Metagenome Family F047723

Basic Information
Family ID	F047723
Family Type	Metagenome
Number of Sequences	149
Average Sequence Length	41 residues
Representative Sequence	AALNVPSANNLLKVLGNLKATKKASAKKLVPKKIAINISLT
Number of Associated Samples	128
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.68 %
% of genes near scaffold ends (potentially truncated)	94.63 %
% of genes from short scaffolds (< 2000 bps)	94.63 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Unclassified (61.074 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (18.121 % of family members)
Environment Ontology (ENVO)	Unclassified (75.839 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.221 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.03% β-sheet: 0.00% Coil/Unstructured: 57.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF00390	malic	65.10
PF03949	Malic_M	26.17
PF04972	BON	2.01
PF13793	Pribosyltran_N	0.67
PF03023	MurJ	0.67
PF00590	TP_methylase	0.67
PF01515	PTA_PTB	0.67
PF00005	ABC_tran	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0281	Malic enzyme	Energy production and conversion [C]	91.28
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	26.17
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	0.67
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	0.67
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	0.67
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	0.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
All Organisms	root	All Organisms	38.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
cellular organisms	root	All Organisms → cellular organisms	38.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	33.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	33.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	33.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.07 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2.01 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559017\|JCVI_READ_667384	Not Available	974	Open in IMG/M
3300000117\|DelMOWin2010_c10083504	Not Available	1234	Open in IMG/M
3300000179\|LPjun09P16500mDRAFT_c1016280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1211	Open in IMG/M
3300001117\|JGI11785J13272_1008982	Not Available	1313	Open in IMG/M
3300001353\|JGI20159J14440_10138422	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300001354\|JGI20155J14468_10144434	Not Available	768	Open in IMG/M
3300001355\|JGI20158J14315_10007092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	6766	Open in IMG/M
3300001769\|supr60_1011421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1826	Open in IMG/M
3300001936\|GOS2220_1016299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1639	Open in IMG/M
3300001964\|GOS2234_1000222	All Organisms → cellular organisms → Bacteria → Proteobacteria	1905	Open in IMG/M
3300001966\|GOS2245_1048932	Not Available	872	Open in IMG/M
3300002132\|M2t6BS2_1456365	Not Available	1705	Open in IMG/M
3300002138\|M3t6FKB1_1684873	Not Available	2104	Open in IMG/M
3300004279\|Ga0066605_10219312	Not Available	723	Open in IMG/M
3300005521\|Ga0066862_10261502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	564	Open in IMG/M
3300005522\|Ga0066861_10299098	Not Available	546	Open in IMG/M
3300005599\|Ga0066841_10062166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	611	Open in IMG/M
3300005606\|Ga0066835_10284906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	570	Open in IMG/M
3300005934\|Ga0066377_10170891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	665	Open in IMG/M
3300005934\|Ga0066377_10182472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	643	Open in IMG/M
3300005934\|Ga0066377_10244875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	554	Open in IMG/M
3300006308\|Ga0068470_1369695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1641	Open in IMG/M
3300006308\|Ga0068470_1595161	Not Available	600	Open in IMG/M
3300006313\|Ga0068472_10530602	Not Available	1167	Open in IMG/M
3300006329\|Ga0068486_1034288	Not Available	1584	Open in IMG/M
3300006331\|Ga0068488_1544355	Not Available	560	Open in IMG/M
3300006338\|Ga0068482_1319966	Not Available	1314	Open in IMG/M
3300006338\|Ga0068482_1497548	Not Available	833	Open in IMG/M
3300006340\|Ga0068503_10488646	Not Available	773	Open in IMG/M
3300006341\|Ga0068493_10673811	Not Available	1186	Open in IMG/M
3300006351\|Ga0099953_1039039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300006478\|Ga0100224_1069228	Not Available	803	Open in IMG/M
3300006478\|Ga0100224_1372018	Not Available	689	Open in IMG/M
3300007160\|Ga0099959_1141658	Not Available	1075	Open in IMG/M
3300007514\|Ga0105020_1141039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1757	Open in IMG/M
3300007515\|Ga0105021_1052635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2832	Open in IMG/M
3300007958\|Ga0105743_1040400	Not Available	536	Open in IMG/M
3300007981\|Ga0102904_1044641	Not Available	1008	Open in IMG/M
3300008097\|Ga0111541_10228733	Not Available	784	Open in IMG/M
3300008097\|Ga0111541_10391218	Not Available	603	Open in IMG/M
3300008223\|Ga0105348_1166224	Not Available	616	Open in IMG/M
3300008251\|Ga0105359_10536991	Not Available	518	Open in IMG/M
3300009000\|Ga0102960_1274710	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300009057\|Ga0102892_1007921	Not Available	1997	Open in IMG/M
3300009071\|Ga0115566_10220829	Not Available	1147	Open in IMG/M
3300009077\|Ga0115552_1387696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	552	Open in IMG/M
3300009103\|Ga0117901_1148583	Not Available	1311	Open in IMG/M
3300009108\|Ga0117920_1094909	Not Available	1234	Open in IMG/M
3300009173\|Ga0114996_10522683	Not Available	892	Open in IMG/M
3300009376\|Ga0118722_1031711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4609	Open in IMG/M
3300009376\|Ga0118722_1131088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1645	Open in IMG/M
3300009420\|Ga0114994_10421775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	882	Open in IMG/M
3300009420\|Ga0114994_10831933	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300009438\|Ga0115559_1177373	Not Available	779	Open in IMG/M
3300009438\|Ga0115559_1350688	Not Available	514	Open in IMG/M
3300009443\|Ga0115557_1250461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	678	Open in IMG/M
3300009449\|Ga0115558_1335076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	597	Open in IMG/M
3300009451\|Ga0127402_1010723	Not Available	2459	Open in IMG/M
3300009481\|Ga0114932_10251867	Not Available	1065	Open in IMG/M
3300009481\|Ga0114932_10913512	Not Available	506	Open in IMG/M
3300009497\|Ga0115569_10412450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	581	Open in IMG/M
3300009544\|Ga0115006_11073602	Not Available	716	Open in IMG/M
3300009703\|Ga0114933_10064917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2629	Open in IMG/M
3300009703\|Ga0114933_10865437	Not Available	574	Open in IMG/M
3300010883\|Ga0133547_11816078	Not Available	1126	Open in IMG/M
3300011013\|Ga0114934_10329755	Not Available	685	Open in IMG/M
3300012919\|Ga0160422_10249249	Not Available	1084	Open in IMG/M
3300012919\|Ga0160422_10251229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1080	Open in IMG/M
3300012928\|Ga0163110_10375475	Not Available	1060	Open in IMG/M
3300012928\|Ga0163110_10682889	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300012928\|Ga0163110_10843469	Not Available	723	Open in IMG/M
3300012936\|Ga0163109_11001127	Not Available	610	Open in IMG/M
3300012950\|Ga0163108_10779552	Not Available	618	Open in IMG/M
3300012950\|Ga0163108_10868603	Not Available	583	Open in IMG/M
3300012952\|Ga0163180_10685813	Not Available	789	Open in IMG/M
3300012953\|Ga0163179_11172222	Not Available	678	Open in IMG/M
3300013115\|Ga0171651_1140196	Not Available	772	Open in IMG/M
3300017755\|Ga0181411_1038820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1492	Open in IMG/M
3300017762\|Ga0181422_1055139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1271	Open in IMG/M
3300017771\|Ga0181425_1258631	Not Available	537	Open in IMG/M
3300017776\|Ga0181394_1237969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	547	Open in IMG/M
3300017783\|Ga0181379_1085804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1165	Open in IMG/M
3300017786\|Ga0181424_10197920	Not Available	852	Open in IMG/M
3300018418\|Ga0181567_11040288	Not Available	510	Open in IMG/M
3300020174\|Ga0181603_10076243	Not Available	1626	Open in IMG/M
3300020175\|Ga0206124_10405340	Not Available	506	Open in IMG/M
3300020346\|Ga0211607_1114589	Not Available	530	Open in IMG/M
3300020370\|Ga0211672_10106377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	853	Open in IMG/M
3300020372\|Ga0211683_10140574	Not Available	777	Open in IMG/M
3300020372\|Ga0211683_10190002	Not Available	656	Open in IMG/M
3300020372\|Ga0211683_10197470	Not Available	641	Open in IMG/M
3300020376\|Ga0211682_10308535	Not Available	594	Open in IMG/M
3300020381\|Ga0211476_10248559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	616	Open in IMG/M
3300020382\|Ga0211686_10286297	Not Available	676	Open in IMG/M
3300020389\|Ga0211680_10148577	Not Available	932	Open in IMG/M
3300020392\|Ga0211666_10114030	Not Available	1079	Open in IMG/M
3300020393\|Ga0211618_10036593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1961	Open in IMG/M
3300020397\|Ga0211583_10366965	Not Available	511	Open in IMG/M
3300020400\|Ga0211636_10228273	Not Available	719	Open in IMG/M
3300020418\|Ga0211557_10138966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1170	Open in IMG/M
3300020420\|Ga0211580_10182362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	870	Open in IMG/M
3300020428\|Ga0211521_10317132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	691	Open in IMG/M
3300020433\|Ga0211565_10415588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	587	Open in IMG/M
3300020440\|Ga0211518_10436780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	599	Open in IMG/M
3300020457\|Ga0211643_10243437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	883	Open in IMG/M
3300020457\|Ga0211643_10556131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	563	Open in IMG/M
3300020460\|Ga0211486_10245620	Not Available	776	Open in IMG/M
3300020469\|Ga0211577_10755016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	565	Open in IMG/M
3300020476\|Ga0211715_10671898	Not Available	506	Open in IMG/M
3300022925\|Ga0255773_10267333	Not Available	720	Open in IMG/M
3300022927\|Ga0255769_10349362	Not Available	581	Open in IMG/M
3300023178\|Ga0255759_10698676	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10014939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5092	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10164169	Not Available	1061	Open in IMG/M
3300025602\|Ga0209361_1081366	Not Available	859	Open in IMG/M
3300025830\|Ga0209832_1170649	Not Available	627	Open in IMG/M
3300025870\|Ga0209666_1159016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1016	Open in IMG/M
3300025886\|Ga0209632_10131186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1409	Open in IMG/M
3300025886\|Ga0209632_10388038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	668	Open in IMG/M
3300025887\|Ga0208544_10342637	Not Available	571	Open in IMG/M
3300025894\|Ga0209335_10357397	Not Available	603	Open in IMG/M
3300025894\|Ga0209335_10425661	Not Available	527	Open in IMG/M
3300026086\|Ga0207964_1116057	Not Available	618	Open in IMG/M
3300026188\|Ga0208274_1127131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	566	Open in IMG/M
3300026204\|Ga0208521_1143903	Not Available	608	Open in IMG/M
3300026207\|Ga0208895_1082775	Not Available	879	Open in IMG/M
3300026209\|Ga0207989_1142210	Not Available	566	Open in IMG/M
3300026259\|Ga0208896_1200250	Not Available	504	Open in IMG/M
3300026264\|Ga0207991_1076149	Not Available	878	Open in IMG/M
3300027298\|Ga0208970_1004045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3381	Open in IMG/M
3300027685\|Ga0209554_1185490	Not Available	616	Open in IMG/M
3300027788\|Ga0209711_10454023	Not Available	512	Open in IMG/M
3300027801\|Ga0209091_10355601	Not Available	676	Open in IMG/M
3300027830\|Ga0209359_10412723	Not Available	624	Open in IMG/M
3300027906\|Ga0209404_10564178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	759	Open in IMG/M
3300028192\|Ga0257107_1094886	Not Available	894	Open in IMG/M
3300031519\|Ga0307488_10795226	Not Available	524	Open in IMG/M
3300031598\|Ga0308019_10332911	Not Available	558	Open in IMG/M
3300031659\|Ga0307986_10169957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	998	Open in IMG/M
3300031702\|Ga0307998_1278306	Not Available	537	Open in IMG/M
3300031757\|Ga0315328_10334440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	883	Open in IMG/M
3300031757\|Ga0315328_10635446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	607	Open in IMG/M
3300031774\|Ga0315331_11021591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	561	Open in IMG/M
3300031775\|Ga0315326_10779558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	597	Open in IMG/M
3300031785\|Ga0310343_11406850	Not Available	527	Open in IMG/M
3300032011\|Ga0315316_11220279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	603	Open in IMG/M
3300032278\|Ga0310345_10297403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1494	Open in IMG/M
3300032360\|Ga0315334_10962592	Not Available	739	Open in IMG/M
3300032820\|Ga0310342_101716214	Not Available	749	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.32%
Unclassified	Environmental → Aquatic → Unclassified	2.01%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.67%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	38.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified	20.13%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.41%
Coastal	Environmental → Aquatic → Marine → Coastal	6.71%
Pelagic	Environmental → Aquatic → Marine → Pelagic	6.04%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	5.37%
Strait	Environmental → Aquatic → Marine → Strait	4.03%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.36%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	2.01%
Inlet	Environmental → Aquatic → Marine → Inlet	1.34%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.67%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	23.49%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	20.13%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	8.72%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.71%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.71%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	6.04%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	6.04%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	5.37%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	4.03%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.36%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	2.01%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.34%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.34%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.67%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	18.12%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	16.78%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	6.04%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	5.37%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	4.70%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.70%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.03%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	4.03%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.36%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.36%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	3.36%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.68%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	2.68%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.68%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.01%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.01%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.34%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.34%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.34%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	1.34%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	1.34%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.67%
Environmental And Host-Associated	Environmental → Aquatic → Marine → Oceanic → Unclassified → Environmental And Host-Associated	0.67%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.67%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.67%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.67%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.67%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.67%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.67%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.67%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559017	Marine microbial communities from the Atlantic Ocean, for comparison studies - Ocean5 (GOS 4441573)	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000179	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 500m	Environmental	Open in IMG/M
3300001117	Marine microbial communities from the Deep Pacific Ocean - MP2098	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300001769	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Background Supr60	Environmental	Open in IMG/M
3300001936	Marine microbial communities from Halifax, Nova Scotia, Canada - GS004	Environmental	Open in IMG/M
3300001964	Marine microbial communities from Rosario Bank, Honduras - GS018	Environmental	Open in IMG/M
3300001966	Marine microbial communities from Roca Redonda, Equador - GS030	Environmental	Open in IMG/M
3300002132	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t6BS2 (105f)	Environmental	Open in IMG/M
3300002138	M3t6FKB1 (102f)	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300005599	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF91A	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006329	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006351	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0045m	Environmental	Open in IMG/M
3300006478	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0125m	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007515	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300007958	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459BC_3.0um	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300008223	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN8C Hudson Canyon	Environmental	Open in IMG/M
3300008251	Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM8C Gulf of Mexico	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009057	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-3	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009103	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um	Environmental	Open in IMG/M
3300009108	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009376	Combined Assembly of Gp0137079, Gp0137080	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009451	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 8m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300013115	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020346	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556057-ERR599069)	Environmental	Open in IMG/M
3300020370	Marine microbial communities from Tara Oceans - TARA_B100001029 (ERX556065-ERR599079)	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020418	Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020460	Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020476	Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300025602	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_200m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025830	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025887	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026086	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026204	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47 (SPAdes)	Environmental	Open in IMG/M
3300026207	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82 (SPAdes)	Environmental	Open in IMG/M
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026264	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275 (SPAdes)	Environmental	Open in IMG/M
3300027298	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_35 (SPAdes)	Environmental	Open in IMG/M
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ocean5-_01323270	2166559017	Environmental And Host-Associated	MNAALKVPSAKSRLKVLGNLKATKKASAKIEAPKKIAINMSLK
DelMOWin2010_100835042	3300000117	Marine	ANSLLKVFGILKATKKASAKKLVPRKIAIKISLK*
LPjun09P16500mDRAFT_10162801	3300000179	Marine	PSANNLLKVLGSLKATKKASAKKLVPKKIAINMSLT*
JGI11785J13272_10089821	3300001117	Deep Ocean	IKAALNVPSANNLLNVLGNLKATKKASAKRLVPKKIAINISLA*
JGI20159J14440_101384222	3300001353	Pelagic Marine	GTKAALKVPSANNLLKVLGILNATKKASAKKPAPRKIAINISLK*
JGI20155J14468_101444341	3300001354	Pelagic Marine	LKVPSANNLLKVLGILNATKKASAKKPAPRNIAINISLK*
JGI20158J14315_100070928	3300001355	Pelagic Marine	ANNLLKVFGNLKATKKASAKIDAPRNIAIKISLT*
supr60_10114212	3300001769	Hydrothermal Vent Plume	AALNAPSANNLLKVLGSLKATKKASAKRPVPKKIAINMSLT*
GOS2220_10162991	3300001936	Marine	AALNVPSENNLLNVLGILNATKKASAKGPAPRKIAISISLT*
GOS2234_10002221	3300001964	Marine	AALKVPSANRRLKVLGSLNATKKASAKIDAPRKKAIKISLR*
GOS2245_10489321	3300001966	Marine	KVPSANNLLKVFGILNATKKASANIPVPRKIAIKISLK*
M2t6BS2_14563652	3300002132	Marine	ALKVPSENNLLKVLGILNATKKASAKNPVPRKIAIKISLK*
M3t6FKB1_16848732	3300002138	Marine	TNAELKDPSANNLRNVLGNLKATKKASAKKLVPRKIAIKISRK*
Ga0066605_102193122	3300004279	Marine	ALKVPSANNLLKVLGSLKATKKASANIDAPKKKAIKISLK*
Ga0066862_102615021	3300005521	Marine	NVPSENNLLKVFGILKATKNASAKGPAPRNIAINISLK*
Ga0066861_102990982	3300005522	Marine	LGTKAALKVPSENNLLNVFGILNATKKASASGPDPRNMAIKISLK*
Ga0066841_100621661	3300005599	Marine	NVPSANKRLNVFGSLKATKNASAKIDAPKNIAINISLR*
Ga0066835_102849062	3300005606	Marine	ANKRLKVFGSLKATKKASAKIDAPKKIAIKISLK*
Ga0066377_101708911	3300005934	Marine	INAALKVPSANRRLKVFGSLKATKKASAKIEAPRKMAIKISLK*
Ga0066377_101824722	3300005934	Marine	AALNVPSANRRLKVFGSLKATKKASEKIDAPKKVAIKISLK*
Ga0066377_102448751	3300005934	Marine	PSAKSLLKVFGSLNATKKASANIDVPKKKAIKISLK*
Ga0068470_13696952	3300006308	Marine	MKAALNVPSANSLLNVFGSLNATKKASAKRPVPKKIAINISLT*
Ga0068470_15951611	3300006308	Marine	AALNDPSENNLLNVLGILKATKKASAKGPDPRKIAIKISLI*
Ga0068472_105306022	3300006313	Marine	ENNLLKVLGILKATKKASANKPDPRNIAIRISLI*
Ga0068486_10342881	3300006329	Marine	LGTKAALKVPSENNLLNVFGILNATKKASANIPVPRKIAIKISLK*
Ga0068488_15443552	3300006331	Marine	LNAPSANNLLKVFGSLKATKKTSAKRLVPKKIAINMSLT*
Ga0068482_13199662	3300006338	Marine	MKAALNVPSANYRLNVLGSLNATKKASAKRLVPRKIAINISLT*
Ga0068482_14975481	3300006338	Marine	LNAPSANNLLNVLGNLKATKKASAKRLVPKKIAIKMSRT*
Ga0068503_104886462	3300006340	Marine	MKAALNAPSANNLLNVLGNLKATKKASAKRPVPKKIAINISLT*
Ga0068493_106738112	3300006341	Marine	MKAALNVPSANNRLNVFGSLNATKKASAKRLVPRKIAIYISLT*
Ga0099953_10390391	3300006351	Marine	IGINAALNVPSANNRLNVFGNRKATKNASANDDVPIKIAMSMSLK*
Ga0100224_10692282	3300006478	Marine	LGINAALNVPSANKRLNVFGSLKATKNASAKIDAPKNIAINISLR*
Ga0100224_13720182	3300006478	Marine	NKAALKVPSANNLLNVFGNLKATKKASAKRLVPKKIAIKISRT*
Ga0099959_11416582	3300007160	Marine	LGINAALNAPSANNLLKVLGNLKATKKASAKRLVPKKIAINMSLT*
Ga0105020_11410391	3300007514	Marine	LGIKAALNVPSANNLLNVLGSLKATKKASAKRLVPKKIAINISLT*
Ga0105021_10526351	3300007515	Marine	ANNLLKVFGNLKATKKASAKRPVPKKIAIKMSLT*
Ga0105743_10404002	3300007958	Estuary Water	LGTKAALNVPSENNLLKVLGILNATKKASARTPVPRNTAIKISLI*
Ga0102904_10446411	3300007981	Estuarine	LGTKAALNVPSKNNLLKVLGILNATKKASARTPVPRNTAIKISLI*
Ga0111541_102287332	3300008097	Marine	LKVPSENNLLKVFGILKATKKASAKGPEPRYIAMKKSLM*
Ga0111541_103912181	3300008097	Marine	TKAALKVPSENNLLKVFGILNATKNASAKTPVPRKTAIRISLK*
Ga0105348_11662242	3300008223	Methane Seep Mesocosm	LNVPSENNLLNVLGILKATKKASANGPAPRKIAINISLM*
Ga0105359_105369912	3300008251	Methane Seep Mesocosm	PSANNLLKVLGSLKATKKASARKLVPKKIAINMSLT*
Ga0102960_12747102	3300009000	Pond Water	ANNLLKVLGSLNAKKNASAKKLVPRNIAIKISRK*
Ga0102892_10079212	3300009057	Estuarine	KAALNVPSENNLLNVLGILNATKKASARTPVPRNTAIKISLI*
Ga0115566_102208291	3300009071	Pelagic Marine	INAALKVPSANSRLKVLGSLKATKKASANIDAPKKKLLKYP*
Ga0115552_13876961	3300009077	Pelagic Marine	NAALKVPSANNLLNVLGSLNATKKASANIDAPKKKAIKISLR*
Ga0117901_11485831	3300009103	Marine	LGMNAALNVPSANNLLNVLGNLKATKKASAKRLVPKKIAIKISLT*
Ga0117920_10949092	3300009108	Marine	ALNVPSANNLLNVLGSLNATKKASARMLVPKKIAIKMSLT*
Ga0114996_105226831	3300009173	Marine	IKAALNVPSANNLLKVFGNLKATKKASAKRLVPKKIAINISLA*
Ga0118722_10317111	3300009376	Marine	LGINAALKVPSANNRLNVLGNLKATKKASAKRLVPKKIAIRISRT*
Ga0118722_11310882	3300009376	Marine	GMKAALNVPSANNLLKVLGNLKATKKASAKKLVPKKIAINMSLT*
Ga0114994_104217752	3300009420	Marine	NAALKAPSANNLLNVLGNLKATKKASAKIDAPRKKAIRISLR*
Ga0114994_108319332	3300009420	Marine	ELKEPSANNLLKVLGNLKATKKASARKLVPRNIAIKISLK*
Ga0115559_11773731	3300009438	Pelagic Marine	KVPSENSLLNVFGILKATKKASAKKLVPRKIAIKISLK*
Ga0115559_13506882	3300009438	Pelagic Marine	AALKVPSANNLLKVLGNLKATKNASAKIEAPRKIAIKISLT*
Ga0115557_12504611	3300009443	Pelagic Marine	SANKRLNVFGSLNATKNASAKIDAPKNVAINISLR*
Ga0115558_13350761	3300009449	Pelagic Marine	KVPSANNLLNVFGSLKATKNASAKIDAPRKKAIRISLR*
Ga0127402_10107231	3300009451	Meromictic Pond	GTNAELKEPSANNLLKVLGNLNATKKASAKKLVPRNIAIKISLK*
Ga0114932_102518672	3300009481	Deep Subsurface	SANNLLKVFGSLKATKKASAKIEVPKKIAIKTSLT*
Ga0114932_109135122	3300009481	Deep Subsurface	GINAALKVPSANSLLNVLGSLKATKKASAKRLVPKKIAIKMSRT*
Ga0115569_104124502	3300009497	Pelagic Marine	AALKVPSANNLLNVLGNLKATKKASANIDAPRKNAIKISLR*
Ga0115006_110736021	3300009544	Marine	KAALNTPSAKSLLKVLGSLNATKKASAYIDAPKKIAIKMSLM*
Ga0114933_100649173	3300009703	Deep Subsurface	ANSLLNVFGNLNATKKASAKREVPKKIAIKISLT*
Ga0114933_108654371	3300009703	Deep Subsurface	PSENNLLKVFGILKATKKTSANKLVPRNIAIKMSLK*
Ga0133547_118160781	3300010883	Marine	SENSLLKVLGILNATKKASASGPVPRNTAINISLK*
Ga0114934_103297551	3300011013	Deep Subsurface	VPSENNLLNVLGILKATKKASAKGPEPRKIAIKISLI*
Ga0160422_102492491	3300012919	Seawater	ENNLLNVFGILKATKNASVTGPDPRFKAIKKSLR*
Ga0160422_102512292	3300012919	Seawater	NAALKVPSAKSRLKVLGNLKATKKASANIEAPKNIAINMSLK*
Ga0163110_103754752	3300012928	Surface Seawater	MNAALKVPSENSLLKVLGILNATKNASAIGPDPNVIAIRKSLI*
Ga0163110_106828891	3300012928	Surface Seawater	LGIKAALNVPSAKSRLKVFGNLKATKKASANIDAPKKKAIKISLK*
Ga0163110_108434692	3300012928	Surface Seawater	GTKAALKVPSENNLLKVFGILNATKKTSARRPVPRNIAIKISLR*
Ga0163109_110011271	3300012936	Surface Seawater	MNAALKVPSANNLLNVFGNLNATKKASAKIDAPKKIAIKISLT*
Ga0163108_107795522	3300012950	Seawater	AALKVPSANNLLKVLGNLKATKKTSAKKLVPRKIAINMSLT*
Ga0163108_108686031	3300012950	Seawater	VPSANNLLKVLGNLKATKKTSAKKLVPKKIAINMSLT*
Ga0163180_106858131	3300012952	Seawater	NVPSEKSLLNVLGILKATKKISARKPVPKKMAIKKSLK*
Ga0163179_111722221	3300012953	Seawater	NAALKVPSENNLLKVLGILNATKKTSAKAPVPRNIAINISLR*
Ga0171651_11401962	3300013115	Marine	ALNVPSANKRLNVFGSLKATKNASAKIDAPKNIAINISLK*
Ga0181411_10388201	3300017755	Seawater	AALNVPSANNRLKVFGNLNATKKASAKIDAPRNIAIKISLT
Ga0181422_10551392	3300017762	Seawater	GINAALKVPSENNLLNVLGSLNATKKASADIDAPRKNAIKISLR
Ga0181425_12586311	3300017771	Seawater	TKAALKVPSANSLLNVFGILKATKKASAKKLVPRKIAISTSLK
Ga0181394_12379691	3300017776	Seawater	LGMKAALNVPSANNLLNVFGILKATKKASAKIEAPRKIDIKISRR
Ga0181379_10858041	3300017783	Seawater	VFLLANNDEXLGTNAALKVPSENNLLNVLGILNATKKASAKTEAPKNTAIKISLR
Ga0181424_101979201	3300017786	Seawater	KRVERKNNLLKVFGILNATKNASASNPVPRKIAIKISLK
Ga0181567_110402882	3300018418	Salt Marsh	SENSLLKVFGILNATKKASAKKLVPRKIAIKISLK
Ga0181603_100762432	3300020174	Salt Marsh	KVPSANNLLKVFGILNATKKASANVPVPRKIAIKISLK
Ga0206124_104053402	3300020175	Seawater	KVPSANNLLKVFGNLKATKKASAKIDAPRKIAIKMSLM
Ga0211607_11145891	3300020346	Marine	MKAELKVPSENNLLKVLGILNATKNASAIGPDPNVIAIRKSLIYPRILLRKV
Ga0211672_101063772	3300020370	Marine	VPSANSLLKVLGSLKATKNASAKIEAPKNIAINISLR
Ga0211683_101405741	3300020372	Marine	GTNAALNVPSENNRLNVFGILNATKKASANGPAPRNTAINISLT
Ga0211683_101900022	3300020372	Marine	KAALNVPSENNLLKVLGILNATKKASARTPVPRNTAIKISLK
Ga0211683_101974701	3300020372	Marine	VPSENNLLNVLGILNATKNASAKGPAPRNTAISISLT
Ga0211682_103085352	3300020376	Marine	AALNVPSENSLLNVFGILNATKKASAKGPAPRNIAISMSLT
Ga0211476_102485591	3300020381	Marine	ALKVPSANRRLKVLGSLNATKKASAKTEAPKKMAIKMSLM
Ga0211686_102862971	3300020382	Marine	IKAALNTPSAKSLLKVLGRRKATKKASAYIDAPKKNAIKISLR
Ga0211680_101485771	3300020389	Marine	LGTKAALNVPSENNLLNVLGILKATKKASARGPEPRKIAIKISLI
Ga0211666_101140301	3300020392	Marine	LGIKAALKVPSANNLLKVFGNLKATKKASANIEAPKKKAIKISLM
Ga0211618_100365931	3300020393	Marine	KVPSANKRLKVLGNLNATKKASAKIDAPKKMAIKMSLK
Ga0211583_103669651	3300020397	Marine	MNAALKVPSENSLLKVLGILNATKNASAIGPDPNVIAIRKSLI
Ga0211636_102282731	3300020400	Marine	MKAALKVPSANKRLKVFGSLKATKNASAKMEAPRKIAIKISLK
Ga0211557_101389662	3300020418	Marine	KVPSANKRLKVFGSLKATKKASAKIDAPKKIAIKISLK
Ga0211580_101823621	3300020420	Marine	AALNVPSANNRLKVFGSLNATKKASAKIDVPRNIAIKISLT
Ga0211521_103171322	3300020428	Marine	ALNVPSANNRLNVLGSLNATKNASAKIDAPKNIAISISLR
Ga0211565_104155882	3300020433	Marine	KAALNVPSANKRLNVFGSLKATKKASAKIDAPKKMAIRISLR
Ga0211518_104367802	3300020440	Marine	DGTNAALKVPSENNLLKVFGILKATKKASAKGPEPRYIAMKKSLM
Ga0211643_102434371	3300020457	Marine	SANKRLNVFGIRKATKKASAKIDAPKNIAINISLR
Ga0211643_105561312	3300020457	Marine	GMNAALNVPSANNRLKVFGNLNATKKASAKIDAPRNIAIKISRR
Ga0211486_102456202	3300020460	Marine	AALKVPSANNRLKVFGILNATKKASAKIDAPKNIAINISLR
Ga0211577_107550161	3300020469	Marine	IKAALKVPSAKSRLNVLGSLNATKKASAKMDAPKKTAINISLT
Ga0211715_106718981	3300020476	Marine	NAALKVPSENNLLNVFGILKATKNASANGPEPKNIAIKISLI
Ga0255773_102673332	3300022925	Salt Marsh	SANNLLKVFGILNATKKASANIPVPRKIAIKISLK
Ga0255769_103493622	3300022927	Salt Marsh	MGTKAALKVPSANNLLKVFGSLKATKKASAMAVVPIKTAINMSLK
Ga0255759_106986762	3300023178	Salt Marsh	ELKDPSANSLRKVFGRRKATKKASAKKLVPTKKAIRISLK
(restricted) Ga0233438_100149391	3300024255	Seawater	VPSANNLLNVLGSLNATKKASANIDAPRKNAIKISLR
(restricted) Ga0233444_101641692	3300024264	Seawater	KAALKVPSENNLLKVFGNLKATKNASAKIDAPRNMAIKISLT
Ga0209361_10813662	3300025602	Marine	SENNLLKVLGILNATKKASAKIPVPRNTAIKISLK
Ga0209832_11706492	3300025830	Pelagic Marine	LNVPSEKSLLKVFGILNATKKASAIGPVPRNIAINISLT
Ga0209666_11590162	3300025870	Marine	PSANNLLNVLGSLNATKKASANIDAPRKNAIKISLR
Ga0209632_101311861	3300025886	Pelagic Marine	SAKSRLNVLGSLNATKKASAKMDAPKKTAINISLA
Ga0209632_103880382	3300025886	Pelagic Marine	SANNLLNVLGNLKATKKASANIDAPRKNAIKISLR
Ga0208544_103426371	3300025887	Aqueous	LNVPSENNLLKVLGILNATKKASAKIPVPRNTAIKISLK
Ga0209335_103573972	3300025894	Pelagic Marine	KAALNVPSENNLLNVLGILNATKKTSAKTPVPRNIAIRKSLM
Ga0209335_104256612	3300025894	Pelagic Marine	NVPSENNLLNVFGNLNATKKASAKMLVPKKIAIKISLI
Ga0207964_11160571	3300026086	Marine	LGIKAALNAPSANNLLKVLGNLKATKKASAKKLVPKKIAINMSLT
Ga0208274_11271312	3300026188	Marine	GMNAALNVPSANNLLKVFGNLKATKKASAKRLVPKKIAIKMSLT
Ga0208521_11439032	3300026204	Marine	ALNVPSANNLLNVLGNLKATKKASAKRLVPKKIAINISLA
Ga0208895_10827751	3300026207	Marine	VPSENNLLNVLGILKATKKASANGPAPRNIAISISLT
Ga0207989_11422101	3300026209	Marine	GIKAALNVPSANNLLNVFGSLNATKKASAKRLVPRKIAINISLI
Ga0208896_12002501	3300026259	Marine	VPSANNLLKVFGSLKATKKASAKRLVPKKIAIKMSLT
Ga0207991_10761491	3300026264	Marine	AALNVPSANNLLKVLGNLKATKKASAKKLVPKKIAINISLT
Ga0208970_10040454	3300027298	Marine	AALNVPSENNRLNVFGILNATKKASANGPAPRNTAINMSLT
Ga0209554_11854902	3300027685	Marine	LGIKAALNAPSANNLLKVLGSLKATKKASAKRPVPKKIAINMSLT
Ga0209711_104540232	3300027788	Marine	AALKVPSENNLLNVFGILNATKKASAKTPVPRKTAIRISLI
Ga0209091_103556011	3300027801	Marine	AALNVPSENNRLNVFGILNATKKASASGPAPRNTAINMSLT
Ga0209359_104127231	3300027830	Marine	GTNAALKVPSENNLLKVFGILNATKKASAKKPVPRNIAIRMSLK
Ga0209404_105641782	3300027906	Marine	KAALNVPSANKRLNVFGSLKATKKASAKIDAPKNIAINISLR
Ga0257107_10948862	3300028192	Marine	ALNVPSENNLLNVLGILKATKKASAKGPDPRKIAIKISLI
Ga0307488_107952262	3300031519	Sackhole Brine	NAALKVPSENNLLKVLGILNATKKASAKSPVPRKIAIKISLI
Ga0308019_103329112	3300031598	Marine	LNVPSENNLLNVLGILNATKKASARTPVPRNTAIKISLK
Ga0307986_101699571	3300031659	Marine	ALNVPSANKRRNVFGSLKATKNASAKTDAPKNIAINISLR
Ga0307998_12783061	3300031702	Marine	NAALNVPSEKSLLNVFGILNATKKASAKGPAPRNIAISMSLT
Ga0315328_103344402	3300031757	Seawater	NVPSANKRLNVFGSLKATKNASAKIDAPKNIAINISLK
Ga0315328_106354462	3300031757	Seawater	LNVPSENNLLNVLGILKATKKASANGPAPRKIAISISLT
Ga0315331_110215912	3300031774	Seawater	TKAALNVPSENNLLNVLGILKATKKASANGPAPRKIAISISLT
Ga0315326_107795582	3300031775	Seawater	LNAPSENNLRNVLGILNATKKASAIGPDPRNIAINMSLI
Ga0310343_114068501	3300031785	Seawater	LGMKAALKVPSANKRLNVFGSLKATKKASANIDAPKKIAINISLR
Ga0315316_112202792	3300032011	Seawater	GTKAALNVPSENNLLKVFGILKATKNASAKGPAPRNIAINISLK
Ga0310345_102974031	3300032278	Seawater	KAALNVPSENNLLNVFGILKATKNASANGPEPRNIAINISLI
Ga0315334_109625922	3300032360	Seawater	LGTKAALNVPSENNLLNVLGILKATKKASANGPAPRKIAIKISLI
Ga0310342_1017162142	3300032820	Seawater	LGINAALKAPSANNLLNVFGSLNATKKASAKRLVPKKIAIKMSRT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters