Metagenome / Metatranscriptome Family F045408

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045408
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	97 residues
Representative Sequence	RDDQGRVLAAVPDTAGALPPPRLALTGEMLFAPGDAMVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR
Number of Associated Samples	145
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.92 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	84.97 %
Associated GOLD sequencing projects	134
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.660 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.497 % of family members)
Environment Ontology (ENVO)	Unclassified (35.948 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.216 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.26% β-sheet: 16.26% Coil/Unstructured: 67.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF13432	TPR_16	64.05
PF14559	TPR_19	11.76
PF00535	Glycos_transf_2	1.31
PF13911	AhpC-TSA_2	0.65
PF13181	TPR_8	0.65
PF00012	HSP70	0.65
PF02518	HATPase_c	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.66 %
Unclassified	root	N/A	16.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.66 %
Unclassified	root	N/A	16.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.66 %
Unclassified	root	N/A	16.34 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	66.67 %
Unclassified	root	N/A	16.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	66.67 %
Unclassified	root	N/A	16.34 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.61 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	66.67 %
Unclassified	root	N/A	16.34 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.61 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	55.56 %
Unclassified	root	N/A	16.34 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.31 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	55.56 %
Unclassified	root	N/A	16.34 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.31 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	55.56 %
Unclassified	root	N/A	16.34 %
Desulfotignum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfotignum	1.31 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	55.56 %
Unclassified	root	N/A	16.34 %
Desulfotignum balticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfotignum → Desulfotignum balticum	1.31 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_1998056	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
2209111007\|2215403274	Not Available	539	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104012997	Not Available	543	Open in IMG/M
3300000890\|JGI11643J12802_10018585	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300001990\|JGI24737J22298_10075158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1007	Open in IMG/M
3300002122\|C687J26623_10036203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1324	Open in IMG/M
3300002245\|JGIcombinedJ26739_100250529	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300002886\|JGI25612J43240_1026783	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300002914\|JGI25617J43924_10086938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1129	Open in IMG/M
3300003321\|soilH1_10367802	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1442	Open in IMG/M
3300003993\|Ga0055468_10291197	Not Available	520	Open in IMG/M
3300004013\|Ga0055465_10016708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfotignum → Desulfotignum balticum	1609	Open in IMG/M
3300004058\|Ga0055498_10078306	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300004463\|Ga0063356_100380409	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300004479\|Ga0062595_100020488	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2488	Open in IMG/M
3300005206\|Ga0068995_10027661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	923	Open in IMG/M
3300005293\|Ga0065715_10146762	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300005328\|Ga0070676_10083552	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300005340\|Ga0070689_100405324	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1153	Open in IMG/M
3300005353\|Ga0070669_100069455	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2602	Open in IMG/M
3300005364\|Ga0070673_100993423	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	781	Open in IMG/M
3300005367\|Ga0070667_100094744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2573	Open in IMG/M
3300005438\|Ga0070701_10100046	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300005440\|Ga0070705_100181528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1426	Open in IMG/M
3300005440\|Ga0070705_100724667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	784	Open in IMG/M
3300005444\|Ga0070694_101073330	Not Available	671	Open in IMG/M
3300005445\|Ga0070708_100743101	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005459\|Ga0068867_100005009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9338	Open in IMG/M
3300005468\|Ga0070707_100353748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1426	Open in IMG/M
3300005468\|Ga0070707_101841264	Not Available	572	Open in IMG/M
3300005536\|Ga0070697_100143687	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2007	Open in IMG/M
3300005546\|Ga0070696_100565687	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	913	Open in IMG/M
3300005559\|Ga0066700_11049946	Not Available	534	Open in IMG/M
3300005875\|Ga0075293_1067986	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300005876\|Ga0075300_1001221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1951	Open in IMG/M
3300005878\|Ga0075297_1010894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	881	Open in IMG/M
3300005883\|Ga0075299_1010811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	788	Open in IMG/M
3300006041\|Ga0075023_100064785	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1183	Open in IMG/M
3300006163\|Ga0070715_10209803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	995	Open in IMG/M
3300006755\|Ga0079222_10015811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2893	Open in IMG/M
3300006755\|Ga0079222_10126395	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1404	Open in IMG/M
3300006804\|Ga0079221_11412351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300006845\|Ga0075421_102355579	Not Available	558	Open in IMG/M
3300006854\|Ga0075425_100319502	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300006954\|Ga0079219_10041102	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300009038\|Ga0099829_10429838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1093	Open in IMG/M
3300009088\|Ga0099830_10163168	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300009089\|Ga0099828_10432445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1187	Open in IMG/M
3300009147\|Ga0114129_10954714	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1083	Open in IMG/M
3300009174\|Ga0105241_12234422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300009176\|Ga0105242_12189218	Not Available	598	Open in IMG/M
3300009553\|Ga0105249_10415623	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1378	Open in IMG/M
3300009553\|Ga0105249_10690176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1080	Open in IMG/M
3300010048\|Ga0126373_12263870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300010362\|Ga0126377_11995614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	656	Open in IMG/M
3300010375\|Ga0105239_10130355	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2796	Open in IMG/M
3300010400\|Ga0134122_10238545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1529	Open in IMG/M
3300010401\|Ga0134121_10480929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1139	Open in IMG/M
3300011410\|Ga0137440_1003007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2248	Open in IMG/M
3300011435\|Ga0137426_1235188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300011438\|Ga0137451_1025137	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300012035\|Ga0137445_1066804	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300012189\|Ga0137388_10245700	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1627	Open in IMG/M
3300012210\|Ga0137378_10458576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1180	Open in IMG/M
3300012582\|Ga0137358_10101248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1950	Open in IMG/M
3300012683\|Ga0137398_10746898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	682	Open in IMG/M
3300012912\|Ga0157306_10019018	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1451	Open in IMG/M
3300013105\|Ga0157369_10256937	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300013306\|Ga0163162_12595650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300014320\|Ga0075342_1151314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300014325\|Ga0163163_10275784	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300014873\|Ga0180066_1115489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300014881\|Ga0180094_1122411	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	606	Open in IMG/M
3300015372\|Ga0132256_102562984	Not Available	611	Open in IMG/M
3300015373\|Ga0132257_100383030	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1706	Open in IMG/M
3300015374\|Ga0132255_100714660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1489	Open in IMG/M
3300017927\|Ga0187824_10237279	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	630	Open in IMG/M
3300017959\|Ga0187779_10365412	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	935	Open in IMG/M
3300017966\|Ga0187776_10010448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4970	Open in IMG/M
3300017993\|Ga0187823_10371673	Not Available	514	Open in IMG/M
3300017993\|Ga0187823_10395882	Not Available	502	Open in IMG/M
3300018063\|Ga0184637_10044397	All Organisms → cellular organisms → Bacteria	2703	Open in IMG/M
3300018074\|Ga0184640_10019720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2560	Open in IMG/M
3300018422\|Ga0190265_10628560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1194	Open in IMG/M
3300019360\|Ga0187894_10048214	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2528	Open in IMG/M
3300019789\|Ga0137408_1106703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1219	Open in IMG/M
3300019881\|Ga0193707_1016058	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2505	Open in IMG/M
3300020004\|Ga0193755_1153367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	697	Open in IMG/M
3300020009\|Ga0193740_1063372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300020070\|Ga0206356_11403832	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300021086\|Ga0179596_10652393	Not Available	533	Open in IMG/M
3300021403\|Ga0210397_10407996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1017	Open in IMG/M
3300021478\|Ga0210402_10904746	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	809	Open in IMG/M
3300025160\|Ga0209109_10026850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3105	Open in IMG/M
3300025558\|Ga0210139_1007319	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2021	Open in IMG/M
3300025560\|Ga0210108_1009328	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300025567\|Ga0210076_1016491	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfotignum → Desulfotignum balticum	1572	Open in IMG/M
3300025885\|Ga0207653_10021615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2040	Open in IMG/M
3300025903\|Ga0207680_10998493	Not Available	599	Open in IMG/M
3300025907\|Ga0207645_10003166	All Organisms → cellular organisms → Bacteria	12602	Open in IMG/M
3300025911\|Ga0207654_11258867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300025914\|Ga0207671_10164607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1719	Open in IMG/M
3300025915\|Ga0207693_10504291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	944	Open in IMG/M
3300025919\|Ga0207657_10005823	All Organisms → cellular organisms → Bacteria	12837	Open in IMG/M
3300025935\|Ga0207709_11432733	Not Available	572	Open in IMG/M
3300025961\|Ga0207712_10469018	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1071	Open in IMG/M
3300025962\|Ga0210070_1007793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1159	Open in IMG/M
3300026118\|Ga0207675_100145313	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2255	Open in IMG/M
3300026359\|Ga0257163_1077740	Not Available	537	Open in IMG/M
3300026377\|Ga0257171_1059404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300026481\|Ga0257155_1064226	Not Available	585	Open in IMG/M
3300026482\|Ga0257172_1064085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	674	Open in IMG/M
3300026507\|Ga0257165_1000144	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5599	Open in IMG/M
3300026508\|Ga0257161_1037389	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	964	Open in IMG/M
3300026514\|Ga0257168_1043089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	982	Open in IMG/M
3300026515\|Ga0257158_1070990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300026551\|Ga0209648_10533346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300027651\|Ga0209217_1116935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	753	Open in IMG/M
3300027651\|Ga0209217_1183843	Not Available	568	Open in IMG/M
3300027671\|Ga0209588_1138398	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300027787\|Ga0209074_10227484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300027862\|Ga0209701_10659250	Not Available	545	Open in IMG/M
3300027909\|Ga0209382_10961386	Not Available	894	Open in IMG/M
3300027910\|Ga0209583_10068019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1299	Open in IMG/M
3300027947\|Ga0209868_1007330	Not Available	1046	Open in IMG/M
3300027952\|Ga0209889_1019178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1571	Open in IMG/M
3300028381\|Ga0268264_10384528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1345	Open in IMG/M
3300028536\|Ga0137415_10174529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1977	Open in IMG/M
3300028587\|Ga0247828_11247051	Not Available	500	Open in IMG/M
3300028592\|Ga0247822_11503382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300028711\|Ga0307293_10003476	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4049	Open in IMG/M
3300028768\|Ga0307280_10283926	Not Available	601	Open in IMG/M
3300028792\|Ga0307504_10029438	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1441	Open in IMG/M
3300028792\|Ga0307504_10168217	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	756	Open in IMG/M
3300028799\|Ga0307284_10184909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300028809\|Ga0247824_10882870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300028811\|Ga0307292_10223741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	777	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10088298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	827	Open in IMG/M
3300031455\|Ga0307505_10451082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300031547\|Ga0310887_11128673	Not Available	504	Open in IMG/M
3300031823\|Ga0307478_11082387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	669	Open in IMG/M
3300031962\|Ga0307479_10066662	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3472	Open in IMG/M
3300032017\|Ga0310899_10589095	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300032174\|Ga0307470_11427764	Not Available	572	Open in IMG/M
3300032180\|Ga0307471_100192332	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2029	Open in IMG/M
3300032421\|Ga0310812_10365258	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	647	Open in IMG/M
3300032893\|Ga0335069_10534323	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1355	Open in IMG/M
3300033233\|Ga0334722_10506703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300033502\|Ga0326731_1026282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1401	Open in IMG/M
3300033551\|Ga0247830_10116088	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300033551\|Ga0247830_10144031	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300034178\|Ga0364934_0223616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	713	Open in IMG/M
3300034820\|Ga0373959_0185233	Not Available	543	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.78%
Host-Associated	Host-Associated	22.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.40%
Plants	Host-Associated → Plants	22.22%
Aquatic	Environmental → Aquatic	14.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.03%
Sediment	Environmental → Aquatic → Sediment	6.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.54%
Marine	Environmental → Aquatic → Marine	5.23%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Peat	Environmental → Terrestrial → Peat	0.65%
Cave	Environmental → Terrestrial → Cave	0.65%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.65%
Floodplain	Environmental → Terrestrial → Floodplain	0.65%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.48%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Sand	Environmental → Terrestrial → Soil → Sand	1.96%
Lake	Environmental → Aquatic → Freshwater → Lake	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.58%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.65%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.54%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.58%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.31%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.65%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.65%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.65%
Speleothem And Rock Wall Surfaces	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces	0.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2209111007	Cave microbial community (Dry rock wall)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005878	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104	Environmental	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011410	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025962	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027947	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0671.00008100	2162886012	Miscanthus Rhizosphere	GALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR
2214531749	2209111007	Speleothem And Rock Wall Surfaces	LSRFVERSRSGQPVDALLQDLRADFGLGGLVLRDAVGRVLATAPPDTGSRPAPRVTLTSDTLFAAGDETPRYGSKGLRLPDGGGRLTLQTARGPVSLDLWEGNEDGFGLDESRTLAIAASMLGLGMR
INPhiseqgaiiFebDRAFT_1040129972	3300000364	Soil	REVSSLLQELRADFDLGGLVLRDQDGRVLAAAPEGAGSRPSPRMTLTADTLFAAEDDTQRFGSRGMRLPEGGGRLTLQTPRGPVTLDLWEGNEDGFGLDEARTLAVAASILGLGMR*
JGI11643J12802_100185851	3300000890	Soil	ALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
JGI24737J22298_100751581	3300001990	Corn Rhizosphere	GAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDXEGFTDDESRTLAIAASIVGLGMR*
C687J26623_100362032	3300002122	Soil	AVPGDAGTRPAPRMALSADTLFAAGDDSPRIGAKGLRLPEGGGRLTLQTAHGPVSLDLWEGSDQGFGRDEGRTLAIAASILGLGMR*
JGIcombinedJ26739_1002505292	3300002245	Forest Soil	TGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR*
JGI25612J43240_10267831	3300002886	Grasslands Soil	AAAPAGAGSRPVPRLALNSGTLFAVDDSSPRIGVKGLRLPEGGGRLTIQTARGPVSLDLWEGNGEGFGQDESRTLAIAASILGLGMR*
JGI25617J43924_100869382	3300002914	Grasslands Soil	PPRLALTGQMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR*
soilH1_103678021	3300003321	Sugarcane Root And Bulk Soil	GGGRAPARMLDELRTDFGLGGAVLRDGQGKVLAASPETAAALPAPRLPLTLEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTALCPATLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0055468_102911972	3300003993	Natural And Restored Wetlands	LLEDLRAEFGLGGLVLRDDQGHVLAAIPDTVEVLPPLRLTLTADTLFATSSETVRLGSKGIRLPEGGGRLRLQSAQGPVTLDLWEGNDAGFTSDESRTLAIAASILGLGMR*
Ga0055465_100167081	3300004013	Natural And Restored Wetlands	PLRLTLTADTLFATSSETVRLGSKGIRLPEGGGRLRLQSAQGPVTLDLWEGNDAGFTSDESRTLAIAASILGLGMR*
Ga0055498_100783061	3300004058	Natural And Restored Wetlands	LDGATLFAAGDESPRMGDNGLRLPEGGGRLTLQTPRGPVSLDLWEGNDRGFGRDESRTLAIAAAILGLGMR*
Ga0063356_1003804093	3300004463	Arabidopsis Thaliana Rhizosphere	RPAPRLALRSDTLFAVDDDSPRMGARGLRLPEGGGRLTLETARGAVSLDLWEGNEEGFGLDESRTLAISASLLGLGMR*
Ga0062595_1000204883	3300004479	Soil	DFGLGGAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0068995_100276612	3300005206	Natural And Restored Wetlands	DLGGLVLRDADGRVLAAVPADAGARPAPRMALDGATLFAAGDESPRMGDNGLRLPEGGGRLTLQTPRGPVSLDLWEGNDRGFGRDESRTLAIAAAILGLGMR*
Ga0065715_101467622	3300005293	Miscanthus Rhizosphere	GALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0070676_100835523	3300005328	Miscanthus Rhizosphere	RLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0070689_1004053242	3300005340	Switchgrass Rhizosphere	DFELGGAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0070669_1000694551	3300005353	Switchgrass Rhizosphere	RATVRMLEELRTDFGLGGAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0070673_1009934232	3300005364	Switchgrass Rhizosphere	TGLLEELRTDFGLGGAVLRDREGRVLAASPQTAEALPSPRLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTGRGPITLDLWEGDEEGFTDDESRTLAIAASIVGLGMR*
Ga0070667_1000947441	3300005367	Switchgrass Rhizosphere	RGGRATVRMLEELRTDFELGGAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0070701_101000461	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	SPQTAEALPSPRLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTGRGPITLDLWEGDEEGFTDDESRTLAIAASIVGLGMR*
Ga0070705_1001815281	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LRDDQGRVLAAVPDSAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR*
Ga0070705_1007246671	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LRDQSGRVLAATADAGTRPAPRIALDGATLFAVADESPRMGIKGLRLPEGGGRLTLQTPRGPVSLDLWEGNDQGFGLDESRTLAIAASILGLGMR*
Ga0070694_1010733302	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ADRELGSLTRLLERARGARAPAAMLRELQADFGLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR*
Ga0070708_1007431011	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	EDLRADFDLGGLVLRDGQGRVLAATPDTAVARPAPRLALTADTLFAPSGETVRFGSKGMRLPEGGGRLALPTARGPISLDLWEGNDEGFTDDESRTLAIATSILGLGMR*
Ga0068867_1000050097	3300005459	Miscanthus Rhizosphere	EELRTDFGLGGAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0070707_1003537482	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PDTAVARPAPRLALTADTLFAPSGETVRFGSKGMRLPEGGGRLALPTARGPISLDLWEGNDEGFTDDESRTLAIATSILGLGMR*
Ga0070707_1018412641	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR*
Ga0070697_1001436871	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ALTADTLFATGDETVRFGSRGMRLPEGGGRLTLKTARGPITLDLWEGNEEGFTADESRTLAIAASILGLGMR*
Ga0070696_1005656872	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RDDQGRVLAAVPDTAGALPPPRLALAGQMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDQDGFTDDESRTLAIAASILALGMR*
Ga0066700_110499461	3300005559	Soil	LTADTLFATGDEAVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGNEEGFTSDESRTLAIATSILALGMR*
Ga0075293_10679861	3300005875	Rice Paddy Soil	ALTADTLFATGDETVRFGSKGMRLPEGGGRLTLQTARGPITLDLWEGNADGFTADESRTLAIAASILGLGMR*
Ga0075300_10012211	3300005876	Rice Paddy Soil	RTDFGLRGLVLRDGQGRVLAAAPEDAGALPSPRLALTADTLFATGDETVRFGSKGMRLPEGGGRLTLQTARGPITLDLWEGNADGFTADESRTLAIAASILGLGMR*
Ga0075297_10108942	3300005878	Rice Paddy Soil	GGLVLRDGQARVLAATPFSAEALPPPRLALTPDTLFALGDETVRFGSKGMRLPEGGGRLTLRAARGPVTLDLWEGGDEGFTSDESRTLAIAASILGLGMR*
Ga0075299_10108111	3300005883	Rice Paddy Soil	RTDFGLGGLVLRDGQGRVLAAAPETARALPSPRLALTADTLFAAGDETVRFGSRGMRLPEGGGRLTLKTARGPITLDLWEGNEEGFTADESRTLAIAASILGLGMR*
Ga0075023_1000647852	3300006041	Watersheds	RSVDGLLQDLRADFGLGGLVLRDADGRVLAAAPDDARSRPAPRMALTADTLFAASDETQRFGTQGLRLPDGGGRLTLRTARGPVSLDLWEGSDEGFGLDESRTLAIAASVLGLGMR*
Ga0070715_102098031	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ARPAPRLALTADTLFAPSGETVRFGSKGMRLPEGGGRLALQTARGPISLDLWEGNDEGFTDDESRTLAIATSILGLGMR*
Ga0079222_100158111	3300006755	Agricultural Soil	VLRDGHGKVLAASPETAAALPAPQLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTALGPVTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0079222_101263951	3300006755	Agricultural Soil	LAATPDTAVARPAPRLALTADTLFAPSGETVRFGSKGMRLPEGGGRLALPTARGPISLDLWEGNDEGFTDDESRTLAIATSILGLGMR*
Ga0079221_114123511	3300006804	Agricultural Soil	PRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0075421_1023555792	3300006845	Populus Rhizosphere	EGRVLAASPQTAEALPSPRLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTGRGPITLDLWEGDEEGFTDDESRTLAIAASIVGLGMR*
Ga0075425_1003195022	3300006854	Populus Rhizosphere	ILTRLLQAARGGRATTGLLEELRTDFGLGGAVLRDGEGRVLAASPPTAEALPSPRLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTGRGPITLDLWEGDEEGFTDDESRTLAIAASIVGLGMR*
Ga0079219_100411021	3300006954	Agricultural Soil	DFDLGGLVLRDGQGHVLAATPDTAVARPVPRLALTADTLFAPSNETVRFGSKGMRLPEGGGRLALQTARGPIMLDLWEGNEEGFTDDESRTLAIATSILGLGMR*
Ga0099829_104298381	3300009038	Vadose Zone Soil	RAPAAMLQELRADFDLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGEMLFAPGDAMVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR*
Ga0099830_101631681	3300009088	Vadose Zone Soil	YARRGELALLEVAAVFGLGGLVLREAGGRVLAAVPEAATSRPAPRIGLTPDTLFAVEDETVRFGAKGMRLPDGGGRLPLQTRRGPVTLDLWEGDEQGFGRDESRTLAIAASILGLGMR*
Ga0099828_104324452	3300009089	Vadose Zone Soil	RDDQGRVLAAVPDTAGALPPPRLALTGEMLFAPGDAMVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR*
Ga0114129_109547141	3300009147	Populus Rhizosphere	LSRLVQRARSGREVSSLLQELRADFDLGGLVLRDQDARVFAPAPEGAGSRPSPRMTLTADTLFAAEDDTQRFGSRGMRLPEGGGRLTLQTARGPLTLDLWEGSEEGLRLDEARTLAVAASILALGMR*
Ga0105241_122344222	3300009174	Corn Rhizosphere	LAAAPAEAGSRPVPRLALNSGTLFAVDDASPRMGVKGLRLPEGGGRLTIQTARGPVSLDLWEGNDEGFGQDETRTLAIAASIVGLGMR*
Ga0105242_121892181	3300009176	Miscanthus Rhizosphere	VLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIATSILALGMR*
Ga0105249_104156232	3300009553	Switchgrass Rhizosphere	EASGRVLAAAPAEAGSRPVPRLALNSGTLFAVDDASPRMGVKGLRLPEGGGRLTIQTARGPVSLDLWEGNDEGFGQDETRTLAIAASIVGLGMR*
Ga0105249_106901761	3300009553	Switchgrass Rhizosphere	GEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0126373_122638701	3300010048	Tropical Forest Soil	ETLFAADEETVRFGTKGIRLPDGGGRLTLQSRRGPLSLDVWEGNTEGFGQDESRTLAIAASILGLGMR*
Ga0126377_119956142	3300010362	Tropical Forest Soil	GALVLREPGGSVLAAEPESAVSRPAPRVALSAETLFAAEEETVRFGTKGIRLPDGGGRLTLQSRRGPLTLDVWEGNTEGFGQDESRTLAIAASILGLGMR*
Ga0105239_101303553	3300010375	Corn Rhizosphere	LTRLLQAARGGRATTGLLEELRTDFGLGGAVLRDREGRVLAASPQTAEALPSPRLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTGRGPITLDLWEGDEEGFTDDESRTLAIAASIVGLGMR*
Ga0134122_102385451	3300010400	Terrestrial Soil	RVLAAAPETAGALPPPRLALTADTLFATGDETVRFGSKGMRLPEAGGRLTLQTARGPVTLDLWEGDQDGFTDDESRTLAIAASILALGMR*
Ga0134121_104809292	3300010401	Terrestrial Soil	GQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGGEDGFTDDQSRTLAIAASILALGMR*
Ga0137440_10030073	3300011410	Soil	RVLAAVPADVAARPAPRLVLDGATLFAAGDESPRFGVKGLRLPEGGGRLALQTGRGAMSLDLWEGNDQGFGRDESRTLAIAVSILGLGMR*
Ga0137426_12351882	3300011435	Soil	RVLAAVPADAAARPAPWLALDGATLFAAGDESPRFGVKGLRLPEGGGRLTLQTARGAVSLDLWEGNDQGFGLDESRTLAIAASILGLGMR*
Ga0137451_10251372	3300011438	Soil	MTLDGATLFAAGDESPRMGAKGLRLPEGGGRLTLQTARGPVSLDLWEGNDQGFGLDESRTLAIAASILGLGMR*
Ga0137445_10668041	3300012035	Soil	RPAASRRTSPPRSNSADLLQDLRAEFDLGGLVLRDAAGRVLAAVPADAGARPAPRMALDGATLFATGDESPRIGTKGLRLPEGGGRLTLQTARGPVSLDLWEGNDQGFGLDESRTLAIAASILGLGMR*
Ga0137388_102457002	3300012189	Vadose Zone Soil	GSLTRLLQRARGARAPAAMLQELRADFDLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGEMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR*
Ga0137378_104585761	3300012210	Vadose Zone Soil	IGLARIGRTPAGLLQDRRTDFGLGGLVLRGGQGRLLAAAPDTAGALSPPPLALTPDTLFATGDEAVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGNEEGFTSDESRTLAIATSILALGMR*
Ga0137358_101012481	3300012582	Vadose Zone Soil	QMLFAPGDAMVRFGGKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR*
Ga0137398_107468981	3300012683	Vadose Zone Soil	PPRLALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR*
Ga0157306_100190182	3300012912	Soil	SAASRPAPRIALDADTLFAPADDSPRFGSRGLRLPDGGGRLTLQTGRGPMTLDLWEGREDGLRLDEARTLAVAASILGLGMR*
Ga0157369_102569372	3300013105	Corn Rhizosphere	LRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0163162_125956502	3300013306	Switchgrass Rhizosphere	APRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0075342_11513141	3300014320	Natural And Restored Wetlands	GRVLAAVPAEAAARPAPRMALDGITLFAAGEETPRIGAKGLRLPEGGGRLTLQTAGGPVSLDLWEGNDQGFGLDESRTLAIAVSILGLGIR*
Ga0163163_102757842	3300014325	Switchgrass Rhizosphere	EMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0180066_11154892	3300014873	Soil	GLVLRDESGRVLAAVPADAGARPAPRMALDGATLFATGDESPRIGTKGLRLPEGGGRLTLQTARGAMSLDLWEGNDQGFGRDESRTLAIAASILGLGMR*
Ga0180094_11224112	3300014881	Soil	GRVLAAVPADATARPVPRMALDGATLFAAADESPRIGAKGLRLPEGGGRLTLQTARGPMSLDLWEGNDQGFGLDESRTLAIAASILGLGMR*
Ga0132256_1025629842	3300015372	Arabidopsis Rhizosphere	VLRDGQGRLLAAAPETAGALPPPRLALTTDTLFAPSDETVRFGSKGMRLPEAGGRLTLQTGRGPITLDLWEGNDEGFTGDESRTLAIAASILGLGMR*
Ga0132257_1003830302	3300015373	Arabidopsis Rhizosphere	GRVLAASPEAATSRPAPRISLDGHTLFAEAEESPRFGSRGLRLPDGGGRLALHTTQGPVTLDLWEGNEDGLRLDEARTLAVAASILGLGIR*
Ga0132255_1007146602	3300015374	Arabidopsis Rhizosphere	RMLEELRTDFGLGGAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR*
Ga0187824_102372791	3300017927	Freshwater Sediment	PRLALTTDTLFAPADETVRFGSKGMRLPEGGGRLALQTGRGPLTLDLWEGNDEGFTGDESRTLAIAASILGLGMR
Ga0187779_103654122	3300017959	Tropical Peatland	ARSRPAPHIALTADTLFAPGDDTVRFGAKGLRLPDGGGRLTLQTRRGPVALDLWEGDDAGFGSDESRTLAIAASILGLGMR
Ga0187776_100104484	3300017966	Tropical Peatland	FGLGGLILRDQGGRVLAAAPPEAGSRPAARMVLTADTLFAAEDETQRYGSRGLRLPAGGGRVTLQTARGPLTLDLWEGGEEGFRQDETLTLAIAASILGLGMR
Ga0187823_103716731	3300017993	Freshwater Sediment	MLESVHVPAPETAGALPPPRLALTTDTLFAPADETVRFGSKGMRLPEGGGRLALQTGRGPLTLDLWEGNDEGFTGDESRTLAIAASILGLGMR
Ga0187823_103958821	3300017993	Freshwater Sediment	LLILTRLLERARGGGTPVALLQDLRTDFGLGGLVLRDGQGRVLAAAPETAGVLTPPRLALTSDTLFAPSDETVRFGSKGMRLPEGGGRLTLQTARGPLTLDLWEGNEEGFTGDESRTLAIAASILGLGMR
Ga0184637_100443973	3300018063	Groundwater Sediment	VLAAVPEAATSRPAPRSRLTPDTLFAVEDETVRFGAKGMRLPDGGGRLTLQSRLGSVTLDLWEGDEQGFGRDESRTLAIAASILGLGMR
Ga0184640_100197203	3300018074	Groundwater Sediment	TPRLALSSDTLFAVDDVSPRIGAKGLRLPEGGGRLTLQTARGAVSLDLWEGNDQGFGQDESRTLAVAVSILGLGMR
Ga0190265_106285601	3300018422	Soil	LRDESGRLLAAVPAEAGTRPAPRMTLDGATLFAVGDASPRMGAKGLRLPEGGGRLMLRTARGSVSLDLWEGNDQGFSLDESRTLAIAVSILGLGMRIGSPG
Ga0187894_100482141	3300019360	Microbial Mat On Rocks	PAAAGARPAPRIALDGATLFAPGDENPRVGTRGLRLPDGGGRLTLHTARGLVSLDLWEGNDQGFGRDESRTLAIATAILGLRMR
Ga0137408_11067032	3300019789	Vadose Zone Soil	DVKTEFDLGGLVLREASGHVLAAAPAEAGSRPVPRLALNSGTLFAVDDASPRIGVKGLRLPEGGGRLTIQTARGPVSLDLWEGNGEGFGQDESRTLAIAASILGLGMR
Ga0193707_10160583	3300019881	Soil	GSLTRLLERTRGARAPAAMLQELRADFGLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0193755_11533671	3300020004	Soil	RSLEDLLQDVRTEFDLGGLVLREASGRVLAAAPAEAGSRPVPRLALNSGTLFAVDDASPRMGVKGLRLPEGGGRLTIQTARGPVSLDLWEGNDEGFGQDETRTLAIAASIVGLGMR
Ga0193740_10633721	3300020009	Soil	REASGHVLAAAPSDAGSRSTPRLALSSDTLFAVDDVSPRIGAKGLRLPEGGGRLTLQTARGAVSLDLWEGNDQGFGQDESRTLAIAVSLLGLGMR
Ga0206356_114038321	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	EELRTDFGLGGAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR
Ga0179596_106523932	3300021086	Vadose Zone Soil	LGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGEMLFAPGDAMVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR
Ga0210397_104079961	3300021403	Soil	LTPDTLFAPGDDTVRFGAKGLRLPDGGGRLTLQTGRGPISLDLWEGDDAGFGPDESRTLAIAASILGLGMR
Ga0210402_109047462	3300021478	Soil	APRIALTPDTLFAPGDDTVRFGAKGLRLPDGGGRLTLQTGRGPISLDLWEGDDAGFGPDESRTLAIAASILGLGMR
Ga0209109_100268503	3300025160	Soil	TLDGLLQDLRAEFDLGGLVLRDASGGVLAAVPGDAGTRPAPRMALSADTLFAAGDDSPRIGAKGLRLPEGGGRLTLQTAHGPVSLDLWEGSDQGFGRDEGRTLAIAASILGLGMR
Ga0210139_10073192	3300025558	Natural And Restored Wetlands	VSRHRDAPERRGSAITREGWQLRDEAGRVLAAVPADAVSRPAPRIALDGATLFAPADESPRFGVKGLRLPEGGGRLALQTGRGAVSLDVWEGNARGFGRDESRTLAIAASILGLGMR
Ga0210108_10093281	3300025560	Natural And Restored Wetlands	GLLQDLRAEFDLGGLVLRDEAGRVLAAVPADAVSRPAPRIALDGATLFAPADESPRFGVKGLRLPEGGGRLALQTGRGAVSLDVWEGNARGFGRDESRTLAIAASILGLGMR
Ga0210076_10164911	3300025567	Natural And Restored Wetlands	PLRLTLTADTLFATSSETVRLGSKGIRLPEGGGRLRLQSAQGPVTLDLWEGNDAGFTSDESRTLAIAASILGLGMR
Ga0207653_100216151	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	TGQMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR
Ga0207680_109984932	3300025903	Switchgrass Rhizosphere	FHILTRLLQAARGGRATVRMLEELRTDFGLGGAVLRDGEGRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR
Ga0207645_1000316612	3300025907	Miscanthus Rhizosphere	RLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR
Ga0207654_112588672	3300025911	Corn Rhizosphere	LAAAPAEAGSRPVPRLALNSGTLFAVDDASPRMGVKGLRLPEGGGRLTIQTARGPVSLDLWEGNDEGFGQDETRTLAIAASIVGLGMR
Ga0207671_101646071	3300025914	Corn Rhizosphere	GRVIAASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR
Ga0207693_105042912	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RPAPRLALTADTLFAPSGETVRFGSKGMRLPEGGGRLALQTARGPISLDLWEGNDEGFTDDESRTLAIATSILGLGMR
Ga0207657_100058231	3300025919	Corn Rhizosphere	FAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR
Ga0207709_114327332	3300025935	Miscanthus Rhizosphere	LIERARSGRAPAGLLEDLRTDFGLGGLVLRDGQGRVLAAAPENAGALPSPRLALTADTLFAAGDETVRFGSRGMRLPEGGGRLTLKTARGPITLDLWEGNEEGFTADESRTLAIAASILGLGMR
Ga0207712_104690182	3300025961	Switchgrass Rhizosphere	EASGRVLAAAPAEAGSRPVPRLALNSGTLFAVDDASPRMGVKGLRLPEGGGRLTIQTARGPVSLDLWEGNDEGFGQDETRTLAIAASIVGLGMR
Ga0210070_10077932	3300025962	Natural And Restored Wetlands	MARRYGWAFVTWLVLAAVPADAGARPAPRMALDGATLFAAGDESPRMGDNGLRLPEGGGRLTLQTPRGPVSLDLWEGNDRGFGRDESRTLAIAAAILGLGMR
Ga0207675_1001453133	3300026118	Switchgrass Rhizosphere	AASPETAGALPAPRLPLTGEMLFAPSEATVRFGRKGMRLPEGGGRLTLQTARGPLTLDLWEGDAEGFTDDESRTLAIAASIVGLGMR
Ga0257163_10777401	3300026359	Soil	QELGSLTRLLERARGARAPAAMLRELQADFGLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGQMLFAPSDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR
Ga0257171_10594042	3300026377	Soil	PLDGQLQDLRAEFDLGGLVLREASGRVLAAAPPDAGSRSTPRLALSSDTLFAVDDVGPRIGAKGLRLPEGGGRLTLQTARGAMSLDLWEGNDQGFGQDESRTLAIAVSLLGLGMR
Ga0257155_10642262	3300026481	Soil	DQELGSLTRLLERTRGARAPAAMLQELRADFGLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0257172_10640852	3300026482	Soil	ALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0257165_10001445	3300026507	Soil	RARGARAPAAMLRELQADFGLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGM
Ga0257161_10373891	3300026508	Soil	ARAPAAMLQELRADFGLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0257168_10430891	3300026514	Soil	VPDTAGALPPPRLALTGEMLFAPGDAMVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR
Ga0257158_10709902	3300026515	Soil	QGRVLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0209648_105333461	3300026551	Grasslands Soil	DGPPPLALTPDTLFATGDEAVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGNEEGFTSDESRTLAIATSILALGMR
Ga0209217_11169351	3300027651	Forest Soil	RPVPRLALTADTLFAPSDETVRFGSKGMRLPEGGGRLTLQTARGPVALDLWEGNEEGFTDDESRTLAIATSILGLGMR
Ga0209217_11838432	3300027651	Forest Soil	QELRADFGLGGLVLRDDQGRVLAAVPDTAGALPLPRLALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0209588_11383982	3300027671	Vadose Zone Soil	VLAAVPDTAGALPPPRLALTGQMLFAPSDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR
Ga0209074_102274842	3300027787	Agricultural Soil	RTDFGLGGLVLRDGQGRVLAAAPETAGALPPPRLALTTDTLFALADETVRFGSKGMRLPEGGGRLALQTARGPLTLDLWEGNEEGFTGDESRTLAIAASILGLGMR
Ga0209701_106592502	3300027862	Vadose Zone Soil	RDDFGLGGLVLREAGGRVLAAVPEAATSRPAPRIGLTPDTLFAVEDETVRFGAKGMRLPDGGGRLPLQTRRGPVTLDLWEGDEQGFGRDESRTLAIAASILGLGMR
Ga0209382_109613861	3300027909	Populus Rhizosphere	REGRVLAASPQTAEALPSPRLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTGRGPITLDLWEGDEEGFTDDESRTLAIAASIVGLGMR
Ga0209583_100680192	3300027910	Watersheds	MALTADTLFAASDETQRFGTQGLRLPDGGGRLTLRTARGPVSLDLWEGSDEGFGLDESRTLAIAASVLGLGMR
Ga0209868_10073301	3300027947	Groundwater Sand	GLVLREAGGRVLAAAPEAAASRPAPRIGLTPDTLFAVEDETVRFGAKGMRLPDGGGRLTLQSRLGSVTLDLWEGDEQGFGRDESRTLAIAASILGLGMR
Ga0209889_10191781	3300027952	Groundwater Sand	ADFGLGGLVLREAGGRVLAAAPEAAASRPAPRIGLTPDTLFAVEDETVRFGTKGMRLPDGGGRLTLQTRRGPVTFDLWEGDEQGFGRDESRTLAIAASILGLGMR
Ga0268264_103845283	3300028381	Switchgrass Rhizosphere	VLRDESGRVLAAVPAEAGARPAPRMTLDGATLFAVGDASPRMGAKGLRLPEGGGRLTLRTARGPVSLDLWEGNDQGFGLDESRTLAIAASILGLGMR
Ga0137415_101745293	3300028536	Vadose Zone Soil	RGARAPAAMLQELRADFDLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGEMLFAPGDAMVRFGSKGMRLPEGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR
Ga0247828_112470512	3300028587	Soil	AVDDLLQDLRAEFGLGGLVLRDESGRVLAAVPADAGSRPAPRLALDGATLFAAGDESPRFGNKGLRLPEGGGRLPLQTRRGAVSLDLWEGNDQGFGRDESRTLAIAASILGLGMR
Ga0247822_115033821	3300028592	Soil	APRLALDGATLFAAGDESPRFGNKGLRLPEGGGRLPLQTRRGAVSLDLWEGNDQGFGRDESRTLAIAASILGLGMR
Ga0307293_100034761	3300028711	Soil	LAAVPAEAGARPAPRMALDGATLFAVGDASPRMGAKGLRLPEGGGRLTLRTARGPVSLDLWEGNDQGFGLDESRTLAIAASILGLGMR
Ga0307280_102839262	3300028768	Soil	AMLQELHADFGLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGSKGMRLPDGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0307504_100294382	3300028792	Soil	RDADGRVLAAAPDDARSRPAPRMALTADTLFAASDETQRFGTQGLRLPDGGGRLTLRTARGPVSLDLWEGSDEGFGLDESRTLAIAASVLGLGMR
Ga0307504_101682172	3300028792	Soil	ALPLPRLALTGQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0307284_101849092	3300028799	Soil	GQMLFAPGDAMVRFGSKGMRLPEGGGRLALQTARGPVTLDLWEGDEDGFTDDESRTLAIAASILALGMR
Ga0247824_108828701	3300028809	Soil	DLLQDVKAEFELGGLVLREASGRVLAAAPAEAGSRPVPRLALNSGTLFAVDDASPRMGVKGLRLPEGGGRLTIQTARGPVSLDLWEGNDEGFGQDETRTLAIAASIVGLGMR
Ga0307292_102237412	3300028811	Soil	RVLAAVPAEAGARPAPRMALDGATLFAVGDASPRMGAKGLRLPDGGGRLTLRTTRGPVSLDLWEGNDQGFGLDESRTLAIAASILGLGMR
(restricted) Ga0255310_100882982	3300031197	Sandy Soil	RSGRSVQHQLEDLRDDFSLGGLVLRDAEGRVLAAAPEPSTSRPAPRIKVSPDTLFAVEDETVRFGAKGMRLPDGGGRLTLQTRRGPVTLDLWEGDEQGFGRDESRTLAIAASILGLGMR
Ga0307505_104510821	3300031455	Soil	FELGGLVVRDAGGRVLAAVPADAGARPAPRIALDGATLFAVDDESPRMGAKGLRLPEGGGRLTLQTARGPVSLDLWEGNDQGFGLDESRTLAIAVSVLGLGMR
Ga0310887_111286731	3300031547	Soil	ELGSLTRLLERTRGARAPAAMLQELRADFDLAGLVLRDDQGRVLAAVPDTAGALPPPRLALAGQMLFAPGDAMVRFGSKGMRLPDGGGRLTLQTARGPVTLDLWEGDQDGFTDDESRTLAIAASILALGMR
Ga0307478_110823871	3300031823	Hardwood Forest Soil	LGGLVLRDAGGRVLGAAPDDARSRPAPRIALTPDTLFAPGDDTVRFGAKGLRLPDGGGRLTLQTGRGPISLDLWEGDDVGFGPDESRTLAIAASILGLGMR
Ga0307479_100666621	3300031962	Hardwood Forest Soil	GLVLRDAGGRVLGAAPDDARSRPAPRIALTPDTLFAPGDDTVRFGAKGLRLPDGGGRLTLQTGRGPISLDLWEGDDAGFGPDESRTLAIAASILGLGMR
Ga0310899_105890951	3300032017	Soil	APRIALDADTLFAPADDSPRFGSRGLRLPDGGGRLTLQTGRGPVTLDLWEGREDGLRLDEARTLAVAASILGLGMR
Ga0307470_114277642	3300032174	Hardwood Forest Soil	TDFDLGGLVLRDGQGRVLAATPDTAVARPVPRLALTADTLFAPSNETVRFGSKGMRLPEGGGRLALQTARGPIMLDLWEGNEEGFTDDESRTLAIATSILGLGMR
Ga0307471_1001923323	3300032180	Hardwood Forest Soil	LQELRADFGLGGLVLRDDQGRVLAAVPDTAGALPPPRLALTGQMLFAPGDAMVRFGGKGMRLPDGGGRLTLQTARGPVTLDLWEGDEEGFTDDESRTLAIAASILALGMR
Ga0310812_103652581	3300032421	Soil	DLRADFGLGGLVLRDGQGRVLAAAPETAGALPPPRLALTTDTLFAPSDGTVRFGSKGMRLPEGGGRLALQTTRGPLTLDVWEGNDEGFTGDESRTLAIAASILGLGMR
Ga0335069_105343231	3300032893	Soil	RSVRETGSLLEDLRGDFDLGGLVLRDQSGRVLAAAPEAAGSRPAPRMNLTADTLFAAADDTQRFGSRGLRLPDGGGRLTLQTARGPVTLDLWEGNEEGFRQDEARTLAIAASILGLGMR
Ga0334722_105067031	3300033233	Sediment	RVLAAVPAEAGARPAPRLALDGATLFAVDDESPRFGEKGLRLPEGGGRLALQTRRGPVSLDLWEGSDQGFGRDESRTLAIAASILGLGMR
Ga0326731_10262822	3300033502	Peat Soil	ERARGGRTPAALLQDLRTDFGLGGLVLRDGQGRVLAATPDTASALPTPRLALTADTLFAPADETVRFGSKGMRLPEGGGRLTLQTARGPLTLDLWEGNEEGFTGDESRTLAIAASLLGLGMR
Ga0247830_101160881	3300033551	Soil	VRRLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTGRGPITLDLWEGDEEGFTDDESRTLAIAASIVGLGMR
Ga0247830_101440311	3300033551	Soil	VDDLLQDLRAEFGLGGLVLRDESGRVLAAVPADAGSRPAPRLALDGATLFAAGDESPRFGNKGLRLPEGGGRLPLQTRRGAVSLDLWEGNDQGFGRDESRTLAIAASILGLGMR
Ga0364934_0223616_89_358	3300034178	Sediment	VLAAAPSDAGSRPTPRLALSSDTLFAVDDVSPRIGAKGLRLPEGGGRLTLQTARGAVSLDLWEGNDQGFGQDESRTLAIAVSLLGLGMR
Ga0373959_0185233_169_543	3300034820	Rhizosphere Soil	LLQAARGGRATTGLLEELRTDFGLGGAVLRDREGRVLAASPQTAEALPSPRLPLTGEMLFAPGDALVRFGRKGMRLPEGGGRLTLQTGRGPITLDLWEGDEEGFTDDESRTLAIAASIVGLGMR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters