Metagenome / Metatranscriptome Family F044475

Overview

Basic Information

• Family ID: F044475
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 154
• Average Sequence Length: 63 residues
• Representative Sequence: MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
• Number of Associated Samples: 137
• Number of Associated Scaffolds: 154

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 66.23 %
• % of genes near scaffold ends (potentially truncated): 30.52 %
• % of genes from short scaffolds (< 2000 bps): 78.57 %
• Associated GOLD sequencing projects: 123
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (55.195 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (11.039 % of family members)
• Environment Ontology (ENVO): Unclassified (28.571 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (50.649 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 26.37%
  β-sheet: 0.00%
  Coil/Unstructured: 73.63%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF01476	LysM	27.27
PF01546	Peptidase_M20	5.84
PF00975	Thioesterase	5.84
PF12697	Abhydrolase_6	4.55
PF07452	CHRD	3.90
PF04392	ABC_sub_bind	3.90
PF09209	CecR_C	3.25
PF07819	PGAP1	1.30
PF13185	GAF_2	0.65
PF08240	ADH_N	0.65
PF02518	HATPase_c	0.65
PF16901	DAO_C	0.65
PF05638	T6SS_HCP	0.65
PF13641	Glyco_tranf_2_3	0.65
PF00248	Aldo_ket_red	0.65
PF00160	Pro_isomerase	0.65
PF07750	GcrA	0.65
PF01494	FAD_binding_3	0.65
PF07786	HGSNAT_cat	0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.90
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.30
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.30
COG1075	Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold	Lipid transport and metabolism [I]	1.30
COG2267	Lysophospholipase, alpha-beta hydrolase superfamily	Lipid transport and metabolism [I]	1.30
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.65
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.65
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.65
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.65
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	0.65
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.65

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
All Organisms	root	All Organisms	44.81 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
cellular organisms	root	All Organisms → cellular organisms	44.81 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.81 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.82 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.17 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.78 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.84 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	4.55 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.84 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	4.55 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	4.55 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.55 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.19 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	4.55 %
Bradyrhizobium sp. dw_78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	2.60 %
Bradyrhizobium sp. sBnM-33	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	1.95 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2088090015|GPICI_9283541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1043
2162886007|SwRhRL2b_contig_1420652	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298
3300000033|ICChiseqgaiiDRAFT_c0880698	Not Available	2806
3300000156|NODE_c0456791	Not Available	886
3300000890|JGI11643J12802_10786938	Not Available	1160
3300000891|JGI10214J12806_12075673	Not Available	1298
3300001990|JGI24737J22298_10009209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3291
3300003324|soilH2_10213268	All Organisms → cellular organisms → Bacteria	4656
3300003324|soilH2_10350391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1894
3300003371|JGI26145J50221_1033753	Not Available	529
3300003659|JGI25404J52841_10092040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	634
3300003911|JGI25405J52794_10033225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	1076
3300003994|Ga0055435_10010257	Not Available	1765
3300004058|Ga0055498_10002554	All Organisms → cellular organisms → Bacteria	1835
3300004114|Ga0062593_100518180	Not Available	1111
3300004114|Ga0062593_102587449	Not Available	576
3300004156|Ga0062589_100413706	Not Available	1101
3300004156|Ga0062589_101855355	Not Available	607
3300004479|Ga0062595_100003298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4220
3300004643|Ga0062591_100540048	Not Available	1013
3300004643|Ga0062591_102619632	Not Available	532
3300005093|Ga0062594_100040492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2267
3300005103|Ga0066813_1000866	Not Available	1025
3300005158|Ga0066816_1009852	Not Available	693
3300005164|Ga0066815_10031759	Not Available	798
3300005168|Ga0066809_10007443	Not Available	1976
3300005327|Ga0070658_10654690	Not Available	911
3300005331|Ga0070670_100154221	All Organisms → cellular organisms → Bacteria	1989
3300005332|Ga0066388_100406880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2005
3300005332|Ga0066388_102573148	Not Available	926
3300005337|Ga0070682_100222997	Not Available	1343
3300005340|Ga0070689_100321367	Not Available	1292
3300005344|Ga0070661_101107998	Not Available	660
3300005355|Ga0070671_100335500	Not Available	1289
3300005367|Ga0070667_101011330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776
3300005438|Ga0070701_10000795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11288
3300005440|Ga0070705_101485046	Not Available	567
3300005458|Ga0070681_11366173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	632
3300005529|Ga0070741_10004486	All Organisms → cellular organisms → Bacteria	32540
3300005535|Ga0070684_102012671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	545
3300005544|Ga0070686_100429573	Not Available	1011
3300005548|Ga0070665_100147013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2360
3300005564|Ga0070664_100594787	All Organisms → cellular organisms → Bacteria	1026
3300005615|Ga0070702_100000071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28864
3300005616|Ga0068852_100924933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	890
3300005713|Ga0066905_100103728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1938
3300005764|Ga0066903_101671819	Not Available	1211
3300005937|Ga0081455_10000036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	136303
3300006579|Ga0074054_11764948	Not Available	644
3300006581|Ga0074048_13224507	Not Available	765
3300006755|Ga0079222_11334502	Not Available	657
3300006806|Ga0079220_10084510	Not Available	1603
3300006871|Ga0075434_101898819	Not Available	601
3300006954|Ga0079219_10207566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1118
3300006954|Ga0079219_11056551	Not Available	682
3300009094|Ga0111539_10026368	All Organisms → cellular organisms → Bacteria	7106
3300009094|Ga0111539_11216099	Not Available	875
3300009098|Ga0105245_11025254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870
3300010043|Ga0126380_11949723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536
3300010046|Ga0126384_10711646	Not Available	891
3300010047|Ga0126382_10715647	Not Available	842
3300010048|Ga0126373_10023894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5205
3300010358|Ga0126370_10012742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4573
3300010359|Ga0126376_12309496	Not Available	584
3300010362|Ga0126377_10095125	All Organisms → cellular organisms → Bacteria	2706
3300010362|Ga0126377_11683302	Not Available	709
3300010373|Ga0134128_10723343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1105
3300010403|Ga0134123_10536850	Not Available	1110
3300012499|Ga0157350_1028660	Not Available	606
3300012501|Ga0157351_1063312	Not Available	514
3300012513|Ga0157326_1003406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1675
3300012902|Ga0157291_10000944	All Organisms → cellular organisms → Bacteria	3227
3300012903|Ga0157289_10122489	Not Available	771
3300012904|Ga0157282_10000570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4679
3300012906|Ga0157295_10006032	All Organisms → cellular organisms → Bacteria	1958
3300012909|Ga0157290_10033660	All Organisms → cellular organisms → Bacteria	1224
3300012914|Ga0157297_10002060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3952
3300012948|Ga0126375_10005500	All Organisms → cellular organisms → Bacteria	4861
3300012948|Ga0126375_11997916	Not Available	512
3300012958|Ga0164299_10434427	Not Available	854
3300012984|Ga0164309_11923487	Not Available	507
3300013297|Ga0157378_10960644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887
3300013308|Ga0157375_10061534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3728
3300015371|Ga0132258_10101807	All Organisms → cellular organisms → Bacteria	6770
3300015371|Ga0132258_12130499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1409
3300015374|Ga0132255_100398190	Not Available	2004
3300017939|Ga0187775_10005422	All Organisms → cellular organisms → Bacteria	3084
3300017959|Ga0187779_10000192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	45160
3300017966|Ga0187776_10001617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11371
3300019356|Ga0173481_10123614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1030
3300019356|Ga0173481_10190341	Not Available	881
3300021560|Ga0126371_10022122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5877
3300022737|Ga0247747_1001041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	2833
3300022893|Ga0247787_1005315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_78	1471
3300022899|Ga0247795_1007803	All Organisms → cellular organisms → Bacteria	1710
3300023057|Ga0247797_1036394	Not Available	680
3300023077|Ga0247802_1015445	Not Available	1039
3300023168|Ga0247748_1030012	Not Available	784
3300024187|Ga0247672_1087894	Not Available	539
3300025315|Ga0207697_10341241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	665
3300025912|Ga0207707_10809021	Not Available	780
3300025917|Ga0207660_11569261	Not Available	531
3300025919|Ga0207657_11099975	Not Available	607
3300025927|Ga0207687_10261356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1380
3300025931|Ga0207644_10431829	Not Available	1080
3300025932|Ga0207690_10030985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3418
3300025932|Ga0207690_11771770	Not Available	516
3300025941|Ga0207711_10094640	Not Available	2633
3300025945|Ga0207679_10094548	Not Available	2321
3300025960|Ga0207651_10862563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	805
3300025972|Ga0207668_10244862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1453
3300025972|Ga0207668_11027753	Not Available	737
3300026035|Ga0207703_10303219	Not Available	1457
3300026067|Ga0207678_11467575	Not Available	602
3300026095|Ga0207676_11228106	Not Available	743
3300026452|Ga0256821_1002998	Not Available	1504
3300026873|Ga0207620_1005189	All Organisms → cellular organisms → Bacteria	888
3300026903|Ga0207462_1006207	Not Available	532
3300026952|Ga0207434_1001686	All Organisms → cellular organisms → Bacteria	1531
3300027400|Ga0207560_100137	All Organisms → cellular organisms → Bacteria	1498
3300027401|Ga0208637_1010133	All Organisms → cellular organisms → Bacteria	948
3300027402|Ga0207465_100338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	838
3300027411|Ga0207519_104677	Not Available	577
3300027424|Ga0209984_1004923	Not Available	1588
3300027447|Ga0207622_101449	Not Available	642
3300027476|Ga0207514_101434	Not Available	740
3300027481|Ga0207459_101553	Not Available	836
3300027523|Ga0208890_1032924	Not Available	786
3300027526|Ga0209968_1109086	Not Available	507
3300027560|Ga0207981_1001745	All Organisms → cellular organisms → Bacteria	3882
3300027560|Ga0207981_1002450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3324
3300027617|Ga0210002_1009024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1522
3300027717|Ga0209998_10107604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	695
3300027765|Ga0209073_10027272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1741
3300027775|Ga0209177_10264412	Not Available	641
3300027876|Ga0209974_10444079	Not Available	514
3300027907|Ga0207428_11281878	Not Available	508
3300028809|Ga0247824_10382610	Not Available	809
(restricted) 3300031150|Ga0255311_1010193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1887
(restricted) 3300031197|Ga0255310_10064864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	961
3300031547|Ga0310887_10049007	Not Available	1885
3300031740|Ga0307468_100757649	Not Available	821
3300031858|Ga0310892_10390052	Not Available	904
3300031892|Ga0310893_10315782	Not Available	665
3300031908|Ga0310900_10827521	Not Available	751
3300031944|Ga0310884_10065323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1683
3300032013|Ga0310906_10386558	Not Available	921
3300032174|Ga0307470_10623529	Not Available	810
3300032174|Ga0307470_10663217	Not Available	789
3300032179|Ga0310889_10248591	Not Available	842
3300032205|Ga0307472_100127567	Not Available	1813
3300032205|Ga0307472_100279609	Not Available	1328
3300034817|Ga0373948_0000690	All Organisms → cellular organisms → Bacteria	4391
3300034817|Ga0373948_0009354	Not Available	1688

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.48%
Host-Associated	Host-Associated	29.87%
Engineered	Engineered	0.65%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.53%
Plants	Host-Associated → Plants	29.87%
Aquatic	Environmental → Aquatic	1.95%
Solid Waste	Engineered → Solid Waste	0.65%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.34%
Marine	Environmental → Aquatic → Marine	1.30%
Freshwater	Environmental → Aquatic → Freshwater	0.65%
Grass	Engineered → Solid Waste → Grass	0.65%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.74%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.95%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.30%
Sand	Environmental → Terrestrial → Soil → Sand	1.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.65%
Composting	Engineered → Solid Waste → Grass → Composting	0.65%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	20.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.95%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.30%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.30%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.65%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	11.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.25%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.95%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.30%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.30%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.30%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.30%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.30%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.30%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.65%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated
3300003324	Sugarcane bulk soil Sample H2	Environmental
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental
3300026873	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-12 (SPAdes)	Environmental
3300026903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A1-11 (SPAdes)	Environmental
3300026952	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)	Environmental
3300027400	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4-11 (SPAdes)	Environmental
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental
3300027402	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A3-12 (SPAdes)	Environmental
3300027411	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-12 (SPAdes)	Environmental
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated
3300027447	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K4-12 (SPAdes)	Environmental
3300027476	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08.2A5-11 (SPAdes)	Environmental
3300027481	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A2-12 (SPAdes)	Environmental
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02818530	2088090015	Soil	MPLLAYFVVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNPVA
SwRhRL2b_0126.00003270	2162886007	Switchgrass Rhizosphere	MPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAV
ICChiseqgaiiDRAFT_08806981	3300000033	Soil	MRMPLLAYFVVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNPVAE*
NODE_04567913	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGAVNSAVE*
JGI11643J12802_107869381	3300000890	Soil	MPLLAYFVVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNPVAE*
JGI10214J12806_120756732	3300000891	Soil	RMPLLAYFLVMGIILFSGLILVSSQLESKSLAVSQRIGVPPPFKAQPDANGSPAGTVNPVAE*
JGI24737J22298_100092096	3300001990	Corn Rhizosphere	MRMPLLAYFLVMGIILFTGLVXVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
soilH2_102132682	3300003324	Sugarcane Root And Bulk Soil	MRMPILPYVLVVGALLFGVLVLVSGHLESKPLAVSQRIGVPPPFKAAPDANGSPASTVSAATE*
soilH2_103503914	3300003324	Sugarcane Root And Bulk Soil	MRMPILGYFLIVGALLFGGLVLISSQLQSRPLPVSQKLGVPAPFKAAPDANGSPAMGLSRAVED*
JGI26145J50221_10337532	3300003371	Arabidopsis Thaliana Rhizosphere	MPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE*
JGI25404J52841_100920402	3300003659	Tabebuia Heterophylla Rhizosphere	MRMPILAYFLVMGTILFGGLVLVSSQLESKPLAVSQRIGVPAPFKAPPDANESATGVVDPVAE*
JGI25405J52794_100332252	3300003911	Tabebuia Heterophylla Rhizosphere	MRMPLLAYFLVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAPPDANGSPVGAINSAVEQ*
Ga0055435_100102572	3300003994	Natural And Restored Wetlands	MRMPLLAYFLVMGILLFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0055498_100025543	3300004058	Natural And Restored Wetlands	MPLLVYFLVMGILLFTGLALVSSRLESRSLPVSQRIGVPPPFKAPPDANGSLAGTVNSAVE*
Ga0062593_1005181802	3300004114	Soil	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVAPVNPAVE*
Ga0062593_1025874492	3300004114	Soil	MPLLAYFLVMGIILFSGLILVSSQLESKSLAVSQRIGVPPPFKAQPDANGSPAGTVNPVAE*
Ga0062589_1004137061	3300004156	Soil	MPLLAYFLVMGIVLFTGLILVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGAVNPAVE*
Ga0062589_1018553552	3300004156	Soil	MPLLAYFLVMGILLFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0062595_1000032981	3300004479	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVAPVNPAVE*
Ga0062591_1005400482	3300004643	Soil	LEKSMRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVAPVNPAVE*
Ga0062591_1026196322	3300004643	Soil	MRMPLLAYFLVMGIILFSGLILVSSQLESKSLAVSQRIGVPPPFKAQPDANGSPAGTVNPVAE*
Ga0062594_1000404924	3300005093	Soil	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVATVNPAVE*
Ga0066813_10008662	3300005103	Soil	MRMPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0066816_10098521	3300005158	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0066815_100317592	3300005164	Soil	MRMPLLAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVTPAIE*
Ga0066809_100074433	3300005168	Soil	MRMPLLAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSTVE*
Ga0070658_106546902	3300005327	Corn Rhizosphere	AYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE*
Ga0070670_1001542214	3300005331	Switchgrass Rhizosphere	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVAT
Ga0066388_1004068803	3300005332	Tropical Forest Soil	MRMPVFAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPTPFKAPPAANGSLADVVDPATTTR*
Ga0066388_1025731481	3300005332	Tropical Forest Soil	MRMPVLAYFLVMGMILFGGLALASGQLESKPLAVTQRIGVPAPFKAPQDANRSPVNAVDPAATAK*
Ga0070682_1002229972	3300005337	Corn Rhizosphere	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGAVNSAVE*
Ga0070689_1003213672	3300005340	Switchgrass Rhizosphere	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0070661_1011079981	3300005344	Corn Rhizosphere	MRMPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSP
Ga0070671_1003355002	3300005355	Switchgrass Rhizosphere	RVCLEKSMRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVATVNPAVE*
Ga0070667_1010113302	3300005367	Switchgrass Rhizosphere	FFVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFNAPPDANRSPVNAVDPAATTR*
Ga0070701_1000079514	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRMPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE*
Ga0070705_1014850462	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVATVNPAVE*
Ga0070681_113661732	3300005458	Corn Rhizosphere	EKSMRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGAVNSAVE*
Ga0070741_1000448628	3300005529	Surface Soil	MRMPILPYVLVVGTLLFGVLVFVSGQLESKPLPVSQRVGVPPPFKAVPDANGSLAGAVSSAAE*
Ga0070684_1020126711	3300005535	Corn Rhizosphere	NLASAGLFGEIDANALLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVAPVNPAVE*
Ga0070686_1004295732	3300005544	Switchgrass Rhizosphere	VCLEKSMRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVATVNPAVE*
Ga0070665_1001470132	3300005548	Switchgrass Rhizosphere	LVEGFSLEQIVMRMPVLAYFFVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFNAPPDANRSPVNAVDPAATTR*
Ga0070664_1005947873	3300005564	Corn Rhizosphere	MPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0070702_10000007123	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRMPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNS
Ga0068852_1009249333	3300005616	Corn Rhizosphere	PLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0066905_1001037285	3300005713	Tropical Forest Soil	MRMPLLAYFLVMGIILFSGLILVSGQLESKSLPVSQRIGVPPPFKAPPDANGSPAGTMNSAVEQ*
Ga0066903_1016718191	3300005764	Tropical Forest Soil	MPLLAYFLVMGIILFSGLVLVSGQLESKSLPVSQRIGVPPPFKAPPDANGSPAGSMNPGVE*
Ga0081455_1000003693	3300005937	Tabebuia Heterophylla Rhizosphere	MPLLAYFLVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAPPDANGSPVGAINSAVEQ*
Ga0074054_117649482	3300006579	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSTVE*
Ga0074048_132245071	3300006581	Soil	LLAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSTVE*
Ga0079222_113345021	3300006755	Agricultural Soil	MPLLAYFLVMGIILFAGLVLVSGQLESKSLPVSQRIGVPPPFKAPPDANGSPAATTNSAVE*
Ga0079220_100845104	3300006806	Agricultural Soil	MRMPIFAYFLVMGITLFGGLILLSTQLESKPLAVSQRIGVPPPFKAAPDANGSPAVVIEPAAE*
Ga0075434_1018988191	3300006871	Populus Rhizosphere	LVEGRILEQIVMRMPVLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPDANRSPVNAVDPAATTK*
Ga0079219_102075661	3300006954	Agricultural Soil	MPILGYFLIVGALLFGGLVLISSQLQSRPLPVSQKLGVPAPFKAAPDANGSPAMGLSRAVED*
Ga0079219_110565511	3300006954	Agricultural Soil	AYFLVMGITLFGGLILLSTQLESKPLAVSQRIGVPPPFKAAPDANGSPAVVIEPAAE*
Ga0111539_100263686	3300009094	Populus Rhizosphere	MPLLAYFLVMGILLFTGLVLVSGQLESKSLPVSQRVGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0111539_112160992	3300009094	Populus Rhizosphere	LVEGFSLEQIVMPMPVLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPNTNRSTVDAVDPSKK*
Ga0105245_110252542	3300009098	Miscanthus Rhizosphere	FSLEQIVMPMPVLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFNAPPDANRSPVNAVDPAATTR*
Ga0126380_119497232	3300010043	Tropical Forest Soil	AYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPQDANRSPVNAVDPAATTK*
Ga0126384_107116461	3300010046	Tropical Forest Soil	LVEGLILKQIVMRMPVFAYFLVMGMILFGGLALASGQLESKPLAVTQRIGVPAPFKAPQDANRSPVNAVDPAATTK*
Ga0126382_107156472	3300010047	Tropical Forest Soil	LVEGFSLEQIVMRMPVLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPQDANRSPVNAVDPAATTK*
Ga0126373_100238945	3300010048	Tropical Forest Soil	MRMPVLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPTPFKAPPAANGSLADAVDPATTTR*
Ga0126370_100127425	3300010358	Tropical Forest Soil	MRMPVFAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPTPFKAPPAANGSLADAVDPATTTG*
Ga0126376_123094961	3300010359	Tropical Forest Soil	LVEGLILEQIVMRMPVFAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPTPFKAPPAANGSLADVVDPATTTR*
Ga0126377_100951255	3300010362	Tropical Forest Soil	MRMPLFAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAPPDANGSSASTMSSAVE*
Ga0126377_116833021	3300010362	Tropical Forest Soil	MRMPVLGYFLVVGALLFGGLVLVSGQLQSRPLSVSQRIGVPAPFKAAPDANGSPATATTPAE*
Ga0134128_107233433	3300010373	Terrestrial Soil	LVEGFSLEQIVMPMPVLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPDANRSPVNAVDPAATTK*
Ga0134123_105368502	3300010403	Terrestrial Soil	LVEGFSLEQIVMRMPVLAYFFVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPDANRSPVNAVDPAATTK*
Ga0157350_10286601	3300012499	Unplanted Soil	MGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0157351_10633121	3300012501	Unplanted Soil	MPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPTPFKAQPDANGSPAGTVNSAVE*
Ga0157326_10034062	3300012513	Arabidopsis Rhizosphere	MPLLDYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0157291_100009446	3300012902	Soil	MPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE*
Ga0157289_101224892	3300012903	Soil	GIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0157282_100005702	3300012904	Soil	MRMPLLAYFLAMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE*
Ga0157295_100060321	3300012906	Soil	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSP
Ga0157290_100336603	3300012909	Soil	MPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDAN
Ga0157297_100020601	3300012914	Soil	MRMPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVLPPFKAQPDANGSPVGTVDSVVE*
Ga0126375_100055005	3300012948	Tropical Forest Soil	MPLLAYFLVMGIILFSGLILVSGQLESKSLPVSQRIGVPPPFKAPPDANGSPAGTMNSAVEQ*
Ga0126375_119979161	3300012948	Tropical Forest Soil	MPLLAYFLVMGIILFSGLVLVSSQLESKSLAVSQRIGVPPPFKAAPDANGSSAGTTDSGVEQ*
Ga0164299_104344272	3300012958	Soil	ENSMRMPLLAYFLAMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE*
Ga0164309_119234871	3300012984	Soil	LVEGLILEQIVMRMPVLVYFLGMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPDANRSPVNAVDPAATTK*
Ga0157378_109606442	3300013297	Miscanthus Rhizosphere	EGFSLEQIVMRMPVLGYLFVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFNAPPDANRSPVNAVDPAATTR*
Ga0157375_100615345	3300013308	Miscanthus Rhizosphere	MRMPVLAYFFVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFNAPPDANRSPVNAVDPAATTK*
Ga0132258_101018078	3300015371	Arabidopsis Rhizosphere	MPLVAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAPPDANGSPAGAMNSVAE*
Ga0132258_121304992	3300015371	Arabidopsis Rhizosphere	MPLLAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSTVE*
Ga0132255_1003981904	3300015374	Arabidopsis Rhizosphere	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAATVNPAVE*
Ga0187775_100054222	3300017939	Tropical Peatland	MRMPILSYFLVMGAILFGGLVLVSSQLESKPLLVSQRIGVPPPFKAAPDANGSPAPVVDPVNE
Ga0187779_1000019234	3300017959	Tropical Peatland	MRMPILTYFLVMGALLFGGLLFLSSHLESKPLPVSQRIGVPAPFKALPDANGSPTSDNVQ
Ga0187776_1000161716	3300017966	Tropical Peatland	MPILSYFLVMGAILFGGLVLVSSQLESKPLLVSQRIGVPPPFKAAPDANGSPAPVVDPVN
Ga0173481_101236142	3300019356	Soil	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAV
Ga0173481_101903411	3300019356	Soil	MRMPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0126371_100221225	3300021560	Tropical Forest Soil	MRMPVFAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPTPFKAPPAANGSLADVVDPATTTR
Ga0247747_10010413	3300022737	Soil	MRMPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE
Ga0247787_10053153	3300022893	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0247795_10078031	3300022899	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVN
Ga0247797_10363941	3300023057	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGT
Ga0247802_10154452	3300023077	Soil	LVENSMRMPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE
Ga0247748_10300121	3300023168	Soil	MGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0247672_10878941	3300024187	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVATVNPAVE
Ga0207697_103412412	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVATVNPAV
Ga0207707_108090211	3300025912	Corn Rhizosphere	LLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0207660_115692612	3300025917	Corn Rhizosphere	MRMPLLAYFLVMGIILFSGLILVSSQLESKSLAVSQRIGVPPPSKAQPDANGSPAGTVNPVAE
Ga0207657_110999752	3300025919	Corn Rhizosphere	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVAPVNPAV
Ga0207687_102613561	3300025927	Miscanthus Rhizosphere	VLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPDANRSPVNAVDPAATT
Ga0207644_104318291	3300025931	Switchgrass Rhizosphere	RVCLEKSMRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVATVNPAVE
Ga0207690_100309851	3300025932	Corn Rhizosphere	GIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0207690_117717701	3300025932	Corn Rhizosphere	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGAVNSAV
Ga0207711_100946402	3300025941	Switchgrass Rhizosphere	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVAPVNPAVE
Ga0207679_100945482	3300025945	Corn Rhizosphere	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGAVNSAVE
Ga0207651_108625631	3300025960	Switchgrass Rhizosphere	MRMPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANG
Ga0207668_102448623	3300025972	Switchgrass Rhizosphere	LVEGFSLEQIVMPMPVLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPDANRSPVNAVDPAATTK
Ga0207668_110277532	3300025972	Switchgrass Rhizosphere	MPLLAYFLVMGILLFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAV
Ga0207703_103032192	3300026035	Switchgrass Rhizosphere	VMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0207678_114675752	3300026067	Corn Rhizosphere	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGAVNSAV
Ga0207676_112281062	3300026095	Switchgrass Rhizosphere	LVEGFSLEQIVMRMPVLAYFFVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFNAPPDANRSPVNAVDPAATTR
Ga0256821_10029985	3300026452	Sediment	MPLLAYFLVIGILLFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAV
Ga0207620_10051891	3300026873	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGS
Ga0207462_10062071	3300026903	Soil	FLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE
Ga0207434_10016862	3300026952	Soil	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVV
Ga0207560_1001372	3300027400	Soil	MPLLAYFLAMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVV
Ga0208637_10101333	3300027401	Soil	MRMPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTV
Ga0207465_1003383	3300027402	Soil	MRMPLLAYFLVMGIILFTGLVLVSSQLESKSLPVSQRIGVLPPFKAQPDANGSPVGTVDSVVE
Ga0207519_1046772	3300027411	Soil	MPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAV
Ga0209984_10049232	3300027424	Arabidopsis Thaliana Rhizosphere	MPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNPVA
Ga0207622_1014491	3300027447	Soil	MRMPLLAYFLVMGILLFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE
Ga0207514_1014342	3300027476	Soil	AYFLVMGIILFTGLVFVSGQLETKWLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE
Ga0207459_1015531	3300027481	Soil	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSP
Ga0208890_10329241	3300027523	Soil	GIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSTVE
Ga0209968_11090861	3300027526	Arabidopsis Thaliana Rhizosphere	MRMPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPTGAVNSAVE
Ga0207981_10017451	3300027560	Soil	MPLLAYFLVMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSA
Ga0207981_10024507	3300027560	Soil	MRMPLLAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSTVE
Ga0210002_10090241	3300027617	Arabidopsis Thaliana Rhizosphere	MPLLAYFLVMGIILITGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPTGAVNSAV
Ga0209998_101076041	3300027717	Arabidopsis Thaliana Rhizosphere	ISSEKSMRMPLLAYFVVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNPVAE
Ga0209073_100272722	3300027765	Agricultural Soil	MRMPILGYFLIVGALLFGGLVLISSQLQSRPLPVSQKLGVPAPFKAAPDANGSPAMGLSRAVED
Ga0209177_102644121	3300027775	Agricultural Soil	LVMGITLFGGLILLSTQLESKPLAVSQRIGVPPPFKAAPDANGSPAVVIEPAAE
Ga0209974_104440791	3300027876	Arabidopsis Thaliana Rhizosphere	MRMPLLAYFVVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNPVAE
Ga0207428_112818782	3300027907	Populus Rhizosphere	MPLLAYFLVMGILLFTGLVLVSGQLESKSLPVSQRVGVPPPFKAQPDANGSPAGTVNSAV
Ga0247824_103826102	3300028809	Soil	MRMPLLAYFLVMGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSVVE
(restricted) Ga0255311_10101932	3300031150	Sandy Soil	MRMPILAYFLVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNPAAE
(restricted) Ga0255310_100648641	3300031197	Sandy Soil	MRMPLLAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0310887_100490074	3300031547	Soil	YFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVVE
Ga0307468_1007576491	3300031740	Hardwood Forest Soil	MRMPLLAYFLVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAFPDANGSPAGTMNSAVEQ
Ga0310892_103900521	3300031858	Soil	LVEGRILEQIVMRMPVLAYFLVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPDTNK
Ga0310893_103157821	3300031892	Soil	MPLLAYFLVMGIILFSGLILVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSTV
Ga0310900_108275211	3300031908	Soil	LVEGFSLEQIVMRMPVLAYFFVMGMILFGGLALASGQLESKPLAVSQRIGVPAPFKAPPNTNRSTVDAVDPSKK
Ga0310884_100653233	3300031944	Soil	LVEGLILEQIVMRMPVLVYFLGMGMILFGGLALASGQLESKPLAVSQRIGVPTPFKAPPDANSSPVDAVDSSKK
Ga0310906_103865581	3300032013	Soil	LVEGFSLEQIVMRMPVLVYFLGMGMILFGGLALASGQLESKPLAVSQRIGVPTPFKAPPDANSSPVDAVDSSKK
Ga0307470_106235292	3300032174	Hardwood Forest Soil	MPLLAYFLVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAFPDANGSPAGTMNSAVEQ
Ga0307470_106632171	3300032174	Hardwood Forest Soil	MPLLAYFLVMGIILFSGLVLVSSQLESKSLPVSQRIGVPPPFKAPPDANGSPAGTMNSAVEQ
Ga0310889_102485912	3300032179	Soil	LVEGLILEQIVMRMPVLAYFFVMGMILFGGLALASGQLESKPLAVSQRIGVPTPFKVPPDANSSPVDAVDSSKK
Ga0307472_1001275671	3300032205	Hardwood Forest Soil	MRMPLLAYFLAMGIILFTGLVLVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVFE
Ga0307472_1002796092	3300032205	Hardwood Forest Soil	RLEKSMRMPLLAYFLVMGIILFSGFVLVSSQLESKSLPVSQRIGVPPPFKAPPDANGSPAGTMNSAVEQ
Ga0373948_0000690_4229_4387	3300034817	Rhizosphere Soil	MGIILFTGLVFVSGQLESKSLPVSQRIGVPPPFKAQPDANGSPAGTVNSAVE
Ga0373948_0009354_258_443	3300034817	Rhizosphere Soil	MPLLAYFLAMGIILFTGLVLVSSQLESKSLPVSQRIGVPPPFKAQPDANGSPVGTVNSVV