Metagenome Family F042428

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042428
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	103 residues
Representative Sequence	YANLVAARPDDARLRLSYGEALLGNAQFAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIAWLTTIPTRFLPPDVQTDAVFAPLRTREDFRALFSSR
Number of Associated Samples	134
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.47 %
% of genes near scaffold ends (potentially truncated)	82.91 %
% of genes from short scaffolds (< 2000 bps)	79.11 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.85

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.823 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (13.291 % of family members)
Environment Ontology (ENVO)	Unclassified (38.608 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.861 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.44% β-sheet: 0.00% Coil/Unstructured: 46.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.85
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.85
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains	d4cr2p1	4cr2	0.71705
a.118.8.1: Tetratricopeptide repeat (TPR)	d1w3ba_	1w3b	0.71449
a.118.8.1: Tetratricopeptide repeat (TPR)	d1fcha_	1fch	0.71381
a.118.8.0: automated matches	d3rkva_	3rkv	0.70969
a.118.8.1: Tetratricopeptide repeat (TPR)	d3o48a1	3o48	0.69333

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF01804	Penicil_amidase	9.49
PF08592	Anthrone_oxy	3.16
PF02638	GHL10	2.53
PF00561	Abhydrolase_1	1.90
PF13432	TPR_16	1.27
PF12587	DUF3761	1.27
PF01988	VIT1	1.27
PF07690	MFS_1	1.27
PF00589	Phage_integrase	0.63
PF12833	HTH_18	0.63
PF00005	ABC_tran	0.63
PF03486	HI0933_like	0.63
PF01011	PQQ	0.63
PF13520	AA_permease_2	0.63
PF00753	Lactamase_B	0.63
PF13505	OMP_b-brl	0.63
PF02597	ThiS	0.63
PF13924	Lipocalin_5	0.63
PF14559	TPR_19	0.63
PF13466	STAS_2	0.63
PF13570	PQQ_3	0.63
PF02633	Creatininase	0.63
PF01019	G_glu_transpept	0.63
PF02775	TPP_enzyme_C	0.63
PF01975	SurE	0.63
PF01569	PAP2	0.63
PF00583	Acetyltransf_1	0.63
PF00072	Response_reg	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	9.49
COG1649	Uncharacterized lipoprotein YddW, UPF0748 family	Function unknown [S]	2.53
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.27
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.27
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	1.27
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	1.27
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.63
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	0.63
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	0.63
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.63
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	0.63
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.63
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.63
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	0.63
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.63
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	0.63
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.63
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	0.63
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	0.63
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.82 %
Unclassified	root	N/A	34.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.82 %
Unclassified	root	N/A	34.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.82 %
Unclassified	root	N/A	34.18 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.44 %
Unclassified	root	N/A	34.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.90 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	28.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.90 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.27 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.63 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.22 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.90 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1.27 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.63 %
candidate division KSB1	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1	0.63 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.63 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.63 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.22 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.90 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1.27 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.63 %
Usitatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae	0.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.63 %
unclassified candidate division KSB1	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1	0.63 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.22 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.90 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1.27 %
Usitatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	0.63 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.63 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.63 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.22 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1.27 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.63 %
Usitatibacter rugosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	0.63 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.63 %
Pseudomonas alcaliphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas alcaliphila	0.63 %
Pseudomonas stutzeri group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group	0.63 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.63 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.22 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1.27 %
Pseudomonas sp. EGD-AK9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. EGD-AK9	0.63 %
Dokdonia	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Dokdonia	0.63 %
Pseudomonas stutzeri subgroup	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup	0.63 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.63 %
Usitatibacter rugosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	0.63 %
Pseudomonas alcaliphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas alcaliphila	0.63 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.22 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1.27 %
unclassified Dokdonia	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Dokdonia → unclassified Dokdonia	0.63 %
Pseudomonas stutzeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	0.63 %
Pseudomonas sp. EGD-AK9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. EGD-AK9	0.63 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.63 %
Usitatibacter rugosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	0.63 %
Pseudomonas alcaliphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas alcaliphila	0.63 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.22 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1.27 %
Dokdonia sp. PRO95	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Dokdonia → unclassified Dokdonia → Dokdonia sp. PRO95	0.63 %
Pseudomonas stutzeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	0.63 %
Pseudomonas sp. EGD-AK9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. EGD-AK9	0.63 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.63 %
Usitatibacter rugosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	0.63 %
Pseudomonas alcaliphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas alcaliphila	0.63 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.63 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2357820	All Organisms → cellular organisms → Bacteria	2154	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13910442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300000956\|JGI10216J12902_103878296	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300002128\|JGI24036J26619_10074048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300004052\|Ga0055490_10078374	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300004480\|Ga0062592_101245608	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300004643\|Ga0062591_101305092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas alcaliphila	714	Open in IMG/M
3300005093\|Ga0062594_102918137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005293\|Ga0065715_10646177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300005294\|Ga0065705_10582947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300005295\|Ga0065707_10238971	Not Available	1162	Open in IMG/M
3300005295\|Ga0065707_10557802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300005327\|Ga0070658_11040909	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005337\|Ga0070682_100735360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300005337\|Ga0070682_101695593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	549	Open in IMG/M
3300005339\|Ga0070660_100270950	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300005339\|Ga0070660_101284639	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005344\|Ga0070661_101894594	Not Available	507	Open in IMG/M
3300005353\|Ga0070669_101510668	Not Available	584	Open in IMG/M
3300005354\|Ga0070675_100087167	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300005355\|Ga0070671_101720740	Not Available	557	Open in IMG/M
3300005356\|Ga0070674_102235418	Not Available	500	Open in IMG/M
3300005366\|Ga0070659_101766630	Not Available	554	Open in IMG/M
3300005434\|Ga0070709_10510253	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300005440\|Ga0070705_101393864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005444\|Ga0070694_100065242	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300005445\|Ga0070708_101550250	Not Available	617	Open in IMG/M
3300005471\|Ga0070698_101506152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. EGD-AK9	624	Open in IMG/M
3300005530\|Ga0070679_101678283	Not Available	583	Open in IMG/M
3300005535\|Ga0070684_100444750	All Organisms → cellular organisms → Bacteria → Proteobacteria	1197	Open in IMG/M
3300005535\|Ga0070684_102310144	Not Available	507	Open in IMG/M
3300005546\|Ga0070696_101403380	Not Available	596	Open in IMG/M
3300005548\|Ga0070665_101500326	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005578\|Ga0068854_100089011	All Organisms → cellular organisms → Bacteria	2293	Open in IMG/M
3300005617\|Ga0068859_102336226	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005719\|Ga0068861_100898844	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005719\|Ga0068861_101009361	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005844\|Ga0068862_102113253	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Dokdonia → unclassified Dokdonia → Dokdonia sp. PRO95	574	Open in IMG/M
3300005888\|Ga0075289_1093508	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006042\|Ga0075368_10253169	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300006058\|Ga0075432_10546354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300006178\|Ga0075367_10574750	Not Available	716	Open in IMG/M
3300006196\|Ga0075422_10394418	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300006845\|Ga0075421_100013706	All Organisms → cellular organisms → Bacteria	10109	Open in IMG/M
3300006845\|Ga0075421_100209018	All Organisms → cellular organisms → Bacteria	2411	Open in IMG/M
3300006846\|Ga0075430_101785993	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300006847\|Ga0075431_101070596	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	772	Open in IMG/M
3300006853\|Ga0075420_100090494	All Organisms → cellular organisms → Bacteria	2703	Open in IMG/M
3300006871\|Ga0075434_100916491	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300006894\|Ga0079215_11233962	Not Available	572	Open in IMG/M
3300006954\|Ga0079219_11412866	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300009094\|Ga0111539_13473965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300009098\|Ga0105245_10579138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300009131\|Ga0115027_11589670	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300009840\|Ga0126313_11691255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300010044\|Ga0126310_11738893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300010166\|Ga0126306_11355113	Not Available	588	Open in IMG/M
3300010373\|Ga0134128_12039343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300010373\|Ga0134128_13041633	Not Available	516	Open in IMG/M
3300010398\|Ga0126383_11969978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300010400\|Ga0134122_13156432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300010400\|Ga0134122_13380971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300010401\|Ga0134121_12399071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300010403\|Ga0134123_10628654	Not Available	1037	Open in IMG/M
3300010403\|Ga0134123_10830705	Not Available	921	Open in IMG/M
3300011119\|Ga0105246_10711107	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300011430\|Ga0137423_1202072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012469\|Ga0150984_107512681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012469\|Ga0150984_120759915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300012508\|Ga0157315_1062885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300012927\|Ga0137416_11458535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300012985\|Ga0164308_10115962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1916	Open in IMG/M
3300013100\|Ga0157373_11046103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300014270\|Ga0075325_1187133	Not Available	545	Open in IMG/M
3300014325\|Ga0163163_12775335	Not Available	546	Open in IMG/M
3300014326\|Ga0157380_12142772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300014326\|Ga0157380_12760602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300015371\|Ga0132258_13312635	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300015372\|Ga0132256_100422229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1437	Open in IMG/M
3300015373\|Ga0132257_104318691	Not Available	517	Open in IMG/M
3300015374\|Ga0132255_101148783	All Organisms → cellular organisms → Bacteria → Acidobacteria	1168	Open in IMG/M
3300015374\|Ga0132255_103398522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	678	Open in IMG/M
3300017965\|Ga0190266_11061136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	548	Open in IMG/M
3300018084\|Ga0184629_10241091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300018422\|Ga0190265_10613801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300018422\|Ga0190265_11739335	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300018422\|Ga0190265_12515522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	613	Open in IMG/M
3300018469\|Ga0190270_13367440	Not Available	507	Open in IMG/M
3300018476\|Ga0190274_12689219	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300018481\|Ga0190271_13316065	Not Available	540	Open in IMG/M
3300019356\|Ga0173481_10869476	Not Available	505	Open in IMG/M
3300020004\|Ga0193755_1093296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300020005\|Ga0193697_1003836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3774	Open in IMG/M
3300025160\|Ga0209109_10184101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1037	Open in IMG/M
3300025907\|Ga0207645_10988206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300025908\|Ga0207643_10798758	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300025909\|Ga0207705_11496108	Not Available	511	Open in IMG/M
3300025919\|Ga0207657_10298405	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300025923\|Ga0207681_11134134	Not Available	657	Open in IMG/M
3300025923\|Ga0207681_11489250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300025935\|Ga0207709_11002452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300025936\|Ga0207670_10994340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300025944\|Ga0207661_12119749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300025945\|Ga0207679_11659408	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300026041\|Ga0207639_11403024	Not Available	656	Open in IMG/M
3300026089\|Ga0207648_11294425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300026118\|Ga0207675_100880635	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300026121\|Ga0207683_10638048	Not Available	986	Open in IMG/M
3300026142\|Ga0207698_10892988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300026807\|Ga0207547_107043	Not Available	517	Open in IMG/M
3300027866\|Ga0209813_10190027	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300028379\|Ga0268266_10379209	All Organisms → cellular organisms → Bacteria → Acidobacteria	1333	Open in IMG/M
3300028587\|Ga0247828_10656372	Not Available	647	Open in IMG/M
3300028809\|Ga0247824_10002934	All Organisms → cellular organisms → Bacteria → Acidobacteria	9589	Open in IMG/M
3300031547\|Ga0310887_10894317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300031562\|Ga0310886_10503386	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031562\|Ga0310886_10743331	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031847\|Ga0310907_10391598	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031854\|Ga0310904_11362523	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031858\|Ga0310892_10108159	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300031890\|Ga0306925_10637320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300031901\|Ga0307406_10299491	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300031943\|Ga0310885_10755783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031996\|Ga0308176_10945560	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300032002\|Ga0307416_100068066	All Organisms → cellular organisms → Bacteria	2940	Open in IMG/M
3300032003\|Ga0310897_10475996	Not Available	602	Open in IMG/M
3300032003\|Ga0310897_10622895	Not Available	535	Open in IMG/M
3300032005\|Ga0307411_10538359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300032012\|Ga0310902_10795392	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300032075\|Ga0310890_10296652	Not Available	1160	Open in IMG/M
3300032075\|Ga0310890_11094031	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300032179\|Ga0310889_10027480	Not Available	2054	Open in IMG/M
3300032211\|Ga0310896_10058569	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300033412\|Ga0310810_11058086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300034148\|Ga0364927_0128082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	720	Open in IMG/M
3300034149\|Ga0364929_0338413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.43%
Host-Associated	Host-Associated	44.94%
Engineered	Engineered	0.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.27%
Plants	Host-Associated → Plants	44.94%
Aquatic	Environmental → Aquatic	3.16%
Solid Waste	Engineered → Solid Waste	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.82%
Roots	Host-Associated → Plants → Roots	2.53%
Sediment	Environmental → Aquatic → Sediment	1.90%
Floodplain	Environmental → Terrestrial → Floodplain	1.27%
Freshwater	Environmental → Aquatic → Freshwater	0.63%
Marine	Environmental → Aquatic → Marine	0.63%
Grass	Engineered → Solid Waste → Grass	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.39%
Loam	Environmental → Terrestrial → Soil → Loam	8.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.63%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.63%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%
Composting	Engineered → Solid Waste → Grass → Composting	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.63%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.06%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.27%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.27%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.63%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.63%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.63%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026807	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_02718080	2170459016	Switchgrass, Maize And Mischanthus Litter	HNGLTEATAAGQIVMGDFHAAVTTYAELVARDSADPRLRLSYGEALLGDRQFAAACAEFEKLKGTGLGYRDLGLPAARACMQKGDVDAAIAWLKSIPKRFLPTSVQNEPVFASLRERAEFKALFQVP
ICChiseqgaiiDRAFT_23578204	3300000033	Soil	DDPRLRLAYGEALLGDRQFAKACGEFETLKGKGLGPRDLGLPAARACLNAGDPELAMSWLRSIPKRFLPPRVREDPAFAALWDRADFKALFETDPH*
ICChiseqgaiiFebDRAFT_139104422	3300000363	Soil	ELVAARPDDARLRLAYGEALLGDAQYATACAEFEKVKGKGLGPRDLGLPAARACLQKGDPDAAIAWLRTIPQRFLPASVEKDAVFAPLQSRDDFRALFKGK*
JGI10216J12902_1038782961	3300000956	Soil	AELVSARPNDSRLRLSYGEALLGAGQYAVACAEFEKLKGKGLGPRDLGLPAARACMQKGDAEAAIGWLKSIPTRFLPPQVQNETVFAPLRSREDFKALFPAR*
JGI24036J26619_100740481	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	RLAYGEALLGDGQAAAACSEFDKLRDKGLGYRDLGLPAARACLQKGDPEAAIAWLRTIPSRFLPPSIGQDPAFAALRNRPDFLALFERR*
Ga0055490_100783742	3300004052	Natural And Restored Wetlands	AGYMATGRTSAAADAYGRLVAARPDDPRLGLAWGEALLADERYEAACRQFGRLRGKPLGPRDLGLPAARACMLDGNADAAIEWLRSIPSRFLPSSVREEAVFEPLRDRADFRALFGNG*
Ga0062592_1012456081	3300004480	Soil	KSPDNAPLRLSYGEALLATGQFAAACGEFEKLKGKGLGPRDLGLPAASACLQNGEPETAMAWLKSIPSRFLPMRVKDDPAFAALKDRPDFQALFSR*
Ga0062591_1013050921	3300004643	Soil	PSYQAALRKGLPEASAAAAVSSGNFKQAASIYQEMLGRTPDDARLRLSFGEALLGDGQFAAACGEFEKLKGKGLGYRDLGIPAARACMQKGDGDAAIAWIASIPVRFRPMDLEKDPIFAPVQNRAEFKALFAR*
Ga0062594_1029181372	3300005093	Soil	AYAELVKAKPGDPRVRLSYGEALLGASQFAAACAELEKLKGQGLGPRDLGLPAARACVQSGNHEAAIAWLKSIPSRFLPGDVEREPVFAPLQNRPDFKALFAPAR*
Ga0065715_106461772	3300005293	Miscanthus Rhizosphere	YAELVKAKPGDPRVRLSYGEALLGASQFAAACAELEKLKGQGLGPRDLGLPAARACVQSGNHEAAIAWLKSIPSRFLPGDVEREPVFAPLQNRPDFKALFAPAR*
Ga0065705_105829471	3300005294	Switchgrass Rhizosphere	RPEDARLRLAYGEALLGDGQAAAACSEFDKLRDKGLGYRDLGLPAARACLQKGDPEAAIAWLRTIPSRFLPPSIGQDPAFAALRNRPDFLALFERR*
Ga0065707_102389711	3300005295	Switchgrass Rhizosphere	LRLSYGEALLGASRFAEACDELEKLRGKGLGPRDLGIPAAHACMQKGDADTAIGWLRSIPKRFRSSELQQDPIFAPIRTRPEFVALF*
Ga0065707_105578021	3300005295	Switchgrass Rhizosphere	AATYSSMVAARPEDARLRLAYGEALLGDGQAAAACSEFDKLRDKGLGYRDLGLPAARACLQKGDPEAAIAWLRTIPSRFLPPSIGQDPAFAALRNRPDFLALFERR*
Ga0070658_110409092	3300005327	Corn Rhizosphere	VPIYADLVAARPDDARLRLSYGEALLGNAQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIAWLTTIPTRFLPPDVQTDAVFAPLRTREDFRALFSSR*
Ga0070682_1007353601	3300005337	Corn Rhizosphere	YASMVAARPDDARLRLAYGEALLGDTQYAAACAEFDRLRDKGLGYRDLGLPAARACLGKGDPQAAVAWLRTIPPQFLPSSVQQDPSFAALKDREDFKALFTRR*
Ga0070682_1016955931	3300005337	Corn Rhizosphere	VPEATAAGHVQVRDFGKAVPIYANLVAARPDDARLRLSYGEALLGNAQFAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAMSWLKTIPTRFLPPDVQNDTVFAPLKTREDFRALFSSR*
Ga0070660_1002709502	3300005339	Corn Rhizosphere	AVPIYADLVAARPDDARLRLSYGEALLGNAQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIAWLTTIPTRFLPPDVQTDAVFAPLRTREDFRALFSSR*
Ga0070660_1012846391	3300005339	Corn Rhizosphere	QVRDFAKAVPIYADLVAARPDDTRLRLSYGEALLGNSQYAAACGELEKLKGKGLGPRDLGLPAARACMLKGDSDAAIAWLKTIPSRFLPPDVRDEAVFAPLKSREDFRALFPAR*
Ga0070661_1018945941	3300005344	Corn Rhizosphere	RLRLAYGEALLGDKQYVEACSQFDRLRGKGLGARDLGIPAARACLLKGDSSAAVGWLQSIPKRFLPASLQEDSLFAGLKSRAHFRQLFVP*
Ga0070669_1015106681	3300005353	Switchgrass Rhizosphere	SYGEALIGDKQYAVACAEFEKLKGKPLGPRDLGLPAARACAQMGDLDKAVAWLKSIPKRFLPPQVQSDPAFAAMQNRDDFRALFQAP*
Ga0070675_1000871672	3300005354	Miscanthus Rhizosphere	AARPDDARLRLSYGEALLGNTQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIGWLKTIPTRFLPPDVQNEAVFAPLKSREDFRALFPAR*
Ga0070671_1017207402	3300005355	Switchgrass Rhizosphere	SYGEALIGDKQYAVACAEFEKLKGKPLGPRDLGLPAARACAQMGDLDKAVAWLKSIPKRFLPPQVQSDPAFAAMQSRDDFRALFQAP*
Ga0070674_1022354182	3300005356	Miscanthus Rhizosphere	ARLRLSYGEALLGASKFAEACAELDKLKGKGLGPRDLGLPAARACLQKGDADAAIGWLKSIPQRYLPRDIEKDPAFAPLREREDFKALFRTGG*
Ga0070688_1003733821	3300005365	Switchgrass Rhizosphere	TAPAYLAALRHGLPEATAAGQVVAGDYHAAVVAYAQVVAARPDDPRLRLSYGEALIGDKQYAVACAEFEKLKGKPLGPRDLGLPAARACAQMGDLDKAVAWLKSIPKRFLPPQVQSDPAFAAMQNRDDFRALFQAP*
Ga0070659_1017666302	3300005366	Corn Rhizosphere	KQYAPLVAARPDDARLHLAYGEALLGDRQYATACAELEKLKDKGLGYRDLGLPAARACMLKGDGDAAIAWLRSIPQRFLPSDIETDPVFEPLRSREEFRALFKR*
Ga0070709_105102531	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	HPDDARLRLSYGEALLGDARYAAACAEFEKLRGKGLGPRDLGLPAAEACVKSGDPETAVAWLRTIPPQFRPATIQDDPAFAALRSRPDFRALFVK*
Ga0070705_1013938642	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LSYGEALLGASQFAAACAELEKLKGQGLGPRDLGLPAARACVQSGNHEAAIAWLKSIPSRFLPGDVEREPVFAPLQNRPDFKALFAPAR*
Ga0070694_1000652424	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LAYGEALLGDTQYAAACAEFDRLRDKGLGYRDLGLPAARACLGKGDPQAAVAWLRTIPPQFLPSSVQQDPSFAALKDREDFKALFTRR*
Ga0070708_1015502501	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	EYAEVLASRPDDIRLRLSYGEALLGDKQYATACGEFDRLKGKGLGPRDLGLPAARACLLKGDSTAAVAWLQSIPKRFLSADIQQDSAFAALRGRADFRALFQP*
Ga0070698_1015061521	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EVYGQLVSMHPDDARLRLSYGEALLGDTQYATACGEFEKLKGKGLGYRDLGLPAARACMLKGDSDAAVAWLKSIPTRFLPPSVAAEAVFAPLQDRADFKALFPQR*
Ga0070679_1016782832	3300005530	Corn Rhizosphere	ETHPNDDRLRLSYGEALLGDKQYGAACAQFDRLRGKGLGARDLGLPAARACMLSGDAARAIAWLRSIPKRFLPASVAEEAVFASLQGNPEFRALFAP*
Ga0070684_1004447501	3300005535	Corn Rhizosphere	SAYASIVSSHPDDARLRLSYGEALLGDKQYSEACSQFDRLKGKGLGPRDLGIPAARACLLKGDSSAAIGWLQSIPKRFLPTSLQDDSLFAGLKSRADFRQLFVP*
Ga0070684_1023101442	3300005535	Corn Rhizosphere	THPNDDRLRLSYGEALLGDKQYGAACAQFDRLRGKGLGARDLGLPAARACMLSGDAARAIAWLRSIPKRFLPASVAEEAVFASLQGNPEFRALFAP*
Ga0070696_1014033801	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TTYASMVAARPDDARLRLAYGEALLGDGQAGAACTEFDKLRDKGLGYRDLGLPAARACLQKGDADAAIAWLRSIPARYLPASTAEDPAFAALRDRPDFRALFERK*
Ga0070665_1015003262	3300005548	Switchgrass Rhizosphere	LVAARPDDARLRLSYGEALLGNTQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIGWLKTIPTRFLPPDVQNEAVFAPLKSREDFRALFPAR*
Ga0068857_1019977282	3300005577	Corn Rhizosphere	LRRGLPEATAAGQVVAGDYHAAVVAYAQVVAARPDDPRVRLSYGEALIGDKQFAVACAEFEKLKGKGLGYRDLGLPAARACAQKGDLDTAVAWLKSIPKRFLPPNVQSDPAFAALQNRDDFRALFQTP*
Ga0068854_1000890111	3300005578	Corn Rhizosphere	VPEATAAGHVQVRDFAKAVPIYADLVAARPDDARLRLSYGEALLGNTQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIGWLKTIPTRFLPPDVQNEAVFAPLKSREDFRALFPAR*
Ga0068852_1015620002	3300005616	Corn Rhizosphere	GLPEATAAGQVVAGDYHAAVVAYAQVVAARPDDPRLRLSYGEALIGDKQYAVACAEFEKLKGKPLGPRDLGLPAARACAQKGDLDTAVAWLKSIPKRFLPTQVQSDPAFAALQNRDDFRALFQAP*
Ga0068859_1023362262	3300005617	Switchgrass Rhizosphere	RDFAKAVPIYADLVAARPDDARLRLSYGEALLGNTEYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIGWLKTIPTRFLPPDVQNEAVFAPLKSREDFRALFPAR*
Ga0068861_1008988441	3300005719	Switchgrass Rhizosphere	SYGEALLGAAQFAAACSVFDQLRNRGLGPRDLGVPAARACMQKGDAEAAIAWIASIPTQYRPRAIEADPIFAPIRERAAFKALFEAGR*
Ga0068861_1010093611	3300005719	Switchgrass Rhizosphere	AAATYSSMVAARPEDARLRLAYGEALLGDGQAAAACTEFDKLRDKGLGYRDLGLPAARACLQKGDPEAAIAWLRTIPSRFLPPSIGQDPAFAALRNRPDFLALFERR*
Ga0068863_1021644642	3300005841	Switchgrass Rhizosphere	LLGASQFATACAEFERLKGKGLGPRDLGLPAARACMQKGDAEAAVAWLRSIPSRFLPRDVQAEPAFAPIRERADFKALFPAGPAR*
Ga0068862_1021132531	3300005844	Switchgrass Rhizosphere	AGIPEASAAGYMQTREFGKAATAYAPLVAQRPNDTRLRLSYGEALLGDSQFGAACGEFEKLKGKGLGPRDLGLPAARACMQKGDPDAAIAWLKSIPTRFLPPSVQDEAVFASLKGREDFKALFPAR*
Ga0075289_10935081	3300005888	Rice Paddy Soil	SVYATLVASRADDARLRMSYGEALLGAERYADACAEFEKLKGKGLGPRDLGLPAARACMQKGDPAAAIAWLRSIPTRFLPPNVADDPVFAAIKDRDEFRALFEGR*
Ga0075368_102531691	3300006042	Populus Endosphere	PRLRLSYGEALLGAAQFAAACSVFDQLRNRGLGPRDLGLPAARACMQKGDGEAAIAWIASIPPQYRPRAIEADPVFAPVRERADFKALFAAGR*
Ga0075432_105463541	3300006058	Populus Rhizosphere	RLRLAYGEALLGDGQAAAACAEFDKLRDKGLGYRDLGLPAARACLQKGDPDAAIAWLRSIPARFLPPSIGQDPAFAPLRDRADFRALFERR*
Ga0075367_105747502	3300006178	Populus Endosphere	DDPRLRLSYGEALLGAAQFAAACSVFDQLRNRGLGPRDLGLPAARACMQKGDGEAAIAWIASIPPQYRPRAIEADPVFAPVRERADFKALFAAGR*
Ga0075422_103944182	3300006196	Populus Rhizosphere	LVKGKPGDPRVRLSYGEALLGASQFAAACAELETLKGKGLGPRDLGLPAARACVQSGNHDAAIAWLKSIPSRFLPGDVEKDPVFAPLQNRLDFKALFVPAR*
Ga0075421_1000137061	3300006845	Populus Rhizosphere	GEALLGASQFAAACAELEQLKGKGLGPRDLGLPAARACVQSGNHDAAIAWLKSIPSRFLPGDVEKEPVFAPLQNRPDFKALFQPGR*
Ga0075421_1002090181	3300006845	Populus Rhizosphere	TEPRLRLSYGEALLGDSQFAAACTEFEKLKGKGLGPRDLGLPAARACMQKGDADTAIAWLKSIPTRFLPPSVQTEAVFAPVAGREDFKALFPAR*
Ga0075430_1017859931	3300006846	Populus Rhizosphere	LSYGEALLGDKQFAEACAELEKLKGKGLGPRDLGVPAARACMQKGDPDLAIAWLQSIPERFRPRELEKDPIFAPIQDRSDFKALFQPREP*
Ga0075431_1010705962	3300006847	Populus Rhizosphere	VYAELVAARPTEPRLRLSYGEALLGDSQFAAACTEFEKLKGKGLGPRDLGLPAARACMQKGDADTAIAWLKSIPTRFLPPSVQTEAVFAPVAGREDFKALFPAR*
Ga0075420_1000904943	3300006853	Populus Rhizosphere	VYAELVAARPTEPRLRLSYGEALLGDSQFAAACTEFEKLKGKGLGPRDLGLPAARACMQKGDADAAIAWLKSIPTRFLPPSVRTEAVFAPVAGREDFKALFPAR*
Ga0075434_1009164912	3300006871	Populus Rhizosphere	LVASRPDDSRLRLSYGEALLGNNQFGEACGEFEKLKGKGLGPRDLGLPAARACMQKGDADAAVAWLKTIPTRFLPTEVQDEAVFAPLKTREDFRALFTAR*
Ga0079215_112339622	3300006894	Agricultural Soil	NDARLRLSYGEALLADAQFAAACTELEKLKGKGLGPRDLGLPAARACMGKGDADAAIAWLKSIPTRFLPRSVQTEAAFAAIRDRADFKALFPAS*
Ga0079219_114128662	3300006954	Agricultural Soil	GHVQVRDFGKAVPIYANLVAARPDDARLRLSYGEALLGNAQFAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAMSWLKTIPTRFLPPDVQNDTVFAPLKTREDFRALFSSR*
Ga0079218_122008182	3300007004	Agricultural Soil	EALLADAQFAAACTELEKLKGKGLGPRDLGLPAARACMGKGDADAAIAWLKSIPTRFLPRSVQTEAAFAAIRDRADFKALFPAS*
Ga0111539_134739652	3300009094	Populus Rhizosphere	QVVAGDYHAAVVSYAQVLAARPDDPRLRLSYGEALIGDKQFAVACAEFEKLKGKGLGYRDLGLPAARACAQKGDLDTAVAWLKSIPKRFLPPNVQSDPAFAALQNRDDFRALFQTP*
Ga0105245_105791381	3300009098	Miscanthus Rhizosphere	AAEYASMVAARPDDARLRLAYGEALLGDTQYAAACAEFDRLRDKGLGYRDLGLPAARACLGKGDPQAAVAWLRTIPPQFLPSSVQQDPSFAALKDREDFKALFTRR*
Ga0115027_115896702	3300009131	Wetland	VRPRARCGNFAAAAATYADLVKAKPDDARLRLSYGEALLGASQFAAACAELEKLKGKGLGPRDLGVPAARACMQKGDADAAIAWLKSIPQRYL
Ga0126313_116912552	3300009840	Serpentine Soil	LAYGEALLGDGQAGSACSEFDKLRDKQRGARDLGLPAARACLQKGDPEGAVAWLRSIPAQYLPASTAQDPAFAPLRDRADFRALFERR*
Ga0126310_117388931	3300010044	Serpentine Soil	YASMLAARPDDARLRLAYGEALLGDGQAASACSEFDKLRDKQLGARDLGLPAARACLQKGDPEGAVAWLRSIPAQYLPASTAQDPAFAPLRDRADFRALFERR*
Ga0126306_113551131	3300010166	Serpentine Soil	KFSEAANEYARMVVAKPDDHRLRLSYGEALFGDKQYATACAEFEKLKGKGLGPRDLGLPAARACVLKGDGDAAIAWLNSIPARFLPAAVAQEPAFAPLQNRPDFQAIFTRR*
Ga0134128_120393432	3300010373	Terrestrial Soil	DFGKAVPIYADLVAARPDDARLRLSYGEALLGNAQFAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAMSWLKTIPTRFLPPDVQNDTVFAPLKTREDFRALFSSR*
Ga0134128_130416332	3300010373	Terrestrial Soil	VQVRDFGKAVPIYADLVAARPDDARLRLSYGEALLGNAQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIAWLTTIPTRFLPPDVQTDAVFAPLR
Ga0126383_119699781	3300010398	Tropical Forest Soil	AVPIYADLVASRPEDARLRLSYGEALLGNAQYAEACGELERLKGKGLGPRDLGLPAARACMLKGDADAAMAWLKTIPTRFLPPELQDDAVFTPLRSREDFRALFPPR*
Ga0134122_131564322	3300010400	Terrestrial Soil	AAAAAAYAKLVDSRPGDARLRLSYGEALLGGAQFAAACEEFDKLKGKGLGPRDLGLPAARACAQKGDADRAIAWLQTIPQRFLPPDAQKDTAFASLQNRSDFQALFRKY*
Ga0134122_133809711	3300010400	Terrestrial Soil	AAATAYATVLASHPDDIRVRLAYGEALLGDKQYSAACGEFDRLRGKGLGPRDLGLPAARACLLKGDHDASVAWLQSIPKRFLPSGIQQDTAFAPLRSRADFRALFQP*
Ga0134121_123990712	3300010401	Terrestrial Soil	AYGEALLGDTQYAAACAEFDRLRDKGLGYRDLGLPAARACLGKGDPQAAVAWLRTIPPQFLPSSVQQDPSFAALKDREDFKALFTRR*
Ga0134123_106286543	3300010403	Terrestrial Soil	GEALLGAGQAAAACSEFDKLRDKGLGYRDLGLPASRACLQKGDVDAAIAWLQSIPARYLPRAIAEDPAYASIKDHADFRALFERR*
Ga0134123_108307051	3300010403	Terrestrial Soil	REVIDRTLEFVLRVTTASYQAALRKGLPEASAAAAVSSGNFKQAASIYGEMLGRTPDDARLRLSYGEALLGDGQFATACGEFEKLKGKGLGYRDLGIPAARACMQKGDGDAAIAWLASIPVRFRPTELEKDPIFAPIQQRAEFKALFAR*
Ga0105246_107111071	3300011119	Miscanthus Rhizosphere	YANLVAARPDDARLRLSYGEALLGNAQFAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIAWLTTIPTRFLPPDVQTDAVFAPLRTREDFRALFSSR*
Ga0137423_12020722	3300011430	Soil	YARMVAAKPDDHRLRLSYGEALLGDKQYATACAEFEKLKGKGLGPRDLGLPAARACAQKGDAEAAIAWLNSIPARFLPASVAQDPVFAPLQNRPDFQAVFARR*
Ga0150985_1152133462	3300012212	Avena Fatua Rhizosphere	GEALLGNAQYAEACEELEKLKGKGLGPRDLGLPAARACMLKGDAEAAMAWLKTIPTRFLPPDVQDEAVFAPLKSREDFRALFAAR*
Ga0150984_1075126812	3300012469	Avena Fatua Rhizosphere	GPAAAAYASLLDTRPDDPRLRLSYGEALLGDKQYDAACSQFERLKGKGLGPRDLGLPAARACMLKGDSLAAIAWLQTIPKRFLPSSVQQDSIFAGLRERADFRSLFQP*
Ga0150984_1207599151	3300012469	Avena Fatua Rhizosphere	VQVRNFGKAVPIYADLVAARPDDARLRLSYGEALLGNAQYAEACGELEKLKGKGLGYRDLGLPAARACMLKGDADAAMAWLKTIPTRFLPPEV*
Ga0157315_10628851	3300012508	Arabidopsis Rhizosphere	QVRDFAKAVPIYADLVAARPDDARLRLSYGEALLGNTQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIGWLKTIPTRFLPLDLQDDAVFAPLKSREDFRALFPSR*
Ga0137416_114585352	3300012927	Vadose Zone Soil	YARMAAARPEDARLRLAYGEALLGDAQYATACAEFDKLRGKGRGYRDLGLPAARACAQKGDTDTAIAWLASIPPQFLPGSVSQDPAFAALQKRPDFQALFARR*
Ga0164308_101159621	3300012985	Soil	LRLSYGEALLGNAQYGEACGALEKLKGKGLGARDLGLPAARACMLKGDGVAAMAWLKTIPTRFLPPDVQDDAVFAPLKAREDFRALFPAR*
Ga0157373_110461032	3300013100	Corn Rhizosphere	YVQVRNFARAVPIYADLVAARPDDARLRLSYGEALLGNAQYGEACGELEKLKGKGLGPRDLGLPAARACMLKGDGDAAMAWLKTIPTRFLPPDVQDDAVFAPLKAREDFRALFPAR*
Ga0075325_11871331	3300014270	Natural And Restored Wetlands	RFGDTVRAYAQVLAARPDDARLRLSYGEALLGDGQYARACAEFESLKGRGLGYRDLGLPAARACLLKGDPDAAVAWLASIPARFRPVQLRDDPAFAPLRERADFKALFDGR*
Ga0163163_127753351	3300014325	Switchgrass Rhizosphere	RKFKEAAAEYARMVAARPDDARLRLAYGEALLGDGQFGTACAEFDRLRGKGLGYRDLGLPAARACAQKPDPDAAIAWLNSIPARFLPASVAQEPVFASLQNRPDFQAIFRRQ*
Ga0157380_121427722	3300014326	Switchgrass Rhizosphere	MVAARPDDARLRLAYGEALLGDTQYAAACAEFDRLRDRGLGYRDLGLPAARACLGKGDPQAAVAWLRTIPPQFLPSSVQQDPSFAALKDREDFKALFTRR*
Ga0157380_127606021	3300014326	Switchgrass Rhizosphere	KPDDPRVRLSYGEALLGASQFAAACAELEKLKGQGLGPRDLGLPAARACVQSGNHEAAIAWLKSIPSRFLPGDVEREPVFAPLQNRPDFKALFAPAR*
Ga0132258_133126351	3300015371	Arabidopsis Rhizosphere	AAFQYAQLVAGRPDDARLRLAYGEALLGNHQYAVACAELEKLKDKGLGYRDLGLPGARARMLKGDADAAIGWLQSIPQRFLPSDIETDPVFASLQTRQDFRALFKR*
Ga0132256_1004222291	3300015372	Arabidopsis Rhizosphere	DFAKAVPIYADLVAARPDDARLRLSYGEALLGNTQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDAEAAMAWLKTIPTRFLPPDVQNEAVFAPLKSREDFRALFPAR*
Ga0132257_1043186911	3300015373	Arabidopsis Rhizosphere	GLPEASAAAAVSSGNFKQAASIYQEMLGRTPDDARLRLSYGEALLGDGQFGAACGEFEKLKGKGLGYRDLGIPAARACMQKGNGDAAIAWIASIPVRFRPMEIEKDPIFAPVQQRAEFKALFAR*
Ga0132255_1011487831	3300015374	Arabidopsis Rhizosphere	RLVESRPADARLRLSYGEALLGDAQFAAACDEFEKLKGKGLGPRDLGLPAARACAQAGDAVRAIAWLQSIPQRFLPADAQKDAAFASIQNRSDFQALFNR*
Ga0132255_1033985222	3300015374	Arabidopsis Rhizosphere	ASHPDDIRVRLAYGEALLGDKQYSTACSEFDRLRGKGLGPRDLGLPAARACVLKGDHDASVAWLQSIPKRFLPSSVQQDSAFAPLRGRADFRALFQP*
Ga0190266_110611362	3300017965	Soil	SGYAELVKAKPDDARLRLSYGEALLGASKFAEACAELDKLKGKGLGPRDLGLPAARACLQKGDADAAIGWLKSIPQRYLPRDIEKDPAFAPLREREDFKALFRTGG
Ga0184612_100059205	3300018078	Groundwater Sediment	ASQFAAACTEFEKLKGKGLGPRDLGVPAARACMQKGDAEAAIAWLKSIPQRYLPRALEKDPIFAPIQNRPDFKALFQMGG
Ga0184629_102410911	3300018084	Groundwater Sediment	PADARVRLSYGEALLGDGQFAAACGELEKLKGKGLGPRDLGLPAARACAQNRDADRAIAWLQTIPQRFLPLDAQKDAAFASLQNRSDFQALFKR
Ga0190265_106138011	3300018422	Soil	VQVRLAYGEALLADSQFAAACAEFDKLRGKGLGPRDLGLPAARACVQKGDADRAIAWLQSIPQRFLPPAVQSEAVFAPLRDRADFQALFKR
Ga0190265_117393352	3300018422	Soil	AAADAYARLVAARPDDARLRLSYGEALLGGSQFAAACAEFERLKGKGLGPRDLGLPAARACLQKGDAEAAIAWLASIPTRFLPRAVESEPVFAPIRERADFKALFAAGR
Ga0190265_125155221	3300018422	Soil	DDARLRLSYGEALLADAQFAAACGEFEKLTGKGLGPRDLGLPAARACAQMGDGDRAVAWIRSIPSRFLPADVQKDAALASLHGRADFQALFKR
Ga0190270_133674401	3300018469	Soil	TGNFAAAASSYAALVKARPDDARLRLSYGEALLGAAQFDAACTELEKLKGKGLGPRDLGMPAARACMQKGDADAAIAWLKSIPQRFLPRALEKDPIFAPLQNRAEFKALFQTGG
Ga0190274_126892192	3300018476	Soil	SYGEALLGAAQFAAACSVFDQLKGKGLGPRDLGLPAARACLQKGDADAAVAWLASIPARFLPRTIESEPVFAPLRERPDFKALFAAGR
Ga0190271_133160651	3300018481	Soil	EYARMVAARPDDARLRLAYGEALLGDGQFGTACAEFDKLRGKGLGYRDLGLPAARACVQKGDADAAIAWLNSIPARFLPASVAQEPVFASLQNRPDFQAIFRRH
Ga0173481_108694762	3300019356	Soil	NVRESVAAGHVMGGRFHEAAAAYAELVSTAPENHTLRLAYGEALLGDKQFGAACDELEKLKGKGLGYRDLGIPAARACMQKGDTNAAIAWLQSIPVRFRPMELFDDPIFAPIKDRAEFKALFEGR
Ga0193755_10932963	3300020004	Soil	DARLRLAYGEALLGDTQYATACAEFDKLRDKGLGYRDLGLPAARACALKGDLDAAIAWLKSIPPQFLPASVAQDPALRSLRNRAEFQALFTRR
Ga0193697_10038361	3300020005	Soil	GLPEAIAAALVTSGNFAAAAAAYAKLVDSRPGNPRLRLSYGEALLGGAQFAAACEEFDKLKGKGLGPRDLGLPAARACAQKGDADRAIAWLQTIPQRFLPPDAQKDTAFASLQNRSDFQALFRK
Ga0210409_104379932	3300021559	Soil	AAEVVTGDFSAAAAAYASLVRDRPTDARLALAYGEALLGNHQYGDACAELAYLKNKGLGPRDLGLPAARACAQTGDADAAIAWLQSIPSQYLPREIADDSAFTALRARADFRALFQPRS
Ga0247794_102729751	3300024055	Soil	LGASQFATACAEFERLKGKGLGPRDLGLPAARACMQKGDAEAAVAWLRSIPSRFLPRDVQAEPAFAPIRERADFKALFPAGPAR
Ga0209109_101841011	3300025160	Soil	LRLSYGESLLGAGQFAAACGELEKLKGKGLGPRDLGVPAARACAQKGDPDAAVAWLTSIPARFRPPQLKDDPAFVTLRDRADFKALFAGR
Ga0207645_109882062	3300025907	Miscanthus Rhizosphere	LRLSYGEALLGASQFATACAEFERLKGKGLGPRDLGLPAARACMQKGDAEAAVAWLRSIPSRFLPRDVQAEPAFAPIRERADFKALFPAGPAR
Ga0207643_107987581	3300025908	Miscanthus Rhizosphere	PDDPRVRLSYGEALLGASQFAAACAELETLKGKGLGPRDLGLPAARACVQSGNHDAAIAWLKSIPSRFLPGDVEKDPVFAPLQNRLDFKALFVPAR
Ga0207705_114961081	3300025909	Corn Rhizosphere	LDGVERRALAEVVAADEQGQPAGVVAARPDDARLRLSYGEALLGNAQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIAWLTTIPTRFLPPDVQTDAVFAPLRTREDFRALFSSR
Ga0207657_102984051	3300025919	Corn Rhizosphere	RDFGKAVPIYADLVAARPDDARLRLSYGEALLGNAQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIAWLTTIPTRFLPPDVQTDAVFAPLRTREDFRALFSSR
Ga0207681_111341341	3300025923	Switchgrass Rhizosphere	PDDPRLRLSYGEALIGDKQYAVACAEFEKLKGKPLGPRDLGLPAARACAQMGDLDKAVAWLKSIPKRFLPPQVQSDPAFAAMQNRDDFRALFQAP
Ga0207681_114892502	3300025923	Switchgrass Rhizosphere	GKFHEAAATYSSMVAARPEDARLRLAYGEALLGDGQAAAACTEFDKLRDKGLGYRDLGLPAARACLQKGDPEAAIAWLRTIPSRFLPPSIGQDPAFAALRNRPDFLALFERR
Ga0207650_118761072	3300025925	Switchgrass Rhizosphere	LPEATAAGQVVAGDYHAAVVAYAQVVAARPDDPRLRLSYGEALIGDKQYAVACAEFEKLKGKPLGPRDLGLPAARACAQMGDLDKAVAWLKSIPKRFLPPQVQSDPAFGAMQNRDDFRALFQAP
Ga0207709_110024521	3300025935	Miscanthus Rhizosphere	MVAARPDDARLRLAYGEALLGDTQYAAACAEFDRLRDKGLGYRDLGLPAARACLGKGDPQAAVAWLRTIPPQFLPSSVQQDPSFAALKDREDFKVLFTWW
Ga0207670_109943401	3300025936	Switchgrass Rhizosphere	SYGEALLGNSQYAAACGELEKLKGKGLGPRDLGLPAARACMLKGDSDAAIAWLKTIPSRFLPPDVRDEAVFAPLKSREDFRALFPAR
Ga0207689_113889552	3300025942	Miscanthus Rhizosphere	SQFATACAEFERLKGKGLGPRDLGLPAARACMQKGDAEAAVAWLRSIPSRFLPRDVQAEPAFAPIRERADFKALFPAGPAR
Ga0207661_121197492	3300025944	Corn Rhizosphere	DDARLRLSYGEALLGNAQFAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAMSWLKTIPTRFLPPDVQNDTVFAPLKTREDFRALFSSR
Ga0207679_116594082	3300025945	Corn Rhizosphere	DARLRLSYGEALLGDKQYSEACSQFDRLKGKGLGPRDLGIPAARACLLKGDSSAAIGWLQSIPKRFLPASLQDDSLFAGLKSRADFRQLFVP
Ga0207658_120100741	3300025986	Switchgrass Rhizosphere	FHAAASAYATVLASHPDDIRVRLAYGEALLGDKQYSTACSEFDRLRGKGLGPRDLGLPAARACVLKGDHDASVAWLQSIPKRFLPSSVQQDSAFAPLRGRADFRALFQP
Ga0207639_114030241	3300026041	Corn Rhizosphere	ILAGTSDDPAMRLSYGEALLGDKQYGTACSEFEKLKGKGLGYRDLGLPAARACLLKGDAEAAVAWLASIPPQFRPAQLRDDPAFAPLKERADFQALFAGR
Ga0207641_105816052	3300026088	Switchgrass Rhizosphere	TAAAHVATQNFAAASSIYRDLVAAKPDDPRLRLSFGEALLGATHFADACAQFAQLRGKGLGPRDLGLPAARACVLAGDQETAIGWLKSIPSRFLPRSVESDSAFAPLRARPDFRALFTPP
Ga0207641_120993442	3300026088	Switchgrass Rhizosphere	LLGASQFATACAEFERLKGKGLGPRDLGLPAARACMQKGDAEAAVAWLRSIPSRFLPRDVQAEPAFAPIRERADFKALFPAGPAR
Ga0207648_112944251	3300026089	Miscanthus Rhizosphere	SPADARLRLSYGEALLGDGQFSAACDEFEKLKGKGLGPRDLGLPAARACAQNSDADRAIAWLQTIPQRFLPLDAQQDAAFASLQNRSDFQALFRKY
Ga0207674_117751921	3300026116	Corn Rhizosphere	YLAALRRGLPEATAAGQVVAGDYHAAVVAYAQVVAARPDDPRVRLSYGEALIGDKQFAVACAEFEKLKGKGLGYRDLGLPAARACAQKGDLDTAVAWLKSIPKRFLPPNVQSDPAFAALQNRDDFRALFQAP
Ga0207675_1008806352	3300026118	Switchgrass Rhizosphere	DLVKARPDDPRLRLSYGEALLGAAQFAAACSVFDQLRNRGLGPRDLGVPAARACMQKGDAEAAIAWIASIPTQYRPRAIEADPIFAPIRERAAFKALFEAGR
Ga0207683_106380482	3300026121	Miscanthus Rhizosphere	VVAVSLNIAARPDDPRLRLSYGEALIGDKQYAVACAEFEKLKGKPLGPRDLGLPAARACAQMGDLDKAVAWLKSIPKRFLPPQVQSDPAFGAMQNRDDFRALFQAP
Ga0207698_108929882	3300026142	Corn Rhizosphere	LVAARPDDARLRLSYGEALLGNAQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAMSWLKTIPTRFLPPDVQTDAVFAPLRTREDFRALFSSR
Ga0207547_1070431	3300026807	Soil	RLRLSYGEALLGNAQYAEACGELEKLKGKGLGPRDLGLPAARACMLKGDADAAIAWLTTIPTRFLPPDVQTDAVFAPLRTREDFRALFSSR
Ga0209813_101900271	3300027866	Populus Endosphere	PRLRLSYGEALLGAAQFAAACSVFDQLRNRGLGPRDLGLPAARACMQKGDGEAAIAWIASIPPQYRPRAIEADPVFAPVRERADFKALFAAGR
Ga0268266_103792092	3300028379	Switchgrass Rhizosphere	VKARPDDARLRLSYGEALFGASQFAAACSVFDQLKNKGQGPRDLGLPAARACAQKGDGDAAIAWLRSIPSRCLPRDVQADPVFAPMRERADFKALFEAGR
Ga0268266_119649042	3300028379	Switchgrass Rhizosphere	LHNALPEAAAAAHVIAGDFHAAASAYATVLASHPDDIRVRLAYGEALLGDKQYSAACGEFDRLRGKGLGPRDLGLPAARACLLKGDHDASVAWLQSIPKRFLPSSVQQDSAFAPLRGRADFRALFQP
Ga0247828_106563721	3300028587	Soil	RLAYGEALLGDKQFGAACDELEKLKGKGLGYRDLGIPAARACMQKGDTNAAIAWLQSIPVRFRPMELFDDPIFAPIKDRAEFKALFEGR
Ga0247824_1000293410	3300028809	Soil	MGGRFHEAAAAYAELVSTAPENHTLRLAYGEALLGDKQFGAACDELEKLKGKGLGYRDLGIPAARACMQKGDTNAAIAWLQSIPVRFRPMELFDDPIFAPIKDRAEFKALFEGR
Ga0310887_108943172	3300031547	Soil	RLAYGEALLGDKQFETACAEFEKLKGKALGYRDLGLPAARACMQKGDPEAAIAWLRSIPQRFLPPSVAKEPVFASIQERPDFQALFQPR
Ga0310886_105033862	3300031562	Soil	KNKPNDARLGLSYGEALLGSSQFGAACAQLGKLKGKGLGPRDLGLPAARACMRSGDADTALAWLKSIPQRFLPQDVERDPIFAPLQTRQEFKALFVKSGG
Ga0310886_107433311	3300031562	Soil	TAAAAAYAELVKQKPQDVRLRLSYGEALLGASQFAAACAELDKLKGKGLGPRDLGLPAARACMQKGDGDAAIAWLKSIPQRFLPREIEKDPVFAPVQDRAEFKALFRPGG
Ga0310907_103915982	3300031847	Soil	TAAANVATGKFKEAAAAYGEMVKARPDDHRLRLSYGEALLGDKQFAEACTELEKLKGKGLGPRDLGVPAARACMQKGDPDLAIAWLQSIPERFRPRELEKDPIFAPIQDRSDFKALFQPREP
Ga0310904_113625231	3300031854	Soil	SYADLVKKKPDDARLGLSYGEALLGSSQFAAACAQLGRLKGKGLGARDLGLPAARACMQNGDADVALAWLKSIPQRYLPQEVEKDPIFAPLQARPEFAALFKSGGSEKD
Ga0310892_101081591	3300031858	Soil	RAAASYAELVKNKPDDARLGLSYGEALLGSSQFGAACAQLGKLKGKGLGPRDLGLPAARACMRSGDADTALAWLKSIPQRFLPQDVERDPIFAPLQTRQEFKALFVKSGG
Ga0310892_111465552	3300031858	Soil	LGDKQFAEACAELEKLKGKGLGPRDLGVPAARACMQKGDPDLAIAWLQSIPERFRPRELEKDPIFAPIQDRSDFKALFQPREP
Ga0306925_106373201	3300031890	Soil	SLVAAHPDDARLRLSYGEALLGAARYAAACAEFEKLKGKGLGPRDLGLPAAEACMKNGDPETAITWLRTIPPQFRPATLQDDPAFAALRDRPDFRALFVK
Ga0307406_102994911	3300031901	Rhizosphere	EAAAAYGEMVKARPDDHRLRLSYGEALLGDRQFAEACVELEKLKGKGLGPRDLGVPAARACMQKGDPDLAIAWLQSIPERFRPRDLEKDPIFAPIQDRADFRALFQPREP
Ga0307406_104661382	3300031901	Rhizosphere	EALLGAGRAAEACAELETLKDKGLGPRDLGLPAARACLQKGDPERAVAWLAAIPPRYRPAGLMDDPAFAALREREDFRALFERR
Ga0310885_107557832	3300031943	Soil	EAAAPYPSMGAARPEDARLRLAYGEALLGDGQAAAACSEFDKLRDKGLGYRDLGLPAARACLQKGDPEAAIAWLRTIPSRFLPPSIGQDPAFAALRNRPDFLALFERR
Ga0308176_109455601	3300031996	Soil	AAHVQGGRFADAVAASAEVLRARPDDPTLRLAYGEALLGAGRAADACAEFERLKGKGLGYRDLGLPAARACMRKGDADAAVAWLRSIPARFLPTAVRDEPVFGPLRERADFRALFDGR
Ga0307416_1000680664	3300032002	Rhizosphere	YGEALLGDRQFAEACVELEKVKGKGLGPRDLGVPAARACMQKGDPDLAIAWLQSIPERFRPRDLEKDPIFAPIQDRADFKALFQPREP
Ga0310897_104759961	3300032003	Soil	PNDARLGLSYGEALLGSSQFGAACAQLGKLKGKGLGPRDLGLPAARACMRSGDADTALAWLKSIPQRFLPQDVERDPIFAPLQTRQEFKALFVKSGG
Ga0310897_106228952	3300032003	Soil	PDDPRVRLAYGEALLGASQFAAACAELEQVKGKGLGPRDLGLPAARACVQSGNHDAAIAWLKSIPSRFLPGDVEKDPVFAPLQNRADFKALFQPGR
Ga0307411_105383593	3300032005	Rhizosphere	YGEALLGDGQAASACSEFDKLRDKQLGPRDLGLPAARACLQKGDPEAAVAWLRSIPAQYLPASTADDPAFAPLRERADFRALFERR
Ga0310902_107953921	3300032012	Soil	VRRGLQEATAAANVATGKFKEAAAVYGEMVKARPDDHRLRLSYGEALLGDRQFAEACVELEKLKGKGLGPRDLGVPAARACMQKGDPDLAIAWLQSIPERFRPRELEKDPIFAPIQDRSDFKALFQPREP
Ga0310899_106249121	3300032017	Soil	GDAQFRAACDEFEKIKGKGLGPRDLGLPAARACAQAGDAVRAVAWLQSIPQRFLPADAQKDAAFASIQSRSDFQALFKR
Ga0310890_102966521	3300032075	Soil	LSYGEALLGASQFAAACAEFERLKGKGLGPRDLGLPAARACVQKGDAEAAIAWLASIPARFLPGAVESEPAFAPIRERPDFKALFAAGR
Ga0310890_110940312	3300032075	Soil	YAELVKGKPDDPRVRLSYGEALLGASQFAAACAELETLKGKGLGPRDLGLPAARACVQSGNHDAAIAWLKSIPSRFLPGDVEKDPVFAPLQNRLDFKALFVPAR
Ga0310890_115865991	3300032075	Soil	GLPEATAAGQVVSGNYHAAVLTYAQVLAARPDDPRLRLSYGEALIGDKQFAVACAEFEKLKGKGLGYRDLGLPAARACAQKGDLDTAVAWLKSIPKRFLPTQVQSDPAFAALQNRDDFRALFQAP
Ga0310889_100274801	3300032179	Soil	KPQDVRLRLSYGEALLGASQFAAACAELDQLKGKGLGPRDLGLPAARACMQKGDGDAAIAWLKSIPQRFLPREIEKDPVFAPVQDRAEFKALFRPGG
Ga0310896_100585691	3300032211	Soil	GLQEATAAANVVTGKFKEAAAAYGEMVKARPDDHRLRLSYGEALLGDKQFAEACAELEKLKGKGLGPRDLGVPAARACMQKGDPDLAIAWLQSIPERFRPRELEKDPIFAPIQDRSDFKALFQPREP
Ga0310896_100967392	3300032211	Soil	ALLGSSQFGAACAQLGKLKGKGLGPRDLGLPAARACMRSGDADTALAWLKSIPQRFLPQDVERDPIFAPLQTRQEFKALFVKSGG
Ga0310810_110580862	3300033412	Soil	ELVKAKPGDPRVRLSYGEALLGASQFAAACAELEKLKGQGLGPRDLGLPAARACVQSGNHEAAIAWLKSIPSRFLPGDVEREPVFAPLQNRPDFKALFAPAR
Ga0364927_0128082_455_718	3300034148	Sediment	ALLGASQFAAACGELEKLKGKGLGPRDLAVPAATACMQMGDADAAIAWLKSIPYQYRQRDLEKDPVFAPLQARPDFKALFQPDTTGR
Ga0364929_0338413_257_520	3300034149	Sediment	SYGEARLGAGQYAAACSELEKLKGKGLGPRDLGLPAARACMQKGDAEAAIAWLKTIPTRFLPPQVQNETVFAPLQSREDFKALFPSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042428

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences