Metagenome / Metatranscriptome Family F042044

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	78 residues
Representative Sequence	SAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSIDAIGGSAAYPMFERLATKMRAQV
Number of Associated Samples	124
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.14 %
% of genes near scaffold ends (potentially truncated)	92.45 %
% of genes from short scaffolds (< 2000 bps)	93.08 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.503 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.157 % of family members)
Environment Ontology (ENVO)	Unclassified (30.189 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.522 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.40% β-sheet: 0.00% Coil/Unstructured: 39.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
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SCOP family	SCOP domain	Representative PDB	TM-score
a.100.1.8: Conserved hypothetical protein MTH1747	d1i36a1	1i36	0.67038
a.45.1.0: automated matches	d2hnla2	2hnl	0.65062
a.45.1.1: Glutathione S-transferase (GST), C-terminal domain	d1v2aa1	1v2a	0.64693
a.45.1.0: automated matches	d4zbda2	4zbd	0.63513
a.100.1.0: automated matches	d3g0oa2	3g0o	0.63149

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF01812	5-FTHF_cyc-lig	5.03
PF00196	GerE	4.40
PF06262	Zincin_1	4.40
PF06772	LtrA	3.14
PF08264	Anticodon_1	2.52
PF12680	SnoaL_2	2.52
PF13472	Lipase_GDSL_2	2.52
PF00067	p450	2.52
PF01625	PMSR	2.52
PF00326	Peptidase_S9	1.26
PF03988	DUF347	1.26
PF00406	ADK	1.26
PF00296	Bac_luciferase	1.26
PF14376	Haem_bd	1.26
PF01494	FAD_binding_3	1.26
PF13460	NAD_binding_10	1.26
PF02627	CMD	1.26
PF00144	Beta-lactamase	0.63
PF03023	MurJ	0.63
PF00248	Aldo_ket_red	0.63
PF06745	ATPase	0.63
PF02887	PK_C	0.63
PF07676	PD40	0.63
PF08352	oligo_HPY	0.63
PF13649	Methyltransf_25	0.63
PF07690	MFS_1	0.63
PF02467	Whib	0.63
PF02577	BFN_dom	0.63
PF13378	MR_MLE_C	0.63
PF07366	SnoaL	0.63
PF03625	DUF302	0.63
PF00543	P-II	0.63
PF04237	YjbR	0.63
PF12679	ABC2_membrane_2	0.63
PF00288	GHMP_kinases_N	0.63
PF00355	Rieske	0.63
PF13419	HAD_2	0.63
PF01471	PG_binding_1	0.63
PF01323	DSBA	0.63
PF01609	DDE_Tnp_1	0.63
PF00596	Aldolase_II	0.63
PF01243	Putative_PNPOx	0.63
PF13602	ADH_zinc_N_2	0.63
PF00440	TetR_N	0.63
PF01979	Amidohydro_1	0.63
PF02909	TetR_C_1	0.63
PF03795	YCII	0.63
PF09334	tRNA-synt_1g	0.63
PF12847	Methyltransf_18	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	5.03
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	4.40
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	3.14
COG2124	Cytochrome P450	Defense mechanisms [V]	2.52
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	2.52
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	2.52
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.26
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.26
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.26
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.26
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.26
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.26
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	1.26
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	1.26
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.63
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.63
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.63
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.63
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.63
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.63
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.63
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.63
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.63
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.63
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.63
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.63
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.63
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.63
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	0.63
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	0.63
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.63
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.63
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.63
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	0.63
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.63
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.63
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.13 %
Unclassified	root	N/A	18.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.50 %
Unclassified	root	N/A	18.87 %
Viruses	superkingdom	All Organisms → Viruses	0.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.50 %
Unclassified	root	N/A	18.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.47 %
Unclassified	root	N/A	18.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.33 %
Unclassified	root	N/A	18.87 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	59.12 %
Unclassified	root	N/A	18.87 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.52 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1.26 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	43.40 %
Unclassified	root	N/A	18.87 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.52 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.52 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.26 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.26 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.63 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.63 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.63 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.40 %
Unclassified	root	N/A	18.87 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.52 %
Microthrixaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae	1.26 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.26 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.26 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	1.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.26 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.63 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.63 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.40 %
Unclassified	root	N/A	18.87 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.52 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	1.26 %
Candidatus Microthrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix	1.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.26 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.63 %
Ferrithrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix	0.63 %
Acidiferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium	0.63 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.63 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.63 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.40 %
Unclassified	root	N/A	18.87 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.52 %
Candidatus Microthrix parvicella	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	1.26 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	1.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.26 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.63 %
unclassified Acidiferrimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium	0.63 %
Ferrithrix thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix → Ferrithrix thermotolerans	0.63 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.63 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.63 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	43.40 %
Unclassified	root	N/A	18.87 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.52 %
Ktedonobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	1.26 %
Candidatus Microthrix parvicella	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	1.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.26 %
Ferrithrix thermotolerans DSM 19514	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix → Ferrithrix thermotolerans → Ferrithrix thermotolerans DSM 19514	0.63 %
Streptomyces sp. ADI93-02	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI93-02	0.63 %
Acidiferrimicrobium sp. IK	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	0.63 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.63 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.63 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001632\|JGI20235J16296_1006317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300003505\|JGIcombinedJ51221_10134094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	997	Open in IMG/M
3300004092\|Ga0062389_102272430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300004092\|Ga0062389_103406757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300004092\|Ga0062389_103606302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300004114\|Ga0062593_102208331	Not Available	617	Open in IMG/M
3300004121\|Ga0058882_1815723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005186\|Ga0066676_10679857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300005329\|Ga0070683_102449877	Not Available	500	Open in IMG/M
3300005332\|Ga0066388_103963007	Not Available	755	Open in IMG/M
3300005332\|Ga0066388_107713227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	539	Open in IMG/M
3300005337\|Ga0070682_100390815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300005364\|Ga0070673_101384885	Not Available	662	Open in IMG/M
3300005365\|Ga0070688_100880399	Not Available	705	Open in IMG/M
3300005435\|Ga0070714_101382778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300005435\|Ga0070714_101627931	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300005436\|Ga0070713_101698522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300005467\|Ga0070706_101536369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300005524\|Ga0070737_10177624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	895	Open in IMG/M
3300005532\|Ga0070739_10181088	Not Available	1090	Open in IMG/M
3300005537\|Ga0070730_10108735	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300005538\|Ga0070731_10648901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300005544\|Ga0070686_101135305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	647	Open in IMG/M
3300005591\|Ga0070761_10167018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1293	Open in IMG/M
3300005602\|Ga0070762_10585806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300005712\|Ga0070764_10965460	Not Available	536	Open in IMG/M
3300005719\|Ga0068861_102457487	Not Available	524	Open in IMG/M
3300005764\|Ga0066903_100017073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7484	Open in IMG/M
3300005921\|Ga0070766_10409206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300006028\|Ga0070717_11811215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006163\|Ga0070715_10440337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300006176\|Ga0070765_100021544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4835	Open in IMG/M
3300006176\|Ga0070765_100218840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1735	Open in IMG/M
3300006871\|Ga0075434_100265059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1737	Open in IMG/M
3300006893\|Ga0073928_10949786	Not Available	587	Open in IMG/M
3300009545\|Ga0105237_11587133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300009553\|Ga0105249_11758699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	692	Open in IMG/M
3300010048\|Ga0126373_10015527	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6306	Open in IMG/M
3300010048\|Ga0126373_11285209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	798	Open in IMG/M
3300010048\|Ga0126373_11424490	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300010048\|Ga0126373_12283798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300010366\|Ga0126379_10767052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix → Ferrithrix thermotolerans → Ferrithrix thermotolerans DSM 19514	1062	Open in IMG/M
3300010379\|Ga0136449_103648834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300010869\|Ga0126359_1074230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300012469\|Ga0150984_115014724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300012909\|Ga0157290_10460189	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300012955\|Ga0164298_11226211	Not Available	570	Open in IMG/M
3300012989\|Ga0164305_11777602	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300016341\|Ga0182035_11941507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300017970\|Ga0187783_11236413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300017972\|Ga0187781_10879535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300020581\|Ga0210399_10070042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2839	Open in IMG/M
3300020582\|Ga0210395_10689892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300020582\|Ga0210395_11185946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300020583\|Ga0210401_10752500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300021088\|Ga0210404_10084584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1570	Open in IMG/M
3300021171\|Ga0210405_10196686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1598	Open in IMG/M
3300021171\|Ga0210405_10432495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1035	Open in IMG/M
3300021180\|Ga0210396_10108703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2506	Open in IMG/M
3300021180\|Ga0210396_11547195	Not Available	543	Open in IMG/M
3300021401\|Ga0210393_10242173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1462	Open in IMG/M
3300021402\|Ga0210385_10051467	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300021402\|Ga0210385_10121357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1845	Open in IMG/M
3300021402\|Ga0210385_11577229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300021403\|Ga0210397_10115726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1831	Open in IMG/M
3300021403\|Ga0210397_10442248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300021404\|Ga0210389_10270330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1331	Open in IMG/M
3300021405\|Ga0210387_10663524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300021405\|Ga0210387_11414653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300021406\|Ga0210386_11042774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300021406\|Ga0210386_11771545	Not Available	509	Open in IMG/M
3300021407\|Ga0210383_10110670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2316	Open in IMG/M
3300021407\|Ga0210383_10176835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI93-02	1820	Open in IMG/M
3300021407\|Ga0210383_11092939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	673	Open in IMG/M
3300021420\|Ga0210394_11650492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300021433\|Ga0210391_10294931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1273	Open in IMG/M
3300021474\|Ga0210390_10903598	Not Available	726	Open in IMG/M
3300021474\|Ga0210390_11354367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300021477\|Ga0210398_10243711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1464	Open in IMG/M
3300021560\|Ga0126371_11101032	Not Available	933	Open in IMG/M
3300021560\|Ga0126371_12202992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300021560\|Ga0126371_13386552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300022525\|Ga0242656_1050335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300022529\|Ga0242668_1152752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300022712\|Ga0242653_1081701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300022724\|Ga0242665_10090961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300024176\|Ga0224565_1026851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300025588\|Ga0208586_1073447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300025627\|Ga0208220_1192719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300025633\|Ga0208480_1017763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2163	Open in IMG/M
3300025634\|Ga0208589_1100564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	681	Open in IMG/M
3300025914\|Ga0207671_10890273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300025921\|Ga0207652_10599795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	988	Open in IMG/M
3300025921\|Ga0207652_11463008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300025939\|Ga0207665_11468141	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300025944\|Ga0207661_10869812	Not Available	830	Open in IMG/M
3300025949\|Ga0207667_11589847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300025961\|Ga0207712_11619569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	580	Open in IMG/M
3300026118\|Ga0207675_100885528	Not Available	908	Open in IMG/M
3300026142\|Ga0207698_12689730	Not Available	506	Open in IMG/M
3300027096\|Ga0208099_1047351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300027575\|Ga0209525_1132299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300027652\|Ga0209007_1094255	Not Available	753	Open in IMG/M
3300027773\|Ga0209810_1224282	Not Available	735	Open in IMG/M
3300027853\|Ga0209274_10221528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300027879\|Ga0209169_10280373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300027884\|Ga0209275_10050333	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300027884\|Ga0209275_10403961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300027889\|Ga0209380_10602115	Not Available	636	Open in IMG/M
3300027895\|Ga0209624_10265039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1143	Open in IMG/M
3300027895\|Ga0209624_11048263	Not Available	527	Open in IMG/M
3300027908\|Ga0209006_10503778	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300027908\|Ga0209006_11334571	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300028379\|Ga0268266_10295889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1509	Open in IMG/M
3300028754\|Ga0307297_10298368	Not Available	582	Open in IMG/M
3300028879\|Ga0302229_10361739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300028906\|Ga0308309_10958974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300029701\|Ga0222748_1071601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	631	Open in IMG/M
3300029951\|Ga0311371_10305882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2238	Open in IMG/M
3300029999\|Ga0311339_10904700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300029999\|Ga0311339_11762284	Not Available	540	Open in IMG/M
3300030007\|Ga0311338_11275119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300030007\|Ga0311338_11479738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300030503\|Ga0311370_10502480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1485	Open in IMG/M
3300030617\|Ga0311356_11998302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300031027\|Ga0302308_10279277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300031090\|Ga0265760_10106183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300031090\|Ga0265760_10123637	Not Available	832	Open in IMG/M
3300031231\|Ga0170824_103707419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300031234\|Ga0302325_12812881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300031344\|Ga0265316_11040270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300031525\|Ga0302326_13431795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300031544\|Ga0318534_10334220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300031640\|Ga0318555_10165899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300031668\|Ga0318542_10717505	Not Available	523	Open in IMG/M
3300031682\|Ga0318560_10549077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300031708\|Ga0310686_101925640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1182	Open in IMG/M
3300031708\|Ga0310686_103763637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300031708\|Ga0310686_103926732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300031708\|Ga0310686_107229515	Not Available	578	Open in IMG/M
3300031708\|Ga0310686_108165166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2479	Open in IMG/M
3300031708\|Ga0310686_114087237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300031715\|Ga0307476_11276661	Not Available	536	Open in IMG/M
3300031718\|Ga0307474_10424195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1037	Open in IMG/M
3300031764\|Ga0318535_10559582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300031768\|Ga0318509_10443389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300031798\|Ga0318523_10292141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300031823\|Ga0307478_10389725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152	Open in IMG/M
3300031912\|Ga0306921_11651255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	695	Open in IMG/M
3300031996\|Ga0308176_12133850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300031996\|Ga0308176_12380181	Not Available	565	Open in IMG/M
3300032001\|Ga0306922_12325588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300032076\|Ga0306924_11989654	Not Available	599	Open in IMG/M
3300032180\|Ga0307471_100334516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1618	Open in IMG/M
3300032782\|Ga0335082_11693146	Not Available	506	Open in IMG/M
3300032805\|Ga0335078_10703765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1251	Open in IMG/M
3300032828\|Ga0335080_11598925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300033134\|Ga0335073_10426664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1541	Open in IMG/M
3300033134\|Ga0335073_10861954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	961	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.82%
Host-Associated	Host-Associated	8.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.31%
Plants	Host-Associated → Plants	8.18%
Aquatic	Environmental → Aquatic	2.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.76%
Peat	Environmental → Terrestrial → Peat	6.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Freshwater	Environmental → Aquatic → Freshwater	1.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.83%
Loam	Environmental → Terrestrial → Soil → Loam	24.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.14%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.14%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.26%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.63%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.63%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001632	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20235J16296_10063172	3300001632	Forest Soil	AENSVQAFVLYRELDYFEQLGALEKHGGVDFEMIKTLLGRRLIDRWELWQPTIDAMGGGDIYPMFDRLVTKMRAVV*
JGIcombinedJ51221_101340941	3300003505	Forest Soil	AYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLATKMRAQV*
Ga0062389_1022724301	3300004092	Bog Forest Soil	QAEMAAEFFRRWSESPMVETRRLVAQFETPEALRDAMVRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIKSLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLATKMRAQG*
Ga0062389_1034067571	3300004092	Bog Forest Soil	AVEFIRRWNEESLVEARHLVAQFQTPQALRDAMKRFIAENSVQAYVLYRELDYFEQLGALEKHGGVDFEMIRTLLGRRLIDRWELWQPTIDAIGGGQTYPMFDRLVTKMRAAV*
Ga0062389_1036063021	3300004092	Bog Forest Soil	QAEMAAEFFRRWSESPMVETRRFVAQFETPEALRDAMTRYIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRQLIDRWEMWQPSIDAIGGSAAYPMFERLVTKMRAQV*
Ga0062593_1022083311	3300004114	Soil	DYFEQLGALEEHGGLDFGLVRMMLGQRLVERWELWAPSIEAIGGADVYPMFTRLAGKMRAAAGAPR*
Ga0058882_18157231	3300004121	Forest Soil	EARRLVAEYQTPQALADAMTRFIAENSVHAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLTDRWEMWQPSIDAIGGSATYPMFERLATKMRAQL*
Ga0066676_106798571	3300005186	Soil	AANDSEAYVLYREPDYFEQLGALEEHGGFDFDLIQAMLGRRLVDRWQLWAPSIEAMGGDAVYPMFAHLARKMELATAKR*
Ga0070683_1024498772	3300005329	Corn Rhizosphere	FRELDYFEQLGAIEEHGGFDFGLIRSLLGQKLVDRFDLWQPSIEAIGGREVYPNFTQLAEKMRAAVP*
Ga0066388_1039630071	3300005332	Tropical Forest Soil	RELDYFEQLGALEEHGGLDFGLVRTMLGRRLVDRWELWAPSIEAIGGVDVYPMFTRLAEKMRAATRA*
Ga0066388_1077132271	3300005332	Tropical Forest Soil	FEQLGALEKHGGFDFELIKTLLGRRLIDRWEMWQPAIDAIGGKDAYPMFDRLVTKMRAAV
Ga0070682_1003908151	3300005337	Corn Rhizosphere	VGFIAENSVHAYVLYRELDYFEQLGALEEYGGFDLKLVELLLGRRLIERWELWKPSIDALGGASTYPMFERLVDKMRMLV*
Ga0070673_1013848851	3300005364	Switchgrass Rhizosphere	DVEAYVLFRELDYFEQLGAMEEHGGFDFGLIQTLLGPKLVERWDLWRPSIDAIGGRSVYPNFTQLAEKMRVAVA*
Ga0070688_1008803992	3300005365	Switchgrass Rhizosphere	DYFEQLGALEDHGGVHFGLIRTMLGRRLVDRYELWEPSITALGGRDVYPMFTQLADKMRSATQP*
Ga0070714_1013827781	3300005435	Agricultural Soil	VAANDTEAYVLFRELDYFEQLGAMEQHGGFDFELVRLLLGHRLIDRWELWRPSIDALGGPQVYPLFDHLARKMQQALAAG*
Ga0070714_1016279311	3300005435	Agricultural Soil	RELDYFEQLGALEKHGGFDFELIRTLLGRRLIDRWDLWQPSIEALGGTATYPMFERLVTKMRAAL*
Ga0070713_1016985222	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PMVETRRLVAELGTPEALRDAMTLFIAENSADAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLIDRWDLWQPSIEALGGTATYPMFERLVTKMRAAL*
Ga0070706_1015363691	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	QNAAEAYVLYRELDYFEQLGALEEHGGFDFDLIRALLGHRLIDRWEMWQPTIDAIGGSATYPMFERLVAKMRGELSQREIR*
Ga0070737_101776241	3300005524	Surface Soil	LGALELHGAFDFELIRTMLGHRLIDRWEMWEPSIDAIGGRAAYPMFANLVTKMRAVGA*
Ga0070739_101810882	3300005532	Surface Soil	ENAREAYVLFRELDFFEQLGALEAHGGFDFELIRTLLGPRLVERWDLWQPSVEALGGPDVYPMFARLAEKMRAALAA*
Ga0070730_101087353	3300005537	Surface Soil	MHLRFGGFDLQLIRLLLGPRLIARWEMWYPSIEAIARVAAYPTFEGLVTKMRAALAT
Ga0070731_106489011	3300005538	Surface Soil	TSEALRSALERLIAERSVDAYVLYRELDYFEQLGALEQHGGFDFDLIRALLGPRLIDRWEMWQPAIEAIWGTGAYPMFEALVAKMRAALAASTQGGSRGAPGA*
Ga0070686_1011353051	3300005544	Switchgrass Rhizosphere	YVLFRELDYFEQLGAMEQHGGFDFELVRLLLGHRLIDRWELWRPSIDALGGPQVYPLFDHLARKMQQALAAG*
Ga0070761_101670185	3300005591	Soil	AQALRDAMTRFIAENSVQAYVLYRELDYFEQLGALEKHGGFDFELIKTLLGRHLIDRWEMWQPTIEAIGGRDAYPMFDRLVAKMRAAV*
Ga0070762_105858061	3300005602	Soil	ELDYFEQLGALEQHGGFDFDLIKSLLGRRLVDRWEMWQPSIDAMGGRTVYPLFDGLVTKMRAVL*
Ga0070764_109654601	3300005712	Soil	YRELDYFEQLGALERHGGFDFELIKTLLGGRLIDRWEMWQPSIEAIGGTATYPMFDRLVAKMRAAEL*
Ga0068861_1024574872	3300005719	Switchgrass Rhizosphere	EAFVLFRELDYFEQLGAMEEHGGFDFGLIEALLGQKLVDRFDLWAPSIDAIGGRAAYPNFTQLAEKMRGRVGAAA*
Ga0066903_10001707313	3300005764	Tropical Forest Soil	FRELDYFEQLGALEEHGGFSFEMIEALLGHRLVERYELWRPSIEAIGGSATYPLFERLAKKMQAAAAVS*
Ga0070766_104092061	3300005921	Soil	VEFIRRWNEDSLVEARHLVAQFQTPQALRDAMKRFIAENSVQAYVLYRELDYFEQLGALEKHGGVDFEMIRTLLGRRLIDRWELWQPTIDAIGGGQTYPMFDRLVTKMRAAV*
Ga0070717_118112152	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPTSCDRELGFFEQLGALEKHGGFDFQLIRTLLGRRLIDRWEMWRPSLDVIGRDAYPMFEYLVTKMRAVV*
Ga0070715_104403371	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LRHVAANDTEAYVLFRELDYFEQLGAMEQHGGFDFELVRLLLGHRLIDRWELWRPSIDALGGPQVYPLFDHLARKMQQALATG*
Ga0070765_1000215441	3300006176	Soil	LDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSIDAIGGSAAYPMFERLATKMRAQV*
Ga0070765_1002188403	3300006176	Soil	LDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLAAKMRAQV*
Ga0075434_1002650591	3300006871	Populus Rhizosphere	EAHGGFDFELVRLLLGRRLVDRWELWRPSIDALGGPQVYPLFERLARKMEQALAAG*
Ga0073928_109497863	3300006893	Iron-Sulfur Acid Spring	DYFEQLGALEKHGGFDFELIRTLLGPRLIDRWEMWQPSIDAIGGRAAYPMFERLVTKMRTQM*
Ga0105237_115871332	3300009545	Corn Rhizosphere	EEYGGFDLKLVELLLGRRLIERWELWKPSIDELGGASTYPMFERLVDKMRMLV*
Ga0105249_117586991	3300009553	Switchgrass Rhizosphere	LDYFEQLGALEDHGGLHFGLIQRMLGRRLVDRYELWAPSIEAIGGRDVYPMFTQLAEKMRAATRA*
Ga0126373_100155276	3300010048	Tropical Forest Soil	VLYRELDYFEQLGALEEHGGFDFELIRLLLGRRLIDRWEMWQPTIEAIGAISAYPMFERLVTKMRASV*
Ga0126373_112852091	3300010048	Tropical Forest Soil	LDYFEQLGALEEHGGFDFELIRMLLGRRLIDRWEMWQPTIEAIGGNATYPKFNRLVTKMRAAT*
Ga0126373_114244902	3300010048	Tropical Forest Soil	LVAENARDAYVLYRELDYFEQLGALEEHGGFDFELIRTLLGARLITRWEMWQPTIEAIGGRDAYPMFERLVTKMRATV*
Ga0126373_122837982	3300010048	Tropical Forest Soil	FFRRWDEDPLVETRRLIAQFETPEALRDAVRRFIAENSVNAYVLYRELDFFEQLGALEKHGGFDFELIRTLLGRRLIERWEMWRPAIDLIGRDTYPMFERLVTKMRAVV*
Ga0126379_107670522	3300010366	Tropical Forest Soil	WNEAPLVETRRLVAQFQTAEALRDAMTRFIAENSVQAYVLYRELDYFEQLGALEKHGGFDFELIKTLLGRRLIDRWEMWQPAIDAIGGKDAYPMFDRLVTKMRAAV*
Ga0136449_1036488341	3300010379	Peatlands Soil	GGFDFELIRTMLGHRLIDRWEMWLPSIDVIGRDAYPMFERLVTKMRAVV*
Ga0126359_10742301	3300010869	Boreal Forest Soil	NSAEAYILYRELDYFEQLGALERHGGFDFELIRTLLGGRLIDRWEMWQPSIEAIGGSAAYPMFERLVSKMRAEL*
Ga0150984_1150147243	3300012469	Avena Fatua Rhizosphere	EAYILFREPDYFEQLGAMEQHGGFDFELVRLLLGRRLIDRWELWRPSIDALGGPSVYPMFERLVRKMERATAAA*
Ga0157290_104601891	3300012909	Soil	LYRELDYFEQLGALEDQGGIHFRLIHAMLGRRLVDRYELWAPSIEAIGGVDVYPMFTRLAEKMRVATR*
Ga0164298_112262112	3300012955	Soil	RELDYFEQLGALEEHGGLDFGLVRAMLGERLVDRWELWAPSIDAIGGTEVYPMFTRLAGKMRAATRG*
Ga0164305_117776021	3300012989	Soil	RELDYFEQLGALEEHGGFSFAMIEALLGRRLVERYELWRPSIEAIGGSAAYPMFERLAKKMEARLSTAGSARPA*
Ga0182035_119415072	3300016341	Soil	VLYRELDFFEQLGALEEHGGFDFELIRTLLGRRLIDRWEMWRPSIDVIGRDSYPMFERLVTKMRAVA
Ga0187783_112364131	3300017970	Tropical Peatland	RFVAENSVNAYVLYRELDYFEQLGALEKHGAVDFEMIRTLLGRRLIDRWELWKPAIDAIGDGQAYPMFGRLVTKMRTTAGQAGVT
Ga0187781_108795352	3300017972	Tropical Peatland	AAENSVNAYVLYRELDYFEQLGALETHGAVDFEMIRTLLGRRLIDRWELWKPAIDAIGDGQAYPMFGRLVTKMRTTAGQAGVT
Ga0210399_100700423	3300020581	Soil	MVETRRLVAQFETPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSIDAIGGNAAYPMFERLATKMRAQV
Ga0210395_106898921	3300020582	Soil	FIAENSVHAYVLYRELDYFEQLGALEKHGAVDFEMIRTLLGRRLIDRWELWRPTIDAIGGGGQAYPMFDHLVTKMRAAV
Ga0210395_111859462	3300020582	Soil	TPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLAAKMRAQV
Ga0210401_107525002	3300020583	Soil	EQLGALERHGGFDFELIKTLLGGRLIDRWEMWQPSIDAIGGSAAYPMFERLVTKMRATL
Ga0210404_100845843	3300021088	Soil	YRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLATKMRAQV
Ga0210405_101966861	3300021171	Soil	ELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSIDAIGGSAAYPMFERLATKMRAQV
Ga0210405_104324951	3300021171	Soil	LVAEFKTPEALRDAMTLFIAENSADAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLIDRWDLWQPTIDALGGTAAYPMFERLVTKMRAALGSQHASTEPL
Ga0210396_101087031	3300021180	Soil	ETPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLARKMRAQV
Ga0210396_115471951	3300021180	Soil	HGGFDFELIKTLLGRHLIDRWEMWQPTIEAIGGRDAYPMFDRLVAKMRAAV
Ga0210393_102421733	3300021401	Soil	YVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLATKMRAQV
Ga0210385_100514674	3300021402	Soil	KHGGFDFELIKTLLGRHLIDRWEMWQPTIEAIGGRDAYPMFDRLVAKMRAAV
Ga0210385_101213574	3300021402	Soil	RRLIAQFQTPQALADAMTRFIAENSVSAYVLYRELDYFEQLGALEKHGAVDFEMIRTLLGRRLIDRWELWRPAIDAIGDGQAYPMFGLLVAKMRAAAGQTGLT
Ga0210385_115772291	3300021402	Soil	LVAQFQTAEALRDAMTRFIAENSVQAYVLYRELDYFEQLGALEKHGGFDFELIKTLLGRRLIDRWEMWQPTIETIGGKDAYPMFDRLVTKMRAAV
Ga0210397_101157261	3300021403	Soil	NSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLATKMRAQV
Ga0210397_104422482	3300021403	Soil	ATTAVDFFRRWNESPLVETRRLIARFGTPEALRDAMTRFIAEDSEQAYVLYRELDYFEQLGALEKHGGFDFELIKTLLGRRLIDRWEMWQPAIEAIGGRSTYPMFDRLVTKMRAALPAQRSPR
Ga0210389_102703301	3300021404	Soil	QFETGEALRDALTRFIAVNSPEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGPRLIDRWEMWRPSIDALGGSAAYPMFEHLVTKMRAEV
Ga0210387_106635241	3300021405	Soil	QLGALEQHGGFDFELIRAMLGRRLIDRWELWQPSIEALGGDDAYPMFGRLVKKMRAEV
Ga0210387_114146531	3300021405	Soil	FVAENSAEAYVLYRELDYFEQLGALEQHGGFDFELIRAMLGRRLIDRWEMWQPSIEAIGGTATYPMFNRLVAKMRAADL
Ga0210386_110427741	3300021406	Soil	RWSESPMVETRRLVAQFETPEALRDAMIRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSIDAIGGSAAYPMFERLATKMRAQV
Ga0210386_117715451	3300021406	Soil	EAYILYRELDYFEQLGALEEHGGFDFELIRTLLGPRLIERWEMWQPSINAMGPGAAYPMFERLVTKMRAAA
Ga0210383_101106703	3300021407	Soil	LVAQFETPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSIDAIGGNAAYPMFERLATKMRAQV
Ga0210383_101768352	3300021407	Soil	LDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLAAKMRAQV
Ga0210383_110929392	3300021407	Soil	LDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSINAIGGSAAYPMFERLATKMRAQV
Ga0210394_116504922	3300021420	Soil	ALRDAMTLFIAENSADAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLIDRWDLWQPSIDALGGTAAYPMFEGLVTKMRAAL
Ga0210391_102949312	3300021433	Soil	MVETRRLVAEFETPEALRDAMTVFIAENSADAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLIDRWDLWQPSIEALGGTAAYPMFERLVTKMRTAL
Ga0210390_109035981	3300021474	Soil	ETVVEFIRRWNDGPLEETRHLVAQFETPEELRDAMTGFIAENSIQAFILYRELDYFEQLGALVEHGGADFGLIRTLLGHRLIDRWEMWQPSIDAIGGTATYPMFANLVTKMRAAV
Ga0210390_113543672	3300021474	Soil	TPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLTDRWEMWQPSIDAIGGSATYPMFERLATKMRAQL
Ga0210398_102437112	3300021477	Soil	LDDFEQRGALEKHGGFDFELIKTLLGRHLIDRWEMWQPTIEAIGGRDAYPMFDRLVAKMRAAV
Ga0126371_111010322	3300021560	Tropical Forest Soil	VLYRELDYFEQLGALEEHGGFDFELIRLLLGRRLIDRWEMWQPTIEAIGAISAYPMFERLVTKMRASV
Ga0126371_122029922	3300021560	Tropical Forest Soil	MEETRRLVDRYKTAEELRDALLRFIDEDSIQAFVLYRELDYFEQLGALEAGGGVDFDIIRMLLGYRLIERWELWSPSIDALGGLRTYPMFRALVTKMRGVLAAA
Ga0126371_133865521	3300021560	Tropical Forest Soil	AQFETPDALRDAMTRFIAENSVNAYVLYRELDFFEQLGALEKHGGFDFDLIRTLLGRRLIDRWDMWRPSIDVIGRDAYPMFERLVNKMRAVV
Ga0242656_10503351	3300022525	Soil	RLVAQFETPEALRDAMMRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLTDRWEMWQPSIDAIGGSATYPMFERLATKMRAQL
Ga0242668_11527522	3300022529	Soil	RDAMMRFIAENSAEAYVLYRELDYFEQLGALENHGGFDFELIRTLLGRRLTDRWEMWQPSIDAIGGSATYPMFERLATKMRAQL
Ga0242653_10817011	3300022712	Soil	KNSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLTDRWEMWQPSIDAIGGSATYPMFERLATKMRAQL
Ga0242665_100909612	3300022724	Soil	MIRFIAENSAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLTDRWEMWQPSIDAIGGSATYPMFERLATKMRAQL
Ga0224565_10268512	3300024176	Plant Litter	NSVQAYVLYRELDYFEQLGALEKHGGVDFEMIRTLLGRRLIDRWELWQPTIDAIGDGQAYPMFDRLVTKMRAAV
Ga0208586_10734471	3300025588	Arctic Peat Soil	AEAYILYRELDYFEQLGALERHGGFDFELIRALLGRRLIDRWEMWQPSIDAIGGSAAYPMFEGLVSKMRAAL
Ga0208220_11927192	3300025627	Arctic Peat Soil	AAENSAEAYILYRELDYFEQLGALERHGGFDFELIRALLGRRLIDRWEMWQPSIEAIGGSAAYPMFERLVSKMRAAL
Ga0208480_10177635	3300025633	Arctic Peat Soil	AEAYILYRELDYFEQLGALERHGGFDFELIRALLGRRLIDRWEMWQPSIDAIGGSAAYPMFERLVSKMRAAL
Ga0208589_11005642	3300025634	Arctic Peat Soil	RHGGFDFELIRALLGRRLIDRWEMWQPSIDAIGGSAAYPMFERLVSKMRAAL
Ga0207671_108902731	3300025914	Corn Rhizosphere	FEQLGALEEYGGFDLKLVELLLGRRLIERWELWKPSIDELGGASTYPMFERLVDKMRMLV
Ga0207652_105997951	3300025921	Corn Rhizosphere	PLVETRRLVARFHTPEALRDALTGYMAENSAEAYVLFRELDFFEQLGALERHGGFDFELIRTMFGRRLIERWELWRPSIDALGGAAAYPMFDRLVTKLRAAV
Ga0207652_114630081	3300025921	Corn Rhizosphere	YATPEALRDAMMGFIESNSVQAYVLYRELDYFEQLGALEEYGGFDLKLVELLLGRRLIERWELWKPSIDALGGASTYPMFERLVDKMRMLV
Ga0207665_114681412	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	EQLGALEEHGGLDFGLVQAMLGERLVDRWELWAPSIDAIGGTEVYPMFTRLAGKMRAATR
Ga0207661_108698121	3300025944	Corn Rhizosphere	FVLFRELDYFEQLGAIEEHGGFDFGLIRSLLGQKLVDRFDLWQPSIEAIGGREVYPNFTQLAEKMRAAVP
Ga0207667_115898471	3300025949	Corn Rhizosphere	AQYESNEALRDAFVGFIAENSVHAYVLYRELDYFEQLGALEEYGGFDLKLVELLLGRRLIERWELWKPSIDALGGASTYPMFERLVDKMRMLV
Ga0207712_116195692	3300025961	Switchgrass Rhizosphere	EQLGALEDHGGLHFGLIQSMLGRRLVDRYELWAPSIEAIGGRDVYPMFTQLAEKMRAATR
Ga0207675_1008855281	3300026118	Switchgrass Rhizosphere	RHLDANDVEAFVLFRELDYFEQLGAMEEHGGFDFGLIEALLGQKLVDRFDLWAPSIDAIGGRAAYPNFTQLAEKMRGRVGAAA
Ga0207698_126897301	3300026142	Corn Rhizosphere	DVEAYVLFRELDYFEQLGAMEEHGGFDFGLIETLLGPKLVDRFDLWSPSIDAIGGRAAYPNFTQLAQKMRVAIA
Ga0208099_10473511	3300027096	Forest Soil	ALRDAMLVFIAENSAEAYVLYRELDYFEQLGALEEHGGFDFELIRTLLGPRLIERWEMWQPSINAIGQGAAYPMFERLVTKMRAAA
Ga0209525_11322992	3300027575	Forest Soil	MMETRRLVAQFETPEALRDALTVFVAENSAEAYILYRELDYFEQLGALERHGGFDFELIRALLGRRLIDRWEMWQPSIEAIGGSAAYPMFERL
Ga0209007_10942552	3300027652	Forest Soil	QLGALEVHGGADFELIRTLLGHRLIDRWEMWQPSIEAIGGSATYPMFARLVTKMRDAV
Ga0209810_12242821	3300027773	Surface Soil	ENAREAYVLFRELDFFEQLGALEAHGGFDFELIRTLLGPRLVERWDLWQPSVEALGGPDVYPMFARLAEKMRAALAA
Ga0209274_102215281	3300027853	Soil	AQALRDAMTRFIAENSVQAYVLYRELDYFEQLGALEKHGGFDFELIKTLLGRHLIDRWEMWQPTIEAIGGRDAYPMFDRLVAKMRAAV
Ga0209169_102803732	3300027879	Soil	WDEEPLVETRRLVTQFETPEALRDAMARYIAENSVNAYILYRELDFFEQLGALVEHGGFDFDLIRTMLGLRLIDRWEMWLPSIDVIGRDAYPMFERLVTRMRAVV
Ga0209275_100503331	3300027884	Soil	VAVEFFRRWDEGPLVETRRLVAQFETAEALRDAMLGFIAENSAQAYILYRELDYFEQLGALENHGGFDFELIKTLLGHRLIDRWEMWQPSIEAIGGSAAYPMFERLVTKMRAAA
Ga0209275_104039611	3300027884	Soil	ELDYFEQLGALEQHGGFDFDLIKSLLGRRLVDRWEMWQPSIDAMGGRTVYPLFDGLVTKMRAVL
Ga0209380_106021152	3300027889	Soil	YRELNYFEQLGALEKHGGFDFELIKTLLGRHLIDRWEMWQPTIEAIGGRDAYPMFDRLVAKMRAAV
Ga0209624_102650391	3300027895	Forest Soil	AVNSPEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGPRLIDRWEMWQPSIDALGGSAAYPMFERLVTKMRTEM
Ga0209624_110482632	3300027895	Forest Soil	ALVKHGGFDFELIRSLLGQRLIDRWEMWQPTIEVIGGRSAYPMFDHLVAKVRAAG
Ga0209006_105037781	3300027908	Forest Soil	LEETRRLVAQFETPEALRDAMVRFIAENSERAYVLYRELDYFEQLGALEKHGGFDFELVRSLLGQRLIDRWDMWQPTIEAIGGRSTYPMFDQLVAKVRAAG
Ga0209006_113345712	3300027908	Forest Soil	ERAYVLYRELDYFEQLGALETHGGFDFELVRSLLGQRLIDRWEMWQPTIEAIGGRSTYPMFDHLVAKVRATG
Ga0268266_102958892	3300028379	Switchgrass Rhizosphere	YFEQLGAMEQHGGFDFGLVETLLGQKLVDRFELWRPSIDAIGGAAAYPNFIHLAEKMRVSLN
Ga0307297_102983682	3300028754	Soil	DVEAYVLFRELDYFEQLGAMEEHGGFDFGLIQTLLGPKLVERWDLWRPSIDAIGGRAAYPNFTQLAEKMRVAVA
Ga0302229_103617391	3300028879	Palsa	RQAEMAVEFFRRWNEGPLVETRRLVAEFETGEALRDAMMVFIAENSAGAYVLYRELDYFEQLGALEKHAGFDFELIRTLLGRRLIDRWEMWQPSIDAIGGPGVYPMFERLVTKMRAEV
Ga0308309_109589742	3300028906	Soil	HGGFDFELIRTLLGRRLIDRWEMWQPSIDAIGGTATYPMFANLVTKMRAAV
Ga0222748_10716011	3300029701	Soil	EAYVLYRERDYFEQLGALEKHCGFDFELIRTLLGERLTDRGEMWQPSINAIGGSAAYPMFERLAAKMRAQV
Ga0311371_103058822	3300029951	Palsa	MVRFIAENSERAYVLYRELDYFEQLGALEKHGGFDFELVRSLLGQRLIDRWDMWQPTIEAIGGRSTYPMFDQLVAKVRAAG
Ga0311339_109047002	3300029999	Palsa	NESSLEEARRLVTQFETPEALRDAMVRFIAENSERAYVLYRELDYFEQLGALEKHGGFDFELVRSLLGQRLIDRWDMWQPTIEAIGGRSTYPMFDQLVAKVRAAG
Ga0311339_117622842	3300029999	Palsa	KHGGFDFELIRSLLGQRLTDRWEMWQPSIEALGGRAAYPMFERLVTKMRGQA
Ga0311338_112751191	3300030007	Palsa	MVAQFETPEALRDALTRFIAENSVQAYVLYRELDFFEQLGALEKHGGCDFELIKTLLGRRLIERWEMWQPSIDAIGGTDAYPMFDRLVTKMRAAV
Ga0311338_114797381	3300030007	Palsa	ETNEALRDAMVRFIAENSQSAYVLYRELDYFEQLGALEKHGGFDFELIRSLLGQRLIDRWEMWQPTIEVIGGRGAYPMFDQLVGKVRAAG
Ga0311370_105024801	3300030503	Palsa	MVGFIAENSERAYVLYRELDYFEQLGALEKHGGFDFELVRSLLGQRLIDRWDMWQPTIEAIGGRSTYPMFDQLVAKVRAAG
Ga0311356_119983021	3300030617	Palsa	RDAMVRFIAENSQSAYVLYRELDYFEQLGALEKHGGFDFELIRSLLGQRLIDRWEMWQPTIEVIGGRSAYPMFDQLVAKVRAAG
Ga0302308_102792771	3300031027	Palsa	VTQFETPGALRDAMVGFIAENSERAYVLYRELDYFEQLGALEKHGGFDFELVRSLLGQRLIDRWDMWQPTIEAIGGRSTYPMFDQLVAKVRAAG
Ga0265760_101061831	3300031090	Soil	ARRLVAEFETPEALRDAMTIFIAENSADAYVLYRELDYFEQLGALEEHGGFDFELIRTLLGRRLIDRWDLWQPSIDALGGSAAYPMFERLVTKMRAAL
Ga0265760_101236371	3300031090	Soil	RELDYFEQLGALERHGGFEFELIRTLLGRRLIDRWELWQPTIDAIGDGQAYPMFDRLVTKMRAAV
Ga0170824_1037074192	3300031231	Forest Soil	MLETRRLVAEFETPEALRDAMMVFIAENSADAFVLYRELDYFEQLGALEKHGGFDFELIRTLLGRRLIDRWDLWLPSIEALGGTAAYPMFDRLVTKMRAEGGA
Ga0302325_128128811	3300031234	Palsa	SVQAYVLYRELDFFEQLGALEKHGGCDFELIKTLLGRRLIERWEMWQPSIDAIGGTDAYPMFDRLVTKMRAAV
Ga0265316_110402701	3300031344	Rhizosphere	FEQLAALEHVGAIDFDFIRVLLGQRLVDRWELWRPSIEALGDDVYPMFGALVQRMRAER
Ga0302326_134317952	3300031525	Palsa	SLEETRRLVAQFETSEALRDAMVRFIAENSERAYVLYRELDYFEQLGALEKHGGFDFQLVRSLLGQRLIDRWEMWLPTIEAIGGRSAYPMFDQLVAKVRAAG
Ga0318534_103342202	3300031544	Soil	VEAYVLFRELDYFEQLGALDGRGAFDFELIHTLLGRRLIDRWNLWKPSIDALGPDVYPQFARLVERMRRRVASE
Ga0318555_101658991	3300031640	Soil	AATAVEFFRRWDEQPLVEARRLVARFETPEALRDAMARFIAENSVNAYVLYRELDFFEQLGALEEHGGFDFELIRTLLGRRLIDRWEMWRPSIGVIASFNPHLRRGWQWKHR
Ga0318542_107175052	3300031668	Soil	YRELDYFEQLGAVAERGGFDFELIKLMLGRRLIDRWELWSPSIDALGGPDVYPLFARLVTRMRAALAESEALPPRSS
Ga0318560_105490771	3300031682	Soil	IAENSVNAYVLYRELDFFEQLGALEEHGGFDFELIRTLLGRRLIDRWEMWRPSIDVIGRDSYPMFERLVTKMRAVA
Ga0310686_1019256402	3300031708	Soil	VASRAAVVGRRRLVARFPTPEALRDALVQFVADNSAEAYVLYRELDFFAQLGALELHGGFEFELVKTLLGRRLIDRWELWQPSIDAIGGPAAYPMFDRLVTKMRAETCA
Ga0310686_1037636372	3300031708	Soil	ALRDAMARYIAENSVNAYILYRELDFFEQLGALVEHGGFDFELIKSMLGRRLIDRWEMWRPSIDVIGRDAYPMFERLVAKMRAVA
Ga0310686_1039267321	3300031708	Soil	MVQYIAENSERAYVLYRELDYFEQLGALEKHGGFDFELIRSLLGPRLIVRWEMWQPTIAEIGGRDAYPMFDQLVTKVRAAG
Ga0310686_1072295151	3300031708	Soil	LYRELDYFEQLGALEKHGGFDFELIQSLLGRRLIDRWAMWQPAIDEMGGTAAYPMFERLVAKVRAAD
Ga0310686_1081651661	3300031708	Soil	LEKHGGFDFELIKTLLGRRLIDRWEMWQPSIDAIGGRAAYPMFDRLVTKMRAAM
Ga0310686_1140872372	3300031708	Soil	SAEAYVLYRELDYFEQLGALEKHGGFDFELIRTLLGQRLTDRWEMWQPSIDAIGGSAAYPMFERLATKMRAQV
Ga0307476_112766611	3300031715	Hardwood Forest Soil	FEQLGALEKHGGFDFELIKTLLGRRLIDRWEMWQPTIEAIGGTDAYPMFDRLVTKMRAAV
Ga0307474_104241952	3300031718	Hardwood Forest Soil	VAQFQTPQALRDAMMRFIAENSVQAYVLYRELDYFEQLGALEKHGGFDFELIKTLLGRRLIDRWEMWQPTIEAIGGTDAYPMFDRLVTKMRAAV
Ga0318535_105595821	3300031764	Soil	LGALENHGGFDFELIKTLLGRRLIDRWEMWQPAIEAIGGRDTYPMFDRLVTKMRAAT
Ga0318509_104433892	3300031768	Soil	RLVARFETPEALRDAMARFIAENSVNAYVLYRELDFFEQLGALEEHGGFDFELIRTLLGRRLIDRWEMWRPSIDVIGRDSYPMFERLVTKMRAVA
Ga0318523_102921411	3300031798	Soil	AENSVNAYVLYRELDFFEQLGALEEHGGFDFELIRTLLGRRLIDRWEMWRPSIDVIGRDSYPMFERLVTKMRAVA
Ga0307478_103897251	3300031823	Hardwood Forest Soil	NSAEAYILYRELDYFEQLGALERHGGFDFELIKTLLGGRLIDRWEMWQPSIDAIGGRAAYPMFERLVTKMRATL
Ga0306921_116512551	3300031912	Soil	QLGALEEHGGFDFELIRMLLGRRLIDRWEMWQPTIEAIGGSATYPEFDRLVTKMRAAT
Ga0308176_121338501	3300031996	Soil	ILYRELDYFEQLGALEFHGGFDYELIKCLFGRRLIDRWELWEPSIDALGGRAAYPMFHRLVTKLRADV
Ga0308176_123801811	3300031996	Soil	YFEQLGALEELGAVHIDLIQLLLGRQLVDRWDMWKPAIDAMGADAYPMFERLVAKMRRNE
Ga0306922_123255881	3300032001	Soil	ALEEHGGFDFELIRTLLGRRLIDRWEMWRPSIDVIGRDSYPMFERLVTKMRAVA
Ga0306924_119896542	3300032076	Soil	RHIAANDVEAYVLFRELDYFEQLGAMEEHGGFDFGLIKGLLGPKLIDRFDLWRPSIDAIGGRAVYPNFTQLAEKMRAATSTATL
Ga0307471_1003345163	3300032180	Hardwood Forest Soil	ENSDKAFVLYRELDYFEQLGALEKHGGFDFGLIRSLLGRRLVDRWELWRPSIDALGGADAYSMFARLVTKMRAAGELS
Ga0335082_116931461	3300032782	Soil	NDVEAYVLYRELDYFEQLSAIEEHGGFDFGIIETLLGEALVDRYDRWRPSIDAIDARSGRSVYPSFARLAEKMRAATS
Ga0335078_107037653	3300032805	Soil	FVAENSVNAYVLYRELDYFEQLGALEKHGAVDFEMIRTLLGRRLIDRWELWQPAIDAIGGAQAYPMFGRLVTKMRAPTGRGLT
Ga0335080_115989252	3300032828	Soil	RDAFVKFIAANSVDAYVLYRELDYFEQLGALEDRGGFDFEMIRLLLGSRLIDRWALWEPSINAIGGPDAYPMFAKLVAKMRVAV
Ga0335073_104266642	3300033134	Soil	EEAYVLHRELDYFEQLGALEKHGGVDFELIRTLLGRRLIDRWELWKPSIDAMGGSGTYPMFDRLVTKMRAAQR
Ga0335073_108619542	3300033134	Soil	MYRELDFFEQLGALVEHGGFDFELIRTMLGHRLIDRWEMWRSAIDAIGRDAYPMFERLVAKMRAVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences