NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F042570

Metagenome / Metatranscriptome Family F042570

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F042570
Family Type Metagenome / Metatranscriptome
Number of Sequences 158
Average Sequence Length 63 residues
Representative Sequence MPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVIFL
Number of Associated Samples 129
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 3.85 %
% of genes near scaffold ends (potentially truncated) 67.72 %
% of genes from short scaffolds (< 2000 bps) 84.81 %
Associated GOLD sequencing projects 123
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Eukaryota (94.304 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent
(11.392 % of family members)
Environment Ontology (ENVO) Unclassified
(25.316 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(39.241 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 64.37%    β-sheet: 0.00%    Coil/Unstructured: 35.63%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF00137ATP-synt_C 15.19
PF00410Ribosomal_S8 4.43
PF00164Ribosom_S12_S23 3.16
PF00189Ribosomal_S3_C 1.90
PF00146NADHdh 1.27
PF00033Cytochrome_B 0.63
PF00329Complex1_30kDa 0.63
PF00346Complex1_49kDa 0.63
PF00507Oxidored_q4 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG0636FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit KEnergy production and conversion [C] 15.19
COG0096Ribosomal protein S8Translation, ribosomal structure and biogenesis [J] 4.43
COG0092Ribosomal protein S3Translation, ribosomal structure and biogenesis [J] 1.90
COG0650Formate hydrogenlyase subunit HyfCEnergy production and conversion [C] 1.27
COG1005NADH:ubiquinone oxidoreductase subunit 1 (chain H)Energy production and conversion [C] 1.27
COG0649NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)Energy production and conversion [C] 0.63
COG0838NADH:ubiquinone oxidoreductase subunit 3 (chain A)Energy production and conversion [C] 0.63
COG0852NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)Energy production and conversion [C] 0.63
COG1290Cytochrome b subunit of the bc complexEnergy production and conversion [C] 0.63
COG3261Ni,Fe-hydrogenase III large subunitEnergy production and conversion [C] 0.63
COG3262Ni,Fe-hydrogenase III component GEnergy production and conversion [C] 0.63


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.84 %
UnclassifiedrootN/A3.16 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003430|JGI25921J50272_10117103All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea561Open in IMG/M
3300003682|Ga0008456_1007336All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300003684|Ga0005851_1012476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Dermatophilus → Dermatophilus congolensis527Open in IMG/M
3300004240|Ga0007787_10210227All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea949Open in IMG/M
3300004463|Ga0063356_101069405All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1159Open in IMG/M
3300004463|Ga0063356_101482368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Dermatophilus → Dermatophilus congolensis1003Open in IMG/M
3300004787|Ga0007755_1436046All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea552Open in IMG/M
3300004790|Ga0007758_10015489All Organisms → cellular organisms → Eukaryota1000Open in IMG/M
3300004790|Ga0007758_11339114All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea670Open in IMG/M
3300004793|Ga0007760_11453784All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia2086Open in IMG/M
3300004795|Ga0007756_10111336Not Available644Open in IMG/M
3300004807|Ga0007809_10105672All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea855Open in IMG/M
3300005527|Ga0068876_10148992All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300005662|Ga0078894_10282176All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia1507Open in IMG/M
3300005662|Ga0078894_10966891All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea735Open in IMG/M
3300005961|Ga0075157_10250450All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea682Open in IMG/M
3300005987|Ga0075158_10020423All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae → Stylonychinae4024Open in IMG/M
3300005988|Ga0075160_10010944All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae → Stylonychinae → Stylonychia → Stylonychia lemnae4941Open in IMG/M
3300005988|Ga0075160_10096645All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1628Open in IMG/M
3300005989|Ga0075154_10259579All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea979Open in IMG/M
3300005989|Ga0075154_10598505All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Sordariomycetidae → Sordariales → Sordariaceae → Neurospora → Neurospora crassa598Open in IMG/M
3300006056|Ga0075163_10032400All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea6557Open in IMG/M
3300006072|Ga0007881_1087833All Organisms → cellular organisms → Eukaryota783Open in IMG/M
3300006164|Ga0075441_10296642All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Glomerellales → Plectosphaerellaceae → Verticillium → Verticillium alfalfae591Open in IMG/M
3300006394|Ga0075492_1377685All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea800Open in IMG/M
3300006396|Ga0075493_1356752All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium2628Open in IMG/M
3300007230|Ga0075179_1406715All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea512Open in IMG/M
3300007232|Ga0075183_10144956All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1659Open in IMG/M
3300007233|Ga0075178_1649102All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea700Open in IMG/M
3300007233|Ga0075178_1716453All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea782Open in IMG/M
3300007237|Ga0075177_1001941All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea896Open in IMG/M
3300007241|Ga0075170_1016316All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea822Open in IMG/M
3300007244|Ga0075167_10595096All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea524Open in IMG/M
3300007266|Ga0101450_114354All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia3878Open in IMG/M
3300008938|Ga0103741_1049882All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea802Open in IMG/M
3300008993|Ga0104258_1027286All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1069Open in IMG/M
3300008993|Ga0104258_1109281All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea517Open in IMG/M
3300009154|Ga0114963_10510200All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea639Open in IMG/M
3300009249|Ga0103862_1066169All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea525Open in IMG/M
3300009420|Ga0114994_10905055Not Available572Open in IMG/M
3300009432|Ga0115005_10093164All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea2312Open in IMG/M
3300009436|Ga0115008_10756198All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea709Open in IMG/M
3300009544|Ga0115006_10706957All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium cf. sulcatum886Open in IMG/M
3300009592|Ga0115101_1772155All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea733Open in IMG/M
3300009592|Ga0115101_1856552All Organisms → cellular organisms → Eukaryota2385Open in IMG/M
3300009599|Ga0115103_1019664All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea588Open in IMG/M
3300009599|Ga0115103_1588486All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea4094Open in IMG/M
3300009599|Ga0115103_1729494All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → unclassified Strombidium → Strombidium sp.1839Open in IMG/M
3300009599|Ga0115103_1794594All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium2547Open in IMG/M
3300009606|Ga0115102_10386986All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1815Open in IMG/M
3300009608|Ga0115100_10689377All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium793Open in IMG/M
3300009608|Ga0115100_10777428All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea907Open in IMG/M
3300009608|Ga0115100_10878012All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea849Open in IMG/M
3300009677|Ga0115104_10205860All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea691Open in IMG/M
3300009677|Ga0115104_10268414All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea556Open in IMG/M
3300009677|Ga0115104_11042111All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea783Open in IMG/M
3300009679|Ga0115105_10880730All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea835Open in IMG/M
3300009679|Ga0115105_10937587All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium560Open in IMG/M
3300010200|Ga0127507_1288373All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea838Open in IMG/M
3300010885|Ga0133913_11794226All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella1536Open in IMG/M
3300012212|Ga0150985_110531885All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia1853Open in IMG/M
3300012212|Ga0150985_120292113All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea917Open in IMG/M
3300012212|Ga0150985_122822182All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea535Open in IMG/M
3300012212|Ga0150985_122823927All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea906Open in IMG/M
3300012408|Ga0138265_1342163All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea2484Open in IMG/M
3300012413|Ga0138258_1297241All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea806Open in IMG/M
3300012414|Ga0138264_1057665All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea972Open in IMG/M
3300012414|Ga0138264_1416022All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea781Open in IMG/M
3300012415|Ga0138263_1318325All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea736Open in IMG/M
3300012416|Ga0138259_1588226All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea755Open in IMG/M
3300012417|Ga0138262_1400968All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea746Open in IMG/M
3300012417|Ga0138262_1655208All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea775Open in IMG/M
3300012418|Ga0138261_1458004All Organisms → cellular organisms → Eukaryota827Open in IMG/M
3300012469|Ga0150984_111476867All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea817Open in IMG/M
3300012707|Ga0157623_1184864All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea769Open in IMG/M
3300012729|Ga0157625_1062494All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea600Open in IMG/M
3300012730|Ga0157602_1299561All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea507Open in IMG/M
3300012731|Ga0157616_1326271All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea664Open in IMG/M
3300012763|Ga0138289_1213329All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea508Open in IMG/M
3300012765|Ga0138274_1136957All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea506Open in IMG/M
3300012766|Ga0138282_1054156All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea563Open in IMG/M
3300012954|Ga0163111_11510732All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea665Open in IMG/M
3300013870|Ga0181465_114034All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella950Open in IMG/M
3300014745|Ga0157377_10653870All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea757Open in IMG/M
3300015360|Ga0163144_10031445All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia10118Open in IMG/M
3300016723|Ga0182085_1226400All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea664Open in IMG/M
3300016731|Ga0182094_1018221All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea935Open in IMG/M
3300016734|Ga0182092_1063926All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea558Open in IMG/M
3300019261|Ga0182097_1168366All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea761Open in IMG/M
3300020070|Ga0206356_10241529All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea900Open in IMG/M
3300020077|Ga0206351_10222699All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea708Open in IMG/M
3300020081|Ga0206354_10546577All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea698Open in IMG/M
3300020183|Ga0194115_10174544All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1090Open in IMG/M
3300020190|Ga0194118_10040423All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia3181Open in IMG/M
3300020205|Ga0211731_11553421All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia3332Open in IMG/M
3300020221|Ga0194127_10125866All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1869Open in IMG/M
3300020548|Ga0208856_1038631Not Available641Open in IMG/M
3300021142|Ga0214192_1015068All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia2929Open in IMG/M
3300021350|Ga0206692_1639704All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium772Open in IMG/M
3300021355|Ga0206690_10921351All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium cf. sulcatum898Open in IMG/M
3300021359|Ga0206689_11061275All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea533Open in IMG/M
3300021404|Ga0210389_10132836All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1926Open in IMG/M
3300021404|Ga0210389_10711015All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea787Open in IMG/M
3300021857|Ga0213849_1077264All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea908Open in IMG/M
3300021857|Ga0213849_1141211All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea501Open in IMG/M
3300021951|Ga0222624_1022534All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea550Open in IMG/M
3300021951|Ga0222624_1586394All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea728Open in IMG/M
3300022467|Ga0224712_10435084All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea628Open in IMG/M
3300022523|Ga0242663_1134443All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Urostylidae → Urostyla → Urostyla grandis520Open in IMG/M
3300024555|Ga0255280_1021232All Organisms → cellular organisms → Eukaryota1355Open in IMG/M
3300024563|Ga0255236_1012682All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1945Open in IMG/M
3300024574|Ga0255275_1214912All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea509Open in IMG/M
3300025130|Ga0209594_1021834All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia2288Open in IMG/M
3300025388|Ga0208503_1028755All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea624Open in IMG/M
3300026434|Ga0247591_1106540All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea515Open in IMG/M
3300026462|Ga0247568_1086788All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea613Open in IMG/M
3300026571|Ga0255289_1116937All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea601Open in IMG/M
3300027183|Ga0208798_1034214All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea586Open in IMG/M
3300027687|Ga0209710_1276483All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea530Open in IMG/M
3300027720|Ga0209617_10191716All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia791Open in IMG/M
3300027760|Ga0209598_10204559All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea832Open in IMG/M
3300027769|Ga0209770_10397941All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea510Open in IMG/M
3300027779|Ga0209709_10301015All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea682Open in IMG/M
3300027781|Ga0209175_10002149All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae → Stylonychinae9306Open in IMG/M
3300027781|Ga0209175_10006112All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae → Stylonychinae → Stylonychia → Stylonychia lemnae5153Open in IMG/M
3300027781|Ga0209175_10290393All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea690Open in IMG/M
3300027786|Ga0209812_10391148All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Urostylidae → Urostyla → Urostyla grandis599Open in IMG/M
3300027804|Ga0209358_10367699All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea687Open in IMG/M
3300027849|Ga0209712_10557930All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea639Open in IMG/M
3300027883|Ga0209713_10612603All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea701Open in IMG/M
3300028095|Ga0247563_1077494All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium623Open in IMG/M
3300028110|Ga0247584_1104791All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea709Open in IMG/M
3300028110|Ga0247584_1169016All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea535Open in IMG/M
3300028137|Ga0256412_1113822All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea988Open in IMG/M
3300028137|Ga0256412_1129505All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea927Open in IMG/M
3300028282|Ga0256413_1036720All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia1654Open in IMG/M
3300028286|Ga0256331_1164178All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea502Open in IMG/M
3300028290|Ga0247572_1128949All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium629Open in IMG/M
3300028333|Ga0247595_1028051All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium913Open in IMG/M
3300028335|Ga0247566_1049462All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea698Open in IMG/M
3300028335|Ga0247566_1051279All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium686Open in IMG/M
(restricted) 3300028557|Ga0247832_1021678All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia4533Open in IMG/M
3300028772|Ga0302209_10072579All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea998Open in IMG/M
3300028909|Ga0302200_10177104All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1085Open in IMG/M
3300029908|Ga0311341_10091080All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea2101Open in IMG/M
3300030339|Ga0311360_10000461All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae → Oxytrichinae → Oxytricha → Oxytricha trifallax50885Open in IMG/M
3300030553|Ga0247645_1130001All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea614Open in IMG/M
3300030599|Ga0247630_1069973All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea732Open in IMG/M
3300030671|Ga0307403_10608907All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea592Open in IMG/M
3300030864|Ga0315855_119590All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea660Open in IMG/M
3300031021|Ga0102765_11583130All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea650Open in IMG/M
3300031029|Ga0074012_10030367All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea652Open in IMG/M
3300031474|Ga0170818_112664694All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea688Open in IMG/M
3300031589|Ga0307996_1034047All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1343Open in IMG/M
3300031621|Ga0302114_10261549All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea696Open in IMG/M
3300031784|Ga0315899_10036329All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella5186Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Wastewater EffluentEngineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent11.39%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine10.13%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake7.59%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater7.59%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine6.33%
Polar MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine5.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.43%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.80%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.16%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater3.16%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater2.53%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.53%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.53%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.53%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.53%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.53%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.90%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.27%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds1.27%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment1.27%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.27%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.27%
Ocean WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water1.27%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.63%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.63%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.63%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.63%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.63%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water0.63%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.63%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.63%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.63%
Marine Surface WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine Surface Water0.63%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.63%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.63%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.63%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.63%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.63%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.63%
Clean RoomEngineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room0.63%
Ice Edge, Mcmurdo Sound, AntarcticaEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Ice Edge, Mcmurdo Sound, Antarctica0.63%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003430Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SDEnvironmentalOpen in IMG/M
3300003682Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_03_M0_10 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003684Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA - 2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004787Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004790Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004793Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004795Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004807Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005961Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 B green DNAEngineeredOpen in IMG/M
3300005987Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B DNAEngineeredOpen in IMG/M
3300005988Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNAEngineeredOpen in IMG/M
3300005989Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B DNAEngineeredOpen in IMG/M
3300006056Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNAEngineeredOpen in IMG/M
3300006072Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006394Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006396Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007230Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C RNA (Eukaryote Community Metatranscriptome)EngineeredOpen in IMG/M
3300007232Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 A2 RNA (Eukaryote Community Metatranscriptome)EngineeredOpen in IMG/M
3300007233Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B RNA (Eukaryote Community Metatranscriptome)EngineeredOpen in IMG/M
3300007237Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 A RNA (Eukaryote Community Metatranscriptome)EngineeredOpen in IMG/M
3300007241Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B RNA (Eukaryote Community Metatranscriptome)EngineeredOpen in IMG/M
3300007244Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 RNA (Eukaryote Community Metatranscriptome)EngineeredOpen in IMG/M
3300007266Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ16 time pointEnvironmentalOpen in IMG/M
3300008938Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 4AEnvironmentalOpen in IMG/M
3300008993Marine microbial communities from eastern North Pacific Ocean - P1 free-livingEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009249Microbial communities of water from Amazon river, Brazil - RCM15EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009544Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M MetagenomeEnvironmentalOpen in IMG/M
3300009592Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009606Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009608Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009677Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009679Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010200Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)Host-AssociatedOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012408Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA23.A_192.20151118 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012413Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012414Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA16.ICE_1m.20151115 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012415Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA15.ICE_1m.20151115 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012416Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA9.A_24.20151111 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012417Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA13.B_72.20151113 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012418Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012707Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012729Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES157 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012730Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES126 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012731Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES145 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012763Freshwater microbial communities from Lake Simoncouche, Canada - S_140108_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012765Freshwater microbial communities from Lake Croche, Canada - C_131016_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012766Freshwater microbial communities from Lake Montjoie, Canada - M_140807_M_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300013870Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In3-11 gowning area SPAdes reassemblyEngineeredOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300016723Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041405ZT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016731Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016734Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041410CS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019261Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413BS (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020077Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020190Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surfaceEnvironmentalOpen in IMG/M
3300020196Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0mEnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020221Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100mEnvironmentalOpen in IMG/M
3300020548Freshwater microbial communities from Lake Mendota, WI - 13JUL2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021142Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnionEnvironmentalOpen in IMG/M
3300021350Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021355Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021359Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021857Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - WE:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023054Saline water microbial communities from Ace Lake, Antarctica - #335EnvironmentalOpen in IMG/M
3300024555Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024563Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024574Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025130Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)EnvironmentalOpen in IMG/M
3300025388Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300026434Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 53R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026462Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 17R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026571Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027183Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571 (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027720Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027760Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027769Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027781Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNA (SPAdes)EngineeredOpen in IMG/M
3300027786Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B DNA (SPAdes)EngineeredOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027849Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027883Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028095Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 11R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028110Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 43R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028137Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028282Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028286Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028290Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 25R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028333Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 60R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028335Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 14R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028557 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4mEnvironmentalOpen in IMG/M
3300028772Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_1EnvironmentalOpen in IMG/M
3300028909Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1EnvironmentalOpen in IMG/M
3300029908II_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030553Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb10 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030599Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030671Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-34 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030864Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T22 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031021Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031029Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFA (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031589Marine microbial communities from David Island wharf, Antarctic Ocean - #35EnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25921J50272_1011710323300003430Freshwater LakeVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIIVIFL*
Ga0008456_100733613300003682SeawaterKSSKMLALSIVFLPITGCAIATGLIFASLIYSISLAPYEEELLFNYAALGFAFVESFSFILFFAAAFIYFA*
Ga0005851_101247613300003684Freshwater And SedimentKVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVMFM*
Ga0007787_1021022723300004240Freshwater LakeMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIAVMII*
Ga0063356_10106940513300004463Arabidopsis Thaliana RhizosphereMPLMGCAVATGLIFASLIKGISYAPDMEETLFNYTTLGFAFVESFAFLLFFVAGLVLFI*
Ga0063356_10148236813300004463Arabidopsis Thaliana RhizosphereMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAGIVIFL*
Ga0007755_143604613300004787Freshwater LakeVIALSLTFLPLTGCAIATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFVAGIIYTF*
Ga0007758_1001548923300004790Freshwater LakeMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL*
Ga0007758_1133911413300004790Freshwater LakeASKVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVIFL*
Ga0007760_1145378423300004793Freshwater LakeMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVIFL*
Ga0007756_1011133623300004795Freshwater LakeCAVATGLVFSALIKGISYAPEQEDVLFNYSILGFAFIESFAFMLFAVAGIVYAF*
Ga0007809_1010567213300004807FreshwaterMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIAVLI
Ga0068876_1014899213300005527Freshwater LakeMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL*
Ga0078894_1028217633300005662Freshwater LakeAVATGLVFSALIKGISYAPEQEDVLFNYSILGFAFIESFAFMLFAVAGIVYAF*
Ga0078894_1096689113300005662Freshwater LakeMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNCTTLGFAFVESFAFLLFFVAIIVIFL*
Ga0075157_1025045023300005961Wastewater EffluentFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLVF*
Ga0075158_1002042313300005987Wastewater EffluentMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLIF*
Ga0075160_1001094443300005988Wastewater EffluentMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLVF*
Ga0075160_1009664553300005988Wastewater EffluentFVFAPLTGCAIATGLVFASLIKGISYSPDLEEVLFNYTALGFAFIESFAFILIFATILIMVQ*
Ga0075154_1025957913300005989Wastewater EffluentTGCAIATGLVFASLIKGISYSPDLEEVLFNYTALGFAFIESFAFILIFATILIMVQ*
Ga0075154_1059850513300005989Wastewater EffluentGCAVATGLIFASLIKGIAYAPDLEETLFNYTTLGFAFVESFAFLLFFVAIGVLVI*
Ga0075163_1003240043300006056Wastewater EffluentVLFIKASKVLALSFVFAPLTGCAIATGLVFASLIKGISYSPDLEEVLFNYTALGFAFIESFAFILIFATILIMVQ*
Ga0007881_108783323300006072FreshwaterMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIAVLII*
Ga0075441_1029664213300006164MarineVFMPLTGCAIATGLIFASLLKSVSYAPDYEEVLFNYATLGFAFVESFSFLLFFVAGFIYIF*
Ga0075492_137768523300006394AqueousLSLVFMPLTGCAIATGLIFASLLKSISYAPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYVF*
Ga0075493_135675223300006396AqueousMPLTGCAIATGLIFASLLKSISYAPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYVF*
Ga0075179_140671513300007230Wastewater EffluentSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGTVMFM*
Ga0075183_1014495613300007232Wastewater EffluentSKVLALSFVFAPLTGCAIATGLVFASLIKGISYSPDLEEVLFNYTALGFAFIESFAFILIFATILIMVQ*
Ga0075178_164910213300007233Wastewater EffluentKVLALSFVFAPLTGCAIATGLVFASLIKGISYSPDLEEVLFNYTALGFAFIESFAFILIFATILIMVQ*
Ga0075178_171645313300007233Wastewater EffluentKVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLVF*
Ga0075177_100194113300007237Wastewater EffluentLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLIF*
Ga0075170_101631623300007241Wastewater EffluentASKVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLIF*
Ga0075167_1059509613300007244Wastewater EffluentVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGTVMFM*
Ga0101450_11435423300007266Marine Surface WaterVLXIATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFVAIAIFAM*
Ga0103741_104988213300008938Ice Edge, Mcmurdo Sound, AntarcticaKTSGKNYCKSGIRFVIALALVFLPLTGCAIATGLIFASLLKSMSYAPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYVL*
Ga0104258_102728623300008993Ocean WaterELALVFMPLTGCAIATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFVAIAIFAM*
Ga0104258_110928113300008993Ocean WaterLSITFLPLTGCAIGTGLIFASLLKSMSYAPDSEEMLFNYAALGFAFVESFSFLLFFMVGIIYVM*
Ga0114963_1051020023300009154Freshwater LakeMGCAVATGLIFASLIKGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL*
Ga0103862_106616913300009249River WaterLKIKPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIAVMII*
Ga0114994_1090505513300009420MarineIALVFMPVTGIAIATGLIFASLLKSISYAPDYEDVLFNYAVLGFAFVESFLFILAIIAGGLFVI*
Ga0115005_1009316423300009432MarineMLALAIVFLPITGCAIATGLIFASLIYSISLAPFEEELLFNYATLGFAFVESFSFILLFVAAFIYLA*
Ga0115008_1075619823300009436MarineALGIVFFPITGCAIATGIIFASLLKSVSYAPDYEEVLFNYAILGFAFVETFCFFLFFAAGFIYVL*
Ga0115006_1070695713300009544MarineGIVFFPITGCAIATGIIFASLLKSVSYAPDYEEVLFNYAILGFAFVETFCFFLFFAAGFIYVL*
Ga0115101_177215513300009592MarineAIATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFAAGFIYVL*
Ga0115101_185655213300009592MarineSSKMLALSIVFLPITGCAIATGLIFASLIYSISLAPYEEELLFNYAALGFAFVESFSFILFFAAAFIYFA*
Ga0115103_101966413300009599MarineAKVIALSLVFMPLAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYIL*
Ga0115103_158848653300009599MarineMLFVKSSKMLALSIVFLPITGCAIATGLIFASLIYSISLAPYEEELLFNYAALGFAFVESFSFILFFAAAFIYFA*
Ga0115103_172949413300009599MarineAAKVLALSLVFMPLTGCAIATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFAAAFIYVL*
Ga0115103_179459413300009599MarineAAKVIALSLVFMPLAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYIL*
Ga0115102_1038698613300009606MarineAAKVIALSLVFMPLAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFAFLLFFVAGFIYVL*
Ga0115100_1068937733300009608MarineKVIALSLVFMPLAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYIL*
Ga0115100_1077742813300009608MarineAKVIALSLVFMPFAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFAFLLFFVAGFIYVL*
Ga0115100_1087801223300009608MarineMPFAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFAFLLFFVAGFIYVL*
Ga0115104_1020586023300009677MarineSITFLPLTGCAIGTGLIFASLLKSMSYAPDSEEMLFNYAALGFAFVESFSFLLFFMVGIIFVM*
Ga0115104_1026841413300009677MarineAKVVALSLIFMPLTGCAIATGLIFASLLKSISYAPDFEETLFNYASLGFAFVESFAFILFGAAAIIYIF*
Ga0115104_1104211123300009677MarineALALVFLPLTGCAIATGLIFASLLKSMSYAPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYVL*
Ga0115105_1088073013300009679MarineVLALSLVFMPLTGCAIATGLIFASLLKSVSYAPDCEEILFNYATLGFAFVESFSFLLFGVAGFIYIL*
Ga0115105_1093758713300009679MarineAAKVIALSLVFMPLAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFSFLLFFVAGFVYIL*
Ga0127507_128837313300010200Host-AssociatedAKVLSLSFVFMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGAVMFS*
Ga0133913_1179422633300010885Freshwater LakeFVFMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL*
Ga0150985_11053188523300012212Avena Fatua RhizosphereMPLMGCAVATGLIFASLIRGISYSPDLEEVLFNYTALGFAFVESFAFLLFFVAGIVIFY*
Ga0150985_12029211323300012212Avena Fatua RhizosphereMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVIFL*
Ga0150985_12282218213300012212Avena Fatua RhizosphereALPISLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVIFL*
Ga0150985_12282392713300012212Avena Fatua RhizosphereRRVLFRSVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVIFL*
Ga0138265_134216333300012408Polar MarineMPLTGCAIATGLIFASLLKSVSYAPDYEEVLFNYATLGFAFVESFSFLLFFVAGFIYIF*
Ga0138258_129724113300012413Polar MarineKAAKVIALSIVVLPLAGCAVATGIIFSALIKGLSYSPDLEEILFNYTTLGFAFVESFAFLLFGIAAIIYIF*
Ga0138264_105766513300012414Polar MarineSLVFMPLTGCAIATGLIFASLLKSVSYAPDYEEVLFNYATLGFAFVESFSFLLFFVAGFIYIF*
Ga0138264_141602213300012414Polar MarineAAKVIALSIVVLPLAGCAVATGIIFSALIKGLSYSPDLEEILFNYTTLGFAFVESFAFLLFGIAAIIYIF*
Ga0138263_131832523300012415Polar MarineLSIVVLPLAGCAVATGIIFSALIKGLSYSPDLEEILFNYTTLGFAFVESFAFLLFGIAAIIYIF*
Ga0138259_158822613300012416Polar MarineKVIALSIVVLPLAGCAVATGIIFSALIKGLSYSPDLEEILFNYTTLGFAFVESFAFLLFGIAAIIYIF*
Ga0138262_140096813300012417Polar MarineALSIVVLPLAGCAVATGIIFSALIKGLSYSPDLEEILFNYTTLGFAFVESFAFLLFGIAAIIYIF*
Ga0138262_165520813300012417Polar MarineAKVIALSIVVLPLAGCAVATGIIFSALIKGLSYSPDLEEILFNYTTLGFAFVESFAFLLFGIAAIIYIF*
Ga0138261_145800423300012418Polar MarineKMLAIAVVFLPLTGCAIATGLIFALIYSISLAPFEEELLFNYAALGFAFVESFTFILLFVAVFIHLA*
Ga0150984_11147686723300012469Avena Fatua RhizosphereLSLSFVFMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGVVVFL*
Ga0157623_118486413300012707FreshwaterMLLMGCAVATGLIFASLIRGISYVLDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL*
Ga0157625_106249413300012729FreshwaterMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVIFI*
Ga0157602_129956113300012730FreshwaterVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL*
Ga0157616_132627123300012731FreshwaterMGVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVIFI*
Ga0138289_121332923300012763Freshwater LakeKVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL*
Ga0138274_113695723300012765Freshwater LakeLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVIFL*
Ga0138282_105415613300012766Freshwater LakeVLSLSFVFMPLMGCAVATGLIFASLFKGISYASDFEEVLFNYTTLGFAFVESFAFLLFFVAIVVVFL*
Ga0163111_1151073213300012954Surface SeawaterMLFVKSAKVLALAIVFLPLTGCALATGLIFASLVRGLSYSPEMEETMFNYTALGFAFVESFSFLLF
Ga0181465_11403413300013870Clean RoomGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIIVIFL*
Ga0157377_1065387013300014745Miscanthus RhizosphereMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFF
Ga0163144_10031445103300015360Freshwater Microbial MatMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVMFM*
Ga0182085_122640023300016723Salt MarshSLVFMPLAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYIL
Ga0182094_101822123300016731Salt MarshMTQADAFFAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYI
Ga0182092_106392613300016734Salt MarshAAKVIALSLVFMPLTGCAIATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFAAGFIYVL
Ga0182097_116836623300019261Salt MarshGCAIATGLIFASLLKSMSYAPDYEDTLFNYAALGFAFVESFSFLLFFVAGFIYVS
Ga0206356_1024152913300020070Corn, Switchgrass And Miscanthus RhizosphereMPLMGCAVATGLIFASLIKGISYAPDLEETLFNYTTLGFAFVESFAFLLFFVAGIVIFL
Ga0206351_1022269913300020077Corn, Switchgrass And Miscanthus RhizosphereKVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEETLFNYTTLGFAFVESFAFLLFFVAGIVIFL
Ga0206354_1054657713300020081Corn, Switchgrass And Miscanthus RhizosphereSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEETLFNYTTLGFAFVESFAFLLFFVAGIVIFL
Ga0194115_1017454413300020183Freshwater LakeMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL
Ga0194118_1004042323300020190Freshwater LakeMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIAVLVI
Ga0194124_1024547123300020196Freshwater LakeTGCAIATGLIFSALVKGISYSPEQEEVLFNYSTIGFAFVETFAFMLIAIIGLIYTF
Ga0211731_1155342123300020205FreshwaterMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVIFL
Ga0194127_1012586623300020221Freshwater LakeMGCAVATGLVFSALIKGISYAPEQEDVLFNYSILGFAFIESFAFMLFAVAGIVYAF
Ga0208856_103863113300020548FreshwaterCAVATGLIFGALLRSISYSPDQEEILFAYGALGFAFVETFALILFAIAGLIIFL
Ga0214192_101506823300021142FreshwaterMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIAVLII
Ga0206692_163970413300021350SeawaterAKVIALSLVFMPLAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYIL
Ga0206690_1092135113300021355SeawaterAKAVALSLVFMPLTGCAIATGIIFASLLKSVSYSPDYEEVLFNYAIIGFAFVESFSFMLFFAAGFIYVS
Ga0206689_1106127513300021359SeawaterAKVIALALVFMPLTGCAIATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFAAGFIYVL
Ga0210389_1013283623300021404SoilMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVVFL
Ga0210389_1071101513300021404SoilMGIIFLPLTGCAIATGLVFAALVRGLSYAPDLEETLFNFTALGFAFIESFSF
Ga0213849_107726413300021857WatershedsASKVLSLSFVFMPLMGCAVATGLIFASLIRGVSYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVVIF
Ga0213849_114121113300021857WatershedsASKVLSLSFVFMPLMGCAVATGLIFASLIRGVSYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVIIF
Ga0222624_102253423300021951Groundwater SedimentVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVIFL
Ga0222624_158639413300021951Groundwater SedimentKVMSLSFVFLPLMGCAVATGLIFASLVRGVSYAPDLEEVLFNYTALGFAFVESFAFLLFFVAGAVLIL
Ga0224712_1043508423300022467Corn, Switchgrass And Miscanthus RhizosphereVLSLSFVFMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAAAVMFS
Ga0242663_113444313300022523SoilMGCAIATGLVFASLIRGVSYSPDLEEVLFNYTTLGFAFIESFSFLLFFV
Ga0222648_106507013300023054Saline WaterGTGIIFAALIRGLAYAPDLEETLFNYTTLGFAFVESFAFLLFGVAAIIYIF
Ga0255280_102123213300024555FreshwaterMIATGLIFASLIKGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAGIVLFI
Ga0255236_101268223300024563FreshwaterVLFIKASKVLALSFVFAPLTGCAIATGLVFASLIKGISYSPDLEEVLFNYTALGFAFIESFAFILIFATILIMVQ
Ga0255275_121491213300024574FreshwaterLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVMFM
Ga0209594_102183413300025130GroundwaterMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGIVIFL
Ga0208503_102875513300025388FreshwaterSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIAVLII
Ga0247591_110654013300026434SeawaterMIHLHLRLLKTVAIGMVLFPITGCAIGTGIIFASLLKSVSYAPDYEEVLFNYAIIGFAFIETFCFFLFGGVGFIYAM
Ga0247568_108678823300026462SeawaterAQPAKGINTKVIALSLVFMPFAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFAFLLFFVAGFIYVL
Ga0255289_111693713300026571FreshwaterVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL
Ga0208798_103421413300027183EstuarineATGVIFSSLIKAISYAPDLEETLFNYASLGFALVETFAFMLFFVAGFIFAI
Ga0209710_127648323300027687MarineSLVFMPLTGCAIATGLIFASLLKSVSYAPDYEEVLFNYATLGFAFVESFSFLLFFVAGFIYIL
Ga0209617_1019171623300027720Freshwater And SedimentMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTALGFAFVESFAFLLFF
Ga0209598_1020455923300027760Freshwater LakeMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL
Ga0209770_1039794123300027769Freshwater LakeKVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTALGFAFVESFAFLLFFVAGIVIFL
Ga0209709_1030101523300027779MarinePITGCAIATGIIFASLLKSVSYAPDYEEVLFNYAILGFAFVETFSFILFFAAAFIYVL
Ga0209175_1000214933300027781Wastewater EffluentMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLIF
Ga0209175_1000611243300027781Wastewater EffluentMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLVF
Ga0209175_1029039313300027781Wastewater EffluentFVFAPLTGCAIATGLVFASLIKGISYSPDLEEVLFNYTALGFAFIESFAFILIFATILIMVQ
Ga0209812_1039114813300027786Wastewater EffluentGCAVATGLIFASLIKGIAYAPDLEETLFNYTTLGFAFVESFAFLLFFVAIGVLVI
Ga0209358_1036769923300027804Freshwater LakeVLSLSFVFMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIFL
Ga0209712_1055793023300027849MarineMLALAIVFLPITGCAIATGLIFASLIYSISLAPFEEELLFNYATLGFAFVESFSFILLFVAAFIYLA
Ga0209713_1061260323300027883MarineCAIATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFVAIAIFAM
Ga0247563_107749423300028095SeawaterMPFAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFAFLLFFVAGFIYVL
Ga0247584_110479123300028110SeawaterPLTGCAIGTGLIFASLLKSMSYAPDSEEMLFNYAALGFAFVESFSFLLFFMVGIIYVM
Ga0247584_116901613300028110SeawaterVIALALVFLPLTGCAIATGLIFASLLKSMSYAPDYEEVLFNYAALGFAFVESFSFLLFFVAGFIYVL
Ga0256412_111382213300028137SeawaterIVFLPIAGCAIGTGIIFASLLKSVSYAPDYEEVLFNYAIIGFAFIETFSFFLFGAAGFIYVL
Ga0256412_112950513300028137SeawaterMLFVKAAKVVALSLVFMPLTGCAIATGLIFASLLKSMSYAPDYEEVLFNYAALGFAFVESFSFLLFFAAGFIYVL
Ga0256413_103672033300028282SeawaterCFFPITGCAIGTGIIFASLLKSVSYAPDYEEVLFNYAIIGFAFIETFCFFLFFGVGFIYA
Ga0256331_116417823300028286FreshwaterVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAIVIF
Ga0247572_112894923300028290SeawaterMPLTGCAIATGLIFASLLKSVSYAPDYEEVLFNYATLGFAFVESFSFLLFFVAGFIYIL
Ga0247595_102805113300028333SeawaterVVILLIRIFEILQLLFIKAAKVIALSLVFMPFAGCAVATGLIFSSLLRSISYSPDYEEVLFNYAALGFAFVESFAFLLFFVAGFIYVL
Ga0247566_104946223300028335SeawaterKSSKMLALSIVFLPITGCAIATGLIFASLIYSISLAPYEEELLFNYAALGFAFVESFSFILFFAAAFIYFA
Ga0247566_105127913300028335SeawaterVLFVKAAKVVALSLIFMPLTGCAIATGLIFASLLKSISYAPDFEETLFNYAGLGFAFVESFAFILFGAAGLIYVF
(restricted) Ga0247832_102167843300028557FreshwaterMPLMGCAVATGLIFASLIKSISYAPDLEEILFNYTVLGFAFVESFAFLLFFVAGVVIFL
Ga0302209_1007257913300028772FenMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIIVIFL
Ga0302200_1017710413300028909BogMPLMGCAVATGLIFASLIKGISYAPDLEEILFNYTTLGFAFVESFAFLLFFVAGVVVFL
Ga0311341_1009108013300029908BogMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAAAVMFS
Ga0311360_10000461203300030339BogMPLMGCAVATGLIFASLIKGISYAPDLEETLFNYTTLGFAFVESFAFLLFFVAAGVLFI
Ga0247645_113000113300030553SoilSFVFMPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAAAVMFS
Ga0247630_106997313300030599SoilVLSLSFVFMPLMGCAVATGLIFASLIRGISYSPDLEEVLFNYTALGFAFVESFAFLLFFVAGIVIFY
Ga0307403_1060890713300030671MarineVVALSLVFMPLTGCAIATGLIFASLLKSVSYAPDYEEVLFNYATLGFAFVESFSFLLFFVAGFIYIF
Ga0315855_11959013300030864Plant LitterKAFKVLALSFVFMPLMGCAVATGLIFASLIKGISYAPDMEETLFNYTALGFAFVESFAFLLFFVAIAVFTM
Ga0102765_1158313013300031021SoilLSLSFVFMPLMGCAVATGLIFASLIRGISYSPDLEEVLFNYTALGFAFVESFAFLLFFVAGIVIFY
Ga0074012_1003036713300031029SoilPLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAAIVIFL
Ga0170818_11266469413300031474Forest SoilLMGCAVATGLIFASLIRGISYAPDLEEVLFNYTALGFAFVESFAFLLFFVAAAVMFM
Ga0307996_103404713300031589MarineMLFVKSAKMLALSIVFLPITGCAISTGCIFASLIYSISLAPVEEELLFNYAALGFAFTESFSFILMGVAAFIYLA
Ga0302114_1026154913300031621MarineATGLIFASLLKSMSYAPDYEETLFNYAALGFAFVESFSFLLFFVAIAIFAM
Ga0315899_1003632943300031784FreshwaterMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAIAVMII


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.