Metagenome / Metatranscriptome Family F046519

Basic Information
Family ID	F046519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	43 residues
Representative Sequence	VTSGELAESPGGTGVSGPISESEVASDALSVVGRLNGT
Number of Associated Samples	140
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.26 %
% of genes near scaffold ends (potentially truncated)	84.77 %
% of genes from short scaffolds (< 2000 bps)	89.40 %
Associated GOLD sequencing projects	136
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Bacteria (67.550 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.179 % of family members)
Environment Ontology (ENVO)	Unclassified (24.503 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.682 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.73% β-sheet: 0.00% Coil/Unstructured: 77.27%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF00078	RVT_1	25.17
PF08388	GIIM	5.30
PF13181	TPR_8	1.32
PF01548	DEDD_Tnp_IS110	0.66
PF00239	Resolvase	0.66
PF11867	DUF3387	0.66
PF01432	Peptidase_M3	0.66
PF04773	FecR	0.66
PF02371	Transposase_20	0.66
PF13603	tRNA-synt_1_2	0.66
PF00583	Acetyltransf_1	0.66
PF07676	PD40	0.66
PF01035	DNA_binding_1	0.66
PF00069	Pkinase	0.66
PF01243	Putative_PNPOx	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.65
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.32
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.66
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.66
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.66
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.66
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.66

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.55 %
Unclassified	root	N/A	32.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.55 %
Unclassified	root	N/A	32.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.55 %
Unclassified	root	N/A	32.45 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.10 %
Unclassified	root	N/A	32.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12.58 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	11.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	11.92 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	5.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	12.58 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	11.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.92 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	5.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.45 %
Deltaproteobacteria bacterium RBG_13_52_11b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	11.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.92 %
Thiocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa	5.30 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	2.65 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.66 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.45 %
Deltaproteobacteria bacterium RBG_13_52_11b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	11.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.92 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	5.30 %
Paraburkholderia mimosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia mimosarum	0.66 %
unclassified Paraburkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia	0.66 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	0.66 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.45 %
Deltaproteobacteria bacterium RBG_13_52_11b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	11.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.92 %
Thiocapsa marina 5811	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	5.30 %
Paraburkholderia sp. BL23I1N1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	0.66 %
Cupriavidus sp. P-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. P-10	0.66 %
Paraburkholderia mimosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia mimosarum	0.66 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.66 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1013297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1323	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10134056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	601	Open in IMG/M
3300001086\|JGI12709J13192_1012109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300001166\|JGI12694J13545_1018780	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300001356\|JGI12269J14319_10084856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1649	Open in IMG/M
3300001686\|C688J18823_10031060	All Organisms → cellular organisms → Bacteria	3652	Open in IMG/M
3300001867\|JGI12627J18819_10327777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	618	Open in IMG/M
3300002023\|plot21A_1016703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	503	Open in IMG/M
3300002245\|JGIcombinedJ26739_100250062	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300002245\|JGIcombinedJ26739_100354796	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300002914\|JGI25617J43924_10164354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	751	Open in IMG/M
3300002917\|JGI25616J43925_10288182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	612	Open in IMG/M
3300004137\|Ga0058883_1560485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	538	Open in IMG/M
3300004605\|Ga0068952_1306660	Not Available	639	Open in IMG/M
3300004618\|Ga0068963_1317117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300004633\|Ga0066395_10009501	All Organisms → cellular organisms → Bacteria	3552	Open in IMG/M
3300004969\|Ga0072327_1261494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	520	Open in IMG/M
3300005093\|Ga0062594_101292717	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	731	Open in IMG/M
3300005180\|Ga0066685_10734304	Not Available	675	Open in IMG/M
3300005204\|Ga0068997_10080716	Not Available	676	Open in IMG/M
3300005293\|Ga0065715_10201304	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300005327\|Ga0070658_10663822	Not Available	905	Open in IMG/M
3300005334\|Ga0068869_101405839	Not Available	618	Open in IMG/M
3300005435\|Ga0070714_100151483	Not Available	2090	Open in IMG/M
3300005436\|Ga0070713_100995342	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005445\|Ga0070708_101001656	Not Available	783	Open in IMG/M
3300005454\|Ga0066687_10684691	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005466\|Ga0070685_10884121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	664	Open in IMG/M
3300005468\|Ga0070707_101201212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	724	Open in IMG/M
3300005471\|Ga0070698_100159847	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300005538\|Ga0070731_10703022	Not Available	672	Open in IMG/M
3300005542\|Ga0070732_10414882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	813	Open in IMG/M
3300005557\|Ga0066704_10642664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	676	Open in IMG/M
3300005602\|Ga0070762_10031852	All Organisms → cellular organisms → Bacteria → Proteobacteria	2826	Open in IMG/M
3300005764\|Ga0066903_100664337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1826	Open in IMG/M
3300005833\|Ga0074472_10113728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	615	Open in IMG/M
3300005921\|Ga0070766_10092620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1777	Open in IMG/M
3300006052\|Ga0075029_101235060	Not Available	523	Open in IMG/M
3300006059\|Ga0075017_100972015	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300006175\|Ga0070712_100708809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	858	Open in IMG/M
3300006354\|Ga0075021_11123004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia mimosarum	515	Open in IMG/M
3300006423\|Ga0075039_1336083	Not Available	989	Open in IMG/M
3300006796\|Ga0066665_11193525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	580	Open in IMG/M
3300009012\|Ga0066710_100908110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300009029\|Ga0066793_10171133	Not Available	1266	Open in IMG/M
3300009089\|Ga0099828_10068450	All Organisms → cellular organisms → Bacteria	2999	Open in IMG/M
3300010325\|Ga0134064_10154555	Not Available	796	Open in IMG/M
3300010366\|Ga0126379_11396678	Not Available	806	Open in IMG/M
3300010366\|Ga0126379_13717873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300010376\|Ga0126381_100282418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	2265	Open in IMG/M
3300010403\|Ga0134123_11363928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	747	Open in IMG/M
3300011003\|Ga0138514_100060739	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300011271\|Ga0137393_10213480	Not Available	1631	Open in IMG/M
3300011271\|Ga0137393_11084546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	681	Open in IMG/M
3300012096\|Ga0137389_10172693	Not Available	1785	Open in IMG/M
3300012096\|Ga0137389_11498017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	570	Open in IMG/M
3300012169\|Ga0153990_1030124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	1231	Open in IMG/M
3300012189\|Ga0137388_10823844	Not Available	860	Open in IMG/M
3300012199\|Ga0137383_10236171	Not Available	1340	Open in IMG/M
3300012363\|Ga0137390_10144110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	2365	Open in IMG/M
3300012923\|Ga0137359_10215060	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300012929\|Ga0137404_12329807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	501	Open in IMG/M
3300012948\|Ga0126375_11297509	Not Available	611	Open in IMG/M
3300014151\|Ga0181539_1114326	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300014164\|Ga0181532_10251873	Not Available	1014	Open in IMG/M
3300014165\|Ga0181523_10253346	Not Available	1005	Open in IMG/M
3300014488\|Ga0182001_10685373	Not Available	508	Open in IMG/M
3300014501\|Ga0182024_10301942	Not Available	2116	Open in IMG/M
3300014839\|Ga0182027_10147420	Not Available	2774	Open in IMG/M
3300015242\|Ga0137412_10228151	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300016294\|Ga0182041_11393119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	643	Open in IMG/M
3300016341\|Ga0182035_12088124	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300016371\|Ga0182034_11833235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	535	Open in IMG/M
3300016698\|Ga0181503_1334698	Not Available	798	Open in IMG/M
3300017657\|Ga0134074_1355745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300017933\|Ga0187801_10008746	All Organisms → cellular organisms → Bacteria	3280	Open in IMG/M
3300017934\|Ga0187803_10449175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300017939\|Ga0187775_10494772	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300017942\|Ga0187808_10607829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300017966\|Ga0187776_10325403	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300018057\|Ga0187858_10099703	Not Available	1985	Open in IMG/M
3300019361\|Ga0173482_10583887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	558	Open in IMG/M
3300020581\|Ga0210399_10921845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	707	Open in IMG/M
3300020583\|Ga0210401_11148374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300021479\|Ga0210410_10735979	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300021559\|Ga0210409_10726216	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300022523\|Ga0242663_1146200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300022734\|Ga0224571_113576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300023069\|Ga0247751_1087002	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300023255\|Ga0224547_1046256	Not Available	565	Open in IMG/M
3300024055\|Ga0247794_10321797	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	524	Open in IMG/M
3300025111\|Ga0208968_1101354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	874	Open in IMG/M
3300025481\|Ga0208079_1070768	Not Available	716	Open in IMG/M
3300026536\|Ga0209058_1366461	Not Available	500	Open in IMG/M
3300026551\|Ga0209648_10718713	Not Available	545	Open in IMG/M
3300026920\|Ga0208575_1010282	Not Available	895	Open in IMG/M
3300027019\|Ga0207857_1060231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300027548\|Ga0209523_1098617	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300027576\|Ga0209003_1055192	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300027610\|Ga0209528_1118570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	583	Open in IMG/M
3300027824\|Ga0209040_10193669	Not Available	1060	Open in IMG/M
3300027855\|Ga0209693_10166687	Not Available	1087	Open in IMG/M
3300027862\|Ga0209701_10062744	All Organisms → cellular organisms → Bacteria → Acidobacteria	2365	Open in IMG/M
3300027889\|Ga0209380_10475767	Not Available	730	Open in IMG/M
3300027911\|Ga0209698_10714154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	762	Open in IMG/M
3300029919\|Ga0302141_1225341	Not Available	510	Open in IMG/M
3300030629\|Ga0210268_1339333	Not Available	520	Open in IMG/M
3300030937\|Ga0138302_1077566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	522	Open in IMG/M
3300031545\|Ga0318541_10021506	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300031715\|Ga0307476_11017241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300031723\|Ga0318493_10342935	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031736\|Ga0318501_10247001	Not Available	943	Open in IMG/M
3300031736\|Ga0318501_10608373	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300031736\|Ga0318501_10823141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300031747\|Ga0318502_10881142	Not Available	544	Open in IMG/M
3300031770\|Ga0318521_10148842	All Organisms → cellular organisms → Bacteria → Acidobacteria	1328	Open in IMG/M
3300031771\|Ga0318546_10266690	Not Available	1181	Open in IMG/M
3300031771\|Ga0318546_11178210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	538	Open in IMG/M
3300031777\|Ga0318543_10194584	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	899	Open in IMG/M
3300031779\|Ga0318566_10067343	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300031796\|Ga0318576_10636255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300031797\|Ga0318550_10320103	Not Available	752	Open in IMG/M
3300031805\|Ga0318497_10210978	Not Available	1074	Open in IMG/M
3300031845\|Ga0318511_10626852	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031890\|Ga0306925_10630136	Not Available	1129	Open in IMG/M
3300031912\|Ga0306921_11423464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300031945\|Ga0310913_11310524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	502	Open in IMG/M
3300031947\|Ga0310909_10988310	Not Available	688	Open in IMG/M
3300031947\|Ga0310909_11659645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300031959\|Ga0318530_10038510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1753	Open in IMG/M
3300031981\|Ga0318531_10563202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	516	Open in IMG/M
3300032001\|Ga0306922_10808271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	980	Open in IMG/M
3300032039\|Ga0318559_10565444	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300032060\|Ga0318505_10605077	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300032076\|Ga0306924_10618541	Not Available	1224	Open in IMG/M
3300032076\|Ga0306924_12410382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	530	Open in IMG/M
3300032089\|Ga0318525_10084872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1602	Open in IMG/M
3300032090\|Ga0318518_10739400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300032091\|Ga0318577_10560532	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300032094\|Ga0318540_10158569	Not Available	1085	Open in IMG/M
3300032119\|Ga0316051_1018534	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	627	Open in IMG/M
3300032261\|Ga0306920_102695717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. P-10	679	Open in IMG/M
3300032783\|Ga0335079_10133953	All Organisms → cellular organisms → Bacteria → Acidobacteria	2790	Open in IMG/M
3300032783\|Ga0335079_10570468	Not Available	1197	Open in IMG/M
3300033289\|Ga0310914_10752758	Not Available	871	Open in IMG/M
3300033289\|Ga0310914_11888576	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300033887\|Ga0334790_074489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	1169	Open in IMG/M
3300034124\|Ga0370483_0129448	Not Available	842	Open in IMG/M
3300034163\|Ga0370515_0191138	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.69%
Host-Associated	Host-Associated	3.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.43%
Aquatic	Environmental → Aquatic	11.26%
Plants	Host-Associated → Plants	2.65%
Fungi	Host-Associated → Fungi	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.78%
Freshwater	Environmental → Aquatic → Freshwater	7.28%
Sediment	Environmental → Aquatic → Sediment	3.31%
Peat	Environmental → Terrestrial → Peat	1.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.32%
Marine	Environmental → Aquatic → Marine	0.66%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.66%
Mycelium	Host-Associated → Fungi → Mycelium	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.28%
Loam	Environmental → Terrestrial → Soil → Loam	17.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.99%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.66%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.66%
Clay	Environmental → Terrestrial → Soil → Clay	0.66%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.66%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.99%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.66%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Grasslands	Environmental → Terrestrial → Soil → Clay → Grasslands	0.66%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.66%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.99%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.32%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.32%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.32%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.66%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.66%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.66%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.66%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.66%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.66%
Switchgrass Rhizosphere And Bulk Soil	Environmental → Terrestrial → Soil → Clay → Grasslands → Switchgrass Rhizosphere And Bulk Soil	0.66%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.66%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.66%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.66%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001086	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002023	Switchgrass rhizosphere and bulk soil microbial communities from Knoxville, Tennessee, USA - plot21A	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004605	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004618	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004969	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 44 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006423	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_056 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016698	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025111	Groundwater microbial communities from Rifle, Colorado - Rifle Oxygen_injection A3 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10132972	3300000580	Forest Soil	MEEQCVTLGELAESPGGTGVSGPISESEVASEALSVVGRLHITYEAR*
AF_2010_repII_A1DRAFT_101340561	3300000597	Forest Soil	IHPPYQGVGGRHGXEEQRVTSGELAGSLGGTGVSRPIRESEVASDARSVVGRLKSTKEAW
JGI12709J13192_10121091	3300001086	Forest Soil	VTSGELAESSGGTGVNEPISRSEVGSDALSVVGRLNSTYEAW*
JGI12694J13545_10187802	3300001166	Forest Soil	QRVTSGELAESPGGTGVSEPISASKVVSDALSVVGLPDST*
JGI12269J14319_100848561	3300001356	Peatlands Soil	GTEEQRVTSGELTESPVGIGVSGPISASEMASDALSEVRRLNST*
C688J18823_100310606	3300001686	Soil	VTSGGLAGSPGGTGVSGPISESEVASDALAVDGRLCSTTSAVKAA*
JGI12627J18819_103277771	3300001867	Forest Soil	VTSGGLAESPGGTGVSRPISESEVASEAWSVVGRLNITYEA
plot21A_10167032	3300002023	Switchgrass Rhizosphere And Bulk Soil	EEQRVTSGELTGSPGGTGVSRPISGGEVASDALSVVGPLRGT*
JGIcombinedJ26739_1002500622	3300002245	Forest Soil	VTSGELAESPGGTGVSGPISESEVASDALSVVGRLNGTYE
JGIcombinedJ26739_1003547962	3300002245	Forest Soil	VTSGGLAESPSGIGVSRPISESEVASEALSVDGRLCSTTSAAKAA*
JGI25617J43924_101643541	3300002914	Grasslands Soil	EQCMTSGGLTESPGGTGVSGPISESERASDARSVVGRLNST*
JGI25616J43925_102881821	3300002917	Grasslands Soil	VTSGELAESPGGTGVSGPISESEVASDALSVVGRLNGTYEAW*
Ga0058883_15604852	3300004137	Forest Soil	VTSGELAESPGGTGVSGPISVSEVASDALSVVGQLKSTYEAW*
Ga0068952_13066601	3300004605	Peatlands Soil	RVTSGGLAESLGGTGVSRPISASEMASDARSVVGLPNST*
Ga0068963_13171172	3300004618	Peatlands Soil	VTSGELAGSAVGTGVSGPISESEKASDALSVVGRLHITYEAW*
Ga0066395_100095013	3300004633	Tropical Forest Soil	MEERRVTSGGLAESQGGTGVNGPISENEKASDALSVDGRLRSTTHAVKAA*
Ga0072327_12614942	3300004969	Peatlands Soil	RHGTEEQRVTSGGLTESPGGTGVSRPISDSEVASEARPVVGRLGST*
Ga0062594_1012927172	3300005093	Soil	VTSGGLAESPGGTGVSRPISESEVASNALSVDGRLCSTTSAVKAV*
Ga0066685_107343042	3300005180	Soil	RHGTEEQHVTSGELAESPGSTGVSRPISKSEVASHALSVVGLPNST*
Ga0068997_100807162	3300005204	Natural And Restored Wetlands	RVTSGGLAGPSGGTGVSRPISESEAASDTPPVDGRLCSTSSAVKAA*
Ga0065715_102013041	3300005293	Miscanthus Rhizosphere	VTSGELAESSGGTGVNEPISRGEVGSDALSVVGRLNSTYEAW*
Ga0070658_106638222	3300005327	Corn Rhizosphere	EQRVTSGGLTGFPGGAGKSRPISESDVASDALSVDGRLSSTTSAVKAA*
Ga0066388_1025057091	3300005332	Tropical Forest Soil	ESLGGTRVSRPISESERVQDALSVDGRLCSTRSAVKTAQPRNR*
Ga0068869_1014058392	3300005334	Miscanthus Rhizosphere	EEQRVTSGGLAESAGGTGVSRPISASEMASDALSVDGRLCSTTSAVKAA*
Ga0070714_1001514831	3300005435	Agricultural Soil	VTSGGLTESLGGTRVSGPISASEGASDALPVDGRLCSTTNAVKAV*
Ga0070713_1009953422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTSGELAESPGDTGVSEPISTSEVVSDALSVVGLLIVPEA*
Ga0070708_1010016561	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	HGTEEQRVTSGELAESPGGTGVSGPISGSERASDARSVVGLPNST*
Ga0066687_106846911	3300005454	Soil	EEQRVTSGELAESPSGIGVSGPISASKMASDALSVVGLPNST*
Ga0070685_108841212	3300005466	Switchgrass Rhizosphere	VTSGGLAESPGGTGVSGPISESEMASDVPSVDGRLCSTSSAVKAA*
Ga0070707_1012012122	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTSGELAESPGGTGVSGPISESEVASEALSVVGRLNITYEAW*
Ga0070698_1001598471	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EEQRVTSGELAESPGDTGVSEPISTSEVVSDALSVVGLLIVPEA*
Ga0070731_107030222	3300005538	Surface Soil	TSGGLAESPGGTGVSEPISESEMVSHAPSVVGLPHSI*
Ga0070732_104148821	3300005542	Surface Soil	MEEQRATSGDLAEFPGGTGISEPISENEVASDALSGVGRLRMTYEAW*
Ga0066704_106426641	3300005557	Soil	RHGTEEQRVTSGGLAESLVGTRVSRPISESERVSDALSVDGRLCSTRSAVKTEQPSNR*
Ga0070762_100318522	3300005602	Soil	VTSGELAESPGGTGVSGPISESEVASDALSVVGRPNGTYEAW*
Ga0066903_1006643371	3300005764	Tropical Forest Soil	EQCVTSGGLAESPGGTGVNGPISASEMASDAPSVVGLPHGVR*
Ga0074472_101137281	3300005833	Sediment (Intertidal)	VTSGGLAGSPVGTGVSRPISESEVASDAPPVDGRLCSTSSAVK
Ga0070766_100926202	3300005921	Soil	HGTEEQRVTSGELAGSPGGTGVSGPISESEVASDALSVVGRLNITYEAW*
Ga0075029_1012350601	3300006052	Watersheds	TEEQRVTSGELAESLGDTGVSEPISKSEVVSDALSVVGLPNST*
Ga0075017_1009720153	3300006059	Watersheds	VTSGELAESSGGTGVNEPISRSEVGSDALSVVGRLSS
Ga0070712_1007088093	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RHGTEEQRVTSGELAESPGGTGVSGPISVSEVASDALSVVGRLNSVC*
Ga0075021_111230041	3300006354	Watersheds	CGWHGTEEQRVTSGELAESSSDIGVSEPINKSEVVSDALSVVGLPNST*
Ga0075039_13360831	3300006423	Permafrost Soil	CVTSGGLAASSGGTGVSRPISEGEMASNALSVVGRLKSTRSMAKTM*
Ga0066665_111935251	3300006796	Soil	RVTSGELAESPGGTGVNEPISRGEKASDALSVVGRLNSTYETW*
Ga0066710_1009081103	3300009012	Grasslands Soil	GTEEQRVTSGELAESPGGTGVNEPISESEGASDARSVVGRLNST
Ga0066793_101711331	3300009029	Prmafrost Soil	EEQRVTSGELAESSGGTGANEPISESEAASDALSVVGRLNSTYEAW*
Ga0099828_100684501	3300009089	Vadose Zone Soil	TEEQRVTSGGLAESPGDTGVSGPISGSEMASDALSVVGLPNST*
Ga0134064_101545551	3300010325	Grasslands Soil	QEVLTESLGGTGVSRPISESEVASEALSVYGRLNST*
Ga0126379_113966782	3300010366	Tropical Forest Soil	GTEEQGVTSGGLAESPSGIGVSEAISVSETVSNALSVVGRLGSTASVAKVT*
Ga0126379_137178731	3300010366	Tropical Forest Soil	MEEQHVTSGELAESPGGAGVNGPISESEVASDALSVVRRLNSTYEAR*
Ga0126381_1002824183	3300010376	Tropical Forest Soil	VTSGGLAGSSDGIGVSELISESEVASKVLSVVGRLKSTRSLVKAK*
Ga0134123_113639281	3300010403	Terrestrial Soil	VTSGELAESSGGTGVNEPISRGEVGSDALSVVGRLNSTY
Ga0138514_1000607392	3300011003	Soil	VTSGELAESAGGTGESGPISESEVASDAPSVDGRL
Ga0137393_102134801	3300011271	Vadose Zone Soil	GELAESSGGTGVNEPISRSEVGSDALSVVGRLNSTYEAW*
Ga0137393_110845461	3300011271	Vadose Zone Soil	VTSGELAESSGGTGVNEPISRSEVGSDALSVVGRLNSTYEAW
Ga0137389_101726931	3300012096	Vadose Zone Soil	RVTSGELAESSGGTGVNEPISRSEVGSDALSVVGRLNSTYEAW*
Ga0137389_114980171	3300012096	Vadose Zone Soil	GTEEQRVTSGELAGSPSDTGVSEPISKSEVVSDALSVVGLPNST*
Ga0153990_10301241	3300012169	Attine Ant Fungus Gardens	MEEQCVTSGGLTQSPEGTGVSEPISASEMVSEAASVIGRPHSTSSAVKAA
Ga0137388_108238441	3300012189	Vadose Zone Soil	TEVQRVTSGELAKSPGGTGVSGSISGSEVASDALSVVGRLNST*
Ga0137383_102361711	3300012199	Vadose Zone Soil	RHGTEEQRVTSGELAESPGGTGVSGPISVSEVASDALSVVGRLNST*
Ga0137390_101441102	3300012363	Vadose Zone Soil	VTSGELAESSGGTGVNEPISRSEVGSDALSVVGRL
Ga0137359_102150601	3300012923	Vadose Zone Soil	EQRVTSGELAESSGGTGVNEPISESEAASDALSVVGRLSSTYEAR*
Ga0137404_123298071	3300012929	Vadose Zone Soil	VTSGELAESSGGTGVNEPISRSEVGSDALSVVGRLNS
Ga0126375_112975091	3300012948	Tropical Forest Soil	TEEQRVTSGELAGSLDETGVSEPISESEAASDALSVDGRLRSTASMTKVV*
Ga0181539_11143261	3300014151	Bog	RVTSGGLTESPGGTGVSEPISASEAGSDALAVVGRLNST*
Ga0181532_102518732	3300014164	Bog	EEQRVTSGELAESSGGTGVSRPISESEVASDALSVVGRLNTTYEAW*
Ga0181523_102533462	3300014165	Bog	VTSGELAESSGGTGVSRPISESEVASDALSVVGRLNTTYEAW*
Ga0182001_106853732	3300014488	Soil	GELAESLGGAGLSKPISASEMVRDALSVVGPLHIT*
Ga0182024_103019421	3300014501	Permafrost	EQRVTSGELAESPGGTGVSGPISRGEVASDALSVVGRLNST*
Ga0182027_101474204	3300014839	Fen	WHGTEEQRVTSGELTGSLGGAGASRPISESEVASDALSVDGRLCST*
Ga0137412_102281511	3300015242	Vadose Zone Soil	VTSGELAESSGGTGVNEPISRSEVGSDALSVVGRLNSTY
Ga0182041_113931191	3300016294	Soil	MEEQHVTSGELAEFPGGTGVNGPISESEVASDALSVVRRLNSTYEAAHLE
Ga0182035_120881242	3300016341	Soil	VTSGELAESPGGTGVSGPISVSEGASDALSVVGRLNSTYEM
Ga0182034_118332352	3300016371	Soil	MEERRVTSGGLVGSPGGTGVSKPISDSEVASDALSVDGRLCSTTSAA
Ga0181503_13346981	3300016698	Peatland	TEEQRVTSGGLAESLGGTRVSRPISESERVRDALSVDGRLCSTRSAVKTAQPRNR
Ga0134074_13557451	3300017657	Grasslands Soil	RVTSGGLAESPGGTGVSEPISGCERVSEVLSVVGRLNST
Ga0187801_100087463	3300017933	Freshwater Sediment	VTSGELAESPVGTGVSGPISESEVASEALPVVGRLHITYEAW
Ga0187803_104491751	3300017934	Freshwater Sediment	RHGTEEQRVTSGELAESPGGTGVSGPISRGEVASDALSVVGRLNSTYEAW
Ga0187775_104947721	3300017939	Tropical Peatland	VTSGELAESAGGTGVSGPISASEVASDALSVVGRLNSTYEAWRKPRD
Ga0187808_106078291	3300017942	Freshwater Sediment	HGTEEQRVTSGGLAESPGGTGVSRPISESEVASDALSVVGRLNST
Ga0187776_103254032	3300017966	Tropical Peatland	MEEQRVTSGELAKSADGNVVSKPISESEKASNALSVVGRLNSTLRRDESRVTG
Ga0187886_13281551	3300018018	Peatland	ESAGGTGVSRPISESEVASDALPVDGRLCSTTSAVKAA
Ga0187858_100997031	3300018057	Peatland	RVTSGELAESSGGTGVSRPISESEVASDALSVVGRLNITYEVW
Ga0173482_105838871	3300019361	Soil	MEEQCVTSGGLAESPVGTGVSRPISESEMASDALS
Ga0210399_109218451	3300020581	Soil	VTSGELAESPGGTGVSGPISESEVASDALSVVGRLNGT
Ga0210401_111483742	3300020583	Soil	GRHGTEEQRVTSGELAESSGGTEVSKPISESEVASDALSVVGRLNITYEAW
Ga0210410_107359791	3300021479	Soil	MEEQRVTSGGLIESSGGTGVSGPISTSEGASEARSVDG
Ga0210409_107262161	3300021559	Soil	VTSGGLAESAGGTGVSRPISKDEVASDALSVDGRLCSTTSA
Ga0242663_11462002	3300022523	Soil	AKSPGGTGVSGPISESEVASEALSVVGRLNSTYEAW
Ga0224571_1135762	3300022734	Rhizosphere	EVLAESPGGTGVSKPISGSEVASEALSVYGRLNST
Ga0247751_10870021	3300023069	Soil	VTSGGLAGSSGGTGVSRPISESEVASHALSVDGRLCSTTSAA
Ga0224547_10462561	3300023255	Soil	GGLTESLGGTRVSEPISKREVVSDALSVVGLPNST
Ga0247794_103217971	3300024055	Soil	MEEQCVTSGGLAESPVGTGVSRPISESEMASDALSVVGLPRSVR
Ga0208968_11013542	3300025111	Soil	VCGRHGMEEQCVTSGGLAQSLGGTGGSEPISASEMASGATPVVGRPRGT
Ga0208079_10707681	3300025481	Arctic Peat Soil	EQRVTSGGLVQSPGGTGESEPISESEVASDAVPVVG
Ga0209058_13664612	3300026536	Soil	GREEQGVTSGGLAESPGGTGVSEPISGCERVSEVLSVVGRLKSTRSVVKTM
Ga0209648_107187131	3300026551	Grasslands Soil	GELGESPGGTGVSGPISESEVASDALSVVGLPNST
Ga0208575_10102821	3300026920	Soil	QRVTSGELAESSGGTGVSRPISESEVASDALSVVGRLNITYEAW
Ga0207857_10602312	3300027019	Tropical Forest Soil	QYVTSGELAESPGGTGVGEPISVSEVVSDALSVVGRLLITYEAW
Ga0209523_10986171	3300027548	Forest Soil	VTSGELSGSPGGTGVSRPISESEVASDALSVVGRLNST
Ga0209003_10551921	3300027576	Forest Soil	VTSGELAESPDNTGVSEPISGSEVASEARSVVGLPNSTLSAAKA
Ga0209528_11185701	3300027610	Forest Soil	VTSGELTESPGDTGVSEPISESEMASKALSVVGRLNITYEAWRKPRY
Ga0209040_101936692	3300027824	Bog Forest Soil	TSGELAESAGGTGVSRPISESEVASDALSVVGRLNSTYEAR
Ga0209693_101666871	3300027855	Soil	HGTEEQRVTSGELAGSPGGTGVSGPISESEVASEALSVVGRLNITYEAW
Ga0209701_100627444	3300027862	Vadose Zone Soil	RVTSGELTESPVGIGVSGPISASERASDALSVVRRLNST
Ga0209380_104757671	3300027889	Soil	GTEEQRVTSGELAGSPGGTGVSGPISESEVASEALSVVGRLNITYEAW
Ga0209698_107141541	3300027911	Watersheds	EEQRVTSGELAESPGGTGVSGPISVSEVASDALSVVGRLNSARRAAR
Ga0302141_12253411	3300029919	Bog	VTSGGLAGSPGGTGVSRPISESEGTSDALPVDGRLCNTTSAVKAA
Ga0210268_13393331	3300030629	Soil	GWHGTEEQRVTSGELAESPGNTGVSEPISVSEVVSDALSVVGLPNGT
Ga0138302_10775661	3300030937	Soil	MEEQCVTSGGLTESPGGTGVSRPISASERASEARSVVGRLNNWL
Ga0318541_100215064	3300031545	Soil	VTSGELAESLGGTGVSKPISESEGASDALSVVGRLNTTYEAW
Ga0307476_110172412	3300031715	Hardwood Forest Soil	QRVTSGELAGSPGGTGVSGPISESEVASDALSVVGRLNITYEAW
Ga0318493_103429351	3300031723	Soil	GTEEQRVTSGELAGSPSDTGVSEPISKSEVVSDALSVVGLPNSAR
Ga0318501_102470011	3300031736	Soil	GRHGTEEQRVTSGELAESPGGSGVSGPISVSEMASQSLSVVGQLNST
Ga0318501_106083731	3300031736	Soil	MEEQRVTSGELAESPGGTGVSGPISESEVASDALSVVGRLNSTYKAW
Ga0318501_108231411	3300031736	Soil	TEEQHVTSGELAESQGGTGVSKPISESEGASDALSVVGRLNTTYEAW
Ga0318502_108811421	3300031747	Soil	MEEQCVTSGELAESPGNTGVSRPISVSEVASDARSVVGRLNSTLSMAKVM
Ga0318521_101488421	3300031770	Soil	MEERRVTSGGLVGSPGGTGVSKPISDSEVASDALSVDGRLC
Ga0318546_102666902	3300031771	Soil	GVCGQHGTEEQGVTSGGLAESPSGVGVSEAISESETVSNALSVVGRLGST
Ga0318546_111782101	3300031771	Soil	VTSGELAESPGNTGVSKPISTSEMASDALSVVGQLNSTYE
Ga0318543_101945841	3300031777	Soil	VTSGELAGSPSDTGVSEPISKSEVVSDALSVVGLPN
Ga0318566_100673431	3300031779	Soil	GTEEQRVTSGELAESPVGIGVSGPISASEMASDALSVVRRLNST
Ga0318576_106362551	3300031796	Soil	HGTEEQRVTSGELTGSLGGTGVSGPISRSEVASDARSAVGRLRITD
Ga0318550_103201032	3300031797	Soil	TEEQGVTSGGLAESPSGVGVSEAISESETVSNALSVVGRLGST
Ga0318497_102109782	3300031805	Soil	MEEQRVTSGELAESPGGTGVSGPISESEVASDALSVVGQLNST
Ga0318511_106268521	3300031845	Soil	VTSGELAESPGGSGVSGPISASEVASNALAVVGRLNITYE
Ga0306925_106301361	3300031890	Soil	RVTSGELAESPGGTGVSGPISVSEMASDALSVVGRLNSTYQA
Ga0306921_114234641	3300031912	Soil	HGTEEQRVTSGGLAESPGGTGVSGPISESEVASKALSVVGQLNSTYEAW
Ga0310913_113105241	3300031945	Soil	MEEQRVTSGELAGSPGGTGVSGPISESEVASEALSVVGRLH
Ga0310909_109883101	3300031947	Soil	RHGTEEQRVTSGELAGSPSDTGVSEPISASEVVSDALSVVGLPNST
Ga0310909_116596451	3300031947	Soil	SGGLAESPGGTGVSGPISESEVASKALSVVGQLNSTYEAW
Ga0318530_100385102	3300031959	Soil	TEEQHVTSGELAESPGGTGVSRPISTSEVASDALSVVGQLNSTYEAW
Ga0318531_105632021	3300031981	Soil	MEEQRVTSGELAGSPGDTGVSRPISASEVASDALSVDGRLSST
Ga0306922_108082712	3300032001	Soil	MEEQHVTSGELAEFPGGTGVNGPISESEVASDALS
Ga0318559_105654442	3300032039	Soil	MEEQRVTSGELAESPGGTGVSGPISESEVASDALSV
Ga0318505_106050772	3300032060	Soil	MEEQRVTSGELAESPGGTGVSGPISESEVASDALSVVGRLN
Ga0306924_106185412	3300032076	Soil	GRNVTSGELAEPLGGTGVSKPISKSEGVSDVLSVVGRLHSTDETW
Ga0306924_124103821	3300032076	Soil	MEEQRVTSGELAGSPGGTGVSGPISESEVASEALSVVGRLHMRAEQRAV
Ga0318525_100848721	3300032089	Soil	ELAESPGGTGVSGPISVSEGASDALSVVGRLNSAC
Ga0318518_107394001	3300032090	Soil	TSGELAESPGGSGVSGPISASEVASNALAVVGRLNITYEAW
Ga0318577_105605321	3300032091	Soil	MEEQCVTSGELTGSPGGAGVSGPISASEVASDALSAVGRLNSTYKVRRK
Ga0318540_101585692	3300032094	Soil	GTEEQRVTSGELAESLVGIGVSGPISASEMASDALSVVRRLNST
Ga0316051_10185341	3300032119	Soil	MEEQCVTSGELTESPGGTGVSRPISASEMASEARSVVGRL
Ga0306920_1026957171	3300032261	Soil	SGELAESPGGTGVSGPISESEVASDALSVVGRLNTTDEAW
Ga0335079_101339534	3300032783	Soil	VTSGELAESSGGTGVSEPISASEVASDALSVVGRLNSTYK
Ga0335079_105704681	3300032783	Soil	DCGRHGTAGQRVTSGELAESPVGTGVSGPISESEVASEALSVVGRLHSTYETW
Ga0310914_107527582	3300033289	Soil	AESPGGTGVSRPISTSEVASDALSVVGQLNSTYEAW
Ga0310914_118885761	3300033289	Soil	MEEQCVTSGELAESPGNTGVSRPISVSEVASDARSVIGRLNSTLSMA
Ga0334790_074489_659_775	3300033887	Soil	MTSGGLTESLGGTRVSEPISKSEVVSDALSVVGLPNST
Ga0370483_0129448_442_558	3300034124	Untreated Peat Soil	MTSGGLAVSPGGTGVSEPISESEMASDALAVVGRLNST
Ga0370515_0191138_1_135	3300034163	Untreated Peat Soil	TEEQRVTSGELAGSPGGSGVSKPISESERVSEALSVVGRLSSVR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign