Metagenome / Metatranscriptome Family F042040

Basic Information
Family ID	F042040
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	40 residues
Representative Sequence	YRPALGTVVRCRSCDSVLMVFVKIHDRTCVDLLGLATLG
Number of Associated Samples	143
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.80 %
% of genes near scaffold ends (potentially truncated)	94.97 %
% of genes from short scaffolds (< 2000 bps)	88.05 %
Associated GOLD sequencing projects	139
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (66.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.786 % of family members)
Environment Ontology (ENVO)	Unclassified (16.352 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.799 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.45% β-sheet: 23.88% Coil/Unstructured: 65.67%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF00561	Abhydrolase_1	9.43
PF00892	EamA	9.43
PF06628	Catalase-rel	2.52
PF01152	Bac_globin	2.52
PF03551	PadR	1.89
PF13478	XdhC_C	1.89
PF01844	HNH	1.26
PF00056	Ldh_1_N	1.26
PF13490	zf-HC2	1.26
PF13546	DDE_5	1.26
PF00005	ABC_tran	1.26
PF01475	FUR	1.26
PF13561	adh_short_C2	1.26
PF01925	TauE	1.26
PF01212	Beta_elim_lyase	0.63
PF12806	Acyl-CoA_dh_C	0.63
PF10282	Lactonase	0.63
PF00753	Lactamase_B	0.63
PF13374	TPR_10	0.63
PF08240	ADH_N	0.63
PF07690	MFS_1	0.63
PF16483	Glyco_hydro_64	0.63
PF01592	NifU_N	0.63
PF13193	AMP-binding_C	0.63
PF13378	MR_MLE_C	0.63
PF03450	CO_deh_flav_C	0.63
PF01935	DUF87	0.63
PF00141	peroxidase	0.63
PF08031	BBE	0.63
PF07931	CPT	0.63
PF03971	IDH	0.63
PF03640	Lipoprotein_15	0.63
PF03860	DUF326	0.63
PF01828	Peptidase_A4	0.63
PF13532	2OG-FeII_Oxy_2	0.63
PF00174	Oxidored_molyb	0.63
PF01042	Ribonuc_L-PSP	0.63
PF04029	2-ph_phosp	0.63
PF00127	Copper-bind	0.63
PF12802	MarR_2	0.63
PF01734	Patatin	0.63
PF00501	AMP-binding	0.63
PF00294	PfkB	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0753	Catalase	Inorganic ion transport and metabolism [P]	2.52
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	2.52
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.89
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.89
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.89
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.26
COG1486	Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase	Carbohydrate transport and metabolism [G]	1.26
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.26
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	1.26
COG2045	Phosphosulfolactate phosphohydrolase or related enzyme	Coenzyme transport and metabolism [H]	1.26
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	1.26
COG2838	Monomeric isocitrate dehydrogenase	Energy production and conversion [C]	0.63
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.63
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.63
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.63
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.63
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.63
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.63
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.63
COG3896	Chloramphenicol 3-O-phosphotransferase	Defense mechanisms [V]	0.63
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.63
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.63
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.63
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.63
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.63
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.63
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.63
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.63
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.63
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.63
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.63
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.63
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.63
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.63
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.63
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.63
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.63
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.12 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.43 %
Unclassified	root	N/A	33.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.26 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.93 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.63 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.63 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.77 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.26 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.63 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.63 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.77 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.26 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.63 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.63 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.63 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.63 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.63 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.63 %
Tolypothrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae	0.63 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.77 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.63 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.63 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.63 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.63 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.63 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.63 %
Tolypothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix	0.63 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.63 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.77 %
Tolypothrix campylonemoides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides	0.63 %
Nocardiopsis chromatogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis chromatogenes	0.63 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.63 %
Microlunatus flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	0.63 %
Saccharothrix deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix deserti	0.63 %
unclassified Streptacidiphilus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → unclassified Streptacidiphilus	0.63 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.63 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.63 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.77 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.63 %
Rhodococcus sp. WB9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. WB9	0.63 %
Streptacidiphilus sp. P02-A3a	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → unclassified Streptacidiphilus → Streptacidiphilus sp. P02-A3a	0.63 %
Nocardiopsis chromatogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis chromatogenes	0.63 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.63 %
Microlunatus flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	0.63 %
Saccharothrix deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix deserti	0.63 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.63 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090003\|LJN_F7QKVOU01DAELT	Not Available	515	Open in IMG/M
3300001544\|JGI20163J15578_10861586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	508	Open in IMG/M
3300002245\|JGIcombinedJ26739_101339411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300004091\|Ga0062387_101656021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300004479\|Ga0062595_102100071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300005336\|Ga0070680_100155731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1919	Open in IMG/M
3300005435\|Ga0070714_101927523	Not Available	576	Open in IMG/M
3300005436\|Ga0070713_101906620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	576	Open in IMG/M
3300005439\|Ga0070711_100230262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1444	Open in IMG/M
3300005439\|Ga0070711_101418855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	604	Open in IMG/M
3300005471\|Ga0070698_100103265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2821	Open in IMG/M
3300005610\|Ga0070763_10730542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300005614\|Ga0068856_102577879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300005617\|Ga0068859_101203243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	834	Open in IMG/M
3300005712\|Ga0070764_10664739	Not Available	639	Open in IMG/M
3300005764\|Ga0066903_100200224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2986	Open in IMG/M
3300005764\|Ga0066903_102602042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	981	Open in IMG/M
3300005993\|Ga0080027_10349508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300006028\|Ga0070717_11465447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	619	Open in IMG/M
3300006163\|Ga0070715_10567092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300006174\|Ga0075014_100716067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300006755\|Ga0079222_10289659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1061	Open in IMG/M
3300006806\|Ga0079220_10888679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	689	Open in IMG/M
3300006871\|Ga0075434_102219773	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006903\|Ga0075426_10720211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300006954\|Ga0079219_11797133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300009098\|Ga0105245_10737146	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1020	Open in IMG/M
3300009524\|Ga0116225_1485177	Not Available	549	Open in IMG/M
3300009545\|Ga0105237_11654920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300009623\|Ga0116133_1137525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300009672\|Ga0116215_1064641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1652	Open in IMG/M
3300009698\|Ga0116216_10114801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1657	Open in IMG/M
3300009700\|Ga0116217_10618287	Not Available	674	Open in IMG/M
3300009840\|Ga0126313_10764777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300010152\|Ga0126318_10551610	Not Available	552	Open in IMG/M
3300010154\|Ga0127503_11309081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300010333\|Ga0134080_10265395	All Organisms → cellular organisms → Bacteria → Terrabacteria group	761	Open in IMG/M
3300010358\|Ga0126370_11256217	Not Available	692	Open in IMG/M
3300010366\|Ga0126379_13530170	Not Available	524	Open in IMG/M
3300010379\|Ga0136449_102098767	Not Available	829	Open in IMG/M
3300010396\|Ga0134126_11131064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300010397\|Ga0134124_12128636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix deserti	600	Open in IMG/M
3300010401\|Ga0134121_10146376	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300010867\|Ga0126347_1491843	Not Available	753	Open in IMG/M
3300011120\|Ga0150983_12892590	Not Available	527	Open in IMG/M
3300012176\|Ga0153952_1106727	Not Available	614	Open in IMG/M
3300012189\|Ga0137388_10085086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2678	Open in IMG/M
3300012201\|Ga0137365_10134441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1859	Open in IMG/M
3300012206\|Ga0137380_10120294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2399	Open in IMG/M
3300012209\|Ga0137379_10916759	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300012211\|Ga0137377_11832113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300013306\|Ga0163162_12255238	Not Available	625	Open in IMG/M
3300014162\|Ga0181538_10376850	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300014325\|Ga0163163_10791610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1011	Open in IMG/M
3300017654\|Ga0134069_1173789	All Organisms → cellular organisms → Bacteria → Terrabacteria group	727	Open in IMG/M
3300017928\|Ga0187806_1091093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300017937\|Ga0187809_10268952	Not Available	621	Open in IMG/M
3300017955\|Ga0187817_10430233	Not Available	842	Open in IMG/M
3300017961\|Ga0187778_11160938	Not Available	540	Open in IMG/M
3300017970\|Ga0187783_10770973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. WB9	694	Open in IMG/M
3300017973\|Ga0187780_10125741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1772	Open in IMG/M
3300018037\|Ga0187883_10741947	Not Available	513	Open in IMG/M
3300018047\|Ga0187859_10331467	Not Available	827	Open in IMG/M
3300018482\|Ga0066669_10564562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300020002\|Ga0193730_1080872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300020075\|Ga0206349_1227365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300020580\|Ga0210403_10902960	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300020581\|Ga0210399_10600934	Not Available	910	Open in IMG/M
3300020582\|Ga0210395_10501777	Not Available	913	Open in IMG/M
3300020582\|Ga0210395_11254568	Not Available	543	Open in IMG/M
3300020582\|Ga0210395_11316439	Not Available	528	Open in IMG/M
3300020610\|Ga0154015_1042013	Not Available	614	Open in IMG/M
3300021088\|Ga0210404_10410984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300021180\|Ga0210396_10770433	Not Available	827	Open in IMG/M
3300021181\|Ga0210388_10124014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2229	Open in IMG/M
3300021404\|Ga0210389_11173744	Not Available	592	Open in IMG/M
3300021404\|Ga0210389_11268576	Not Available	565	Open in IMG/M
3300021407\|Ga0210383_11330731	Not Available	600	Open in IMG/M
3300021432\|Ga0210384_10816718	Not Available	830	Open in IMG/M
3300021432\|Ga0210384_11734642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300021433\|Ga0210391_11036053	All Organisms → cellular organisms → Bacteria → Terrabacteria group	638	Open in IMG/M
3300021474\|Ga0210390_11004161	Not Available	682	Open in IMG/M
3300021475\|Ga0210392_11380929	Not Available	527	Open in IMG/M
3300021479\|Ga0210410_10900955	All Organisms → cellular organisms → Bacteria → Terrabacteria group	771	Open in IMG/M
3300021559\|Ga0210409_10627349	All Organisms → cellular organisms → Bacteria → Terrabacteria group	944	Open in IMG/M
3300022528\|Ga0242669_1062788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300022529\|Ga0242668_1074802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300024181\|Ga0247693_1002531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2136	Open in IMG/M
3300025412\|Ga0208194_1046999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	669	Open in IMG/M
3300025588\|Ga0208586_1025275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	1416	Open in IMG/M
3300025627\|Ga0208220_1141385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300025634\|Ga0208589_1014507	All Organisms → cellular organisms → Bacteria	2327	Open in IMG/M
3300025906\|Ga0207699_10476739	All Organisms → cellular organisms → Bacteria → Terrabacteria group	898	Open in IMG/M
3300025915\|Ga0207693_10593803	All Organisms → cellular organisms → Bacteria → Terrabacteria group	862	Open in IMG/M
3300025915\|Ga0207693_10694393	Not Available	788	Open in IMG/M
3300025928\|Ga0207700_11841962	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300025929\|Ga0207664_10566748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1019	Open in IMG/M
3300025929\|Ga0207664_11481291	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300025941\|Ga0207711_11037257	All Organisms → cellular organisms → Bacteria → Terrabacteria group	760	Open in IMG/M
3300025944\|Ga0207661_10142414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2064	Open in IMG/M
3300026067\|Ga0207678_10183210	Not Available	1788	Open in IMG/M
3300027609\|Ga0209221_1089030	Not Available	799	Open in IMG/M
3300027812\|Ga0209656_10223305	Not Available	903	Open in IMG/M
3300027817\|Ga0209112_10182256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300027884\|Ga0209275_10889815	Not Available	513	Open in IMG/M
3300027908\|Ga0209006_11225286	Not Available	585	Open in IMG/M
3300028379\|Ga0268266_11573530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300028742\|Ga0302220_10125354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis chromatogenes	992	Open in IMG/M
3300028789\|Ga0302232_10124794	Not Available	1307	Open in IMG/M
3300028801\|Ga0302226_10350718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300028808\|Ga0302228_10015055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4103	Open in IMG/M
3300028877\|Ga0302235_10164718	Not Available	986	Open in IMG/M
3300029910\|Ga0311369_11384209	Not Available	533	Open in IMG/M
3300030007\|Ga0311338_10044069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6035	Open in IMG/M
3300030007\|Ga0311338_11091974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300030043\|Ga0302306_10396017	Not Available	528	Open in IMG/M
3300030524\|Ga0311357_10622362	Not Available	990	Open in IMG/M
3300030580\|Ga0311355_10007261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14646	Open in IMG/M
3300031543\|Ga0318516_10367223	All Organisms → cellular organisms → Bacteria → Terrabacteria group	830	Open in IMG/M
3300031544\|Ga0318534_10046224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2428	Open in IMG/M
3300031544\|Ga0318534_10597342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300031640\|Ga0318555_10341598	Not Available	811	Open in IMG/M
3300031640\|Ga0318555_10429516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300031681\|Ga0318572_10260785	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1020	Open in IMG/M
3300031682\|Ga0318560_10271628	Not Available	912	Open in IMG/M
3300031708\|Ga0310686_106566963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6423	Open in IMG/M
3300031718\|Ga0307474_10439898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1018	Open in IMG/M
3300031747\|Ga0318502_10232214	Not Available	1073	Open in IMG/M
3300031753\|Ga0307477_10834636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	611	Open in IMG/M
3300031754\|Ga0307475_10704355	Not Available	805	Open in IMG/M
3300031765\|Ga0318554_10062981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2047	Open in IMG/M
3300031765\|Ga0318554_10353630	Not Available	835	Open in IMG/M
3300031779\|Ga0318566_10130958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1240	Open in IMG/M
3300031796\|Ga0318576_10559751	Not Available	539	Open in IMG/M
3300031805\|Ga0318497_10533803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300031821\|Ga0318567_10831744	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031823\|Ga0307478_11463860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300031833\|Ga0310917_10996030	Not Available	562	Open in IMG/M
3300031859\|Ga0318527_10116270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1107	Open in IMG/M
3300031859\|Ga0318527_10254854	All Organisms → cellular organisms → Bacteria → Terrabacteria group	746	Open in IMG/M
3300031890\|Ga0306925_11124680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300031946\|Ga0310910_11359825	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031959\|Ga0318530_10353028	Not Available	609	Open in IMG/M
3300031962\|Ga0307479_10667637	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300031996\|Ga0308176_12854426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	513	Open in IMG/M
3300032160\|Ga0311301_10234157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3064	Open in IMG/M
3300032160\|Ga0311301_10419065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2038	Open in IMG/M
3300032160\|Ga0311301_11443652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300032160\|Ga0311301_11694745	Not Available	761	Open in IMG/M
3300032805\|Ga0335078_11674996	All Organisms → cellular organisms → Bacteria → Terrabacteria group	699	Open in IMG/M
3300032828\|Ga0335080_12356232	Not Available	508	Open in IMG/M
3300032895\|Ga0335074_10240351	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300032896\|Ga0335075_11208814	Not Available	655	Open in IMG/M
3300032954\|Ga0335083_10396186	Not Available	1181	Open in IMG/M
3300033134\|Ga0335073_11119425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300033289\|Ga0310914_11834147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → unclassified Streptacidiphilus → Streptacidiphilus sp. P02-A3a	511	Open in IMG/M
3300033407\|Ga0214472_10658568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300033475\|Ga0310811_10959518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	758	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.20%
Host-Associated	Host-Associated	8.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.02%
Aquatic	Environmental → Aquatic	8.18%
Plants	Host-Associated → Plants	7.55%
Arthropoda	Host-Associated → Arthropoda	0.63%
Fungi	Host-Associated → Fungi	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.10%
Freshwater	Environmental → Aquatic → Freshwater	7.55%
Peat	Environmental → Terrestrial → Peat	6.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Sediment	Environmental → Aquatic → Sediment	0.63%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.63%
Roots	Host-Associated → Plants → Roots	0.63%
Mycelium	Host-Associated → Fungi → Mycelium	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.09%
Loam	Environmental → Terrestrial → Soil → Loam	15.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.63%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.63%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.26%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.26%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.26%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.63%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.63%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.63%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.63%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.63%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090003	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN	Host-Associated	Open in IMG/M
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012176	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ036 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042040

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJN_01465660	2088090003	Quercus Rhizosphere	PGLGQVVRCRSCDSVLMVFIEARGLICVDLSGLASLG
JGI20163J15578_108615861	3300001544	Termite Gut	RLIVYRQAPGTVVRCPSCRSVLMVFVQKRGVACVDLMGLASLS*
JGIcombinedJ26739_1013394112	3300002245	Forest Soil	ARQVGELAVYAHAPGTVVRCPSCDNVLMVFVKIHDRTCVDLMGLAALG*
Ga0062387_1016560212	3300004091	Bog Forest Soil	TVVRCRHCDNLLMTFVTIRGVTCVDLGGLVALEHDETAS*
Ga0062595_1021000711	3300004479	Soil	LRAPGTVVRCRSCLNVLLVLVTAHGTTCVDLGGLVALERER*
Ga0070680_1001557311	3300005336	Corn Rhizosphere	YRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0070714_1019275232	3300005435	Agricultural Soil	AELAVYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0070713_1019066201	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AVYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0070711_1002302622	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ELAVYLTDLGAVVRCRSCGSVLMVFVSRREVTCVDLMGLASLS*
Ga0070711_1014188551	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GAVSVVAELAVYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0070698_1001032656	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GAVSQVAELAVYRPALGTVVRCRNCNAVLMTFVRIRGITCVDLQGLASLT*
Ga0070763_107305422	3300005610	Soil	PGTVVRCRSCDSVLMVFVKVHDRTCVDLLGLAVLG*
Ga0068856_1025778791	3300005614	Corn Rhizosphere	LGTVVRCRSCDAMLMTFVRIRGVVCVDLMGLASLG*
Ga0068859_1012032431	3300005617	Switchgrass Rhizosphere	GLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0070764_106647391	3300005712	Soil	GTVVRCRSCDSVLMVFVKVHERTCVDLLGLASLG*
Ga0066903_1002002243	3300005764	Tropical Forest Soil	VYRPGLGTVVRCRTCGSVLMVLAQFRGITCVDLPGLAALG*
Ga0066903_1026020421	3300005764	Tropical Forest Soil	AELVVYRPALGTVVRCRLCGNVLMVFTQIRGITCVDMQGIAEMN*
Ga0080027_103495081	3300005993	Prmafrost Soil	LRAPGTVVRCRTCDSVLMVFVKTHQRTCVDLLGLAALG*
Ga0070717_114654471	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAVYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0070715_105670922	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0075014_1007160672	3300006174	Watersheds	ALGTVVRCRTCDAVLMAFVRIHSVTCVDLQGLASLA*
Ga0079222_102896593	3300006755	Agricultural Soil	AVYMPELGTVVRCRSCDAMLMTFVRIRGVVCVDLMGLASLG*
Ga0079220_108886792	3300006806	Agricultural Soil	DLGAVVRCRSCGSVLMVFVSRREITCVDLMGLASLS*
Ga0075434_1022197731	3300006871	Populus Rhizosphere	AVSVVAELAVYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLTSLG*
Ga0075426_107202111	3300006903	Populus Rhizosphere	YLSELGAVVRCRSCDSVLMVFVSVREVVCVDLMGLASLS*
Ga0079219_117971331	3300006954	Agricultural Soil	LGAVVRCRSCDSVLMVFVSVREVVCVDLMGLASLS*
Ga0105245_107371462	3300009098	Miscanthus Rhizosphere	VYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0116225_14851772	3300009524	Peatlands Soil	ALGTVVRCRACDAVLMTFVQIHGVTCVDLQGLASLA*
Ga0105237_116549202	3300009545	Corn Rhizosphere	GTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0116133_11375252	3300009623	Peatland	ELAVYLQAPGTVVRCQSCDSILMVFVKMHDRTCVDLMGLAALG*
Ga0116215_10646413	3300009672	Peatlands Soil	RSALGTVVRCRACDAVLMTFVQIHGVTCVDLQGLASLA*
Ga0116216_101148011	3300009698	Peatlands Soil	LGTVVRCRACDAVLMTFVQIHGVTCVDLQGLASLA*
Ga0116217_106182871	3300009700	Peatlands Soil	VNRPGLGTVVRCRTCDAVLIVFLPVRGITCVDLQGLASLT*
Ga0126313_107647773	3300009840	Serpentine Soil	AVARCRSCRGLLAVLVEVRGVTCVDLTGLASLERS*
Ga0126373_113636691	3300010048	Tropical Forest Soil	YQRAPGTVVRCRSCGAVLMVVVRHRQQNCVDLLGLAALET*
Ga0126318_105516102	3300010152	Soil	VAELAVYRPGPGTVVRCPSCDSVLMVFVTIRGTTCVDLRGLARLGAGT*
Ga0127503_113090812	3300010154	Soil	LRGPGTVVRCRSCGSVLMVFVTIHDRTCVDLMGLAVLG*
Ga0134080_102653952	3300010333	Grasslands Soil	LGLGTVVRCRSCQNVLMVFVSLHGTTCTDLMGLASMG*
Ga0126370_112562172	3300010358	Tropical Forest Soil	MPELGIVVRCRSCNAVLMVFVRIHEVTCVDLEGLASLS*
Ga0126379_135301701	3300010366	Tropical Forest Soil	VYRPGLGTVVRCRTCGSVLMVLAQFRGITCVDRPGLAALG*
Ga0136449_1020987671	3300010379	Peatlands Soil	ALGTVVRCRACDAVLMTFVQIHGVTCVDLQGLAGLA*
Ga0134126_111310642	3300010396	Terrestrial Soil	TRQVAELAVYAYAHAPGTVVRCPSCDSVLMVFVKIHDRTCVDLLGLAALG*
Ga0134124_121286361	3300010397	Terrestrial Soil	PGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0134121_101463762	3300010401	Terrestrial Soil	YRPGLGTVVRCRSCDSVLMVFVSLHGATCTDLMGLASLS*
Ga0126347_14918431	3300010867	Boreal Forest Soil	LGTVVRCRSCDSVLMVFVTIHDRTCVDLMGIAVLG*
Ga0150983_128925902	3300011120	Forest Soil	VYLRAPGTVVRCRSCESVLMVFVTVHDRTCVDLMGLAALG*
Ga0153952_11067271	3300012176	Attine Ant Fungus Gardens	GVCGTRGQVAEMPVYQGRMGSVVRCRVCDNVLMVFVEVRGITCVDLSGLASLS*
Ga0137388_100850864	3300012189	Vadose Zone Soil	LAVYRPALGTVVRCRNCGAVLMTFVRIRGIVCVDLEGLASLT*
Ga0137365_101344413	3300012201	Vadose Zone Soil	TVVRCRSCGSVLMVLVRRADVIGVDLSGLADLSC*
Ga0137380_101202943	3300012206	Vadose Zone Soil	EIGTVVRCRSCQSVLMVFVSVRGVTFVELMGLASLS*
Ga0137379_109167591	3300012209	Vadose Zone Soil	GTVVRCRACGNVLMVFARHRRMMCVDLGGLADLAA*
Ga0137377_118321131	3300012211	Vadose Zone Soil	LRAPGTVVRCRSCCSVMMVLVTVQGTTCVDLRGLARLERL*
Ga0163162_122552381	3300013306	Switchgrass Rhizosphere	VSVVAELAVYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS*
Ga0181538_103768502	3300014162	Bog	LGTVVRCRTCDAVLMTFVQIHGVTCVDLQGLASLA*
Ga0163163_107916103	3300014325	Switchgrass Rhizosphere	PGTVVRCPNCDSVLMVFVIAHGLICVDLTGLASLG*
Ga0134069_11737892	3300017654	Grasslands Soil	LTEIGTVVRCRSCQSVLMVFVSVRGITCVDLMGLASLS
Ga0187806_10910934	3300017928	Freshwater Sediment	GTVVRCRTCGSVLMMLVRRRDVTSVDLSGLARLSQPGSALSRQAG
Ga0187809_102689522	3300017937	Freshwater Sediment	YQPKLGTVVRCRSCDNVLMVFVEVRGVTCVDLRGLAQLA
Ga0187817_104302332	3300017955	Freshwater Sediment	GTVVRCRSCDNVLMVFVEVRGVTCVDLQGLASLTST
Ga0187778_111609381	3300017961	Tropical Peatland	RTCTVVRCRACDAVLMAFVQIRGVTCVDLQGLASLT
Ga0187783_107709731	3300017970	Tropical Peatland	TVYLRAPGTVVRCRTCDTVLMVFVTTHNRTCVDLQGLAVFG
Ga0187780_101257413	3300017973	Tropical Peatland	ELAVNRPGLGTVVRCRTCDAVLMVVLPVRGSTCVDVQGLASLT
Ga0187883_107419471	3300018037	Peatland	AVSQVAELAVYRHGLGTVVRCRGCESILMVFVRVRGITGVDLQGLASLTPPDIGA
Ga0187859_103314672	3300018047	Peatland	PGTVVRCRSCDSVLMVFVRIHDRTCVDLLGLAALG
Ga0066669_105645621	3300018482	Grasslands Soil	RGPGTVVRCRSCGNVLMVFVTIHDRTCVDLMGLASLG
Ga0193730_10808723	3300020002	Soil	GFRLRGPGTVVRCRSCDSVLMVFVTIHDRTCVDLMGLATLG
Ga0206349_12273652	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	ASGPVAGLAVYGPAPGTVVRCPNCDSVLMVFIVAHGLICVDLTGLASLG
Ga0210403_109029602	3300020580	Soil	APGTVVRCRTCGNVLMVFAEVHGRNCVDLRGLAALEAV
Ga0210399_106009342	3300020581	Soil	QVAEMPVYQARMGAVVRCRVCDNVLMVFVEVRGITCVDLSGLASLS
Ga0210395_105017772	3300020582	Soil	YRPGLGTVVRCRTCEAILMTFVQIHGVTCVDLQGLASLA
Ga0210395_112545681	3300020582	Soil	PGRVVRCRTCDNVLMVFVTIHDRTCVDLQGLAVLG
Ga0210395_113164391	3300020582	Soil	YQARMGAVVRCRVCDNVLMVFVEVRGITCVDLSGLASLS
Ga0154015_10420132	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	LGTVVRCRSCDSVLMVFVKIHNRICVDLLGLAALG
Ga0210404_104109841	3300021088	Soil	VYLTDLGAVVRCRSCGSVLMVFVSRREVTCVDLMGLASLS
Ga0210396_107704332	3300021180	Soil	GQVAEMAVYQPRLGTVVRCRVCDNVLMVFVAIGGVTCVDLRGLASLS
Ga0210388_101240141	3300021181	Soil	VYRPALGTVVRCRSCDSVLMVFVKIHDRTCVDLLGLATLG
Ga0210389_111737442	3300021404	Soil	VGELAVYAQAPGTVVRCPSCDNVLMVFVKIHDRTCVDLLGLAALG
Ga0210389_112685762	3300021404	Soil	VYRPGPGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS
Ga0210383_113307311	3300021407	Soil	GRVSQVAELAVYRSTLGTVVRCRSCDAVLMAFVQIHDVTCVDLLGLASLT
Ga0210384_108167182	3300021432	Soil	VAEMPVYQARMGAVVRCRVCDNVLMVFVEVRGITCVDLSGLASLS
Ga0210384_117346421	3300021432	Soil	PVAELVVYRPGLGTVVRCRVCGCVLMVFTQVRGITCVDLQGLAALN
Ga0210391_110360531	3300021433	Soil	GTARQVGELAVYAHAPGTVVRCPSCDNVLMVFVKIHDRTCVDLLGLASLG
Ga0210390_110041611	3300021474	Soil	GSVGQVAEFAVYMPGLGTVVRCRVCNAVLMAFVQIRGIHCVDLEGLASLT
Ga0210392_113809292	3300021475	Soil	VARCRSCQSVLMVFTEVRRVTCVDLMGLASLSYGPN
Ga0210410_109009552	3300021479	Soil	VYLSHLGAVVRCRSCGSVLMVFVSRREVTCVDLMGLASLS
Ga0210409_106273492	3300021559	Soil	LGAVVRCRSCGSVLMVFVSRREVTCVDLMGLASLS
Ga0242669_10627882	3300022528	Soil	GPVAGLAVYAQGPGTVVRCPACDSVLMVFVTMHSLVCVDLSGLASLGQGGS
Ga0242668_10748022	3300022529	Soil	QVGELAVYAHAPGTVVRCPSCDNVLMVFVKIHDRTCVDLLGLAALG
Ga0247693_10025311	3300024181	Soil	SVVAELAVYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS
Ga0208194_10469991	3300025412	Peatland	YLQAPGTVVRCQSCDSILMVFVKMHDRTCVDLMGLAALG
Ga0208586_10252753	3300025588	Arctic Peat Soil	LLVYLRAPGTVVRCPTCDNLLMAFVTVHDRMCVDLQGLAVLG
Ga0208220_11413851	3300025627	Arctic Peat Soil	PGTVVRCPTCDNLLMVFVTVHDRMCVDLQGLAVLG
Ga0208589_10145071	3300025634	Arctic Peat Soil	LVYLRAPGTVVRCPTCDNLLMVFVTVHDRMCIDLQGLAVLG
Ga0207699_104767392	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AVYRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS
Ga0207693_105938031	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ELAVYLTDLGAVVRCRSCGSVLMVFVSRREVTCVDLMGLASLS
Ga0207693_106943932	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VVYMPGLGTVVRCRSCDAMLMTFVQIRGVVCVDLEGLASLG
Ga0207700_118419621	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS
Ga0207664_105667481	3300025929	Agricultural Soil	VAGLAVYGPAPGTVVRCPNCDSVLMVFVVAHGLICVDLTGLASLG
Ga0207664_114812911	3300025929	Agricultural Soil	LAVYLTDLGAVVRCRSCGSVLMVFVSRREVTCVDLMGLASLS
Ga0207711_110372572	3300025941	Switchgrass Rhizosphere	PGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS
Ga0207661_101424141	3300025944	Corn Rhizosphere	GPAPGTVVRCPNCDSVLMVFVIAHGLICVDLTGLASLG
Ga0207678_101832104	3300026067	Corn Rhizosphere	LAVYAHAPGTVVRCRSCDSVLMVFVKIHNRTCVDLLGLAALG
Ga0209221_10890302	3300027609	Forest Soil	LRAPGTVVRCRSCESILMVFVKIHDRTCVDLLGLAALG
Ga0209656_102233052	3300027812	Bog Forest Soil	GLGTVVRCRSCDAVLMTFVQIHSVTCVDLQGLASLA
Ga0209112_101822562	3300027817	Forest Soil	VAELPVYQARLGTVVRCRACASVLMVFVQVRGTYCVDLEGLASLS
Ga0209275_108898151	3300027884	Soil	YLRAPGTVVRCRSCESVLMVFVTIHDRTCVDLLGLAALG
Ga0209006_112252861	3300027908	Forest Soil	PGTVVRCRSCESVLMVFVKVHDRTCVDLLGLAALG
Ga0268266_115735301	3300028379	Switchgrass Rhizosphere	YRPGLGTVVRCRSCDSVLMVFVSLHGTTCTDLMGLASLS
Ga0302220_101253541	3300028742	Palsa	LAVYRPALGTVVRCRSCDSVLMVFVKIHDRTCVDLLGLATLG
Ga0302232_101247941	3300028789	Palsa	LAVYLRAPGTVVRCRSCDSVLMVFVTIHDRTCVDLLGLAVLG
Ga0302226_103507181	3300028801	Palsa	YRPALGTVVRCRSCDSVLMVFVKIHDRTCVDLLGLATLG
Ga0302228_100150557	3300028808	Palsa	VSQVAELAVYLPGLGTVVRCRGCGSVLMVFVRVRGVICVDTEGLASLTPA
Ga0302235_101647181	3300028877	Palsa	PGTVVRCRTCDSVLMVLVRRKDVTSVDLSGLADLSQR
Ga0311369_113842092	3300029910	Palsa	LRAPGTVVRCRSCDSVLMVFVTIHDRTCVDLLGLAVLG
Ga0311338_100440696	3300030007	Palsa	LQAPGTVVRCRTCDSVLMVFVTVHERTCVDLQGLAALG
Ga0311338_110919742	3300030007	Palsa	SRVAELAVHQVTMGAVVCCRACASALMVFVQVRGIHCVDLWGLASLG
Ga0302306_103960171	3300030043	Palsa	GTVVRCRGCGSVLMVFVRVRGVICVDTEGLASLTPA
Ga0311357_106223622	3300030524	Palsa	APGTVVRCRTCDSVLMVLVRRKDVTSVDLSGLADLSQR
Ga0311355_1000726114	3300030580	Palsa	ALGTVVRCRSCDSVLMVFVKIHDRTCVDLLGLATLG
Ga0318516_103672231	3300031543	Soil	YRPDLGIVVRCRSCDSVLMVFATVRGVTCVDLMGVASMT
Ga0318534_100462241	3300031544	Soil	AVYRPRLGTVVRCRVCDNVLMVFVEVRGVHCVDLHGLASMS
Ga0318534_105973421	3300031544	Soil	VYLRAPGTVVRCRACTRVLMVFVGVRGRNCVDLTGLAALEVV
Ga0318555_103415982	3300031640	Soil	YMPGLGIVVRCRSCQSVLMVFTGVRQVTCVDLMGLASLG
Ga0318555_104295161	3300031640	Soil	MPGQVAEFAVYRPGLGTVVRCRVCDNALMVFVEAHGVTCVDLQGLASLS
Ga0318572_102607852	3300031681	Soil	YIPGLGIVVRCRSCESVLMVFTGVRQVTCVDLMGLASLG
Ga0318560_102716281	3300031682	Soil	LGTVVRCRKCDNVLMVFVEVRGVTCVDLWGLAQLA
Ga0310686_1065669635	3300031708	Soil	MVYLDAPGTVVRCRHCESVLMVFVRAYGRGCVDLRGLAALEVR
Ga0307474_104398981	3300031718	Hardwood Forest Soil	APGTIVRCRTCDNVLMAFVTVHDRMCVDLQGLAVLG
Ga0318502_102322142	3300031747	Soil	RPDLGTVVRCRHCDNVLMVLVQMHGVTCVDTRGLASLS
Ga0307477_108346362	3300031753	Hardwood Forest Soil	PKLGTVVRCRVCDNVLMVFVEVRGVTCVDLHGLAQLA
Ga0307475_107043552	3300031754	Hardwood Forest Soil	YRSELGSVVRCRVCDNVLMVFVAIHGVTCVDLRGLASLS
Ga0318554_100629813	3300031765	Soil	AELAVYRPDLGTVVRCRHCDNVLMVLVQMHGVTCVDTRGLASLS
Ga0318554_103536301	3300031765	Soil	VYRPGLGTVVRCRACGAVLMAFVRIHNVTCVDLQGLASLT
Ga0318566_101309583	3300031779	Soil	YRPGLGTVVRCRACGAVLMAFVRIHNVTCVDLQGLASLT
Ga0318576_105597512	3300031796	Soil	PQEPHLPVAELAVYRPELGTVVRCRHCDNVLMVFVQIRGITCVDMRGLASLT
Ga0318497_105338033	3300031805	Soil	PGLGTVARCRSCESVLMVFTEVHRVTCVDLMGLASLAQGPS
Ga0318567_108317442	3300031821	Soil	LGTVARCRVCDNTLMVFVEVRGVTCVDLRGLAQLA
Ga0307478_114638602	3300031823	Hardwood Forest Soil	SGPVAGLAVYAQGPGTVVRCPACDSVLMVFVTMHSLVCVDLSGLASLGQGGD
Ga0310917_109960302	3300031833	Soil	YRQAPGTVVRCRTCGSVLMVFVTRHGVTGVDLPGLASLSPPG
Ga0318527_101162702	3300031859	Soil	GQVAELAVYRPGLGTVVRCRHCDNVLMVFVQIRGITCVDMRGLASLT
Ga0318527_102548542	3300031859	Soil	AVYQPKLGTVVRCRACDNVLMVFVQVRGVTCVDLRGLAQLA
Ga0306925_111246803	3300031890	Soil	GTVARCRSCESVLMVFTEVHRVTCVDLMGLASLAQGPS
Ga0310910_113598252	3300031946	Soil	LGIVVRCRSCESVLMVFTGVRQVTCVDLMGLASLG
Ga0318530_103530281	3300031959	Soil	APGTVVRCRTCGSVLMVFVTRHGVTGVDLPGLASLSPPG
Ga0307479_106676371	3300031962	Hardwood Forest Soil	PGTVVRCRTCGSVLMVFVKAYGVTCVDLSGLASLDQL
Ga0308176_128544262	3300031996	Soil	MEAVDGNAIRCRSCGSVLMVFVTIHDRTCVDLTGLAALG
Ga0311301_102341571	3300032160	Peatlands Soil	YRSALGTVVRCRACDAVLMTFVQIHGVTCVDLQGLASLA
Ga0311301_104190651	3300032160	Peatlands Soil	ALGTIVRCRSCDAVLMAFVQIHSVTCVDLQGLASLT
Ga0311301_114436521	3300032160	Peatlands Soil	AVYQPGLGTVVRCRHCESVLMVFVRARGVTCVDLWGLASLA
Ga0311301_116947451	3300032160	Peatlands Soil	VYRSALGTVVRCRTCDAVLMTFVQIHGVTCVDLQGLASLA
Ga0335078_116749961	3300032805	Soil	RPGLGTVVRCRSCDNALMVFVQIRGVTCVDLRGLAQLA
Ga0335080_123562321	3300032828	Soil	AVYLRAPGTVVRCPSCGSVLMTFVQVHEVWSVDMRGLAELEL
Ga0335074_102403511	3300032895	Soil	QAPGTVVRCRSCDSVLMVLVKTHEQTCVDLLGLAALG
Ga0335075_112088141	3300032896	Soil	LRAPGTVVRCRSCGSVLMVFVTIHDRTCVDLMGLAALG
Ga0335083_103961862	3300032954	Soil	VAELAVYQPGLGTVVRCRSCDAVLMAFVRIHDVTCVDLAGLASLT
Ga0335073_111194251	3300033134	Soil	VYAHAPGTVVRCPSCDSVLMVFVTMHDRTCVDLMGLAALG
Ga0310914_118341472	3300033289	Soil	VVYGRAPGTVVRCRSCGAILMVFTHVHDVICVDLAGLAELG
Ga0214472_106585681	3300033407	Soil	PGTVVRCRSCSSVLIVIVDVRGTNCVDLRGLADLER
Ga0310811_109595182	3300033475	Soil	PVAGLAVYRLAPGTVVRCPNCDSVLMAFVQAHSLVCVDLSGLASLG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign