Metagenome Family F042594

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042594
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	47 residues
Representative Sequence	GFYAVQPFPGKLIVYGSISGLIEMIIVGAIVGAIYKPASARTP
Number of Associated Samples	133
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.53 %
% of genes near scaffold ends (potentially truncated)	87.34 %
% of genes from short scaffolds (< 2000 bps)	89.87 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.367 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.785 % of family members)
Environment Ontology (ENVO)	Unclassified (34.810 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.228 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.03% β-sheet: 0.00% Coil/Unstructured: 61.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF04371	PAD_porph	74.68
PF00403	HMA	4.43
PF00162	PGK	1.90
PF13472	Lipase_GDSL_2	1.90
PF13676	TIR_2	1.27
PF00044	Gp_dh_N	1.27
PF13545	HTH_Crp_2	0.63
PF00027	cNMP_binding	0.63
PF06271	RDD	0.63
PF04542	Sigma70_r2	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2957	Agmatine/peptidylarginine deiminase	Amino acid transport and metabolism [E]	74.68
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	4.43
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	4.43
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	1.90
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	1.27
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.63
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.63
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.63
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.63
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.37 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.37 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.37 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	50.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	50.00 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	10.76 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.27 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.76 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.90 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.63 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.76 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.90 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.63 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.76 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.90 %
unclassified Cytophagales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales	0.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.63 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.76 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.90 %
Cytophagales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	0.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.63 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.63 %
Unclassified	root	N/A	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02JYRI0	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	518	Open in IMG/M
3300000955\|JGI1027J12803_101176379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	545	Open in IMG/M
3300002899\|JGIcombinedJ43975_10098264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300004114\|Ga0062593_102164233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300004114\|Ga0062593_102887548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	549	Open in IMG/M
3300005093\|Ga0062594_101048400	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300005167\|Ga0066672_10091013	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300005171\|Ga0066677_10737650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	549	Open in IMG/M
3300005172\|Ga0066683_10094486	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1809	Open in IMG/M
3300005172\|Ga0066683_10656952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	628	Open in IMG/M
3300005176\|Ga0066679_10354717	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300005178\|Ga0066688_10133023	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300005178\|Ga0066688_10203396	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300005179\|Ga0066684_10218121	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300005181\|Ga0066678_11103024	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005184\|Ga0066671_10842633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	584	Open in IMG/M
3300005332\|Ga0066388_101322527	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300005340\|Ga0070689_100929326	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005450\|Ga0066682_10333841	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005450\|Ga0066682_10423495	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005471\|Ga0070698_101777765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	569	Open in IMG/M
3300005552\|Ga0066701_10112096	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300005554\|Ga0066661_10112418	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300005558\|Ga0066698_10477193	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005564\|Ga0070664_101237575	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005586\|Ga0066691_10026240	All Organisms → cellular organisms → Bacteria	2963	Open in IMG/M
3300005598\|Ga0066706_10281601	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300005764\|Ga0066903_101715410	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300005764\|Ga0066903_104010044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300005764\|Ga0066903_107505688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	563	Open in IMG/M
3300006031\|Ga0066651_10483042	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300006046\|Ga0066652_100408967	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300006046\|Ga0066652_101222660	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300006163\|Ga0070715_10545596	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006800\|Ga0066660_10019705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3918	Open in IMG/M
3300006800\|Ga0066660_11126175	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006954\|Ga0079219_10513014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	844	Open in IMG/M
3300007255\|Ga0099791_10222962	Not Available	891	Open in IMG/M
3300007258\|Ga0099793_10463340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	627	Open in IMG/M
3300009012\|Ga0066710_104860637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	503	Open in IMG/M
3300009038\|Ga0099829_11130603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300009090\|Ga0099827_11371692	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	615	Open in IMG/M
3300009098\|Ga0105245_10372567	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300009137\|Ga0066709_101651809	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300009162\|Ga0075423_10899016	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300010043\|Ga0126380_10610094	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300010046\|Ga0126384_12341193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300010303\|Ga0134082_10005993	All Organisms → cellular organisms → Bacteria	4345	Open in IMG/M
3300010321\|Ga0134067_10003987	All Organisms → cellular organisms → Bacteria	3819	Open in IMG/M
3300010323\|Ga0134086_10445366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	528	Open in IMG/M
3300010325\|Ga0134064_10475368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	514	Open in IMG/M
3300010326\|Ga0134065_10171984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	769	Open in IMG/M
3300010329\|Ga0134111_10117281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1033	Open in IMG/M
3300010337\|Ga0134062_10362902	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010359\|Ga0126376_10455201	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300010359\|Ga0126376_11422937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300010360\|Ga0126372_11048785	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300010361\|Ga0126378_11030029	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300010366\|Ga0126379_11717323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	732	Open in IMG/M
3300012199\|Ga0137383_11051727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	591	Open in IMG/M
3300012200\|Ga0137382_10655685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	751	Open in IMG/M
3300012200\|Ga0137382_11173643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	546	Open in IMG/M
3300012201\|Ga0137365_10839874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	671	Open in IMG/M
3300012202\|Ga0137363_10951667	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300012202\|Ga0137363_11242285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300012205\|Ga0137362_10389865	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300012207\|Ga0137381_11732077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300012207\|Ga0137381_11771579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	507	Open in IMG/M
3300012208\|Ga0137376_10132144	All Organisms → cellular organisms → Bacteria	2137	Open in IMG/M
3300012208\|Ga0137376_10162828	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300012208\|Ga0137376_10442566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1128	Open in IMG/M
3300012208\|Ga0137376_11763613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	510	Open in IMG/M
3300012210\|Ga0137378_11385708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	617	Open in IMG/M
3300012211\|Ga0137377_11215020	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012349\|Ga0137387_10627869	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300012354\|Ga0137366_10752132	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012360\|Ga0137375_10242591	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300012361\|Ga0137360_10114975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2083	Open in IMG/M
3300012362\|Ga0137361_11877229	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012917\|Ga0137395_10380528	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300012925\|Ga0137419_11150243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	648	Open in IMG/M
3300012927\|Ga0137416_11653168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300012927\|Ga0137416_12023828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	528	Open in IMG/M
3300012927\|Ga0137416_12223680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	504	Open in IMG/M
3300012929\|Ga0137404_10056236	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300012930\|Ga0137407_10150707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2054	Open in IMG/M
3300012930\|Ga0137407_10247542	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300012948\|Ga0126375_10731287	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300012948\|Ga0126375_11568176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	566	Open in IMG/M
3300012971\|Ga0126369_12728326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	578	Open in IMG/M
3300012972\|Ga0134077_10011207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2929	Open in IMG/M
3300012975\|Ga0134110_10319399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300013296\|Ga0157374_10704061	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300014150\|Ga0134081_10039503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1388	Open in IMG/M
3300014150\|Ga0134081_10043928	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300015241\|Ga0137418_10090790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2760	Open in IMG/M
3300015264\|Ga0137403_10150195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2296	Open in IMG/M
3300015356\|Ga0134073_10363340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300015358\|Ga0134089_10412636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	579	Open in IMG/M
3300016294\|Ga0182041_10923793	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300016357\|Ga0182032_11021015	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300016371\|Ga0182034_10973298	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300016404\|Ga0182037_12031771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300018431\|Ga0066655_10077587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1799	Open in IMG/M
3300018433\|Ga0066667_10002672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	7147	Open in IMG/M
3300018468\|Ga0066662_10874021	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300019873\|Ga0193700_1063708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	558	Open in IMG/M
3300019886\|Ga0193727_1107113	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300020006\|Ga0193735_1182706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300020015\|Ga0193734_1050653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	763	Open in IMG/M
3300020018\|Ga0193721_1031189	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300020018\|Ga0193721_1071739	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300021086\|Ga0179596_10200847	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300021418\|Ga0193695_1023948	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300021418\|Ga0193695_1043509	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300023058\|Ga0193714_1016081	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300025915\|Ga0207693_11024472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	629	Open in IMG/M
3300025922\|Ga0207646_11085969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	705	Open in IMG/M
3300025931\|Ga0207644_11051444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300026305\|Ga0209688_1079345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	593	Open in IMG/M
3300026308\|Ga0209265_1001555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	6854	Open in IMG/M
3300026310\|Ga0209239_1256325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	603	Open in IMG/M
3300026322\|Ga0209687_1292693	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300026323\|Ga0209472_1238842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	584	Open in IMG/M
3300026323\|Ga0209472_1243770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	576	Open in IMG/M
3300026330\|Ga0209473_1079381	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300026331\|Ga0209267_1051936	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300026334\|Ga0209377_1053794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1788	Open in IMG/M
3300026529\|Ga0209806_1142060	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300026536\|Ga0209058_1160063	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300026536\|Ga0209058_1339095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	519	Open in IMG/M
3300026540\|Ga0209376_1054954	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300026540\|Ga0209376_1248221	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300026551\|Ga0209648_10075947	All Organisms → cellular organisms → Bacteria	2817	Open in IMG/M
3300026741\|Ga0207510_101845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	693	Open in IMG/M
3300027018\|Ga0208475_1009358	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300027846\|Ga0209180_10571470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	627	Open in IMG/M
3300028768\|Ga0307280_10122300	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300028791\|Ga0307290_10219868	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300028807\|Ga0307305_10130853	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300028878\|Ga0307278_10414894	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	591	Open in IMG/M
3300028881\|Ga0307277_10350058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	658	Open in IMG/M
3300028885\|Ga0307304_10019580	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300031122\|Ga0170822_12802382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1688	Open in IMG/M
3300031231\|Ga0170824_125014062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1506	Open in IMG/M
3300031573\|Ga0310915_11167612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	533	Open in IMG/M
3300031716\|Ga0310813_10857592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	821	Open in IMG/M
3300031744\|Ga0306918_10926315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	678	Open in IMG/M
3300031820\|Ga0307473_10590355	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300031879\|Ga0306919_11068065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	616	Open in IMG/M
3300031910\|Ga0306923_10713495	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300031942\|Ga0310916_11743131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	503	Open in IMG/M
3300031945\|Ga0310913_10724501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	703	Open in IMG/M
3300031947\|Ga0310909_10371028	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300031954\|Ga0306926_12965795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	508	Open in IMG/M
3300031962\|Ga0307479_10767159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	941	Open in IMG/M
3300032180\|Ga0307471_100304487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1682	Open in IMG/M
3300032205\|Ga0307472_101031632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	773	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.84%
Host-Associated	Host-Associated	3.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.84%
Plants	Host-Associated → Plants	3.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.16%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.87%
Loam	Environmental → Terrestrial → Soil → Loam	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.27%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026741	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-C (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_03046330	2170459024	Grass Soil	LAIYAVQPFPGKLIIYGSVSGLIEMVIVGAIVGAIYKPASARTP
JGI1027J12803_1011763792	3300000955	Soil	GMRLGFYAVQPIPGKLIFYGSIGGIIEMVIVGAMVGAIYKPAPSRTS*
JGIcombinedJ43975_100982642	3300002899	Soil	VYAVQPFPGKLLIYASIGGLIEMIITGAIVGAIYKPAPARSSSQ*
Ga0062593_1021642332	3300004114	Soil	LGFYAVQPFPGKLIFYGSVSGLIEMIIVGAIVGAIYKPAPTRMP*
Ga0062593_1028875482	3300004114	Soil	IAAIGMRLAIYAVQPFPGKLIIYGSISGLIEMTIVGAIVGAIYKPAAARTS*
Ga0062594_1010484001	3300005093	Soil	LLAIGARMMIYAVQPFTAKLIVLWSVAGLIEMIVTGAMVGAIYRKDE*
Ga0066672_100910132	3300005167	Soil	MRMAMYVVQPFPGKLILYGSASDLIEMIITGAIVGAIYKPRIKTTT*
Ga0066677_107376501	3300005171	Soil	GFYAVQPIPGKLIVYGSFGGIIEMVLFGAMVGAIYKPTSAWQP*
Ga0066683_100944861	3300005172	Soil	AIGMRLAIYAVQPFPGKLIVYGSISGLIEMIIVGAIVAAIYKPAPARMST*
Ga0066683_106569521	3300005172	Soil	LGFYAVQPFPGKLVFYGSVSGLIEMIIVGAIVGAIYKPATMRTA*
Ga0066679_103547171	3300005176	Soil	VLLEIAAIGMRMGFYAVQPFPGKLIVYGSISGLIEMIIVGAIVGAIYKPASARTP*
Ga0066688_101330232	3300005178	Soil	MRMGVYAVQPFPRKLLIYASIGGLIEMIIFGAIVGAIYKPVATRSSSQ*
Ga0066688_102033961	3300005178	Soil	IGMRMGVYAVQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKPPAASTP*
Ga0066684_102181211	3300005179	Soil	RLGFYAVQPIPGKLIVYGSIGAVIEMVIVGAMVGGIYKPASVRQP*
Ga0066678_111030241	3300005181	Soil	IVLEIAAIGMRLAIYAVQPFPGKLIVYGSISGLIEMIIVGAIVAAIYKPAPARMST*
Ga0066671_108426331	3300005184	Soil	MRLGFYAVQPIPGKLIVYGSFGGIIEMVIVGAMVGAIYKPTSAWQP*
Ga0066388_1013225272	3300005332	Tropical Forest Soil	LLEIGAIGMRLGFYAVQPFPGKLVLYGSIGGLIEMVIVGAIVGAIYTPASARSSSQ*
Ga0070689_1009293262	3300005340	Switchgrass Rhizosphere	AIGMRLGFYAVQPIPGKLIFYGSIGGIIEMVIVGAMVGAIYKPAPAGSSSQ*
Ga0066682_103338412	3300005450	Soil	LEIAAIGMRLGFYAVQPFPGKLIFYGSASGLIEMIIVGATVGAIYKPAPARTA*
Ga0066682_104234951	3300005450	Soil	MRMGFYAVQPIPGNLLFYGSLSGVIEMIIVGAIVGAICKPATARTS*
Ga0070698_1017777652	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GVLLEIAAIGMRMGFYAVQPIPGNLLFYGSLSGVIEMIIVGAIVGGIYKPAAARTS*
Ga0066701_101120963	3300005552	Soil	AVQPFPGKLIVYGSVSGLIEMVIVGAIVGAIYKPASARTP*
Ga0066661_101124183	3300005554	Soil	MRMGVYAVQPFPRKLLIYASIGGLIEMIIFGAIVGAIYKPVAARSSSQ*
Ga0066698_104771932	3300005558	Soil	VIYAVQPLPGKLILYGSVSGLIEMIIVGAIVGAIYKPASVRTP*
Ga0070664_1012375752	3300005564	Corn Rhizosphere	IPGKLIFYGSIGGMIEMVIVGAMVGAIYKPASGKAVS*
Ga0066691_100262401	3300005586	Soil	AIYAVQPFPGKLIVYGSVSGLIEMVIVGAIVGAIYKPASARTS*
Ga0066706_102816011	3300005598	Soil	MRLGFYAVQPVPGKLIVYGSFGGIIEMVIVGAMVGAIYKPTSAWQP*
Ga0066903_1017154104	3300005764	Tropical Forest Soil	MCLGFYAVQPIPGKLILYGSIGGLIEMVIVGAMVGAIYK
Ga0066903_1040100442	3300005764	Tropical Forest Soil	IPGRLILYGSIGGLIEMLIVGAMLGAIYKPASAGTS*
Ga0066903_1075056881	3300005764	Tropical Forest Soil	GFYAVQPIPGKLIVYGSIGGLIEMVIVGAVVGVIYKPASGKAVS*
Ga0066651_104830421	3300006031	Soil	MRMGIYAIQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKPSAPSFPPGGS*
Ga0066652_1004089672	3300006046	Soil	AVQPIPGKLILYGSVSGIIEMIIVGAIVGAIYKPPAARAS*
Ga0066652_1012226602	3300006046	Soil	MRMGFYAVQPIPGKLIFYGSVSGIIEMIIVGAIVGAIYKPAVARMS*
Ga0070715_105455961	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	AAIGMRMGVYAVQPFPGNLLIYASIGGLIEMVITGAIVGAIYKRPAARTP*
Ga0066660_100197054	3300006800	Soil	MRMGVYAVQPLPRKLLIYASIGGLIEMIIFGAIVGAIYKPVATRSSSQ*
Ga0066660_111261752	3300006800	Soil	VQPFPGKLLIYASIGGLIEMVITGAIVGAIYKPPAASTP*
Ga0079219_105130142	3300006954	Agricultural Soil	PIPGKLIFYGSISGIIEMIIVGAIVGAIYKPAVARMS*
Ga0099791_102229621	3300007255	Vadose Zone Soil	GFYAVQPIPGKLLFYGSLSGVIEMIIVGAIVCGIYTPAAARTS*
Ga0099793_104633402	3300007258	Vadose Zone Soil	AVQPIPGKLILYGSMSGIIEMIIVGAIYKPPAARAS*
Ga0066710_1048606372	3300009012	Grasslands Soil	LEIAAIGMRMGIYAIQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKLGAPSFPPGPS
Ga0099829_111306031	3300009038	Vadose Zone Soil	TYAVQPFPGQLIAYWSIGALVEMAIVGAIVGAIYKPAVPRN*
Ga0099827_113716922	3300009090	Vadose Zone Soil	PGKLLIYASIGGLIEMVITGAIVGAIYKPASQTTT*
Ga0105245_103725672	3300009098	Miscanthus Rhizosphere	MRLGFYAVQPIPGKLIFYGSIGGMIEMVIVGAMVGAIYKPASGKAVS*
Ga0066709_1016518091	3300009137	Grasslands Soil	GMRMGIYAIQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKPGAPSFPPGPS*
Ga0075423_108990161	3300009162	Populus Rhizosphere	RMGVYAVQPYPGKLLIYGSIGGLIEMIITGAIVGAIYKPASSEEALS*
Ga0126380_106100941	3300010043	Tropical Forest Soil	LGFYAVQPFPGKLVLYGSIGGLLEMIIVGAIVGAIYKPAAVQKP*
Ga0126384_123411931	3300010046	Tropical Forest Soil	GVLLEIAAIGMRLGFYAVQPIPGKLIFYGSLSGLIEMIIVGAMVGAIYKPARLRAA*
Ga0134082_100059937	3300010303	Grasslands Soil	AVQPIPGKLIFYGSVSGIIEMIIVGAIVGAIYKPPAARAS*
Ga0134067_100039871	3300010321	Grasslands Soil	LLEIAAIGMRLAIYAVQPFPAKLIIYGSISGLFEMIIVGAIVGAICKPASGRTA*
Ga0134086_104453662	3300010323	Grasslands Soil	EIAAIGMRMGFYAVQPIPGKLIFYGSLSGVIEMIIVGAIVGAIYKPAAARTS*
Ga0134064_104753682	3300010325	Grasslands Soil	MLEIAAIGMRLVLYAVQPFPGKLIVYGSVSGLIEMIIVGAIVGAIYKPTAVRAS*
Ga0134065_101719841	3300010326	Grasslands Soil	EIAAIGMRMGVYAVQPFPGKLLIYASIGGLIEMIITGAIVGAIYKPGATQTRS*
Ga0134111_101172814	3300010329	Grasslands Soil	MLEIAAIGMRLAIYAVQPFPGKLIVYGSISGLIEMIIVGAIVAA
Ga0134062_103629022	3300010337	Grasslands Soil	IAAIGMRMGIYAIQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKPGAPSFPPGPS*
Ga0126376_104552011	3300010359	Tropical Forest Soil	AIGMRLGFYAVQPIPAKLILYGSIGGIIEMVILGAMVGAIYKPASSRPS*
Ga0126376_114229372	3300010359	Tropical Forest Soil	LLEIAAIGMRLGFYAVQPIPGKLILYGSISGLIEMIIVGAIVGAIYKPAPARSS*
Ga0126372_110487852	3300010360	Tropical Forest Soil	MRLGFYAVQPIPGKLILYGSIGGLIEMVIVGAMVGAIYKPASKGTN*
Ga0126378_110300291	3300010361	Tropical Forest Soil	MRMGFYAVQPIPGKLILYGSAAGLIEMIIVGALVGAIYKPASARTS*
Ga0126379_117173232	3300010366	Tropical Forest Soil	EIAAIGMRLGFYAVQPIPGRLILYGSIGGLIEMVIVGAMLGAIYKPASAGTS*
Ga0137383_110517272	3300012199	Vadose Zone Soil	RMGFYAVQPIPGNLLFYGSLSGVIEMIIVGAIVGAICKPATARTS*
Ga0137382_106556851	3300012200	Vadose Zone Soil	PIPGKLILYGSVSGIIEMIIVGAIVGAIYKPPAAPAS*
Ga0137382_111736431	3300012200	Vadose Zone Soil	AIGMRLGFYAVQPFPGKLIFYGSASGLIEMIIVGAIVGAIYKPASPKAVT*
Ga0137365_108398741	3300012201	Vadose Zone Soil	IAAIGMRMGIYAIQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKPSAPSFPLGAS*
Ga0137363_109516672	3300012202	Vadose Zone Soil	AVQPFPGKLLIYASIGGLIEMIITGAIVGAIYKPAARRAP*
Ga0137363_112422852	3300012202	Vadose Zone Soil	MRLAIYAVQPFPGKLIVYGSVSGLIEMIIVGAIVGAIYKPASVRTS*
Ga0137362_103898651	3300012205	Vadose Zone Soil	LEIAAIGMRMGIYAVQPFPGTLIVYGSVSGLIEMIIVGAMVGAIYKPAAARSLS*
Ga0137381_117320771	3300012207	Vadose Zone Soil	PFPGKLLIYASVGGLIEMIITGAIVGAIYKPASASTP*
Ga0137381_117715792	3300012207	Vadose Zone Soil	RMGFYAVQPIPGKLILYGSVSGIIEMIIVGAIVGAIYKPPAAPAS*
Ga0137376_101321441	3300012208	Vadose Zone Soil	LLEIAAIGMRLGFYAVQPFPGKLIFYGSASGLIEMIIVGAIVGAIYKPAPARTSG*
Ga0137376_101628283	3300012208	Vadose Zone Soil	FYAVQPIPGKLILYGSIGGLVEMVIVGAMVGAIYKPVPPRTA*
Ga0137376_104425661	3300012208	Vadose Zone Soil	FYAVQPIPGKLILYGSMSGLIEMIIVGAIVGAIYKPAATQTP*
Ga0137376_117636132	3300012208	Vadose Zone Soil	PFPGKMIVYGCISGLIEMIIVGAIVGAIYKPAAARSS*
Ga0137378_113857082	3300012210	Vadose Zone Soil	VLLEIAAIGMRMGVYAVQPFPGKLLIYASIGGLIEMIIVGAIVGAIYKPAPARSSSR*
Ga0137377_112150201	3300012211	Vadose Zone Soil	IAAIGMRMGFYAVQPIPGNLLFYGSLSGVIEMIIVGAIVGAICKPATARTS*
Ga0137387_106278692	3300012349	Vadose Zone Soil	LEIAAIGMRLAIYAVQPFPGKLIVYGSISGLIEMIIVGAIVAAIYKPAPARMST*
Ga0137366_107521321	3300012354	Vadose Zone Soil	ILLEIAAIGMRLAIYAVQPFPGKLIVYGSVSGLIEMIIVGAIVGAIYKPASARTP*
Ga0137375_102425911	3300012360	Vadose Zone Soil	PEKLIVYGSASGLIEMVIVGAIVGAIYKPASARTP*
Ga0137360_101149753	3300012361	Vadose Zone Soil	GFYAVQPIPGKLILYGSVSGIIEMIIVGAIVGAIYKPPAAPAS*
Ga0137361_118772292	3300012362	Vadose Zone Soil	PGKLVLYWSTGGLIEMIVTGAIVGAIYKPRVSRTP*
Ga0137395_103805282	3300012917	Vadose Zone Soil	LEIAAIGMRMGFYAVQPIPGKLILYGSVSGIIEMIIVGAIVGAIYKPPAAPAS*
Ga0137419_111502432	3300012925	Vadose Zone Soil	EIAAIGMRMGFYAVQPIPGKLLFYGSLSGVIEMIIVGAIVGGIYTPAAARTS*
Ga0137416_116531682	3300012927	Vadose Zone Soil	EIAAIGMRLAIYAVQPFPGKLIVYGSISGLIEMIIVGAIVGAIYKPGSARKP*
Ga0137416_120238281	3300012927	Vadose Zone Soil	GKLIFYGSVSGIIEMIIVGAIVGAIYKPAVARTS*
Ga0137416_122236801	3300012927	Vadose Zone Soil	AAIGMRMGFYAVQPIPGKLILYGSVSGIIEMIIVGAIVGAIYKPPAARAS*
Ga0137404_100562363	3300012929	Vadose Zone Soil	MLEIAAIAMRMGVYAAQPFPGKLLIYASIGGLIEMIIVGAIVGAIYKPAPARSSSQ*
Ga0137407_101507074	3300012930	Vadose Zone Soil	MLEIAAIGMRMGVYAAQPFPGKLLIYASIGGLIEMIIVGAIVGAIYKPASARSSSQ*
Ga0137407_102475423	3300012930	Vadose Zone Soil	QPFPGKLLIYASIGGLIEMIIVGAIVGAICKPAPARSSSR*
Ga0126375_107312872	3300012948	Tropical Forest Soil	GFYAVQPFPGKLIVYGSISGLIEMIIVGAIVGAIYKPASARTP*
Ga0126375_115681762	3300012948	Tropical Forest Soil	VLLEIAAIGMRLGFYAVQPIPGRLILYGSIGGLIEMVIVGAMVGAIYKPAATGAS*
Ga0126369_127283261	3300012971	Tropical Forest Soil	EIAGVGMRLGFYAVQPIPGKLILYGSLSGLIEMIIVGAMVGAIYKPARLRSA*
Ga0134077_100112075	3300012972	Grasslands Soil	EIAAIGMRLGFYAVQPFPGKLIFYGSASGLIEMIIVGAIVGAIYKPAPARTPR*
Ga0134110_103193991	3300012975	Grasslands Soil	MRLGFYAVQPIPGKLIVYGSFGGIIEMVIVGAMVGAIYK
Ga0157374_107040611	3300013296	Miscanthus Rhizosphere	RLGFYAVQPMPRKLSFYGSIGGIIEMVIVGAMVGAIYKPAPAGSSSQ*
Ga0134081_100395032	3300014150	Grasslands Soil	LEIAAIGMRMGIYAIQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKPGAPSFPPGPS*
Ga0134081_100439282	3300014150	Grasslands Soil	LLEIAAIGMRLAIYAVQPFPAKLIIYGSISGLIEMIIVGAIVGAIYKPAVGRTA*
Ga0137418_100907904	3300015241	Vadose Zone Soil	MRMGFYAVQPIPGKLLFYGSLSGVIEMIIVGAIVGGIYTPAAARTS*
Ga0137403_101501951	3300015264	Vadose Zone Soil	MLEIAAIAMRMGVYAAQPFPGKLLIYASIGGLIEMIIVGAIVGAIYKPA
Ga0134073_103633401	3300015356	Grasslands Soil	IGMRLGFYAVQPIPGKLIVYGSFGGIIEMVIVGAMVGAIYKPTSAWQP*
Ga0134089_104126362	3300015358	Grasslands Soil	AVQPIPGNLLFYGSLSGVIEMIIVGAIVGGIYKPAAARTS*
Ga0182041_109237931	3300016294	Soil	AIGMRMGFYAVQPFPGKLIVYGSISGLIEMIIVGAIVGAIYKPTSERTP
Ga0182032_110210152	3300016357	Soil	FYAVQPIPGKLIVYGSIGGLIEMVIVGAMVGAIYKPASGKAVS
Ga0182034_109732982	3300016371	Soil	GILLEIAAIGMRMGFYAVQPFPGKLIVYGSISGLIEMIIVGAIVGAIYKPTSERTP
Ga0182037_120317711	3300016404	Soil	VQPIPGRLILYGSIGGLIEMVIVGAMVGAIYKPASAGTS
Ga0066655_100775871	3300018431	Grasslands Soil	IPGKLILYGSMSGLIEMIIVGAIVGAIYKPAATQTP
Ga0066667_1000267210	3300018433	Grasslands Soil	IYAVQPFPGKLIVYGSISGLIEMIIVGAIVAAIYKPAPARMST
Ga0066662_108740211	3300018468	Grasslands Soil	AGSPAGIAAIGMRLGFYAVQPVPGKLIVYGSFGGIIEMVIVGAMVGTIYKPTSAWQP
Ga0193700_10637082	3300019873	Soil	GVLLEIAAIGMRMGFYAVQPFPGKLILYGSVSGIIEMIIVGAIVGAIYKPGPVKAVS
Ga0193727_11071132	3300019886	Soil	IGMRMGVYAVQPFPGKLLIYASIGGLIEMIITGAIVGAIYKPAPAQSSSQ
Ga0193735_11827062	3300020006	Soil	AIGMRMGFYAVQPFPGNLIVYGSVGGLIEMIIVGAIVGAIYKPGAPSFPPGPS
Ga0193734_10506532	3300020015	Soil	GMRLGFYAVQPFPGKLIFYGSASGLIEMIIVGAIVGAIYKPATMRTA
Ga0193721_10311892	3300020018	Soil	EIAAIGMRLGFYAVQPFPGKLILYGSASGLIEMIIVGAIVGAIYKPAPARTA
Ga0193721_10717391	3300020018	Soil	VQPFPAKLIVYGSVSGLIEMIIVGAIVGAIYKPASVRTS
Ga0179596_102008472	3300021086	Vadose Zone Soil	VRMGIYAVQPFPGTLIVYGSVSGLIEMIIVGAMVGAIYKPAAARSLS
Ga0193695_10239482	3300021418	Soil	GMRMGVYAVQPFPGKLLVYASIGGLIEMVIAGAIVGMIYKPARTP
Ga0193695_10435093	3300021418	Soil	MGFYAVQPISGNLLFYGSLSGVIEMIIVGAIVGGIYKPAAARTS
Ga0193714_10160812	3300023058	Soil	AVQPIPGNLIFYGSVSGIIEMIIVGAIVGAIYKPAVARTS
Ga0207693_110244721	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QPIPGKLIFYGSIGGIIEMVIVGAMVGAIYKPAPAGSSSQ
Ga0207646_110859691	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PGKLLIYASIGGLIEMIITGAIVGAIYKPVPTRSSSQ
Ga0207644_110514442	3300025931	Switchgrass Rhizosphere	VQPIPAKLIFYGSIGGIIEMVIVGAMVGAIYKPAPAGSSSQ
Ga0209688_10793452	3300026305	Soil	LEIAAIGMRLGFYAVQPIPGKLIVYGSFGGIIEMVIVGAMVGGIYKPASVRQP
Ga0209265_10015551	3300026308	Soil	IPGKLILYGSVSGIIEMIIVGAIIGAIYKPPAARAS
Ga0209239_12563251	3300026310	Grasslands Soil	AIGMRLGFYAVQPIPGKLILYGSIGGLVEMVIVGAMVGAIYKPVPPRTA
Ga0209687_12926931	3300026322	Soil	MRMGVYAVQPFPRKLLIYASIGGLIEMIIFGAIVGAIYKPVAARSSSQ
Ga0209472_12388422	3300026323	Soil	EIAAIGMRLGFYAVQPFPGKLIFYGSASGLIEMIIVGAIVGAIYKPAPARTPG
Ga0209472_12437701	3300026323	Soil	AAIGMRMGFYAVQPIPGKLIFYGSVSGIIEMIIVGAIVGAIYKPAVARMS
Ga0209473_10793812	3300026330	Soil	SGMRLGFYAVQPVPGKLIVYGSFGGIIEMVIVGAMVGAIYKPTSAWQP
Ga0209267_10519363	3300026331	Soil	MRMGVYAVQPFPRKLLIYASIGGLIEMIIFGAIVGAIYKPVATRSSSQ
Ga0209377_10537944	3300026334	Soil	MGVYAVQPFPRKLLIYASIGGLIEMIIFGAIVGAIYKPVATRSSSQ
Ga0209806_11420601	3300026529	Soil	VQPFPRKLLIYASIGGLIEMIIFGAIVGAIYKPVATRSSSQ
Ga0209058_11600631	3300026536	Soil	GMRLVIYAVQPLPGKLILYGSVSGLIEMIIVGAIVGAIYKPASVRTP
Ga0209058_13390951	3300026536	Soil	AAIGMRMGIYAIQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKPSAPSFPLGAS
Ga0209376_10549541	3300026540	Soil	AIGMRLVIYAVQPLPGKLILYGSVSGLIEMVIVGAIVGAIYKPASVRTP
Ga0209376_12482212	3300026540	Soil	LGFYAVQPFPGKLILYGSASGLIEMIIVGAIVGAIYKPAPARTPG
Ga0209648_100759471	3300026551	Grasslands Soil	LEIAAIGMRMGIYAVQPFPGTLIVYGSVSGLIEMIIVGAVGAIYKPAAARSLS
Ga0207510_1018451	3300026741	Soil	GMRLGFYAVQPIPGKLIFYGSIGGIIEMVIVGAMVGAIYKPAPSRTS
Ga0208475_10093582	3300027018	Soil	VQPFPGKLIIYGSISGLIEMIIVGAIVGAIYKPAAARTP
Ga0209180_105714701	3300027846	Vadose Zone Soil	GVLLEIAAIGMRMGFYAVQPIPGKLILYGSVSGIIEMIIVGAIVGAIYKPPAAPAS
Ga0307280_101223003	3300028768	Soil	MRLGFYAVQPIPGKLILYGSISGLVEMIIVGALVGAIYKPASPRTP
Ga0307290_102198681	3300028791	Soil	QPFPGKLIFYGSASGLIEMIIVGAIVGAIYKPARTPG
Ga0307305_101308532	3300028807	Soil	YAVQPFPGKLIFYGSASGLIEMIIVGAIVGAIYKPAPARTPG
Ga0307278_104148941	3300028878	Soil	EIAAIGMRMGIYAIQPFPGKLIVYGSVGGLIEMIIVGAIVGAIYKPGAPSFPPGPS
Ga0307277_103500581	3300028881	Soil	IAAIGMRMAIYAVQPFPGKLLVYGSISGLIEMIVVGAIVGAIYRPAAAKAVS
Ga0307304_100195801	3300028885	Soil	IGMRMGFYAVQPFPGKLILYGSVSGIIEMIIVGAIVGAIYKPGPVKAVS
Ga0170822_128023821	3300031122	Forest Soil	QPFPGKLVICASIGGLIEMIITGAIVGAIYKRPAARTP
Ga0170824_1250140621	3300031231	Forest Soil	LLIYASIGGLIEMILTGAIVGAIYKSAATRTPSDN
Ga0310915_111676121	3300031573	Soil	PIPGKLIVYGSIGGLIEMVIVGAMVGAIYKPASGKAVS
Ga0310813_108575921	3300031716	Soil	AIGMRLGFYAVQPIPGKLIFYGSIGGIIEMVIVGAMVGAIYKPAPSRTS
Ga0306918_109263151	3300031744	Soil	LGVLLEIAAIGMRLGFYAVQPIPGRLILYGSIGGLIEMVIVGAMVGAIYKPASAGTS
Ga0307473_105903551	3300031820	Hardwood Forest Soil	AIGMRLAIYAVQPFPGKLILYGSVSGLIEMVIVGAIVGAIYKPASARTP
Ga0306919_110680652	3300031879	Soil	IAAIGMRLGFYAVQPFPGKLIFYGSASGLIEMIIVGAIVGAIYKPAPARTSG
Ga0306923_107134952	3300031910	Soil	EIAAIGMRMAVYAVQPFPGKLIVYGSMSGLIEMIFVGVIVGAIYKPAPARTP
Ga0310916_117431311	3300031942	Soil	QLIPGKLILYGSIGGLIEMVIVGAMVGAIYKPASAGTS
Ga0310913_107245012	3300031945	Soil	IGMRLGFYAVQPIPGRLILYGSIGGLIEMVIVGAMVGAIYKPASAGTS
Ga0310909_103710281	3300031947	Soil	AVQPFPGKLIVYGSISGLIEMIIVGAIVGAIYKPTSERTP
Ga0306926_129657951	3300031954	Soil	IGMRLGFYALQPIPGKLILYGSIGGVIEMIIVGAMVGAIYKPASPRTS
Ga0307479_107671591	3300031962	Hardwood Forest Soil	GIMLEIAAIGMRLAIYAVWPYPGKLIVYGSIAGLIEMVITGAIVGAIYKPRTTASA
Ga0307471_1003044873	3300032180	Hardwood Forest Soil	AVQPFPGNLLIYASIGGLIEMVITGAIVGAIYKRPAARTP
Ga0307472_1010316321	3300032205	Hardwood Forest Soil	IGSRMAIYAVQPFPGKLLVYGSMSGVVEMIIIGAIVGAIYRPSSTSSGVSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042594

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences