Metagenome / Metatranscriptome Family F042355

Basic Information
Family ID	F042355
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	43 residues
Representative Sequence	MSTDLKQVNKLKKNSRRNDNRNEPKFVERLIKISRVSKVTKGG
Number of Associated Samples	139
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.92 %
% of genes near scaffold ends (potentially truncated)	86.71 %
% of genes from short scaffolds (< 2000 bps)	77.85 %
Associated GOLD sequencing projects	135
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (56.329 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (21.519 % of family members)
Environment Ontology (ENVO)	Unclassified (37.975 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (72.152 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.44% β-sheet: 0.00% Coil/Unstructured: 60.56%
Feature Viewer

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Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF00861	Ribosomal_L18p	56.33
PF00347	Ribosomal_L6	18.99
PF00410	Ribosomal_S8	6.96
PF00673	Ribosomal_L5_C	5.06
PF00238	Ribosomal_L14	3.16
PF17136	ribosomal_L24	1.90
PF00344	SecY	1.90
PF00333	Ribosomal_S5	1.27
PF01578	Cytochrom_C_asm	0.63
PF03719	Ribosomal_S5_C	0.63
PF03947	Ribosomal_L2_C	0.63
PF00572	Ribosomal_L13	0.63
PF00203	Ribosomal_S19	0.63
PF07650	KH_2	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0256	Ribosomal protein L18	Translation, ribosomal structure and biogenesis [J]	56.33
COG0097	Ribosomal protein L6P/L9E	Translation, ribosomal structure and biogenesis [J]	18.99
COG0096	Ribosomal protein S8	Translation, ribosomal structure and biogenesis [J]	6.96
COG0094	Ribosomal protein L5	Translation, ribosomal structure and biogenesis [J]	5.06
COG0093	Ribosomal protein L14	Translation, ribosomal structure and biogenesis [J]	3.16
COG0098	Ribosomal protein S5	Translation, ribosomal structure and biogenesis [J]	1.90
COG0201	Preprotein translocase subunit SecY	Intracellular trafficking, secretion, and vesicular transport [U]	1.90
COG0090	Ribosomal protein L2	Translation, ribosomal structure and biogenesis [J]	0.63
COG0102	Ribosomal protein L13	Translation, ribosomal structure and biogenesis [J]	0.63
COG0185	Ribosomal protein S19	Translation, ribosomal structure and biogenesis [J]	0.63

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.33 %
Unclassified	root	N/A	43.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.33 %
Unclassified	root	N/A	43.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.33 %
Unclassified	root	N/A	43.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	29.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.67 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	27.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	27.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.67 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.63 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.67 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.27 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.63 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000944\|BBAY81_10063943	Not Available	632	Open in IMG/M
3300002372\|B570J29634_100545	Not Available	1652	Open in IMG/M
3300002835\|B570J40625_100909442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	761	Open in IMG/M
3300003265\|JGI26118J46590_1009477	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300003621\|JGI26083J51738_10065113	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300004011\|Ga0055460_10271565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	544	Open in IMG/M
3300005824\|Ga0074474_1408015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	35140	Open in IMG/M
3300005825\|Ga0074476_1247737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	5702	Open in IMG/M
3300005828\|Ga0074475_10533089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	15842	Open in IMG/M
3300005836\|Ga0074470_10189775	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005988\|Ga0075160_10707342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	535	Open in IMG/M
3300006056\|Ga0075163_11399914	Not Available	686	Open in IMG/M
3300006373\|Ga0075483_1207227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1311	Open in IMG/M
3300006393\|Ga0075517_1524337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1620	Open in IMG/M
3300006394\|Ga0075492_1532996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2571	Open in IMG/M
3300006397\|Ga0075488_1563361	Not Available	648	Open in IMG/M
3300006399\|Ga0075495_1535365	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006400\|Ga0075503_1031691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4516	Open in IMG/M
3300006868\|Ga0075481_10300144	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300006869\|Ga0075477_10190906	Not Available	842	Open in IMG/M
3300007217\|Ga0079268_1315763	Not Available	552	Open in IMG/M
3300007242\|Ga0075172_1574303	Not Available	1222	Open in IMG/M
3300007250\|Ga0075165_1041389	Not Available	579	Open in IMG/M
3300007250\|Ga0075165_1084468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2972	Open in IMG/M
3300007551\|Ga0102881_1026515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1631	Open in IMG/M
3300007551\|Ga0102881_1208896	Not Available	540	Open in IMG/M
3300007614\|Ga0102946_1388401	Not Available	530	Open in IMG/M
3300007629\|Ga0102895_1018736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1723	Open in IMG/M
3300007981\|Ga0102904_1011549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1928	Open in IMG/M
3300007981\|Ga0102904_1023324	Not Available	1378	Open in IMG/M
3300007981\|Ga0102904_1126282	Not Available	602	Open in IMG/M
3300007986\|Ga0100380_10282916	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300008095\|Ga0100392_1254167	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300008106\|Ga0114339_1033717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2810	Open in IMG/M
3300008264\|Ga0114353_1003918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	10258	Open in IMG/M
3300008929\|Ga0103732_1021677	Not Available	923	Open in IMG/M
3300008931\|Ga0103734_1010935	Not Available	1230	Open in IMG/M
3300009026\|Ga0102829_1077788	Not Available	1018	Open in IMG/M
3300009080\|Ga0102815_10212187	Not Available	1065	Open in IMG/M
3300009080\|Ga0102815_10917418	Not Available	502	Open in IMG/M
3300009141\|Ga0102884_1108477	Not Available	699	Open in IMG/M
3300009327\|Ga0103843_102554	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300009422\|Ga0114998_10108622	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300009432\|Ga0115005_10077081	All Organisms → cellular organisms → Bacteria	2553	Open in IMG/M
3300009436\|Ga0115008_10644124	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300009515\|Ga0129286_10190266	Not Available	686	Open in IMG/M
3300009543\|Ga0115099_10660583	Not Available	1193	Open in IMG/M
3300009592\|Ga0115101_1690705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3942	Open in IMG/M
3300009606\|Ga0115102_10920652	Not Available	851	Open in IMG/M
3300009608\|Ga0115100_10464832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1982	Open in IMG/M
3300009608\|Ga0115100_10612678	Not Available	546	Open in IMG/M
3300009677\|Ga0115104_10184917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	14852	Open in IMG/M
3300009728\|Ga0123371_128878	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300009787\|Ga0116226_11855085	Not Available	549	Open in IMG/M
3300010370\|Ga0129336_10088527	Not Available	1822	Open in IMG/M
3300011012\|Ga0150979_1463343	Not Available	956	Open in IMG/M
3300012408\|Ga0138265_1259339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	3807	Open in IMG/M
3300012408\|Ga0138265_1314007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	7921	Open in IMG/M
3300012408\|Ga0138265_1447673	Not Available	501	Open in IMG/M
3300012418\|Ga0138261_1257929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	7534	Open in IMG/M
3300012518\|Ga0129349_1165542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1190	Open in IMG/M
3300012524\|Ga0129331_1465546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	3957	Open in IMG/M
3300012782\|Ga0138268_1588910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	7604	Open in IMG/M
3300012928\|Ga0163110_10809388	Not Available	737	Open in IMG/M
3300012954\|Ga0163111_10439958	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300012965\|Ga0129346_1032754	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300017764\|Ga0181385_1198369	Not Available	606	Open in IMG/M
3300018605\|Ga0193339_1002109	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300018635\|Ga0193376_1001105	Not Available	1637	Open in IMG/M
3300018723\|Ga0193038_1061680	Not Available	576	Open in IMG/M
3300018930\|Ga0192955_10012920	Not Available	1443	Open in IMG/M
3300018930\|Ga0192955_10021880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1244	Open in IMG/M
3300018930\|Ga0192955_10058242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	900	Open in IMG/M
3300018930\|Ga0192955_10183225	Not Available	540	Open in IMG/M
3300018942\|Ga0193426_10000155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4367	Open in IMG/M
3300019009\|Ga0192880_10000490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4216	Open in IMG/M
3300019010\|Ga0193044_10024324	Not Available	1815	Open in IMG/M
3300019010\|Ga0193044_10064060	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300019021\|Ga0192982_10001590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2954	Open in IMG/M
3300019021\|Ga0192982_10040705	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300019022\|Ga0192951_10019828	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300019036\|Ga0192945_10270841	Not Available	534	Open in IMG/M
3300019037\|Ga0192886_10084570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	904	Open in IMG/M
3300019049\|Ga0193082_10005811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2021	Open in IMG/M
3300019050\|Ga0192966_10056941	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300019053\|Ga0193356_10294399	Not Available	571	Open in IMG/M
3300019103\|Ga0192946_1002222	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300019125\|Ga0193104_1002441	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300019701\|Ga0194015_1010463	Not Available	917	Open in IMG/M
3300019703\|Ga0194021_1035025	Not Available	568	Open in IMG/M
3300019719\|Ga0193977_1034144	Not Available	631	Open in IMG/M
3300019737\|Ga0193973_1027810	Not Available	681	Open in IMG/M
3300019749\|Ga0193983_1064695	Not Available	567	Open in IMG/M
3300020084\|Ga0194110_10764238	Not Available	590	Open in IMG/M
3300020162\|Ga0211735_10429820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	32059	Open in IMG/M
3300021169\|Ga0206687_1086693	Not Available	588	Open in IMG/M
3300021169\|Ga0206687_1191956	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300021169\|Ga0206687_1897978	Not Available	595	Open in IMG/M
3300021266\|Ga0210348_150286	All Organisms → cellular organisms → Bacteria	2342	Open in IMG/M
3300021267\|Ga0210353_125427	All Organisms → cellular organisms → Bacteria	2848	Open in IMG/M
3300021273\|Ga0210340_1050216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2402	Open in IMG/M
3300021275\|Ga0210342_147795	Not Available	573	Open in IMG/M
3300021278\|Ga0210332_131606	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300021282\|Ga0210303_1033778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	3271	Open in IMG/M
3300021282\|Ga0210303_1063427	Not Available	916	Open in IMG/M
3300021293\|Ga0210358_178454	Not Available	645	Open in IMG/M
3300021298\|Ga0210349_1143755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2838	Open in IMG/M
3300021305\|Ga0210296_1076650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8714	Open in IMG/M
3300021317\|Ga0210309_1050518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4561	Open in IMG/M
3300021329\|Ga0210362_1353221	Not Available	871	Open in IMG/M
3300021356\|Ga0213858_10200699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	968	Open in IMG/M
3300021364\|Ga0213859_10040178	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300021379\|Ga0213864_10039745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2223	Open in IMG/M
3300022171\|Ga0213857_1013719	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300022220\|Ga0224513_10326713	Not Available	613	Open in IMG/M
3300022366\|Ga0210344_100597	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300022372\|Ga0210293_114423	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300022389\|Ga0210318_1158020	Not Available	509	Open in IMG/M
3300024262\|Ga0210003_1246127	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300024346\|Ga0244775_11556031	Not Available	504	Open in IMG/M
3300024348\|Ga0244776_10963826	Not Available	500	Open in IMG/M
3300024532\|Ga0256352_1007508	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300024534\|Ga0256357_1062608	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300025035\|Ga0210011_1045993	All Organisms → cellular organisms → Bacteria	2277	Open in IMG/M
3300025632\|Ga0209194_1116317	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300025751\|Ga0208150_1197299	Not Available	622	Open in IMG/M
3300025832\|Ga0209307_1038918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1808	Open in IMG/M
3300025879\|Ga0209555_10187712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	839	Open in IMG/M
3300025896\|Ga0208916_10275017	Not Available	732	Open in IMG/M
3300025997\|Ga0210013_1054646	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300026131\|Ga0209928_1036776	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300026138\|Ga0209951_1102488	Not Available	587	Open in IMG/M
3300027186\|Ga0208797_1043118	Not Available	575	Open in IMG/M
3300027195\|Ga0208676_1013313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	760	Open in IMG/M
3300027204\|Ga0208924_108180	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300027212\|Ga0208554_1050941	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300027230\|Ga0208171_1015706	Not Available	756	Open in IMG/M
3300027243\|Ga0208174_1002976	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300027243\|Ga0208174_1033160	Not Available	652	Open in IMG/M
3300027320\|Ga0208923_1092060	Not Available	536	Open in IMG/M
3300027526\|Ga0209968_1097012	Not Available	536	Open in IMG/M
3300027553\|Ga0208947_1120059	Not Available	583	Open in IMG/M
3300027673\|Ga0209278_1247254	Not Available	514	Open in IMG/M
3300027813\|Ga0209090_10335080	Not Available	742	Open in IMG/M
(restricted) 3300027837\|Ga0255041_10409255	Not Available	500	Open in IMG/M
3300027849\|Ga0209712_10205926	Not Available	1120	Open in IMG/M
3300027849\|Ga0209712_10820494	Not Available	507	Open in IMG/M
3300027906\|Ga0209404_10061114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2153	Open in IMG/M
3300029998\|Ga0302271_10202214	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300030294\|Ga0311349_11989222	Not Available	535	Open in IMG/M
3300031223\|Ga0307981_1110370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	784	Open in IMG/M
3300031716\|Ga0310813_10483680	Not Available	1079	Open in IMG/M
3300032231\|Ga0316187_11122506	Not Available	575	Open in IMG/M
3300032263\|Ga0316195_10207541	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300032272\|Ga0316189_10209773	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300032272\|Ga0316189_10782661	Not Available	726	Open in IMG/M
3300032373\|Ga0316204_10677964	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300033524\|Ga0316592_1011196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1819	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.67%
Engineered	Engineered	3.80%
Host-Associated	Host-Associated	2.53%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	90.51%
Wastewater	Engineered → Wastewater	3.80%
Terrestrial	Environmental → Terrestrial	3.16%
Plants	Host-Associated → Plants	1.90%
Algae	Host-Associated → Algae	0.63%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	74.05%
Freshwater	Environmental → Aquatic → Freshwater	12.03%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	3.80%
Sediment	Environmental → Aquatic → Sediment	3.16%
Soil	Environmental → Terrestrial → Soil	1.90%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.27%
Peat	Environmental → Terrestrial → Peat	1.27%
Green Algae	Host-Associated → Algae → Green Algae	0.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.63%
Peat Moss	Host-Associated → Plants → Peat Moss	0.63%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	24.05%
Unclassified	Environmental → Aquatic → Marine → Unclassified	20.89%
Coastal	Environmental → Aquatic → Marine → Coastal	13.92%
Oceanic	Environmental → Aquatic → Marine → Oceanic	10.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.80%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	3.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.16%
Lake	Environmental → Aquatic → Freshwater → Lake	2.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.53%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.27%
River	Environmental → Aquatic → Freshwater → River	1.27%
Strait	Environmental → Aquatic → Marine → Strait	1.27%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.63%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.63%
Sediment	Environmental → Aquatic → Marine → Sediment	0.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.63%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	21.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	20.89%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.76%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	8.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.80%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	3.80%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	3.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.16%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.53%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.53%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.53%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.90%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.27%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.27%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.27%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.63%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.63%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.63%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	21.52%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	17.09%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.23%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.70%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	3.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	3.16%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	3.16%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	2.53%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.53%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.53%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.90%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	1.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.27%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.27%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.27%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.27%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.27%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.27%
Ice Edge, Mcmurdo Sound, Antarctica	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ice Edge, Mcmurdo Sound, Antarctica	1.27%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.63%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.63%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.63%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.63%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.63%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.63%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.63%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.63%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.63%
Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Marine	0.63%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.63%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.63%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.63%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.63%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.63%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.63%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.63%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000944	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY81	Host-Associated	Open in IMG/M
3300002372	Freshwater microbial communities from Lake Mendota, WI - 27SEP2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003265	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10	Environmental	Open in IMG/M
3300003621	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA	Environmental	Open in IMG/M
3300004011	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2	Environmental	Open in IMG/M
3300005824	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.180_BBC	Environmental	Open in IMG/M
3300005825	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.184_BBB	Environmental	Open in IMG/M
3300005828	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBI	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005988	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNA	Engineered	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006373	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006393	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006394	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006397	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006399	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006400	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300007217	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S10 NT17 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007242	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 C RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007250	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 B RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007614	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D1_MG	Environmental	Open in IMG/M
3300007629	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-3	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300007986	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-04	Environmental	Open in IMG/M
3300008095	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-16	Environmental	Open in IMG/M
3300008106	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-53-LTR	Environmental	Open in IMG/M
3300008264	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTR	Environmental	Open in IMG/M
3300008929	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 1A	Environmental	Open in IMG/M
3300008931	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 1C	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009141	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3	Environmental	Open in IMG/M
3300009327	Microbial communities of water from the North Atlantic ocean - ACM30	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009515	Microbial community of beach aquifer sediment core from Cape Shores, Lewes, Delaware, USA - CF-2	Environmental	Open in IMG/M
3300009543	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009608	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009728	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_213_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011012	Marine surface microbial communities from Baltic Sea. Combined Assembly of 24 SPs	Environmental	Open in IMG/M
3300012408	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA23.A_192.20151118 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012418	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012518	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012782	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA30.ICE_1m.20151125 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300012965	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300018605	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_110 - TARA_N000001754 (ERX1782444-ERR1712177)	Environmental	Open in IMG/M
3300018635	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_122 - TARA_N000001943 (ERX1782126-ERR1712207)	Environmental	Open in IMG/M
3300018723	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_046 - TARA_N000000268 (ERX1782137-ERR1712170)	Environmental	Open in IMG/M
3300018930	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001396 (ERX1782254-ERR1712008)	Environmental	Open in IMG/M
3300018942	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_128 - TARA_N000002295 (ERX1782357-ERR1712003)	Environmental	Open in IMG/M
3300019009	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_067 - TARA_N000000756 (ERX1782233-ERR1711966)	Environmental	Open in IMG/M
3300019010	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_081 - TARA_N000001428 (ERX1809462-ERR1739838)	Environmental	Open in IMG/M
3300019021	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001034 (ERX1782268-ERR1711957)	Environmental	Open in IMG/M
3300019022	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001390 (ERX1782474-ERR1712194)	Environmental	Open in IMG/M
3300019036	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001382 (ERX1782404-ERR1712086)	Environmental	Open in IMG/M
3300019037	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_068 - TARA_N000000703 (ERX1782146-ERR1712183)	Environmental	Open in IMG/M
3300019049	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_064 - TARA_N000000531 (ERX1782179-ERR1712232)	Environmental	Open in IMG/M
3300019050	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001438 (ERX1782371-ERR1711865)	Environmental	Open in IMG/M
3300019053	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_111 - TARA_N000001823 (ERX1782123-ERR1712241)	Environmental	Open in IMG/M
3300019103	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001384 (ERX1782358-ERR1712021)	Environmental	Open in IMG/M
3300019125	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_152 - TARA_N000002761 (ERX1782425-ERR1712222)	Environmental	Open in IMG/M
3300019701	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_1-2_MG	Environmental	Open in IMG/M
3300019703	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_7-8_MG	Environmental	Open in IMG/M
3300019719	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_4-5_MG	Environmental	Open in IMG/M
3300019737	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_9-10_MG	Environmental	Open in IMG/M
3300019749	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_4-5_MG	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300021169	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021266	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.458 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021267	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.489 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021273	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.386 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021275	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.429 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021278	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.302 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021282	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1035 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021293	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.589 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021298	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.460 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021305	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R868 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021317	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States ? R1088 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300022171	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022220	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_21	Environmental	Open in IMG/M
3300022366	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.437 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022372	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R8.46A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022389	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.24 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024532	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024534	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025035	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-02 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025832	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes)	Environmental	Open in IMG/M
3300025879	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025997	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-06 (SPAdes)	Environmental	Open in IMG/M
3300026131	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027186	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 (SPAdes)	Environmental	Open in IMG/M
3300027195	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3 (SPAdes)	Environmental	Open in IMG/M
3300027204	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3 (SPAdes)	Environmental	Open in IMG/M
3300027212	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 (SPAdes)	Environmental	Open in IMG/M
3300027230	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3 (SPAdes)	Environmental	Open in IMG/M
3300027243	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027553	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_04_M0_20 (SPAdes)	Environmental	Open in IMG/M
3300027673	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 B green DNA (SPAdes)	Engineered	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027837 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3	Environmental	Open in IMG/M
3300027849	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029998	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_1	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031223	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #987	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032231	Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1	Environmental	Open in IMG/M
3300032263	Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1	Environmental	Open in IMG/M
3300032272	Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrow	Environmental	Open in IMG/M
3300032373	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2	Environmental	Open in IMG/M
3300033524	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY81_100639432	3300000944	Macroalgal Surface	MSSDLKQLNKIKKNSRRTNTVQKPRLVERLIKISRVSKVTK
B570J29634_1005454	3300002372	Freshwater	MSTELKQVNKLKKTARRNDNLNDNKFIERLIKISRVTKVT
B570J40625_1009094421	3300002835	Freshwater	MSTELKQINKLKKTARRNDNVNDNKFIERLIKISRVTKVTKGGKKLS
JGI26118J46590_10094771	3300003265	Marine	MSTELKQVNKLKKTPRRNENQNDKFIERLIKISRVTKVTKGG
JGI26083J51738_100651131	3300003621	Marine	MSSELKQVNKLKKTPRRNDNRNDDKFIERLIKIGRVTKVTKGGKKLSF
Ga0055460_102715652	3300004011	Natural And Restored Wetlands	MSTDFKQVNKSKKTLQRSDILTESKLVERLIKISRVSKVTKGGKKLSFRA
Ga0074474_14080151	3300005824	Sediment (Intertidal)	MNSDLKKVNKLKRNSRPNNNAIEAKFVERLIKISRVSKVTKGG
Ga0074476_12477371	3300005825	Sediment (Intertidal)	MSIDLKQVNKVKKNFRRSEPMNEPKFIERLIKISRVSKVTK
Ga0074475_1053308926	3300005828	Sediment (Intertidal)	MSNDLKQQNKVKKNSRRTNNLQEPKFVERLIKISRVSKVTK
Ga0074470_101897751	3300005836	Sediment (Intertidal)	MSSDLKKINRKNYRPTLNLQEPKFVERLIKISRVSKVTKGGKKLS
Ga0075160_107073421	3300005988	Wastewater Effluent	MSSDLKKINKLKPNSRRKQNIQEPKLVERLIKISRVSKVTKGGKKLSFRA
Ga0075163_113999141	3300006056	Wastewater Effluent	MSSDLKQLNKLKKNSRRNNQPQEPKFVERLIKISRVSKVTKGGKKLS
Ga0075483_12072274	3300006373	Aqueous	MSTDLKQVNKFKKNPRRNQKSFEKPLVERLIQISRVSKVTKG
Ga0075517_15243371	3300006393	Aqueous	MSTDLKQVNKSKKNSKRGDNSNEPKLVERLIKIGRVSKV
Ga0075492_15329966	3300006394	Aqueous	MSTELKQVNKLKKTSRRNDNLNDAKFIERLIKISRVTKVTKGGKKLS
Ga0075488_15633612	3300006397	Aqueous	MSTDLKQVNKSKKNSQRNDSESKLAERLIKISRVSK
Ga0075495_15353652	3300006399	Aqueous	MSTELKQVNKLKKTPRRNDNRNDDKFIERLIKIGRVTKVTKGGKKIKFSCCCCNWR*
Ga0075503_10316918	3300006400	Aqueous	MSTDLKQLNKGRKNARRNNASQEPKLVERLIKISRVSKVTKGGKKIKFPSSCCSW*
Ga0075481_103001442	3300006868	Aqueous	MSTNLKQANKKTKNSRRNENFNEPKFIERLIKISRVSKVTKGGKKLSF
Ga0075477_101909061	3300006869	Aqueous	MSTNLKQANKKTKNSRRNENFNEPKFIERLIKISRVS
Ga0079268_13157632	3300007217	Marine	MSSDLKKINKKNSGRKSNSQELKLVERLIKISRVSKVTKGG
Ga0075172_15743033	3300007242	Wastewater Effluent	MSSDLKQLNKLKKNSRRNNQLQEPKFVERLIKISRVSKVTK
Ga0075165_10413892	3300007250	Wastewater Effluent	MSSDLKQLNKLKKNSRRNNQLQEPKFVERLIKISR
Ga0075165_10844681	3300007250	Wastewater Effluent	MSSDLKQLNKLKKNSRRNNQLQEPKFVERLIKISRVSKVTKGGKK
Ga0102881_10265154	3300007551	Estuarine	MSTELKQVNKLKKTPRRNGNQNDDKFVERLIKISRVTKV
Ga0102881_12088961	3300007551	Estuarine	MSTELKQVNKLKKTSRRNENINDAKFVERLIKISRVTKVTKG
Ga0102946_13884012	3300007614	Soil	MSSDLKKINKLKKNSRRNTNIQEPKFVERLIKISRV
Ga0102895_10187364	3300007629	Estuarine	MSTELKQVNKLKKTARRNDNVNDNKFIERLIKISRVTKVTKGGKKLSFVR*
Ga0102904_10115491	3300007981	Estuarine	MSTDLKQVNKVKKNPRRNERINEPRFVERLIKIGRVSKVTKGGKKL
Ga0102904_10233244	3300007981	Estuarine	MSTDLKQVNKLKKNPRRNEISNESKFVERLIKISRVSKVTKGGK
Ga0102904_11262822	3300007981	Estuarine	MSDSSTDLRKQRRAKQNSRRQPKFVERLIKISRVSKVTKGGKKLSF
Ga0100380_102829163	3300007986	Aquifer	MTSDLKKINKKSNSRRKQNIQESKLVERLIKISRVSKVTK
Ga0100392_12541673	3300008095	Aquifer	MTSDLKKINKKSNSRRKQNIQESKLVERLIKISRVSKVTKGR*
Ga0114339_10337171	3300008106	Freshwater, Plankton	MSSDLKKINKKNSRRNPNIQEPKFVERLIKISRVSKVTK
Ga0114353_100391820	3300008264	Freshwater, Plankton	MSSDLKKINKKNSRRNPNTQEPKFVERLIKISRVSKVTKGG
Ga0103732_10216773	3300008929	Ice Edge, Mcmurdo Sound, Antarctica	MNTDLKRSNKGKKNTRRNEVRFTERLIKISRVSKVTKGGKKLS
Ga0103734_10109351	3300008931	Ice Edge, Mcmurdo Sound, Antarctica	MSTNLQQLNKLKKNPRRKEKINEPKFVERLIKISRVSKVTKGGKKLSF
Ga0102829_10777883	3300009026	Estuarine	MSTDLKQINKAKKNLRRTDTVNEPKFVERLIKISRVSKVTK
Ga0102815_102121871	3300009080	Estuarine	MSTDLKQVNKSKRNSQRNDKSNELKLVERLIKIGRVSKVTKGGKKL
Ga0102815_109174181	3300009080	Estuarine	MNTDLKQVNKLKKTGRRPVRNQQPQLVERLIKISRVSKVTKGGKKLSFRA
Ga0102884_11084773	3300009141	Estuarine	MSTDLKKQGRVKRNARRQPQFVERLIKISRVSKVTKGGKKL
Ga0103843_1025541	3300009327	River Water	MSTDLKQVNKFKKNTRRVDTRNEPKFVERLIKISRVSKVTKG*
Ga0114998_101086224	3300009422	Marine	MSTDLKQVNKSKKNSRRTDDRNEQKFVERLIKISRV
Ga0115005_100770816	3300009432	Marine	MNTDLKQVNKAKKNVRRNDKRTEVKFAERLIKISRVSKVTKGGK
Ga0115008_106441241	3300009436	Marine	MSTDLKKVNKQNTRRNDNDPKFVERLIKISRVSKVTKGGKKLSFR
Ga0129286_101902661	3300009515	Sediment	MNSDLKKINKARKNSRSNANVNKSRFVERLIKINRVSKVTKGGKKLSF
Ga0115099_106605833	3300009543	Marine	MNTDLQQVNKVKKKSRRNENRNETKFSERLIKISRVSKVTKG
Ga0115101_16907051	3300009592	Marine	MSTELKQVNKLKKTQRRNEHGNDAKFIERLIKISRVTKVTKGGKKMSFR
Ga0115102_109206521	3300009606	Marine	MSNDLKKINKKRNSRRNTNIQEPKFVERLIKISRVSKVTKGGKKLSF
Ga0115100_104648322	3300009608	Marine	MSTNLKQANKLKKNSRRNDNRNEPKFVERLIKISRVSKVTKGGKN*
Ga0115100_106126781	3300009608	Marine	MSSDLKQLNKFKKNSRRTNNIREPKLVERLIKISRVSKVTKG
Ga0115104_1018491714	3300009677	Marine	MSTDLKEVNKGKKAPRRNNRPREKQLVERLVQISRVSK*
Ga0123371_1288783	3300009728	Marine	MSTDPKQVNKIKKNSRRVENNTEPKFIERLIKISRVSKVTKGGKK
Ga0116226_118550851	3300009787	Host-Associated	MSNDLKKINKLKKNSRRTNNVPESKFVERLIKISRVSKVTK
Ga0129336_100885273	3300010370	Freshwater To Marine Saline Gradient	MNNLKIRNSMSTDLKQVNKLRKTPRRTENQNDAKFFERLIKISRVTKVTKGGKK*
Ga0150979_14633431	3300011012	Marine	MSTDLREANKAKKNPRRNNPLPKSKFVERLIKISRVSKVTKGGKKL
Ga0138265_12593393	3300012408	Polar Marine	MSTELKQVNKLKKTSRRNESLHDTKFVERLIKISRVTKVTKGGKK*
Ga0138265_131400714	3300012408	Polar Marine	MSTELKQVNKLKKTSRRKENPNDIKFVERLIKISRVTKVTKGGKKLKFSRRCCYR*
Ga0138265_14476732	3300012408	Polar Marine	MSTDLKRVKKNSRNKPKFVERLIKISRVSKVTKGGK
Ga0138261_125792920	3300012418	Polar Marine	MSTDLKEVNKGKKNPRRNTRPREKQLVERLVQISRVSKVTKGGKK
Ga0129349_11655421	3300012518	Aqueous	MSTDLKQVNKSKRNSQRNDNSNEFRLVERLIKIGRVSKVTKGGKKLSF
Ga0129331_146554610	3300012524	Aqueous	MSTDLKQVNKLKKNPRRNEKNNEPRFVERLIKIGR
Ga0138268_158891017	3300012782	Polar Marine	MSSNIKKINKKNSRPSAQEPMFVERLIKISRVSKVTKG
Ga0163110_108093882	3300012928	Surface Seawater	MSNNLKKINKKNSWRNRTVQEPKLTERLIKISRVSKVTKGGKKLSFR
Ga0163111_104399581	3300012954	Surface Seawater	MANELKEVNKNKKNGRRSYKSNEPKFLERLIKISRVSKVTKG
Ga0129346_10327541	3300012965	Aqueous	MNTDLKQVNKLKKNSRRNDTKNDQKFVERLIKISRVCKVTKGGKKLSF
Ga0181385_11983692	3300017764	Seawater	MSTELKQVNKLKKTSRRNENINDAKFVERLIKISRVTKVTKGGKKL
Ga0193339_10021091	3300018605	Marine	MSTDLKKISRVKKNSRNKPKLVERLIKISRVSKVT
Ga0193376_10011054	3300018635	Marine	MSTKLKQVNKLKKIQRSNEHGNNTKFIERLIKISRVTKVTKGGKKMS
Ga0193038_10616802	3300018723	Marine	MSTDLKQANKPKKNSRRNENFNEPKFIERLIKISRVSKVTKGG
Ga0192955_100129201	3300018930	Marine	MSNDLKEVNKLKKNSRRLENTNEPKFVERLIKISRVSKVTKGGKKLSFRSI
Ga0192955_100218801	3300018930	Marine	MSTDLKRVKKNSRNKPKFVERLIKISRVSKVTKGGKKL
Ga0192955_100582423	3300018930	Marine	MSTNLKQLNKPKKHDQFNESSNKPELVERLIKISRVSKVTKGGKKLSFR
Ga0192955_101832252	3300018930	Marine	MSTELKQVNKLKKTFRRNENLNDNKFIERLIKISRVTKVTKGGK
Ga0193426_1000015511	3300018942	Marine	MSTELKQVNKLKKTSRRNENLNDNKFIERLIKISRVTKV
Ga0192880_100004905	3300019009	Marine	MSTDLKKISRVKKNSRNKPKFVERLIKISRVSKVTKGGKKIKFPCNCCYW
Ga0193044_100243245	3300019010	Marine	MSTDLKKVNKKNTRRNDNNSKFVERLIKISRVSKVT
Ga0193044_100640601	3300019010	Marine	MSTNLKQLNKPKKHDQFNKLSNKPELVERLIKISRVSKVTKG
Ga0192982_100015907	3300019021	Marine	MSTELKRVNKLKKTSRRNGNLHDPKFVERLIKISRVTKVTKGRKKMSFRAVV
Ga0192982_100407051	3300019021	Marine	MSNNLKKINKKNSWRNRAVQEPKLTERLIKISRVSKVTKGG
Ga0192951_100198284	3300019022	Marine	MNTDSKRINKGKKNARRNEVRFTERLIKISRVSKVTKGGK
Ga0192945_102708412	3300019036	Marine	MSTDLKKISRVKKNSRNKPKFVERLIKISRVSKVTK
Ga0192886_100845701	3300019037	Marine	MSTNLKQLNKPKKHDQFNKLSNKPELVERLIKISRVSKVT
Ga0193082_100058115	3300019049	Marine	MSTSLKQVNKQKKSLRRNDNRNEQKFVERLIKISRVSKVTKK
Ga0192966_100569411	3300019050	Marine	MTNDLKKINKKRSSRRNLSSYEPKLVERLIKISRVS
Ga0193356_102943991	3300019053	Marine	MSSTLKKANKFKKNSRRVANLQEPKLVERLIKISRVSKVTKGG
Ga0192946_10022221	3300019103	Marine	MSTDLKKISRVKKNSRNKPKFAERLIKISRVSKVTKGGKKLSFR
Ga0193104_10024411	3300019125	Marine	MASDLKKINKLRKNSRRLNNIQEPKLVERLIKISRVSKVTKGGKKL
Ga0194015_10104633	3300019701	Sediment	MSTELKQINKLKKSRRNENLNDAKFIERLIKISRVTKVTK
Ga0194021_10350252	3300019703	Sediment	MSTELKQVNKLKKTPRRNENQNDKFIERLIKISRVTKVT
Ga0193977_10341441	3300019719	Sediment	MSAELKQVNKLKKTSRRNENLNDTKFIERLIKISRVTKVTKGGKK
Ga0193973_10278102	3300019737	Sediment	MSTDLKQVNKSKRNSQRNDNSKELKLVERLIKIGR
Ga0193983_10646951	3300019749	Sediment	MSTDLKQVNKLKKTPRRNEISNEPKFVERLIKISRVSKVTKGGKKLSF
Ga0194110_107642382	3300020084	Freshwater Lake	MSTELKQINKLKKTARRNDNVNDNKFIERLIKISRVT
Ga0211735_1042982019	3300020162	Freshwater	MSSDLKQVNKLKKNTRRNNTIQEPKLVERLIKISRVSKVTKGGKKTKF
Ga0206687_10866932	3300021169	Seawater	MSSTLKKANKFKKNSRRVANLQEPKLVERLIKISRVSKVTKGGKK
Ga0206687_11919563	3300021169	Seawater	MSTDLKQINKVKKNPRSNNSNNEPKFVERLIKISRVSKVTKGGKKLSF
Ga0206687_18979781	3300021169	Seawater	MSTDLKQVNKLKKNSRRNDNRNEPKFVERLIKISRVSKVTKGG
Ga0210348_1502866	3300021266	Estuarine	MSSDLKKLNRLKKNSRRVQEPKLVERLIKISRVSKVTKG
Ga0210353_1254272	3300021267	Estuarine	MSSDLKQLNKGKKNSRRSTNLQEPKFVERLIKISRVSKVTKGGKN
Ga0210340_10502163	3300021273	Estuarine	MSSDLKKINKKNSRPTLNSQEPKFVERLIKISRVSKVTKGGKN
Ga0210342_1477952	3300021275	Estuarine	MSSDLKKLNKLKKNSRRVQEPKLVERLIKISRVSKVTKG
Ga0210332_1316061	3300021278	Estuarine	MTSDLKKINKKPNFRRKQNIQEPKLVERLIKISRV
Ga0210303_10337783	3300021282	Estuarine	MSSDLKQLNKLKKNSRRNNQPQEPKFVERLIKISRVSKVTKGGKKIKFPCDCCTW
Ga0210303_10634273	3300021282	Estuarine	MSTELKQINKLKKTARRNDNVNDNKFIERLIKISRVTKVTKGGKK
Ga0210358_1784541	3300021293	Estuarine	MSTDLKQINKAKKNLRRTDTVNEPKFVERLIKISRVSKVTKG
Ga0210349_11437553	3300021298	Estuarine	MSSDLKKINKKKNFRRNLNAQEPKLVERLIKISRVSKVTKGGKKIEF
Ga0210296_107665011	3300021305	Estuarine	MSTELKQVNKLKKTSRRNENLNDKFIERLIKISRVTKVTKGGKKIKFSCGSCYR
Ga0210309_10505187	3300021317	Estuarine	MSTELKQVNKLKKTSRRNTNLNDAKFIERLIKISRVTKVTKGGKN
Ga0210362_13532213	3300021329	Estuarine	MTSDLKQLNKVKKNSRRGNNLQEPKFIERLIKISRVSKVTKGG
Ga0213858_102006991	3300021356	Seawater	MSTDLKQVNKFKKNSRRFDNGNEPKFVERLIKISRVTKVTK
Ga0213859_100401782	3300021364	Seawater	MSTDLKQVNKKNTRRNDNDTKFVERLIKISRVSKVTKGGK
Ga0213864_100397451	3300021379	Seawater	MSTDLKQVNKSKKTSQRNDNSTESKFVERLIKISRVSKVTKGG
Ga0213857_10137193	3300022171	Watersheds	MSSDLKKVNKLKKNSRRNNNVQEPKFVERLIKISRVSKVTKGGKKIKFSSDCSNW
Ga0224513_103267132	3300022220	Sediment	MSTELKQVNKLKKTSRRNENLNDKFIERLIKISRVTKVTKGGKKLS
Ga0210344_1005971	3300022366	Estuarine	MSSDLKKINKKSSRRMANVQEPKFVERLIKISRVSKVTKGG
Ga0210293_1144231	3300022372	Estuarine	MSTDLKQLNKGRKNGRRNDASQEPKLVERLIKISRVSKVTKGGKK
Ga0210318_11580201	3300022389	Estuarine	MTSDLKKINKKPNSRRKQNIQEPKLVERLIKISRVSKVTK
Ga0210003_12461273	3300024262	Deep Subsurface	MSTDLKQVNKLKKNSRRPDNREPKLVERLIKISRV
Ga0244775_115560311	3300024346	Estuarine	MSTELKQVNKLKKTPRRNENLNDTKFIERLIKISRVTKVTKGGKKLSFR
Ga0244776_109638262	3300024348	Estuarine	MSTDLKQVNKFKKNSRRNDNRNEQKFVERLIKISRVSIVTKGG
Ga0256352_10075085	3300024532	Freshwater	MINTDIKQVNKLKKIPRTNENLNELRLVERLIKISRVSKVTKGGKKL
Ga0256357_10626081	3300024534	Freshwater	MINTDIKQVNKLKKIPRTNENLNELRLVERLIKISRVSKVTKGGKKLSF
Ga0210011_10459931	3300025035	Aquifer	MTSDLKKINKKSNSRRKQNIQESKLVERLIKISRVSKVTKGG
Ga0209194_11163173	3300025632	Pelagic Marine	MSTELKQVNKLKKTSRRNDNLNDAKFIERLIKISRV
Ga0208150_11972991	3300025751	Aqueous	MSTDLTQVNKLKKNPRRNERNNEPKFVERLIKIGRVSKVT
Ga0209307_10389183	3300025832	Pelagic Marine	MSTDLKQVNKSKKNSKRGDNSNEPKLVERLIKIGRVSKVTKGEKVKFPCYCCCRR
Ga0209555_101877121	3300025879	Marine	MSTDLKQVNKLKKNSRRTDQKNDQKFVERLIKISRVSKVTKGG
Ga0208916_102750171	3300025896	Aqueous	MTSDLKKINKLKPNSRRKQNTQEPKLVERLIKISRVSKVTKGG
Ga0210013_10546463	3300025997	Aquifer	MSTDLKRVNKKNSRRSGTAQEPKFVERLIKISRVSKVTKGGKKL
Ga0209928_10367763	3300026131	Soil	MSTELKQVNKLKKTSRRNENVNDATFIERLIKISRVTKVTK
Ga0209951_11024881	3300026138	Pond Water	MSTELKQVNKVKRTSRRNENLSDAKFIERLIKISRVTKVTKGGKKLSFR
Ga0208797_10431182	3300027186	Estuarine	MSTELKQVNKLKKTSRRNTNLNDAKFIERLIKISRVTK
Ga0208676_10133131	3300027195	Estuarine	MSTELKQVNKLKKTSRRNDNLNDNKFIERLIKISRVTKVTKGGKK
Ga0208924_1081801	3300027204	Estuarine	MSTELKQVNKLKKTSRRNDNLNDNKFIERLIKISR
Ga0208554_10509413	3300027212	Estuarine	MSTELKQVNKLKKTPRRNDNRNDDKFIERLIKIGRV
Ga0208171_10157062	3300027230	Estuarine	MSTDLKKQGRVKRNARRQPQFVERLIKISRVSKVTKG
Ga0208174_10029765	3300027243	Estuarine	MSTSLKQVNKPKKNVRRNDNRNEPKFAERLIKISRVSKVTKGGKKLSF
Ga0208174_10331601	3300027243	Estuarine	MSTDLKQLNKGRKNGRRNDASQEPKLVERLIKISRVSKVTKGGKKLS
Ga0208923_10920602	3300027320	Estuarine	MSTELKQINKLKKTARRNDNVNDNKFIERLIKISRVTKVTKGGKKL
Ga0209968_10970121	3300027526	Arabidopsis Thaliana Rhizosphere	MNSDLKKINKVKKNSRSNANFNKPRFVERLIKINRVSKV
Ga0208947_11200591	3300027553	Marine	MSTDLKQVNKLKKNSRRFDKENDPKFVERLIKISRVSKV
Ga0209278_12472542	3300027673	Wastewater Effluent	MTSDLKRINKKPNSRRKQNTQEPKLVERLIKISRVSK
Ga0209090_103350803	3300027813	Marine	MDTDLKRINKGKKNTRRNEVRFTERLIKISRVSKVTKGGK
(restricted) Ga0255041_104092551	3300027837	Seawater	MSTDLKQVNKKKTSRRPDNRNDQKFVERLIKIGRVSKVT
Ga0209712_102059263	3300027849	Marine	MSNDLKKINKKRNSRRNNNLQEPKFVERLIKISRVSKVTKGG
Ga0209712_108204941	3300027849	Marine	MSSDLKKINRKNSRRTSNTQEPKLVERLIKISRVSKVT
Ga0209404_100611145	3300027906	Marine	MNTDLKQVNKLKKNPRRNERNNEPRFVERLIKIGRV
Ga0302271_102022143	3300029998	Bog	MSNDLKKINKLKKNSRRPNNLTEPKFVERLIKISRVSKVTKGGKKL
Ga0311349_119892222	3300030294	Fen	MSNDLKKINKLKKNSRRPNNLTEPKFVERLIKISRVSKVTKGGKKLS
Ga0307981_11103703	3300031223	Saline Water	MTSELKNVNKSKKNFRRSNLAQEPKLMERLIKISRVSKV
Ga0310813_104836801	3300031716	Soil	MSSDLKKINKKKNSRRNLSVQEPKLVERLIKISRVSKVTKG
Ga0316187_111225062	3300032231	Worm Burrow	MSSDLKQLNKGKKNSRRSKNLQEPKFVERLIKISRVSKVTKGGKK
Ga0316195_102075411	3300032263	Sediment	MNTDLKKINKSKKNSRTNRNVPQTKFVERLIKISRVS
Ga0316189_102097735	3300032272	Worm Burrow	MSSDLKQLNKVKKNSRRGNNLQEPKFVERLIKISRVSKVTKGGKKLSFR
Ga0316189_107826612	3300032272	Worm Burrow	MTSDLKKINKQKPNSRRKQNFQEPRLVERLIKISRVSKVTKGGKKLS
Ga0316204_106779641	3300032373	Microbial Mat	MSNDLKKINKKNSRRINNSQEPKFVERLIKISRVSKVTKGGKKL
Ga0316592_10111964	3300033524	Rhizosphere	MSSDLKKINKKKNSRRNLNNQEPKLVERLIKISRVSKVTKGGKKN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters