Metagenome / Metatranscriptome Family F043382

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043382
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	61 residues
Representative Sequence	MTSEQMNYRAQQAEHLLERYSELERERESAGLYEEALEARRLRLEQEAAVSYWRDRATEAD
Number of Associated Samples	109
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.95 %
% of genes near scaffold ends (potentially truncated)	19.87 %
% of genes from short scaffolds (< 2000 bps)	87.82 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.897 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.744 % of family members)
Environment Ontology (ENVO)	Unclassified (20.513 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.513 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.80% β-sheet: 0.00% Coil/Unstructured: 38.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d1nfva_	1nfv	0.93945
a.25.1.1: Ferritin	d4cvra_	4cvr	0.91889
a.25.1.0: automated matches	d3b3ha_	3b3h	0.9144
c.49.2.0: automated matches	d5ik2g_	5ik2	0.91159
a.25.1.1: Ferritin	d1yuza1	1yuz	0.89579

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF00296	Bac_luciferase	41.67
PF08808	RES	7.69
PF00122	E1-E2_ATPase	5.77
PF12680	SnoaL_2	1.92
PF13384	HTH_23	0.64
PF01855	POR_N	0.64
PF02368	Big_2	0.64
PF02887	PK_C	0.64
PF00224	PK	0.64
PF07676	PD40	0.64
PF00353	HemolysinCabind	0.64
PF12590	Acyl-thio_N	0.64
PF04188	Mannosyl_trans2	0.64
PF00702	Hydrolase	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	41.67
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	7.69
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	5.77
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	5.77
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	5.77
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.28
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.64
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.64
COG5542	Mannosyltransferase related to Gpi18	Carbohydrate transport and metabolism [G]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.90 %
Unclassified	root	N/A	14.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.90 %
Unclassified	root	N/A	14.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.90 %
Unclassified	root	N/A	14.10 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.87 %
Unclassified	root	N/A	14.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.59 %
Unclassified	root	N/A	14.10 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	25.64 %
Unclassified	root	N/A	14.10 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.21 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.21 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	25.64 %
Unclassified	root	N/A	14.10 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.28 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.64 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.64 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.64 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.64 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	25.64 %
Unclassified	root	N/A	14.10 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.64 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.64 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.64 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	25.64 %
Unclassified	root	N/A	14.10 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.28 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.64 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	0.64 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.64 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.64 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	25.64 %
Unclassified	root	N/A	14.10 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.28 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.28 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.64 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.64 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.64 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.64 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_184117_length_1048_cov_6.956107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1080	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100494682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	969	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105533698	Not Available	513	Open in IMG/M
3300000956\|JGI10216J12902_101964232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4136	Open in IMG/M
3300000956\|JGI10216J12902_105793280	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300000956\|JGI10216J12902_107892966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	692	Open in IMG/M
3300000956\|JGI10216J12902_108499802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300000956\|JGI10216J12902_114496831	Not Available	845	Open in IMG/M
3300001686\|C688J18823_10263844	Not Available	1141	Open in IMG/M
3300001686\|C688J18823_10530653	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300002568\|C688J35102_118413887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	557	Open in IMG/M
3300002568\|C688J35102_118717800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	589	Open in IMG/M
3300002568\|C688J35102_119042841	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300002568\|C688J35102_119590731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	726	Open in IMG/M
3300002568\|C688J35102_119590732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	726	Open in IMG/M
3300002568\|C688J35102_119816262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	783	Open in IMG/M
3300002568\|C688J35102_120179170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300002568\|C688J35102_120525133	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300002568\|C688J35102_120540136	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300003659\|JGI25404J52841_10087612	Not Available	651	Open in IMG/M
3300003990\|Ga0055455_10286384	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300004114\|Ga0062593_101161772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	807	Open in IMG/M
3300004153\|Ga0063455_100663686	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300004156\|Ga0062589_100808077	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300004156\|Ga0062589_101716238	Not Available	627	Open in IMG/M
3300004156\|Ga0062589_102511278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	533	Open in IMG/M
3300004157\|Ga0062590_100870512	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300004643\|Ga0062591_100162124	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300004643\|Ga0062591_100172853	Not Available	1544	Open in IMG/M
3300004643\|Ga0062591_101369114	Not Available	700	Open in IMG/M
3300005093\|Ga0062594_100157687	Not Available	1501	Open in IMG/M
3300005093\|Ga0062594_100553576	Not Available	992	Open in IMG/M
3300005093\|Ga0062594_101424885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	705	Open in IMG/M
3300005332\|Ga0066388_100181562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2713	Open in IMG/M
3300005332\|Ga0066388_100678816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1640	Open in IMG/M
3300005332\|Ga0066388_101418466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1208	Open in IMG/M
3300005332\|Ga0066388_102687299	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005332\|Ga0066388_102729465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	901	Open in IMG/M
3300005332\|Ga0066388_103976109	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005332\|Ga0066388_106932849	Not Available	570	Open in IMG/M
3300005332\|Ga0066388_108508584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	511	Open in IMG/M
3300005338\|Ga0068868_100569634	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300005340\|Ga0070689_100302881	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300005445\|Ga0070708_101676537	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005468\|Ga0070707_101881727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	566	Open in IMG/M
3300005529\|Ga0070741_10023256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9415	Open in IMG/M
3300005562\|Ga0058697_10089491	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300005713\|Ga0066905_100055758	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300005764\|Ga0066903_100021453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6907	Open in IMG/M
3300005764\|Ga0066903_102927784	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005937\|Ga0081455_10026002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5392	Open in IMG/M
3300005937\|Ga0081455_10184127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1579	Open in IMG/M
3300005937\|Ga0081455_10302858	Not Available	1146	Open in IMG/M
3300005937\|Ga0081455_10904456	Not Available	549	Open in IMG/M
3300005983\|Ga0081540_1103274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1222	Open in IMG/M
3300006038\|Ga0075365_10486349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300006046\|Ga0066652_100811009	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300006046\|Ga0066652_100964516	Not Available	811	Open in IMG/M
3300006046\|Ga0066652_101287349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	690	Open in IMG/M
3300006046\|Ga0066652_101297101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300006051\|Ga0075364_10706858	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300006572\|Ga0074051_11658322	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300006573\|Ga0074055_11688807	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300006575\|Ga0074053_11147274	Not Available	907	Open in IMG/M
3300006575\|Ga0074053_11819787	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006581\|Ga0074048_10007526	Not Available	904	Open in IMG/M
3300006604\|Ga0074060_12019381	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006605\|Ga0074057_11642871	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300006606\|Ga0074062_12723331	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300006791\|Ga0066653_10439413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	666	Open in IMG/M
3300006791\|Ga0066653_10695348	Not Available	525	Open in IMG/M
3300006894\|Ga0079215_10368770	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300006904\|Ga0075424_101369150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	752	Open in IMG/M
3300009147\|Ga0114129_10098206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4053	Open in IMG/M
3300009156\|Ga0111538_11089497	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300009789\|Ga0126307_10000246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35390	Open in IMG/M
3300009789\|Ga0126307_10008059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7544	Open in IMG/M
3300009789\|Ga0126307_10028430	All Organisms → cellular organisms → Bacteria	4286	Open in IMG/M
3300009792\|Ga0126374_11817023	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300009840\|Ga0126313_10384417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1111	Open in IMG/M
3300010036\|Ga0126305_10197195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1275	Open in IMG/M
3300010037\|Ga0126304_10018633	All Organisms → cellular organisms → Bacteria	3924	Open in IMG/M
3300010037\|Ga0126304_11077747	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300010038\|Ga0126315_11011211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	557	Open in IMG/M
3300010039\|Ga0126309_10004466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5322	Open in IMG/M
3300010041\|Ga0126312_10109176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1896	Open in IMG/M
3300010042\|Ga0126314_11091084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	594	Open in IMG/M
3300010044\|Ga0126310_10810837	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300010045\|Ga0126311_10150752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1656	Open in IMG/M
3300010046\|Ga0126384_10261938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1403	Open in IMG/M
3300010047\|Ga0126382_11380281	Not Available	641	Open in IMG/M
3300010362\|Ga0126377_13260586	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300010399\|Ga0134127_11719212	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300011107\|Ga0151490_1103100	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300012204\|Ga0137374_10488056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	959	Open in IMG/M
3300012212\|Ga0150985_123236491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	518	Open in IMG/M
3300012355\|Ga0137369_10388629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1009	Open in IMG/M
3300012358\|Ga0137368_10278243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300012358\|Ga0137368_10845390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	563	Open in IMG/M
3300012469\|Ga0150984_101905668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	548	Open in IMG/M
3300012469\|Ga0150984_102234801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	686	Open in IMG/M
3300012903\|Ga0157289_10095710	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012905\|Ga0157296_10249947	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012913\|Ga0157298_10058794	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300012924\|Ga0137413_10078113	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300012924\|Ga0137413_10193976	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300012951\|Ga0164300_10103364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1255	Open in IMG/M
3300012961\|Ga0164302_10007945	All Organisms → cellular organisms → Bacteria	3996	Open in IMG/M
3300012977\|Ga0134087_10578868	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300012985\|Ga0164308_10710287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	868	Open in IMG/M
3300012988\|Ga0164306_10569767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300013772\|Ga0120158_10259628	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300014268\|Ga0075309_1227515	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300018032\|Ga0187788_10269042	Not Available	681	Open in IMG/M
3300018077\|Ga0184633_10388040	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300018432\|Ga0190275_11343176	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300019361\|Ga0173482_10208483	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300019362\|Ga0173479_10194765	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300019884\|Ga0193741_1114107	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300020140\|Ga0179590_1208831	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300022756\|Ga0222622_10266326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1167	Open in IMG/M
3300024288\|Ga0179589_10407878	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300024430\|Ga0196962_10055082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1205	Open in IMG/M
3300025929\|Ga0207664_10376568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1259	Open in IMG/M
3300027465\|Ga0207626_104955	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300027577\|Ga0209874_1127288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	589	Open in IMG/M
3300027647\|Ga0214468_1031949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1405	Open in IMG/M
3300027880\|Ga0209481_10614853	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300028380\|Ga0268265_12722283	Not Available	500	Open in IMG/M
3300028705\|Ga0307276_10201291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	524	Open in IMG/M
3300028710\|Ga0307322_10060602	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300028718\|Ga0307307_10238761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300028720\|Ga0307317_10181867	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300028755\|Ga0307316_10018957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2184	Open in IMG/M
3300028755\|Ga0307316_10123408	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300028768\|Ga0307280_10353475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	543	Open in IMG/M
3300028778\|Ga0307288_10276876	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300028787\|Ga0307323_10167706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	793	Open in IMG/M
3300028811\|Ga0307292_10032868	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300028812\|Ga0247825_10911213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	637	Open in IMG/M
3300028881\|Ga0307277_10460591	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300030006\|Ga0299907_10635151	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300030336\|Ga0247826_10951144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	680	Open in IMG/M
3300030511\|Ga0268241_10026539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300031228\|Ga0299914_11214116	Not Available	603	Open in IMG/M
3300031228\|Ga0299914_11235562	Not Available	596	Open in IMG/M
3300031229\|Ga0299913_10026781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	5396	Open in IMG/M
3300031229\|Ga0299913_10537876	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300031229\|Ga0299913_10820059	Not Available	903	Open in IMG/M
3300031740\|Ga0307468_100110444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1662	Open in IMG/M
3300031938\|Ga0308175_101429816	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300032159\|Ga0268251_10169286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	837	Open in IMG/M
3300032205\|Ga0307472_100847984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	840	Open in IMG/M
3300033433\|Ga0326726_10069067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3118	Open in IMG/M
3300033433\|Ga0326726_10249514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1652	Open in IMG/M
3300034090\|Ga0326723_0012649	All Organisms → cellular organisms → Bacteria	3348	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.82%
Host-Associated	Host-Associated	12.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.90%
Plants	Host-Associated → Plants	12.18%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Peat	Environmental → Terrestrial → Peat	1.92%
Sediment	Environmental → Aquatic → Sediment	1.28%
Roots	Host-Associated → Plants → Roots	1.28%
Phylloplane	Host-Associated → Plants → Phylloplane	1.28%
Marine	Environmental → Aquatic → Marine	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.10%
Loam	Environmental → Terrestrial → Soil → Loam	17.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.28%
Sand	Environmental → Terrestrial → Soil → Sand	1.28%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.28%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.28%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.13%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.64%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.64%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.97%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.28%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.28%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.28%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.28%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.64%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.64%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.64%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.64%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027465	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-A (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01120490	2140918013	Soil	MTSEQMNYRAQQAEHLLERFSELEREHESAGFYEEALEARRLRLEQEAAVSYWRGXXXXX
INPhiseqgaiiFebDRAFT_1004946822	3300000364	Soil	MTPEQMEYRAQQAEHLLERYSELERERETAGLYEEALEARRLRLEQEASVVYWRERLTSAA*
INPhiseqgaiiFebDRAFT_1055336982	3300000364	Soil	MTSEQMNYRAQQAAHLLERYSELERERESAGLYEEALEARRLRLEQQAAVSYWRDRATADN*
JGI10216J12902_1019642324	3300000956	Soil	MTSDQMSYRAQQAETLLKRYTELEREHESAGFYEEALEARRLRLEQEAAVTYWRDRATQDD*
JGI10216J12902_1057932804	3300000956	Soil	MTSEQMIYRAQQAEHLLERYSELERERESAGLYEEALEARRLRLEQAAAVSYWRDRATEV
JGI10216J12902_1078929662	3300000956	Soil	MTSEQMDYRAQQAAHLLKRYTELEHEHESAGFYEEALEARRLRLEQEAAVSYWRDRASEDASA*
JGI10216J12902_1084998022	3300000956	Soil	MTSEQMNYRVQQAEHLLERFTELERERESAGLYEEALEARRLRLEQEAAVSYWRDRAAAV
JGI10216J12902_1144968312	3300000956	Soil	MTPEQMIHRAERSQRLLEHYRQLERERESAGHYEDALEARRLRLEQEASVVYWRSRAEEVA*
C688J18823_102638441	3300001686	Soil	MTSEQMNYRAQQAEHLLERFSELEREHESAGLYEEALEARRLRLEQEAAVSYWRDRATDTA*
C688J18823_105306531	3300001686	Soil	MTPEQMEYRVRQAEQLLERYTDLEREREKAGLYEEALEARRLRLEQEASVIYWRSRATEAA*
C688J35102_1184138871	3300002568	Soil	MTPEQMEYRVRQAEQLLERYTELERERETAGLYEEALEARRLRLEQEASVDYWRSRAIEAA*
C688J35102_1187178001	3300002568	Soil	YRAQQAEHLLERFSELEREHESAGLYEEALEARRLRLEQEAAVSYWRDRATDIA*
C688J35102_1190428411	3300002568	Soil	MTPEQMEHRAQQAERLLERYRDLERESESAGLYEEALEARRLRLEQEASVNYWRERLSEAAA*
C688J35102_1195907312	3300002568	Soil	MTSEQMEYRAHQAEQLLERYIELERDRETAGLYEEALEARRLRLEQEASVVYWRSRAIEAA*
C688J35102_1195907322	3300002568	Soil	MTSEQLEYRAHQAEQLLERYIELERDRETAGLYEEALEARRLRLEQEASVVYWRSRAIEAA*
C688J35102_1198162622	3300002568	Soil	MTSEQMIYRAQQAEHLLERFTELERERESAGLYEEALEAHRLRLEQQAAVSYWRERASESVLAP*
C688J35102_1201791703	3300002568	Soil	MTPEQMEYRAQQAEHLLERYSVLERERETAGLYEEALEARRLRLEQEASVTYWRERLTSAA*
C688J35102_1205251332	3300002568	Soil	MDMTSEQMIYRAQQAEHLLERYSELEREHEAAGFYEEALEAHRLLLEQEAAVSYWRDRASEPAQV*
C688J35102_1205401362	3300002568	Soil	MTPEQMEYRAHQAEQLLERYAELEREREKAGLYEEALEARRLRLEQEASVVYWRSRATDAA*
JGI25404J52841_100876121	3300003659	Tabebuia Heterophylla Rhizosphere	MTSEQMNYRAEQAEHLLERYSELERERESAGLYEEALEARRLRLEQAAAVSYWRDRATESA*
Ga0055455_102863841	3300003990	Natural And Restored Wetlands	MTPEQMEYRAQQAEHLLERYSELERERETAGLYEEALEARRLRLEQEASVIYWRERLSEAA*
Ga0062593_1011617722	3300004114	Soil	MTSEQMNYRAQQAAHLLERYSELERERESAGLYEEALEARRLRLEQEAAVSYWRDRATEDN*
Ga0063455_1006636862	3300004153	Soil	MTPEQMEYRVRQAEQLLERYTDLEREREKEGLYEEALEARRLRLEQEASVIYWRSRATEAA*
Ga0062589_1008080772	3300004156	Soil	MTPEQMIYRAQQAEGLLNRYLKLERQHESEGLYEEALEARRYRLEQEAAISYWRSRAQAAH*
Ga0062589_1017162381	3300004156	Soil	MTAEQMIYRAEQAQRLLERYRELERERESAGFYEDALEARRMRLEQEASVTYWRGRASEAA*
Ga0062589_1025112781	3300004156	Soil	MTSEQMNYRAQQAAHLLERYSELERERESAGLYEEALEARRLRLEQEAAVSYWRDRATESN*
Ga0062590_1008705121	3300004157	Soil	MTPEQMNYRAQQAERLLERYRELEREREAGGLYEDALEARRLCLEQEASVIYWRARASEAA*
Ga0062591_1001621242	3300004643	Soil	MNYRAQQAERLLERYRELEREREAGGLYEDALEARRLCLEQEASVIYWRARASEAA*
Ga0062591_1001728531	3300004643	Soil	EQAQRLLERYRELERERESAGFYEDALEARRMRLEQEASVTYWRGRASEAA*
Ga0062591_1013691141	3300004643	Soil	MTAEQMIYRAEQAERLLERYRELERERESAGFYEDALEARRMRLEQEASVTYWRGRASEAA*
Ga0062594_1001576871	3300005093	Soil	MTAEQMIYRAEQAQRLLERYRELEQERESAGFYEDALEARRLRLEQEASVTYWRGRASEAA*
Ga0062594_1005535761	3300005093	Soil	MTTDQMIFRAEQAEHLKDRFAELERDREGSGLYEEALEARRMRLEQEAAVLYWRSRANGDAP*
Ga0062594_1014248852	3300005093	Soil	MTSEQMIYRAQQAEHLLERYRDLEREREDAGLYEEALEARRLRLEQEASIAYWRSRADEAA*
Ga0066388_1001815622	3300005332	Tropical Forest Soil	MTTEQMIYRAQQAEHLLDRYRDLERERENAGLYEEALEARRFRLEQEAAIIYWRSRVDEVA*
Ga0066388_1006788164	3300005332	Tropical Forest Soil	MTAEQMNYRAQQAENLLERYSELEREHESAGFYEEALEARRLRLEQEAAVSYWRDRAAETD*
Ga0066388_1014184662	3300005332	Tropical Forest Soil	MTTEQMLYRANQAEQLEQRFAELQREREGSGMYEDALEARRLRLEQEAAAIYWRSRANGEAP*
Ga0066388_1026872992	3300005332	Tropical Forest Soil	MTTEQMIYRAQQAEHLLDRYAELERDREAAGLYEEALEARRLRLEQQAAISYWR
Ga0066388_1027294653	3300005332	Tropical Forest Soil	MTPEQMIYRARQAENLLERYTELERERESAGLYEEALEARRLRLEQEASIIYWRSRAAEA
Ga0066388_1039761092	3300005332	Tropical Forest Soil	MTVEQMIYRAQQAEHLLERYTELERERESAGLYEEALEARRLRLEQQAAISYWRERATEAVQTA*
Ga0066388_1069328492	3300005332	Tropical Forest Soil	MTTEQMIYRAQQAEHLLDRYAELELERESAGLYEEALEARRLRLEQQAAISYWRERAVES
Ga0066388_1085085841	3300005332	Tropical Forest Soil	NYRAQQAEHLLERYSELERERESAGLYEEALEARRLRLEQEAAVSYWRDRATEAD*
Ga0068868_1005696342	3300005338	Miscanthus Rhizosphere	MTAEQMIYRAEQAQRLLERYRELERERESAGFYEDALEARRLRLEQEASVTYWRGRASEAA*
Ga0070689_1003028811	3300005340	Switchgrass Rhizosphere	MTPEQMIYRAQQAEGLLDRYLELERQHEAEGLYEEALEARRYRLEQEAAISYWRSRAQAAH*
Ga0070708_1016765372	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEQMIYRANQAEKLEQRFAELQREREGHGMYEEALEARRLRLEQEAAAIYWRSRANGEAP*
Ga0070707_1018817272	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EYRAQQAEHLLERYSELERERETAGLYEEALEARRLRLEQEASVTYWRERLSDAA*
Ga0070741_100232569	3300005529	Surface Soil	MTPEQMIYRAQQAEHLRERYTELERERERAGLYEEALEARRLRLEQEASVIYWRDRASEVQPA*
Ga0058697_100894912	3300005562	Agave	MTSDQMNYRAQQAEHLLERYTELEREHESAGFYEEALETRRLRLEQEAAVSYWRDRAADSD*
Ga0066905_1000557584	3300005713	Tropical Forest Soil	MIMTAEQMIYRAQQAEHLLERYTELERERESAGLYEEALEARRLRLEQQAAVSYWRERATEAVQTV*
Ga0066903_1000214533	3300005764	Tropical Forest Soil	MTPEQMRYRAEQAEHLLERYRELEHERETAGLYEEALEARRFRLEQEASVFYWRSRASEADA*
Ga0066903_1029277842	3300005764	Tropical Forest Soil	MTSEQMIYRAQQAQHLLERYTELEQERESAGLYEEALEARRLRLEQEASIIYW
Ga0081455_100260025	3300005937	Tabebuia Heterophylla Rhizosphere	MTSDQVNYRAQQAEHLLDRYTELEREHESAGLYEEALEARRMRLEQEAAVSYWRERASDSPA*
Ga0081455_101841272	3300005937	Tabebuia Heterophylla Rhizosphere	MTSEQMNYRVQQAEHLLERYTELERERESAGLYEEALEARRLRLEQEAAVSYWRDRAADTV*
Ga0081455_103028581	3300005937	Tabebuia Heterophylla Rhizosphere	MTSDQMNYRAQQAEHLLERYSELEREHQSAGLYEEALEARRLRLEQEAAVSYWRERASEDA*
Ga0081455_109044562	3300005937	Tabebuia Heterophylla Rhizosphere	MTSDQMSYRAQQAETLLKRYTELEREHESAGFYEEALEARRLRLEQEAAVSYWRDRATEDS*
Ga0081540_11032743	3300005983	Tabebuia Heterophylla Rhizosphere	MTSEQMNYRAQQAEHLLERYSELERERESAGLYEEALEARRLRLEQEAAVSYWRDRATEAD*
Ga0075365_104863492	3300006038	Populus Endosphere	MTEQQMAFRAEQAEKLKERYIELERERERAGLYEEALEARRMRHEQAAAATYWRSRVEGATP*
Ga0066652_1008110092	3300006046	Soil	MTPEQMIYRAQQAENLLERYSELERARERDGLYEEALEARRLRLEQEASITYWRDRAAQVA*
Ga0066652_1009645162	3300006046	Soil	MTSEQMDYRAQQAAHLLKRYTELEREHESAGFYEEALEARRLRLEQEAAVSYWRDRASED
Ga0066652_1012873491	3300006046	Soil	MTSEQMIYRAQQAEHLLERYSELEREREAAGLYEEALEARRFRLEQAAAVSYWRDRATQPV*
Ga0066652_1012971012	3300006046	Soil	MTSEQMIYRAQQAEHLLDRYRELEREHEDAGFYEEALEARRFRLEQEAAVNYWLSRADDAV*
Ga0075364_107068582	3300006051	Populus Endosphere	MIDRIERAEKANRRLSEVEREHEQAGFYEEALEARRLRLDQEASVLYWRARVGGGTP*
Ga0074051_116583222	3300006572	Soil	MTPEQMNHRAQQAERLLERYRELEREREAGGLYEDALEARRLCLEQEASVIYWRTRASEAA*
Ga0074055_116888072	3300006573	Soil	MTHAQMEYRAQQAESLLERYRELERERESAGLYEEALEARRLRLEQEASVTYWRERLSDAA*
Ga0074053_111472742	3300006575	Soil	QAEHLLEQYRQLERERETAGLYEEALEARRLRLEQEASVVYWRERLSAAIA*
Ga0074053_118197872	3300006575	Soil	MTPEQIEYRAQQAQHLLERYREIEHERERAGLYEEALEARRLRLEQEASVDYWRERLTDAA*
Ga0074048_100075262	3300006581	Soil	EQMNHRAQQAERLLERYRELEREREAGGLYEDALEARRLCLEQEASVIYWRTRASEAA*
Ga0074060_120193812	3300006604	Soil	MTPEQMNHRAQQAERLLERYRQLEREREAGGLYEDALEARRLCLEQEASVIYWRTRASEAA*
Ga0074057_116428713	3300006605	Soil	MTPEQMEYRTQQAEHLLEQYRQLERERETAGLYEEALEARRLRLEQEASVVYWRERLSAAIA*
Ga0074062_127233312	3300006606	Soil	MTPEQMNYRAQQAERLLERYRELEREREAGGLYEDALEARRLCLEQEASVIYWRTRASEAA*
Ga0066653_104394131	3300006791	Soil	MTPEQMIYRARQAENLLERYCELERERESAGLYEEALEARRMRLEKEASLTYWRSRAEETA*
Ga0066653_106953481	3300006791	Soil	VADKGCMTSEQMDYRAQQAAHLLKRYTELEREHESAGFYEEALEARRLRLEQEAAVSYWRDRASEDTSI*
Ga0079215_103687702	3300006894	Agricultural Soil	MTTEQMIFRAEQAEHLKDRFAELEREREHSGLYEEALEARRMRLEQEAAVLYWRSRANGDTP*
Ga0075424_1013691502	3300006904	Populus Rhizosphere	MTSEQMDYRAQQAAHLLKRYTELEREHESAGFYEEALEARRLRLEQEAAVSYWRDRASEDTSA*
Ga0114129_100982064	3300009147	Populus Rhizosphere	MTTEQMIFRAEQAEHLKDRFAELEREREGSGLYEEALEARRMRLEQEAAVLYWRSRANGDAP*
Ga0111538_110894971	3300009156	Populus Rhizosphere	MTTEQMIFRAEQAEHLKDRFAELEREREGSGLYEEALEARRMRLEQEAAVLYWRSRANGDDP*
Ga0126307_1000024622	3300009789	Serpentine Soil	VREWLIFRVKKLPLAADKNPMTSEQMDYRAQQAEHLLERYTELEREHESAGFYEEALEAHRLRLEQQAAVSYWRDRAADSN*
Ga0126307_100080596	3300009789	Serpentine Soil	MTLEQMIYRAQQAEHLLERYAELERDRESAGLYEEALEARRLRLEQEASITYWRSRADEAA*
Ga0126307_100284302	3300009789	Serpentine Soil	MTSEQMNYRARQAEHLLERYTQLEHELESAGHYEEALEARRLRLGQEASVSYWRDRASEPAQI*
Ga0126374_118170231	3300009792	Tropical Forest Soil	MGMTPEQMIYRARQAENLLQRYIELEHERESAGLYEEALEARRLRLEQEASIIYWRSRVAEA*
Ga0126313_103844172	3300009840	Serpentine Soil	MSPLREAEEKCMTPEQMIYRAQQAEHLLERYTELERERQTAGLYEEALEARRLRLEQEASVVYWRERASAAA*
Ga0126305_101971951	3300010036	Serpentine Soil	KLPLAADKNPMTSEQMDYRAQQAEHLLERYTELEREHESAGFYEEALEAHRLRLEQQAAVSYWRDRAADSN*
Ga0126304_100186334	3300010037	Serpentine Soil	MTSEQMNYRARQAEHLLERYTQLEHELESAGHYEEALEARRLRLEQEASVSYWRDRASEPAQI*
Ga0126304_110777471	3300010037	Serpentine Soil	MTPEQMEYRAQQAEQLLERFRRLETEREKAGLYEEALEARRLRLEQEASVDYWRSRLSDAA*
Ga0126315_110112111	3300010038	Serpentine Soil	IYRAQQAEHLLERYTELERERETAGLYEEALEARRPRLEQEASVVYWRERASAAA*
Ga0126309_100044665	3300010039	Serpentine Soil	MTPEQMIYRAQQAESLLERYRDLERDREGAGLYEEALEARRLRLEQEASIIYWRSRAEETRVA*
Ga0126312_101091762	3300010041	Serpentine Soil	MTPEQMEYRAQQAEQLLERYSELEQARETAGLYEEALEARRLRLEQEASVLYWRERLTEPA*
Ga0126314_110910842	3300010042	Serpentine Soil	MTPEQMAYRAQQAEQLLDRFRRLETEREQAGLYEEAREARRLRLEQEASVEYWRSRLSDAA*
Ga0126310_108108372	3300010044	Serpentine Soil	MTPEQMAYRAQQAEQLLDRFRRLETEREQAGLYEEALEARRLRLEQEASVEYWRSRLSDAA*
Ga0126311_101507522	3300010045	Serpentine Soil	VKIRRGTTEKKVMTPEQMIYRAQQAEHLLERYVELERDRESAGLYEEALEARRLRLEQEASITYWRSRAADAA*
Ga0126384_102619382	3300010046	Tropical Forest Soil	MTAEQMNYRAQQAKTLLKRYSELEREHESAGFYEEALEARRLRLEQEAAVSYWRDRAAETD*
Ga0126382_113802812	3300010047	Tropical Forest Soil	MTSDQMNYRAQQAEHLLERYSELEREHESAGFYEEALEARRLRLEQEAAVSYWRDRASESD*
Ga0126377_132605862	3300010362	Tropical Forest Soil	MIMTAEQMIYRAQQAEHLLERYTELERERESAGLYEEALEARRLRLEQQAAISYWRERATEAVQTA*
Ga0134127_117192121	3300010399	Terrestrial Soil	MTAEQMIYRAEQAERLLERYRELERESESAGFYEDALEARRMRLEQEASVTYWRGRASEAA*
Ga0151490_11031002	3300011107	Soil	MTPEQMNHQAQQAERLLERYRELEREREAGGLYEDALEARRLCLEQEASVIYWRTRASEAA*
Ga0137374_104880563	3300012204	Vadose Zone Soil	VKGRRDRADKIHMTPEQMIYRAQQAEHLLERYTELEREQETAGLYEEALEARRLRLEQEASVAYWRSRAADAA*
Ga0150985_1232364911	3300012212	Avena Fatua Rhizosphere	QGAEKRGMTPEQMEYRAQQAEHLLERYSVLERERETAGLYEEALEARRLRLEQEASVTYWRERLTSAA*
Ga0137369_103886292	3300012355	Vadose Zone Soil	GVKCRGREAEKRGMTPEQMEYRAQQAENLLERYSQLERERETAGLYEEALEARRLRLEQEASVVYWRERLSDAA*
Ga0137368_102782432	3300012358	Vadose Zone Soil	MTPEQMEYRAQQAKNLLERYSQLERERETAGLYEEALEARRLRLEQEASVVYWRERLSDAA*
Ga0137368_108453901	3300012358	Vadose Zone Soil	MTPEQMIYRAQQAEHLLERYTELEREQETAGLYEEALEARRLRLEQEASVAYWRSRAADAA*
Ga0150984_1019056682	3300012469	Avena Fatua Rhizosphere	GAEKRGMTPEQMEYRAQQAEHLLERYSVLERERETAGLYEEALEARRLRLEQEASVTYWRERLTSAA*
Ga0150984_1022348013	3300012469	Avena Fatua Rhizosphere	QMIYRVQQAEHLLERYAELEHEHESAGLYEEALEARRLRLEQEASVSYWRDRASESVSA*
Ga0157289_100957101	3300012903	Soil	QAEGLLNRYLKLERQHESEGLYEEALEARRYRLEQEAAISYWRSRAQAAH*
Ga0157296_102499471	3300012905	Soil	MTPEQMNYRAQQAERLLERYRELECEREAGGLYEDALEARRLCLEQEASVIYWRARASEAA*
Ga0157298_100587942	3300012913	Soil	MTPEQMIYRAQQAEGLLDRYRELERQHEAEGLYEEALEARRYRLEQEAAISYWRSRAQAAH*
Ga0137413_100781133	3300012924	Vadose Zone Soil	MTPEQIEYRAQQAQHLLERYSDLERERETAGLYEEALEARRLRLEQEASVVYWRERLSSVA*
Ga0137413_101939762	3300012924	Vadose Zone Soil	MTPEQMEYRAQQAEQLLERYSELEREHETAGLYEEALEARRLRLEQEASVLYWRERVTETA*
Ga0164300_101033644	3300012951	Soil	AQQAEHLLERFTELERERESAGLYEEALEAHRLRLEQQAAVSYWRERASESVLAP*
Ga0164302_100079452	3300012961	Soil	MTSEQMIYRAQQAEHLLERFTELERERESAGLYEEALEAHRLRLEQQAAVNYWRERASESVLAP*
Ga0134087_105788682	3300012977	Grasslands Soil	MTPEQMEYRAHQAEQLLERYTELEREREKAGLYEEALEARRLRLEQEASVVYWRSRATDAA*
Ga0164308_107102872	3300012985	Soil	MTSEQMIYRAQQAEHLLERFTELERERESAGLYEEALEAHRLRLEQQAAVSYWRERALESVLTP*
Ga0164306_105697672	3300012988	Soil	MTPEQMIYRAQQAEGLLDRYLELERQHEAEGLYEEALEARRYRLEQEAAISYWRSRAQAAL*
Ga0120158_102596281	3300013772	Permafrost	MTSEQMIYRAQQAEHLLERYTELEQERETEGLYEEALEARRLRLEQEASVIYWRSRASEAA*
Ga0075309_12275151	3300014268	Natural And Restored Wetlands	RAEQAEHLKDRFAELEREREHSGLYEEALDARRMRLEQEAAVLYWRSRADGETP*
Ga0187788_102690422	3300018032	Tropical Peatland	VVMTVEQMIHRAQQAERLLERYRELERDRESAGLYEDALEARRLRLEQQASVIYWRGRAAEAA
Ga0184633_103880402	3300018077	Groundwater Sediment	YRAEQAEHLQERFTELERERQGSGLYEEALEARRLRLEQEAAILYWRSRANGDAS
Ga0190275_113431762	3300018432	Soil	MTTEQMIHRAEHAEHLKQRYIELEREREDAGLYEQALEARRMRHEQEAAVLYWRSRADEAAAAV
Ga0173482_102084832	3300019361	Soil	MTPEQMNHRAQQAERLLERYRELEREREAGGLYEDALEARRLCLEQEASVIYWRTRASEA
Ga0173479_101947652	3300019362	Soil	MTPEQMNHRAQQAERLLERYRELEREREAGGLYEDALEARRLCLEQEASVIYWRARASEA
Ga0193741_11141072	3300019884	Soil	MIHRAKRAEQLRKRLTEVEQEREATGLYEEALEARRLRLEHEAAAFYWRSRANGGTP
Ga0179590_12088312	3300020140	Vadose Zone Soil	MIYRAQQAERLLDRYRELEQKSEADGLYEEALEARRVRLEQEAAVSYWRSRAASAV
Ga0222622_102663262	3300022756	Groundwater Sediment	MIYRVQQAEHLLERFAELEREREDAGLYEEALEARRLRLEQEAAVSYWRERASETVSA
Ga0179589_104078782	3300024288	Vadose Zone Soil	MTTEQMIYRAQQAERLLDRYRELEQKSEADGLYEEALEARRVRLEQEAAVSYWRSRAASA
Ga0196962_100550822	3300024430	Soil	MTVEQMAHRARQAEELRERYSKLERERESAGLYEEALEARRMRHEQAAAALYWRSRAEDDAIGSAQRV
Ga0207664_103765681	3300025929	Agricultural Soil	QAEHLRERYTELEQEREQAGLYEEALEARRLRLEQEASVIYWRDRASEIQPA
Ga0207626_1049551	3300027465	Soil	MTAEQMIYRAEQAQRLLERYRELERERESAGFYEDALEARRLRLEQEASVTYWRGRAS
Ga0209874_11272882	3300027577	Groundwater Sand	MTTEQMIHRAKRAEQLHKRLTEVEREREATGLYEEALEARRLRLEHEAAALYWRSRANGGAP
Ga0214468_10319492	3300027647	Soil	MTTEQMIFRAEQAEHLKDRFAELELEREHSGLYEEALEARRMRLEQEAAVLYWRSRANGETP
Ga0209481_106148531	3300027880	Populus Rhizosphere	MTTEQMIFRAEQAEHLKDRFAELEREREGSGLYEEALEARRMRLEQEAAVLYWRSRANG
Ga0268265_127222832	3300028380	Switchgrass Rhizosphere	HRGPMRKQMTTDQMIFRAEQAEHLKDRFAELERDREGSGLYEEALEARRMRLEQEAAVLYWRSRANGDAP
Ga0307276_102012912	3300028705	Soil	MTTDQMNYRAQQAQRLLERYIELEREQEAAGFYEEALEARRLRLEQEAAMSYWRDRASEP
Ga0307322_100606022	3300028710	Soil	MTSEQMIYRAQQAEHLLERFTELERESESAGLYEEALEAHRLRLEQEAAVSYWRERATESALAR
Ga0307307_102387612	3300028718	Soil	MIRGAAAEEKGMTPEQMEYRVRQAEQLLERYTDLERERENAGLYEEALEARRLRLEQEASVVYWRSRATDAA
Ga0307317_101818672	3300028720	Soil	MTSEQMIYRAQQAEHLLERFTELERESESAGLYEEALEAHRLRLEQEAAVSYWRERASESALAP
Ga0307316_100189573	3300028755	Soil	MTSEQMIYRAQQAEHLLERFTELERESESAGLYEEALEAHRLRLEQEAAVSYWRERATESALAP
Ga0307316_101234082	3300028755	Soil	MTPEQMEYRVRQAEQLLERYTELERERETAGLYEEALEARRLRLEQEASVVYWRSRATDA
Ga0307280_103534751	3300028768	Soil	PEQMEYRAHQAEQLLERYAELEREREKAGLYEEALEARRLRLEQEASVVYWRSRATDAA
Ga0307288_102768762	3300028778	Soil	MTPEQMEYRVRQAEQLLERYTDLERERENAGLYEEALEARRLRLEQEASVVYWRSRATDA
Ga0307323_101677061	3300028787	Soil	EQMEYRVRQAEQLLERYTELERERETAGLYEEALEARRLRLEQEASVVYWRSRAIEAA
Ga0307292_100328684	3300028811	Soil	MTPEQMEYRVRQAEQLLERYTELERERETAGLYEEALEARRLRLEQEASVVYWRSRAIEA
Ga0247825_109112131	3300028812	Soil	MTSEQMIYRAQQAEHLLERFTELEQEHESAGFYEEALEAGRLRLEQEAAVSYWRERAAQPAHT
Ga0307277_104605911	3300028881	Soil	MTHDQMNYRAQQAQHLLERYSELEREHEAAGFYEEALEARRLRLEQEAAV
Ga0299907_106351511	3300030006	Soil	MTTEQMIFRAEQAEHLKDRFAELEREREHSGLYEEALDARRMRLEQEAAVIYWRSRANGETP
Ga0247826_109511441	3300030336	Soil	QMIYRAQQAEHLLERFTELEQEHESAGFYEEALEAGRLRLEQEAAVSYWRERAAQPAHT
Ga0268241_100265392	3300030511	Soil	MTVEQMIYRAQQAEHLLDRYTKLERERESAGLYEEALEARRLRLEQEASITYWRSRAAEA
Ga0299914_112141162	3300031228	Soil	MTEQQMTFRAEQAEHLKDRYLELERERERSGLYEEALEARRMRHEQEAAAIYWRERA
Ga0299914_112355622	3300031228	Soil	MLHRAMQAERLDERLREVERESENVGLYEEALEARRLRLEQQSAAMYWRDRAAGGAP
Ga0299913_100267818	3300031229	Soil	MTTEQMIFRAEQAEHLKDRFAELEREREHSGLYEEALEARRMRLEQEAAVLYWRSRANGETP
Ga0299913_105378762	3300031229	Soil	MTHEQMSDRAAKAERLRQRYQELERERENAGLYEEALEARRMRHEQAAAALYWRARAEEGATADSL
Ga0299913_108200592	3300031229	Soil	MTEQQMMFRADQADHLKDRYLELERERERSGLYEEALEARRMRHEQEAAAIYWRSRAEDAAAAI
Ga0307468_1001104442	3300031740	Hardwood Forest Soil	MIYRAQQAENLLERFTELEQEHESAGFYEEALEARRLRLEQEAAISYWRERADQPAQT
Ga0308175_1014298161	3300031938	Soil	MTPEQMEHRAQQAERLLERYRDLERESESAGLYEEALEARRLRLEQEASVSYWRERLSEPAA
Ga0268251_101692862	3300032159	Agave	MTSDQMNYRAQQAEHLLERYTELEREHESAGFYEEALETRRLRLEQEAAVSYWRDRAADS
Ga0307472_1008479842	3300032205	Hardwood Forest Soil	MTSEQMIYRAQQAEHLLERFTELEQEHESAGFYEEALEAGRLRLEQEAAVSYWRERAAQPAHS
Ga0326726_100690673	3300033433	Peat Soil	MAEEKGMTPEQMEYRAQQAEHLLERYRDLERERESAGLYEEALEARRLRLEQEASVSYWRERISQAA
Ga0326726_102495142	3300033433	Peat Soil	MTPEQIEYRAQQAEHLLARYRELEREREDAGLYEEALEARHLRLEQEASVTYWRARASEA
Ga0326723_0012649_1885_2070	3300034090	Peat Soil	MTPEQIEYRAQQAEHLLARYRELEREREDAGLYEEALEARRLRLEQEASVTYWRARASEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043382

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences