EstuarineMNVTIDNLHLTAKQLRELRAAIKARYTPEKVKALNARLKATEGK*
Ga0115566_1032558723300009071Pelagic MarineMNVIIEGLNLSNRQLIKLRAAIKARYTPEKVKALNARLKATEGK*
Ga0115549_112725013300009074Pelagic MarineMNVIIEGLNLSNKQLIELRAAIKARYTPEKVKALNARLKATEGK*
Ga0115550_103068363300009076Pelagic MarineMTVYIDNLNLTAKQVEALRVAIKARYTPARVRALNARIKATKGK*
Ga0115550_122220423300009076Pelagic MarineMNVIIEGLNLSNKQLIDLRAAIKARYTPEKVKALNARLKATEGK*
Ga0102814_1003054863300009079EstuarineMTVYIDNLNLTAKQLRELRAAIKARYTPEKVKALNARLKATEGK*
Ga0102814_1005940153300009079EstuarineMNVIIDNLNLSPKQVNALRAAIKARYTPEKVKALNARLKATEGK*
Ga0102814_1032548313300009079EstuarineMNVTIDNLNLSPKQVNALRAAIKARYTPERVKALNARLKAAEGK*
Ga0102812_1033134913300009086EstuarineMNVIIDNLNLTAKQLRELRAAIKARYTPEKVKALNARLKAAE
Ga0118729_103450833300009130MarineMNVYIDNLNLTPKQINALRVAIKARYTPARVKVLNTKIRAAEGK*
Ga0118729_112218633300009130MarineMNVYIDNINLTPKQIDALRVAIKARYTPARVKALNAKIRAAEGK*
Ga0115548_113408123300009423Pelagic MarineMNVIIEGLNLSNGQLIELRAAIKARYTPEKVKALNARLKATEGK*
Ga0115547_118345723300009426Pelagic MarineMNVIIEGLNLSNKQLIELRAAIKARYTPEKVKALNARL
Ga0115546_106682123300009435Pelagic MarineMNVIIEGLNLSNKQLIELRAAIKARYTPEKVKALNARLK
Ga0115561_126158513300009440Pelagic MarineMNVIIEGLNLSNRQLIELRAAIKARYTPEKVKALNAR
Ga0115557_127535423300009443Pelagic MarineMNVIIEGLNLSNKQLIKLRAAIKARYTPEKVKALNARLKATEGK*
Ga0115557_136839723300009443Pelagic MarineMNVIIEGLNLSNKQLIKLRAAIKARYTPEKVKALN
Ga0115560_135178823300009447Pelagic MarineMNVIIEGLNLSNKQLIALRAAIKARYTPEKVRTLNAR
Ga0115558_142245313300009449Pelagic MarineIIEGLNLSNKQLIALRAAIKARYTPEKVKALNARLKATEGK*
Ga0115558_142873923300009449Pelagic MarineMNVIIEGLNLSNKQLIALRAAIKARYTPEKVKALNARLKATE
Ga0115570_1015383013300009496Pelagic MarineMNVIIEGLNLSNRQLIELRAAIRARYTPEKVKALNARLKATEGK*
Ga0115572_1008423523300009507Pelagic MarineMNVLIEGLNLSNKQLIDLRAAIKARYTPEKVKALNARLKATEGK*
Ga0115572_1031072713300009507Pelagic MarineMNVIIEGLNLSNRQLIKLRAAIKARYTPEKVKALNARLK
Ga0115572_1071628313300009507Pelagic MarineITINKGKNMNVIIEGLNLSNKQLIDLRAAIKARYTPEKVKALNARLKATEGK*
Ga0115567_1006493843300009508Pelagic MarineMNVIIEGLNLSNKQLIELRAAIRARYTPEKVKALNARLKATEGK*
Ga0129324_1020226813300010368Freshwater To Marine Saline GradientMTVYIENLKLTAKQVEALRVAIKTRYTPARVKVLNAKIRA
Ga0114922_1073592123300011118Deep SubsurfaceMTVYIDNLNLTAKQLRELRVAIKERYTPEKVKALNARIKANKGK*
Ga0151677_105095523300011258MarineMTVYIDNLNLTAKQVRELRAAIKARYTPEKVKALNARIKAAEGK*
Ga0180120_1025940523300017697Freshwater To Marine Saline GradientMTVYIENLNLTAKQIDALRVNIKARYTPEKVKALNAKIRAAEGK
Ga0181390_101637533300017719SeawaterMNVYIDNLNLTAKQVRELRAAIKARYTPERVKTLNARLKAAEGK
Ga0181390_107276023300017719SeawaterMNVIIDNLNLTAKQLRELRAAIKARYTPEKVKALNAKIRAAEGK
Ga0181424_1002616883300017786SeawaterMNVYIDNLKLTPEQVNTIRAAIKARCTPAKVEALNVRIKATEGK
Ga0181424_1036102813300017786SeawaterMTVCIDNLNLTAKQVEALRVAIKERYTPERVKALNARIKATKGK
Ga0181553_1068514913300018416Salt MarshKGKKMNVIIEGLNLSNRQVNTLRAAIKARYTPEKVKALNARLKATEGK
Ga0181558_1004614143300018417Salt MarshMNVIIEGLNLSNRQVNTLRAAIKARYTPEKVKALNARLKATGGK
Ga0206125_1001533343300020165SeawaterMNVIIEGLNLSNKQLIDLRAAIKARYTPEKVKALNARLKATEGK
Ga0206131_1007764433300020185SeawaterMNVIIEGLNLSNGQLIKLRAAIKARYTPEKVKALNARLKATEGK
Ga0206130_1006317033300020187SeawaterMNVIIEGLNLSNRQLIELRAAIKARYTPEKVKALNARLKATEGK
Ga0206130_1018284023300020187SeawaterMNVIIEGLNLSNRQLIKLRAAIKARYTPEKVKALNARLKATEGK
Ga0211677_1003675223300020385MarineMNVYINNLKLSPKQVNAIRAAIKARYTPARVKALNAKLKATEGR
Ga0211677_1020699813300020385MarineMNVYIDNLKLTDKQVIAIRAAIKARYTPTRVKALNAKLKATEGK
Ga0213868_1013009023300021389SeawaterMNAIIEGLNLSPRQLIELRAAIKARYTPEKVKALNARLKATEGK
Ga0222717_10000487333300021957Estuarine WaterMNVIIEGLNLSNKQLIALRAAIKARYTPEKVKALNARLKATEGK
Ga0222717_1002017133300021957Estuarine WaterMNVYIDNLNLTAKQVRELRAAIKARYTPEKVKALNARIKATKGK
Ga0222717_1009258723300021957Estuarine WaterMNVIIDNINLSPKQVKAVRAAIKARYTPERVKALNARLKAAEGK
Ga0222717_1015938023300021957Estuarine WaterMNVIIEGLNLSPKQVNALRAAIKARYTPEKVRALNARLKATEGK
Ga0222717_1027343013300021957Estuarine WaterMNVTIDNLNLSPKQVNALRAAIKARYTPERVKALNARLKAAEGK
Ga0222717_1031210523300021957Estuarine WaterMNVIIEGLNLSPKQVNALRAAIKARYTPEKVKALNARLKAAEGK
Ga0222715_1031444713300021960Estuarine WaterMNVIIEGLNLSPKQVNALRAAIKARYTPEKVKALNARLKATE
Ga0212023_101911223300022061AqueousMTVYIENLKLTAKQVEALRVAIKARYTPARVRALNAKIRAVEGK
Ga0196889_106467113300022072AqueousMNVIIEGLNLSSRQLIELRAAIKARYTPEKVKALNARLKATEGK
Ga0224509_1008453223300022306SedimentMNVYIDNLKLTPEQVNTIRAAIKARCTPAKVEALNARIKATEGK
(restricted) Ga0233404_1004939733300022913SeawaterMNVIIDNLNLSPKQVNALRAAMKARYTPERVKALNTRLKAAEGK
(restricted) Ga0233404_1005880923300022913SeawaterMNVIIEGLNLSTKQVNALRAAIKARYTPEKVKALNARLKATEGK
Ga0255773_1005349523300022925Salt MarshMNVIIEGLNLSNRQVNTLRAAIKARYTPEKVKALNARLKATEGK
(restricted) Ga0233409_1028419813300022938SeawaterMNVIIKGLNLSPRQVNALRAAIKARYTPERVKALNARLKAAEGK
(restricted) Ga0233411_1000895633300023112SeawaterMNVIIDNLNLSPKQVHELRAAIKARYTPERVKALNARLKAAEGK
(restricted) Ga0233411_1002011333300023112SeawaterMTVYIDNLHLTAKQLRELRAAIKARYTPERVKALNARLKALEGK
(restricted) Ga0233411_1005889823300023112SeawaterMNVIIEGLNLSTKQVNELRAAIKARYTPEKVKALNARLKAAEGK
(restricted) Ga0233411_1007689023300023112SeawaterMNVIIKGLNLSPKQVNALRAAMKARYTPERVKALNARLKAAEGK
(restricted) Ga0233412_1001888943300023210SeawaterMTVYIDNLHLTAKQLRELRAAIKARYTPEKVKALNARLKAAEGK
(restricted) Ga0233412_1007135723300023210SeawaterMNVIIEGLNLSPKQVNALRAAIKARYTPERVKALNARLKITEGK
(restricted) Ga0233403_1008480523300023271SeawaterMNVIIEGLNLSPKQVNELRAAIKARYTPEQVKALSARLKAA
(restricted) Ga0233403_1016497923300023271SeawaterMNVIIEGLNLSPKQVNALRAAIKARYTPERVKALNARLKAAEGK
(restricted) Ga0233410_1009809723300023276SeawaterMNVIIEGLNLSPNQVNALRAAIKARYTPERVKALNARLKAAEGK
(restricted) Ga0255039_1008481723300024062SeawaterMNVIIEGLNLSPKQVNELRAAIKARYTPEKVKALNARLKATEGK
(restricted) Ga0255039_1013800023300024062SeawaterMNVIIDNLNLSPKQVNALRAAMKARYTPEKVKALNARLKAAEGK
(restricted) Ga0255039_1031666123300024062SeawaterMNVTIDNLHLTAKQLNALRAAIKARYTSEKVKALNARLKAAEGK
Ga0228668_101059863300024180SeawaterMNVYIDNLKLTPEQVNTIRAAIKARYTPAKVEALNVRIKATEGK
Ga0228636_100640923300024191SeawaterMNVYIGNLNLTPKQIDALRVAIKARYTPARVKALNAKIRAAEGK
Ga0228626_100797563300024321SeawaterMNVYIDRLKLTDQQVIALRVAIKARYTPARVKALNAKIRAAEGK
Ga0228635_101330333300024328SeawaterMNVYIDNINLTPKQIDALRVAIKARYTPARVRALNAKIRAAEGK
Ga0228631_105629313300024329SeawaterMNVYIGNLNLTPKQIDALRVAIKARYTPARVKALNAK
Ga0228631_107495433300024329SeawaterYIDNINLTPKQIDALRVAIKARYTPARVKALNAKIRAAEGK
Ga0228671_101333623300024334SeawaterMNVYIDNINLTPKQIDALRVAIKARYTPARVKALNAKIRAAEGK
Ga0244775_1007161633300024346EstuarineMTVYIDNLNLTAKQLRELRAAIKARYTPEKVKALNARLKATEGK
(restricted) Ga0255048_1020695213300024518SeawaterMNVIIDNLNLTAKQLRELRAAIKARYTPEKVKALNARLKATEGK
(restricted) Ga0255047_1013416813300024520SeawaterNMNVIIDNLNLSPKQVNALRAAIKARYTPEKVKALNARLKATEGK
(restricted) Ga0255047_1029609913300024520SeawaterMNVTIDNLHLTAKQLNALRAAIKARYTPEKVKALNARLKATEGK
(restricted) Ga0255044_1033008113300024529SeawaterMNVTIDNLHLTAKQLRELRAAIKARYTPEKVKTLNARLKAAEGK
Ga0208303_1000752133300025543AqueousMTVYINNLNLTAKQVEALRVAIKARYTPEKVKALNARIKATKGK
Ga0208303_105349233300025543AqueousMTVYIDNLNLTAKQLRELRAAIKERYTPERVKALNARIKAAEGK
Ga0209304_105540623300025577Pelagic MarineMNVIIEGLNLSNGQLIELRAAIKARYTPEKVKALNARLKATEGK
Ga0209304_105593013300025577Pelagic MarineMNVIIEGLNLSNKQLIELRAAIKARYTPEKVKALNARLKATEGK
Ga0209094_104925713300025594Pelagic MarineMNVIIEGLNLSNRQLIELRAAIKARYTPEKVKALNARL
Ga0209504_102408033300025621Pelagic MarineMNVHIDNLNLTAKQVEALRVSIKARYTPARVKALNAKIRAAKGK
Ga0209504_102484923300025621Pelagic MarineMTVYIDNLNLTAKQVEALRVAIKARYTPARVRALNARIKATKGK
Ga0209197_118967023300025637Pelagic MarineMNVIIEGLNLSNRQLIELRAAIKARYTPEKVKALN
Ga0209833_101804933300025641Pelagic MarineMNVLIEGLNLSNGQLIKLRAAIKARYTPEKVKALNARLKATEGK
Ga0209833_111878713300025641Pelagic MarineMKVIIEGLNLSNKQLIELRAAIKARYTPEKVKALNARLKATEGK
Ga0209833_115226613300025641Pelagic MarineMNVIIEGLNLSNRQLIELRAAIKARYTPEKVKALNARLKAT
Ga0209602_115065933300025704Pelagic MarineMNVIIEGLNLSNRQLIELRAAIKARYTPEKVKALNARLK
Ga0209223_1011205613300025876Pelagic MarineMNVIIKGLNLSNRQLIELRAAIKARYTPEKVKALNARLKATEGK
Ga0209534_1048631013300025880Pelagic MarineLEGLNLSNKQLIDLRAAIKARYTPEKVKTLNARLKATEGK
Ga0209309_1006921413300025881Pelagic MarineMNVIIEGLNLSNKQLIELRAAIRARYTPEKVKALNARLKATEGK
Ga0228622_103078913300026479SeawaterMNVYIDNINLTPKQIDALRVAIKARYTPARVKALNAKIRA
Ga0228620_102677413300026483SeawaterMNVYIDNINLTPKQIDALRVAIKARYTPARVKALNAKIRAAEG
Ga0208304_1015464723300027751EstuarineMNVIIEGLNLSPKQVNALRAAIKARYTPEKVKTLNARLKATEGK
Ga0208671_1016096923300027757EstuarineMNVIIDNINLSPKQVKAVRAAIKARYTPEKVKALNARLKATEGK
(restricted) Ga0233415_10000741153300027861SeawaterMNVIIKGLNLSTKQVNALRAAIKARYTPERVKALNARLKAAEGK
(restricted) Ga0233415_1005892023300027861SeawaterMNVIIEGLNLSPKQVNALRAAIKARYTPEKVKALNARLKATEGK
(restricted) Ga0233415_1021413133300027861SeawaterMNVIIEGLNLSTKQVNELRAAIKARYTPERVKALNARLKATEGK
(restricted) Ga0233415_1034282323300027861SeawaterMNVIIDNLNLTAKQLRELRAAIKARYTPEKVKALNARLKAAEGK
(restricted) Ga0233413_1001584053300027996SeawaterMNVYIDNLKLTDQQVIAIRAAIKARCTPAKVRALNAKLKATEGK
(restricted) Ga0233413_1024508523300027996SeawaterMNVTIDNLHLTAKQLRELRAAIKARYTPEKVKALNARLKAAEGK
(restricted) Ga0233413_1025514713300027996SeawaterMNVIIDNLNLSPKQVNALRAAIKARYTPERVKALNARLKATEGK
Ga0228674_103373023300028008SeawaterMNVYIGNLNLTAKQVQALRVAIKARYTPARVKALNAKIRAAEGK
Ga0228643_113279713300028396SeawaterMNVYIDNLKLTPEQVNTIRAAIKARYTPAKVEALNVRIKATE
Ga0307488_1020371723300031519Sackhole BrineMTVYIDNLKLTAKQLRELRAAIKERYTPEKVKALNARIKATEGK
Ga0316202_1002373253300032277Microbial MatMNVYIDNLNLTAKQVEALRVAIKARYTPEKVKALNARIKATESK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.