NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F045783

Metagenome / Metatranscriptome Family F045783

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F045783
Family Type Metagenome / Metatranscriptome
Number of Sequences 152
Average Sequence Length 40 residues
Representative Sequence MTTVQALWFRADEHPDGGEPDHQAFTQFDVLNVARRLLG
Number of Associated Samples 135
Number of Associated Scaffolds 152

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 3.29 %
% of genes near scaffold ends (potentially truncated) 95.39 %
% of genes from short scaffolds (< 2000 bps) 89.47 %
Associated GOLD sequencing projects 129
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (73.684 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(23.026 % of family members)
Environment Ontology (ENVO) Unclassified
(29.605 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.316 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.91%    β-sheet: 0.00%    Coil/Unstructured: 82.09%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 152 Family Scaffolds
PF01261AP_endonuc_2 17.76
PF00749tRNA-synt_1c 2.63
PF01699Na_Ca_ex 1.32
PF06224HTH_42 1.32
PF16901DAO_C 1.32
PF00072Response_reg 0.66
PF13419HAD_2 0.66
PF01544CorA 0.66
PF04389Peptidase_M28 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 152 Family Scaffolds
COG0008Glutamyl- or glutaminyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 2.63
COG0387Cation (Ca2+/Na+/K+)/H+ antiporter ChaAInorganic ion transport and metabolism [P] 1.32
COG0530Ca2+/Na+ antiporterInorganic ion transport and metabolism [P] 1.32
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 1.32
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.66


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A73.68 %
All OrganismsrootAll Organisms26.32 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000754|JGI11851J11668_1005448Not Available557Open in IMG/M
3300001305|C688J14111_10024684All Organisms → cellular organisms → Bacteria1785Open in IMG/M
3300001686|C688J18823_10589466Not Available710Open in IMG/M
3300002568|C688J35102_118027971Not Available524Open in IMG/M
3300003373|JGI25407J50210_10102312Not Available708Open in IMG/M
3300004153|Ga0063455_100446773All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300004463|Ga0063356_104956458Not Available572Open in IMG/M
3300005159|Ga0066808_1040721Not Available506Open in IMG/M
3300005172|Ga0066683_10794343Not Available551Open in IMG/M
3300005334|Ga0068869_101377725Not Available624Open in IMG/M
3300005340|Ga0070689_100314298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1307Open in IMG/M
3300005344|Ga0070661_101406790Not Available587Open in IMG/M
3300005347|Ga0070668_100005399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9486Open in IMG/M
3300005440|Ga0070705_100441500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album974Open in IMG/M
3300005466|Ga0070685_10254880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1164Open in IMG/M
3300005467|Ga0070706_102079164Not Available514Open in IMG/M
3300005518|Ga0070699_101945661Not Available538Open in IMG/M
3300005526|Ga0073909_10617395Not Available537Open in IMG/M
3300005553|Ga0066695_10750221Not Available567Open in IMG/M
3300005559|Ga0066700_10547651Not Available807Open in IMG/M
3300005561|Ga0066699_10095231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1951Open in IMG/M
3300005569|Ga0066705_10933652Not Available515Open in IMG/M
3300005614|Ga0068856_101007788Not Available851Open in IMG/M
3300005713|Ga0066905_101931664Not Available547Open in IMG/M
3300005843|Ga0068860_100912646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album895Open in IMG/M
3300005937|Ga0081455_10081443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2651Open in IMG/M
3300006358|Ga0068871_100757674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria893Open in IMG/M
3300006575|Ga0074053_11862110Not Available591Open in IMG/M
3300006575|Ga0074053_11940298Not Available576Open in IMG/M
3300006580|Ga0074049_12834218Not Available589Open in IMG/M
3300006580|Ga0074049_12975198Not Available516Open in IMG/M
3300006581|Ga0074048_12727487Not Available647Open in IMG/M
3300006755|Ga0079222_10937375Not Available733Open in IMG/M
3300006791|Ga0066653_10144832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1148Open in IMG/M
3300006844|Ga0075428_102147007Not Available577Open in IMG/M
3300006880|Ga0075429_100797631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria827Open in IMG/M
3300006903|Ga0075426_10219525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1380Open in IMG/M
3300007004|Ga0079218_11963929Not Available666Open in IMG/M
3300009137|Ga0066709_100090745All Organisms → cellular organisms → Bacteria3696Open in IMG/M
3300009137|Ga0066709_103851950Not Available545Open in IMG/M
3300009137|Ga0066709_104118298Not Available529Open in IMG/M
3300009156|Ga0111538_13299678Not Available561Open in IMG/M
3300009174|Ga0105241_10489332Not Available1095Open in IMG/M
3300009553|Ga0105249_10926360All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300009553|Ga0105249_11240839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria817Open in IMG/M
3300009808|Ga0105071_1053352Not Available658Open in IMG/M
3300009840|Ga0126313_10008352All Organisms → cellular organisms → Bacteria6392Open in IMG/M
3300009840|Ga0126313_10540492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria935Open in IMG/M
3300010037|Ga0126304_10458094Not Available854Open in IMG/M
3300010038|Ga0126315_10665201Not Available677Open in IMG/M
3300010044|Ga0126310_10313948Not Available1085Open in IMG/M
3300010301|Ga0134070_10454661Not Available513Open in IMG/M
3300010303|Ga0134082_10291819Not Available682Open in IMG/M
3300010326|Ga0134065_10306018Not Available611Open in IMG/M
3300010333|Ga0134080_10490854Not Available582Open in IMG/M
3300010335|Ga0134063_10176503Not Available998Open in IMG/M
3300010361|Ga0126378_10525736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1298Open in IMG/M
3300010362|Ga0126377_10126719Not Available2367Open in IMG/M
3300010396|Ga0134126_13096600Not Available501Open in IMG/M
3300010401|Ga0134121_11092787Not Available790Open in IMG/M
3300012001|Ga0120167_1067483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria760Open in IMG/M
3300012001|Ga0120167_1082992Not Available666Open in IMG/M
3300012004|Ga0120134_1068715Not Available636Open in IMG/M
3300012189|Ga0137388_11764762Not Available551Open in IMG/M
3300012204|Ga0137374_10009254All Organisms → cellular organisms → Bacteria11632Open in IMG/M
3300012207|Ga0137381_11719366Not Available517Open in IMG/M
3300012353|Ga0137367_10010895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia7266Open in IMG/M
3300012355|Ga0137369_10706439Not Available693Open in IMG/M
3300012360|Ga0137375_11347729Not Available535Open in IMG/M
3300012507|Ga0157342_1056972Not Available564Open in IMG/M
3300012514|Ga0157330_1024499Not Available714Open in IMG/M
3300012910|Ga0157308_10050979Not Available1076Open in IMG/M
3300012951|Ga0164300_10961104Not Available546Open in IMG/M
3300012957|Ga0164303_11177140Not Available559Open in IMG/M
3300012958|Ga0164299_10150663Not Available1287Open in IMG/M
3300012960|Ga0164301_10557623Not Available838Open in IMG/M
3300012977|Ga0134087_10217842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium862Open in IMG/M
3300012989|Ga0164305_10284837Not Available1213Open in IMG/M
3300012989|Ga0164305_11926685Not Available537Open in IMG/M
3300013100|Ga0157373_10110711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1931Open in IMG/M
3300013296|Ga0157374_12400982Not Available555Open in IMG/M
3300013297|Ga0157378_11388513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria745Open in IMG/M
3300013772|Ga0120158_10018089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5937Open in IMG/M
3300014157|Ga0134078_10600293Not Available527Open in IMG/M
3300014267|Ga0075313_1168617Not Available570Open in IMG/M
3300014325|Ga0163163_11053963Not Available876Open in IMG/M
3300015359|Ga0134085_10190380Not Available881Open in IMG/M
3300017792|Ga0163161_11957302Not Available521Open in IMG/M
3300017997|Ga0184610_1199814Not Available668Open in IMG/M
3300018082|Ga0184639_10417571Not Available691Open in IMG/M
3300018466|Ga0190268_10427880Not Available865Open in IMG/M
3300018466|Ga0190268_11533889Not Available582Open in IMG/M
3300018466|Ga0190268_11654864Not Available567Open in IMG/M
3300018469|Ga0190270_10332879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1371Open in IMG/M
3300018482|Ga0066669_10581239Not Available980Open in IMG/M
3300019890|Ga0193728_1368898Not Available507Open in IMG/M
3300020003|Ga0193739_1051701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1057Open in IMG/M
3300020012|Ga0193732_1052303Not Available694Open in IMG/M
3300020020|Ga0193738_1174628Not Available552Open in IMG/M
3300021073|Ga0210378_10135285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia954Open in IMG/M
3300021073|Ga0210378_10252540Not Available667Open in IMG/M
3300021078|Ga0210381_10219910Not Available667Open in IMG/M
3300022563|Ga0212128_10680767Not Available618Open in IMG/M
3300024290|Ga0247667_1064131Not Available678Open in IMG/M
3300025174|Ga0209324_10613067Not Available638Open in IMG/M
3300025901|Ga0207688_10141549Not Available1416Open in IMG/M
3300025921|Ga0207652_10691879Not Available910Open in IMG/M
3300025927|Ga0207687_10013465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5340Open in IMG/M
3300026067|Ga0207678_10089399All Organisms → cellular organisms → Bacteria2633Open in IMG/M
3300026078|Ga0207702_11640248Not Available636Open in IMG/M
3300026763|Ga0207568_103904Not Available590Open in IMG/M
3300027006|Ga0209896_1015926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria833Open in IMG/M
3300027725|Ga0209178_1124906Not Available874Open in IMG/M
3300027787|Ga0209074_10245268Not Available693Open in IMG/M
3300027886|Ga0209486_10894598Not Available588Open in IMG/M
3300027909|Ga0209382_10030026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia6550Open in IMG/M
3300027954|Ga0209859_1027421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album968Open in IMG/M
3300028381|Ga0268264_12468408Not Available525Open in IMG/M
3300028707|Ga0307291_1096558Not Available735Open in IMG/M
3300028717|Ga0307298_10103361Not Available810Open in IMG/M
3300028719|Ga0307301_10081807Not Available1014Open in IMG/M
3300028719|Ga0307301_10098631Not Available925Open in IMG/M
3300028719|Ga0307301_10125479Not Available821Open in IMG/M
3300028719|Ga0307301_10140185Not Available776Open in IMG/M
3300028720|Ga0307317_10014606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2366Open in IMG/M
3300028722|Ga0307319_10303318Not Available528Open in IMG/M
3300028744|Ga0307318_10008348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia3341Open in IMG/M
3300028755|Ga0307316_10001588All Organisms → cellular organisms → Bacteria → Terrabacteria group7089Open in IMG/M
3300028755|Ga0307316_10151619Not Available826Open in IMG/M
3300028793|Ga0307299_10263354Not Available647Open in IMG/M
3300028796|Ga0307287_10075485Not Available1260Open in IMG/M
3300028809|Ga0247824_10580540Not Available671Open in IMG/M
3300028810|Ga0307294_10007473Not Available2656Open in IMG/M
3300028812|Ga0247825_11386236Not Available515Open in IMG/M
3300028819|Ga0307296_10365089Not Available789Open in IMG/M
3300028828|Ga0307312_10077529Not Available2026Open in IMG/M
3300028878|Ga0307278_10133287Not Available1115Open in IMG/M
3300028878|Ga0307278_10159730Not Available1008Open in IMG/M
3300030336|Ga0247826_10919147Not Available691Open in IMG/M
3300031184|Ga0307499_10292951Not Available534Open in IMG/M
3300031852|Ga0307410_11665723Not Available565Open in IMG/M
3300031901|Ga0307406_10707759Not Available842Open in IMG/M
3300031938|Ga0308175_101834078Not Available679Open in IMG/M
3300031995|Ga0307409_101409830Not Available723Open in IMG/M
3300032003|Ga0310897_10234731All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300032004|Ga0307414_11922197Not Available552Open in IMG/M
3300032012|Ga0310902_10209274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1150Open in IMG/M
3300032180|Ga0307471_102455975Not Available659Open in IMG/M
3300032180|Ga0307471_103510605Not Available555Open in IMG/M
3300034417|Ga0364941_007551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1958Open in IMG/M
3300034817|Ga0373948_0018202Not Available1317Open in IMG/M
3300034818|Ga0373950_0176840Not Available501Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil23.03%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.61%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.95%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.29%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.29%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.29%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.29%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.63%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.63%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.97%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.32%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.32%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.32%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.32%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.32%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.32%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.32%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.66%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.66%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.66%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.66%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.66%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.66%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.66%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.66%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.66%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.66%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.66%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.66%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000754Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TBEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005159Soil and rhizosphere microbial communities from Laval, Canada - mgLPBEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009808Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012001Permafrost microbial communities from Nunavut, Canada - A24_80cm_12MEnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014267Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020020Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026763Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027006Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027954Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034417Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11851J11668_100544823300000754SoilKTVQPLWFRADDGASPVEPDYQAFTQMDVLNLVDRLRS*
C688J14111_1002468433300001305SoilMTTVQALWYRVDDHSDGAEPDHQAFTQLDVLNVARRLLAA*
C688J18823_1058946613300001686SoilQAFWFRADDDERGIDADFEAFTQMDVLNAVRRLNGEL*
C688J35102_11802797113300002568SoilLGMTTVQAVWFRADENPDGAEPDHQAFTQMDVLNIADRLLAEG*
JGI25407J50210_1010231213300003373Tabebuia Heterophylla RhizosphereKAVGMTTVQAYWFRADDDERGLEPDFEAFTPMDVLNVVRRLVGET*
Ga0063455_10044677333300004153SoilGMTTVQALWFRADEHPDGGVPDFEAFTEMDVLNFVDRLAAAA*
Ga0063356_10495645823300004463Arabidopsis Thaliana RhizosphereVRGSNEAGMTSVQALWFRADENDEGGEPDHQAFTQMDVLNLADRLLA*
Ga0066808_104072113300005159SoilSEAGMATVQALWFRADENPDGAEPDHQAFTQMDVLNIVDRLLAAA*
Ga0066683_1079434313300005172SoilGMTTVQALWFRADEHPEGGEPDFQAFTPMDILNIVRRLRGEQP*
Ga0068869_10137772513300005334Miscanthus RhizosphereMTTVQALWFRADENPDGAEPDHQAFTQMDVLNIADRLLAAA*
Ga0070689_10031429813300005340Switchgrass RhizosphereMTTVQAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGEL*
Ga0070661_10140679013300005344Corn RhizosphereRGAAELGMTTVQALWYRADDHPDGAEPDHQAFTQLDVLNVARRLARD*
Ga0070668_10000539913300005347Switchgrass RhizosphereGELGMRTVQALWFRVDEHADGREPDHQAFTQVDVLNVARRLA*
Ga0070705_10044150013300005440Corn, Switchgrass And Miscanthus RhizosphereAGMTTVQAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGEL*
Ga0070685_1025488013300005466Switchgrass RhizosphereGAAELGMTTVQALWYRADDHPDGAEPDYQAFTQLDVLNIARRLAA*
Ga0070706_10207916413300005467Corn, Switchgrass And Miscanthus RhizosphereLGMATVQALWFRADENPDGREPDYQAFTQHDVLNVALRLLAA*
Ga0070699_10194566113300005518Corn, Switchgrass And Miscanthus RhizosphereVQALWFRADEHPDGGEPDFQAFTQFDVLNIARRLAALPG*
Ga0073909_1061739523300005526Surface SoilTVQALWFRADEHPDGGEPDFQAFTQFDVLNIVDRLRA*
Ga0066695_1075022123300005553SoilTTVQALWFRADEHPDGGVPDFQAFTMHDVLNIARRLAAES*
Ga0066700_1054765123300005559SoilGMTTVQALWFRADEHPDGAEPDHQAFTQLDVLNIARRLAA*
Ga0066699_1009523143300005561SoilQALWFRADDTPGAPEPDYRAFTQMDVLNVAARLLAAA*
Ga0066705_1093365223300005569SoilWFRADEHPEGGEPDFQAFTQMDVLNVVGRLDTASV*
Ga0068856_10100778833300005614Corn RhizosphereGMTTVQAVWFRADENPDGAEPDYQAFTQMDVLNVADRLLGSA*
Ga0066905_10193166413300005713Tropical Forest SoilGMTSVQALWFRADENDEGGEPDHQAFTQMDVLNLADRLLA*
Ga0068860_10091264613300005843Switchgrass RhizosphereTVQAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGEL*
Ga0081455_1008144343300005937Tabebuia Heterophylla RhizosphereVQALWFRADEHPDGGEPDHEAFTQMDVLNIVERLRPAA*
Ga0068871_10075767433300006358Miscanthus RhizosphereSRLGIRTVQALWFRADEHPDGGVPDYQAFTQMDVLNVARRLAR*
Ga0074053_1186211023300006575SoilLWFRADENPDGAEPDHQAFTQMDVLNIADRLLGSG*
Ga0074053_1194029823300006575SoilTVQAVWFRADEHPEGREPDHQAFTMMDVLNVADRLVRA*
Ga0074049_1283421813300006580SoilQALWFRADENPDGAEPDHQAFTQMDVLNIADRLLAAA*
Ga0074049_1297519813300006580SoilVQALWFRADEHPDGREPDHRAFTMMDVLNVAERLVSG*
Ga0074048_1272748723300006581SoilWFRADENPHGAEPDHQAFTQMDVLNIADRLLGST*
Ga0079222_1093737523300006755Agricultural SoilRGSAELGMTTVQALWYRADEHPDGAEPDHQAFTQLDVLNVARRLARD*
Ga0066653_1014483213300006791SoilQALWFRADEHPEGGDPDFQAFTQMDVLNVVDRLAAAA*
Ga0075428_10214700713300006844Populus RhizosphereALGMQTVQAFWFRADPDDGGPEPDWEAFTPMDVLNVVRRLTGES*
Ga0075429_10079763113300006880Populus RhizosphereVQAFWFRADPDDGGPEPDWEAFTPMDVLNVVRRLTGES*
Ga0075426_1021952513300006903Populus RhizosphereVQALWFRADEHPEGGEPDHLALTQFDVLNIARRLVAA*
Ga0079218_1196392913300007004Agricultural SoilALWFRADDDQRGVDPDYEAYTPMDVLNVVLRLLGER*
Ga0066709_10009074513300009137Grasslands SoilTVQALWFRADEHPDGGEPDHQAFTQLDVLNIVRRRLGN*
Ga0066709_10385195023300009137Grasslands SoilVQALWFRADEHPDGAEPDHQAFTQLDVLNIARRLAA*
Ga0066709_10411829813300009137Grasslands SoilMTTVQALWFRADEHPDGAEHDHQAFTQLDVLNIARRLAA*
Ga0111538_1329967823300009156Populus RhizosphereDDDERGLDPDHEAFTPMDVLNVVRRLLGEDAGHYT*
Ga0105241_1048933213300009174Corn RhizosphereAELGMTTVQALWFRADEHPDGAEPDHQAFTQLDVLNIARRLAT*
Ga0105249_1092636033300009553Switchgrass RhizosphereVTTVQALWFRVDEGSGGVEPDYLAFTPLDVLAIVRQLAD*
Ga0105249_1124083913300009553Switchgrass RhizosphereTVQALWFRADENPDGIEPDFQAFTQMDVLNIVRRLNGE*
Ga0105071_105335223300009808Groundwater SandVQAFWFRADEDERGLDPDYEAFTAMDVLNVVRRLTGEAE*
Ga0126313_1000835273300009840Serpentine SoilIGMKTVQAFWFRADEGVDGVEPDYEAFTLMDVLNVVDRLAA*
Ga0126313_1054049213300009840Serpentine SoilSVQALWFRADENDEGGEPDHQAFTQMDVLNIADRLVA*
Ga0126304_1045809413300010037Serpentine SoilGMTTVLAYWFRADEDDRGLEPDHEAFTQMDVLNVVRRLLRET*
Ga0126315_1066520123300010038Serpentine SoilMTTVQALWFRADERSGGAAPDFQAFTPMDVLNVVRRLNGEV*
Ga0126310_1031394813300010044Serpentine SoilVWFRADENPNGIEPDYQAFTQIDVLNVVERVSGRR*
Ga0134070_1045466123300010301Grasslands SoilQALWFRADEHPDGAVPDYQAFTQLDVLNVARRLAA*
Ga0134082_1029181913300010303Grasslands SoilVQALWFRADEHPEGGEPDFQAFTQMDVLNVVGRLDTASV*
Ga0134065_1030601813300010326Grasslands SoilELGMTTVQALWFRADEHPDGREPDHQAFTQLDVLNVARRLLDA*
Ga0134080_1049085423300010333Grasslands SoilTTVQALWFRADEHPEGGEPDFQAVTPMDILNIVRRLRGEQP*
Ga0134063_1017650333300010335Grasslands SoilWFRADEHPEGGEPDFQAFTQMDVLNVVDRLAAAA*
Ga0126378_1052573613300010361Tropical Forest SoilMTTVQAVWFRADEHPDGGVPDHVAFTQFDVLNIARRLVSV*
Ga0126377_1012671913300010362Tropical Forest SoilQALWFRADENPDGARPDHEAFTQMDVLNIADRLLGSGW*
Ga0134126_1309660023300010396Terrestrial SoilMATVQAFWFRADDDERGLDPDFEAFTPMDVLNVVRRLSGEL*
Ga0134121_1109278713300010401Terrestrial SoilAGMVTVQALWSRADEHPDGAEPDFEAYTMMDVLNIAARLNEPR*
Ga0120167_106748323300012001PermafrostMKTVQAVWFRADENPAGAEPDYQAFTQFDVLNIADRLLS*
Ga0120167_108299223300012001PermafrostMTTVQALWFRADEHLEGGEPDYEAFTQMDVLNIARRLAA*
Ga0120134_106871523300012004PermafrostMTTVQALWFSADRVDGIEPDFMAFTPMDVLNIARRLRD*
Ga0137388_1176476223300012189Vadose Zone SoilKTVQALWFRADDHPDGVEPDFQAFTQMDILNIVKRLS*
Ga0137374_10009254133300012204Vadose Zone SoilANEVGMTSVQAVWFRADEHSEGGEPDHQAFTQMDVLNVVDRALASA*
Ga0137381_1171936613300012207Vadose Zone SoilMRTVQALWFRAEGKPPGVEPDFCAFTQADVLDIVRRLTGES*
Ga0137367_10010895103300012353Vadose Zone SoilQALWFRADEHPQGGEPDHQAFTQMDVLNIARRLA*
Ga0137369_1070643933300012355Vadose Zone SoilGMTTVQALWFRADENPDGAEPDHEAFTQMDVLNIADRLLGAV*
Ga0137375_1134772913300012360Vadose Zone SoilMTTVQALWFRADENPDGAEPDHEAFTQMDVLNIADRLLGAV*
Ga0157342_105697213300012507Arabidopsis RhizosphereELGMTTVQALWYRADEHPDGAEPDYQAFTQLDVLNVAQRLAT*
Ga0157330_102449913300012514SoilVQAVWFRADENPEGAEADHQAFTQLDVLNITRRLVAA*
Ga0157308_1005097933300012910SoilRGAAELGMTTVQALWYRADDHPDGAEPDHQAFTQLDVLNVARQLAA*
Ga0164300_1096110413300012951SoilMTTVQALWFRADEHPDGGEPDHQAFTQFDVLNVARRLLG*
Ga0164303_1117714023300012957SoilVQALWFRADEHPDGAEPDYQAFTQLDVLNIARRVAT*
Ga0164299_1015066333300012958SoilMTTVQALWFRADEHPEGGEPDFQAFTQMDVLNVVDRLAAAA*
Ga0164301_1055762333300012960SoilVQALWFRADEHPEGAEPDHQAFTQFDVLNVARRLLG*
Ga0134087_1021784213300012977Grasslands SoilLWFRADAYLGAPEPDYQAFTQMDVLNIAARVSAT*
Ga0164305_1028483733300012989SoilTTVQALWFRADEHPEGGEPDFQAFTQMDVLNVVDRLAAAA*
Ga0164305_1192668513300012989SoilMTTVQALWFRADEHPGGGEPDHQAFTQFDVLNIARRMLG*
Ga0157373_1011071133300013100Corn RhizosphereGMTTVQALWYRADDHPDGAEPDYQAFTQLDVLNVARRLARD*
Ga0157374_1240098213300013296Miscanthus RhizosphereRDAGMVTVQALWSRADEHPDGAEPDFEAYTMMDVLNIAARLNEAR*
Ga0157378_1138851313300013297Miscanthus RhizosphereMTTVQALWFRADEHPDGAEPDHQAFTQLDVLNIARRLATSP*
Ga0120158_1001808913300013772PermafrostELGMTTVQALWFRADEHPEGGEPDYEAFTQMDVLNIARRLQQ*
Ga0134078_1060029323300014157Grasslands SoilELGMTTVQALWYRADDHPDGAEPDHQAFTQLDVLNVARRLARNS*
Ga0075313_116861713300014267Natural And Restored WetlandsLGMTTVQAFWFRADPDDRAPEPDWEAFTPMDVLNIVRRLTGES*
Ga0163163_1105396333300014325Switchgrass RhizosphereFWFRADDDERGLDPDFEAFTTMDVLNVVRRLCGEL*
Ga0134085_1019038033300015359Grasslands SoilLWFRADEHPDGGEPDFQAFTQFDVLNIARRLVAA*
Ga0163161_1195730213300017792Switchgrass RhizosphereMMTVQALWFRADENPDGAEPDHQAFTQMDVMNIADRLLAAA
Ga0184610_119981423300017997Groundwater SedimentAEVGMTTVQAMWFRADEHPEGGEPDYQAFTQMDGLNIANRLLPAA
Ga0184639_1041757123300018082Groundwater SedimentGELGMTTVQALWFRADENPDGAEPDHQAFTQMDVLNIVDRLLGSG
Ga0190268_1042788013300018466SoilGMTTVQALWFRADEHPEGGEPDYLAFTQMDVLNFVDRLRS
Ga0190268_1153388913300018466SoilAKELGMTTVQALWFRADDDERGLDPDYEAFTPMDVLNVVRRLAGET
Ga0190268_1165486423300018466SoilGMTTVLAYWFRADEDDRGLEPDHEAFTQMDVLNVVRRLLGET
Ga0190270_1033287913300018469SoilAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGAL
Ga0066669_1058123913300018482Grasslands SoilQALWFRADEHPDGAEPDHQAFTQLDVLNVARRLAA
Ga0193728_136889823300019890SoilTTVQALWFRADESPDGGEPDFQAFTQMDVLNVVDRLAAAA
Ga0193739_105170113300020003SoilIWFRADENPDGIEPDYQAFTQMDVLNVVERLRAAA
Ga0193732_105230323300020012SoilELGMTTVQALWFRVDEHPEGGVPDFEAFTQMDVLNFIDRLAAAA
Ga0193738_117462813300020020SoilMTTVQALWFRADDHPDAVEADYQAFTQMDVLNVVRRLNGE
Ga0210378_1013528533300021073Groundwater SedimentMTTVLAHWFRADEDDRGLEPDHEAFTQMDVLNVVRRLLGET
Ga0210378_1025254013300021073Groundwater SedimentGELGMTTVQALWFRADEHPEGGEPDYLAFTQMDVLNFVDRLRS
Ga0210381_1021991023300021078Groundwater SedimentTTVQALWFRADENPDGAEPDHQAFTQMDVLNIADRLLASG
Ga0212128_1068076723300022563Thermal SpringsLWFRADADERGVEPDFEAFTQMDVLNIARRLVGEI
Ga0247667_106413113300024290SoilAELGMTTVQALWFRADEHPNGAEPDHQAFTQLDVLNIARRLAA
Ga0209324_1061306713300025174SoilMRAVQALWYRVDDDPRGLDADFEAFTQLDVLNAVRRLLGEI
Ga0207688_1014154933300025901Corn, Switchgrass And Miscanthus RhizosphereTVQALWFRADEHPDGAEPDHQAFTQLDVLNIARRLAT
Ga0207652_1069187913300025921Corn RhizosphereVQALWYRADEHPDGAEPDHQAFTQLDVLNVARRLARD
Ga0207687_1001346583300025927Miscanthus RhizosphereGRDATVQALWFRADDDERGLEPDYEAFTPMDVLNVVRRLSGEL
Ga0207678_1008939963300026067Corn RhizosphereMTTVQALWYRADEHPDGAEPDYQAFTQLDVLNVAQRLAT
Ga0207702_1164024823300026078Corn RhizosphereELGMTTVQALWFRADEHPDGAEPDHRAFTQLDVLNVARRLQG
Ga0207568_10390423300026763SoilAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGEL
Ga0209896_101592633300027006Groundwater SandQALWFRADEHPDGGKPDYTAFTQMDVLNVVTRLNSE
Ga0209178_112490613300027725Agricultural SoilTVQALWFRADEHPEGGEPDFQAFTQMDVLNVVDRLAAAA
Ga0209074_1024526823300027787Agricultural SoilELGMTTVQALWYRVDEHPDGAEPDYQAFTQLDVLNVAQRLAT
Ga0209486_1089459813300027886Agricultural SoilLWFRADDDQRGVDPDYEAYTPMDVLNVVLRLLGER
Ga0209382_1003002683300027909Populus RhizosphereQALWFRADDHPEGGEPEFQAFTQMDVLNVVDRLAAAA
Ga0209859_102742113300027954Groundwater SandLGMTTVQAFWFRADDDERGLDPDYEAFTAMDVLNVVRRLTGEL
Ga0268264_1246840813300028381Switchgrass RhizosphereTVQAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGEL
Ga0307291_109655833300028707SoilGMTTVQAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGEL
Ga0307298_1010336113300028717SoilLWFRADENPDGAEPDHQAFTQMDVLNIADRLLAAA
Ga0307301_1008180733300028719SoilAGELGMMTVQALWFRADEHADGREPDHQAFTQADVLNVVRHLA
Ga0307301_1009863133300028719SoilELGMTTVQALWFRADAHPEGGEPDYLAFTQMDVLNFVDRLRT
Ga0307301_1012547923300028719SoilTVQALWFRADENPDGAEPDHQAFTQMDVLNIADRLLASG
Ga0307301_1014018513300028719SoilYWFRADQDDRGLEPDHEAFTQMDVLNVVRRLLGET
Ga0307317_1001460633300028720SoilMTTVQALWFRADENPDGAEPDHQAFTQMDVLNIADRLLASG
Ga0307319_1030331823300028722SoilTSVQAVWFRADEHPEGGEPDHQAFTQMDVLNLADRALTAA
Ga0307318_1000834813300028744SoilVLAYWFRADEDERGLEPDYEAFTQMDVLNVVRRLNGEL
Ga0307316_10001588103300028755SoilTVQALWFRADEHPDGAEPDHRAFTQLDVLNVVRRLT
Ga0307316_1015161913300028755SoilVRGAAELGMTTVQALWYRADEHPDGAEPDHQAFTQLDVLNVARRLAA
Ga0307299_1026335413300028793SoilGELGMTTVQALWFRADEHADGREPDHQAFTQADVLNVARHLA
Ga0307287_1007548533300028796SoilVRGSNEVGMTSVQAIWFRADEHADGDEPDYQAFTQMDVLNIADRLLVEA
Ga0247824_1058054013300028809SoilKEAGMTTVQAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGEL
Ga0307294_1000747313300028810SoilALWFRADENPDGAEPDHQAFTQMDVLNIADRLLASG
Ga0247825_1138623623300028812SoilMATVQALWFRADDHPGGIEADYQAFTQMDVLNVVRRLTGE
Ga0307296_1036508913300028819SoilGANEVGMTSVQAVWFRADEHPEGGEPDHQAFTQMDVLNLADRALTAA
Ga0307312_1007752943300028828SoilQALWFRADEHPEGGEPDFQAFTQMDVLNVVDRLAAAA
Ga0307278_1013328733300028878SoilVQALWFRADEHADGREPDHQAFTQADVLNVARRLA
Ga0307278_1015973013300028878SoilRGANDGGMTSVQAVWFRADEHPEGGEPDHQAFTQMDVLNFVDRALTPA
Ga0247826_1091914713300030336SoilFWFRADDDERGLDPDYEAFTAMDVLNVARRLLGEL
Ga0307499_1029295113300031184SoilQAFWFRADDDERGLDPDFEAFTTMDVLNVVRRLSGEL
Ga0307410_1166572313300031852RhizosphereVGMTTVQALWFRVDEHPDGAEPDHQAFTQLDVLNIARRLAGN
Ga0307406_1070775913300031901RhizosphereSNEAGMTSVQALWFRADENAEGGEPDHQAFTQMDVLNLADRLLT
Ga0308175_10183407813300031938SoilGAAEVGMTTVQALWYRADEHPDGAEPDHQAFTQLDVLNVARRLGA
Ga0307409_10140983033300031995RhizosphereTAQALWFRVDDHPDGGEPDFQAFTQVDVLNAARRLQP
Ga0310897_1023473133300032003SoilQAFWFRADDDERGLAPDFEAFTTMDVLNVVRRLSGEL
Ga0307414_1192219723300032004RhizosphereTVLAYWFRADEDDRGLEPDHEAFTQMDVLNVVRRLFGET
Ga0310902_1020927433300032012SoilMTTVQAFWFRADDDERGLEPDFEAFTTMDVLNVVRRLSGEL
Ga0307471_10245597513300032180Hardwood Forest SoilWFRADDHPEGGEPDFQAFTQMDVLNIARRLRQIAVSAS
Ga0307471_10351060523300032180Hardwood Forest SoilGMTTVQALWFRADEHPDGAEPDHQAFTQLDVLNIARRLAT
Ga0364941_007551_1833_19553300034417SedimentMATVQALWFRADDHPDGVEADYQAFTQMDVLNVVRRLNGE
Ga0373948_0018202_2_1123300034817Rhizosphere SoilALWFRADEHPEGGEPDFQAFTQMDVLNVVDRLAAAA
Ga0373950_0176840_392_4993300034818Rhizosphere SoilQALWYRADEHPDGAEPDYQAFTQLDVLNVAQRLAT


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