Metagenome / Metatranscriptome Family F041502

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041502
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	46 residues
Representative Sequence	MRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Number of Associated Samples	130
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.50 %
% of genes near scaffold ends (potentially truncated)	25.62 %
% of genes from short scaffolds (< 2000 bps)	88.12 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (34.375 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (40.625 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.48% β-sheet: 0.00% Coil/Unstructured: 53.52%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF01795	Methyltransf_5	53.12
PF02381	MraZ	33.12
PF14279	HNH_5	8.75
PF07726	AAA_3	1.88
PF03717	PBP_dimer	0.62
PF00478	IMPDH	0.62
PF14579	HHH_6	0.62
PF01844	HNH	0.62
PF08245	Mur_ligase_M	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0275	16S rRNA C1402 N4-methylase RsmH	Translation, ribosomal structure and biogenesis [J]	53.12
COG2001	MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity	Translation, ribosomal structure and biogenesis [J]	33.12
COG0768	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	Cell cycle control, cell division, chromosome partitioning [D]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.50 %
Unclassified	root	N/A	2.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.50 %
Unclassified	root	N/A	2.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.50 %
Unclassified	root	N/A	2.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.50 %
Unclassified	root	N/A	2.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	71.25 %
Unclassified	root	N/A	2.50 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.25 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.62 %
Unclassified	root	N/A	2.50 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	32.50 %
Unclassified	root	N/A	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.25 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.62 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.50 %
Unclassified	root	N/A	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.25 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.62 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_176951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0849761	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300000443\|F12B_10078509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2287	Open in IMG/M
3300000550\|F24TB_10930553	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300000858\|JGI10213J12805_10581994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300000858\|JGI10213J12805_10966396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300000955\|JGI1027J12803_101988247	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300001431\|F14TB_100116199	Not Available	514	Open in IMG/M
3300004114\|Ga0062593_102798526	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300004463\|Ga0063356_106259681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300005161\|Ga0066807_1001660	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300005406\|Ga0070703_10126050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	935	Open in IMG/M
3300005471\|Ga0070698_100198827	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300006058\|Ga0075432_10295448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300006572\|Ga0074051_10014905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3602	Open in IMG/M
3300006576\|Ga0074047_12056480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300006844\|Ga0075428_100274600	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300006845\|Ga0075421_100020835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8241	Open in IMG/M
3300006845\|Ga0075421_102688134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300006847\|Ga0075431_100219386	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300006853\|Ga0075420_100485061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1068	Open in IMG/M
3300006865\|Ga0073934_10034625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4745	Open in IMG/M
3300006880\|Ga0075429_100247609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	1560	Open in IMG/M
3300006880\|Ga0075429_101039903	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300009100\|Ga0075418_10027663	All Organisms → cellular organisms → Bacteria	6194	Open in IMG/M
3300009146\|Ga0105091_10063931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1650	Open in IMG/M
3300009147\|Ga0114129_11364409	Not Available	876	Open in IMG/M
3300009157\|Ga0105092_10544714	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300009157\|Ga0105092_10629562	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300009168\|Ga0105104_10052862	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300009168\|Ga0105104_10286252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M
3300009801\|Ga0105056_1039908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300009804\|Ga0105063_1039588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300009810\|Ga0105088_1020182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1039	Open in IMG/M
3300009810\|Ga0105088_1022598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300009811\|Ga0105084_1004812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1875	Open in IMG/M
3300009811\|Ga0105084_1093502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300009814\|Ga0105082_1024590	Not Available	931	Open in IMG/M
3300009816\|Ga0105076_1073405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300009817\|Ga0105062_1007030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1690	Open in IMG/M
3300009818\|Ga0105072_1006529	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300009823\|Ga0105078_1002782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1602	Open in IMG/M
3300010029\|Ga0105074_1034913	Not Available	865	Open in IMG/M
3300010041\|Ga0126312_10716182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300010166\|Ga0126306_10464527	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300010375\|Ga0105239_10749316	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300011000\|Ga0138513_100006953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1323	Open in IMG/M
3300011405\|Ga0137340_1114462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300011439\|Ga0137432_1148391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300011444\|Ga0137463_1105997	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012159\|Ga0137344_1027214	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300012204\|Ga0137374_10240810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1524	Open in IMG/M
3300012204\|Ga0137374_10624494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300012353\|Ga0137367_11093036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300012355\|Ga0137369_10106170	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300012355\|Ga0137369_10165711	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300012360\|Ga0137375_10919238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300012532\|Ga0137373_10307964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300012937\|Ga0162653_100021352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300015258\|Ga0180093_1132751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300017965\|Ga0190266_10175889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300017997\|Ga0184610_1023900	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300017997\|Ga0184610_1031104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1498	Open in IMG/M
3300017997\|Ga0184610_1071587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300018028\|Ga0184608_10000255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13690	Open in IMG/M
3300018028\|Ga0184608_10501904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300018031\|Ga0184634_10049720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1729	Open in IMG/M
3300018031\|Ga0184634_10067410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1514	Open in IMG/M
3300018051\|Ga0184620_10022843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1574	Open in IMG/M
3300018052\|Ga0184638_1229156	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300018056\|Ga0184623_10068994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1625	Open in IMG/M
3300018063\|Ga0184637_10109661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1700	Open in IMG/M
3300018071\|Ga0184618_10048227	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300018072\|Ga0184635_10036183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1873	Open in IMG/M
3300018072\|Ga0184635_10099197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300018073\|Ga0184624_10045198	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300018073\|Ga0184624_10380579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300018074\|Ga0184640_10062879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1557	Open in IMG/M
3300018076\|Ga0184609_10103174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1283	Open in IMG/M
3300018078\|Ga0184612_10503330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300018079\|Ga0184627_10031210	All Organisms → cellular organisms → Bacteria	2687	Open in IMG/M
3300018081\|Ga0184625_10078415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1688	Open in IMG/M
3300018081\|Ga0184625_10304710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300018081\|Ga0184625_10344662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300018084\|Ga0184629_10096630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300018465\|Ga0190269_10065667	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300018465\|Ga0190269_10073982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1615	Open in IMG/M
3300018465\|Ga0190269_10825576	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300018466\|Ga0190268_11700331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300018469\|Ga0190270_10142673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1929	Open in IMG/M
3300018469\|Ga0190270_10260492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1516	Open in IMG/M
3300018469\|Ga0190270_10542211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300018469\|Ga0190270_11064813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300018469\|Ga0190270_12751817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300018476\|Ga0190274_11969448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300018481\|Ga0190271_10563611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1256	Open in IMG/M
3300019259\|Ga0184646_1054436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300019259\|Ga0184646_1386043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300019263\|Ga0184647_1347758	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300019884\|Ga0193741_1051145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1066	Open in IMG/M
3300020003\|Ga0193739_1015184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2013	Open in IMG/M
3300020003\|Ga0193739_1016681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1915	Open in IMG/M
3300020005\|Ga0193697_1026885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1435	Open in IMG/M
3300020005\|Ga0193697_1147659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300020009\|Ga0193740_1053897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300020016\|Ga0193696_1018343	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300020020\|Ga0193738_1013328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2653	Open in IMG/M
3300020020\|Ga0193738_1100938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300021412\|Ga0193736_1066075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300021972\|Ga0193737_1007601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1460	Open in IMG/M
3300022195\|Ga0222625_1612926	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300022534\|Ga0224452_1187940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300022694\|Ga0222623_10028624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2106	Open in IMG/M
3300025310\|Ga0209172_10114596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1524	Open in IMG/M
3300025310\|Ga0209172_10163666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1206	Open in IMG/M
3300025910\|Ga0207684_10505312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300025925\|Ga0207650_10059052	All Organisms → cellular organisms → Bacteria	2858	Open in IMG/M
3300025961\|Ga0207712_11565468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300026535\|Ga0256867_10244861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300026763\|Ga0207568_105082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300027006\|Ga0209896_1006886	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300027056\|Ga0209879_1043284	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300027277\|Ga0209846_1001633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3932	Open in IMG/M
3300027324\|Ga0209845_1010923	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300027379\|Ga0209842_1078150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300027523\|Ga0208890_1000002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26757	Open in IMG/M
3300027577\|Ga0209874_1041913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1216	Open in IMG/M
3300027650\|Ga0256866_1007253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2736	Open in IMG/M
3300027657\|Ga0256865_1162321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300027675\|Ga0209077_1068414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	974	Open in IMG/M
3300027695\|Ga0209966_1122802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300027722\|Ga0209819_10205923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300027743\|Ga0209593_10037196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1906	Open in IMG/M
3300027909\|Ga0209382_10528385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1295	Open in IMG/M
3300027961\|Ga0209853_1006714	All Organisms → cellular organisms → Bacteria	3569	Open in IMG/M
3300028380\|Ga0268265_12591276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300028596\|Ga0247821_10743179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300028707\|Ga0307291_1042132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1088	Open in IMG/M
3300028715\|Ga0307313_10076784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300028717\|Ga0307298_10178979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300028771\|Ga0307320_10018075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2537	Open in IMG/M
3300028771\|Ga0307320_10478334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300028784\|Ga0307282_10638339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300028791\|Ga0307290_10224062	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300028799\|Ga0307284_10166683	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300028878\|Ga0307278_10089823	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300030006\|Ga0299907_10000340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21846	Open in IMG/M
3300030336\|Ga0247826_11607079	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300030592\|Ga0247612_1149391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300030600\|Ga0247659_1144882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300031114\|Ga0308187_10396235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300031170\|Ga0307498_10332405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300031198\|Ga0307500_10140541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300031854\|Ga0310904_11074150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300031892\|Ga0310893_10092502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1095	Open in IMG/M
3300032012\|Ga0310902_10257383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1055	Open in IMG/M
3300034113\|Ga0364937_011184	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300034115\|Ga0364945_0182078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300034115\|Ga0364945_0236994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300034643\|Ga0370545_063942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.38%
Host-Associated	Host-Associated	10.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.62%
Aquatic	Environmental → Aquatic	28.75%
Plants	Host-Associated → Plants	10.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.50%
Sediment	Environmental → Aquatic → Sediment	19.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.75%
Freshwater	Environmental → Aquatic → Freshwater	7.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.88%
Floodplain	Environmental → Terrestrial → Floodplain	1.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.88%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	19.38%
Sand	Environmental → Terrestrial → Soil → Sand	11.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.12%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.50%
Loam	Environmental → Terrestrial → Soil → Loam	3.75%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	19.38%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	11.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.88%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.25%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	15.00%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	11.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.12%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.25%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.25%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020009	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026763	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-12 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030592	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030600	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_03007450	2199352025	Soil	MSKEGLRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
ICChiseqgaiiDRAFT_08497612	3300000033	Soil	MKPRASKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG*
F12B_100785092	3300000443	Soil	MTPRASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLAAHLLG*
F24TB_109305532	3300000550	Soil	MNKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG*
JGI10213J12805_105819942	3300000858	Soil	MSQGMKQRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
JGI10213J12805_109663962	3300000858	Soil	MKRGTSKEALRGELRQSLWLIAMTAATAATFLGFGLLTAHLLG*
JGI1027J12803_1019882472	3300000955	Soil	MKPRASKEALRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG*
F14TB_1001161992	3300001431	Soil	MTPRASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG*
Ga0062593_1027985262	3300004114	Soil	MKRGTSKEALRGEFRQSLSLIAMTAAAAATFLGFGLLTAHLLG*
Ga0063356_1062596812	3300004463	Arabidopsis Thaliana Rhizosphere	MSKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG*
Ga0066807_10016603	3300005161	Soil	MKQRASKKALRGELRQSLSLIAMTAATAATFLGLGLLTAHLLG*
Ga0070703_101260502	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTPRASKESLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG*
Ga0070698_1001988272	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKPRASKGPLRAELRQRLSLISMTAVTAATFHGLGLLTAHLLG*
Ga0075432_102954481	3300006058	Populus Rhizosphere	KPMSKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG*
Ga0074051_100149052	3300006572	Soil	MKQRASKEALRGELRQSLSLIAMTAATAATFLGLGLLTAHLLG*
Ga0074047_120564802	3300006576	Soil	MKQMASREGLRGELRQSLSLITMTAVTAATFLGLGLLTAHLLG*
Ga0075428_1002746001	3300006844	Populus Rhizosphere	GRLPGRHARTGGQGMSQGMSQGMSQGMSQGMSQGMRQRTTKGTLRGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0075421_1000208352	3300006845	Populus Rhizosphere	MSQGMSQGMSQGTSHMTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0075421_1026881342	3300006845	Populus Rhizosphere	MKPRASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLAAHLLG*
Ga0075431_1002193862	3300006847	Populus Rhizosphere	MSQGMSQGMRQRTTKGTLRGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0075420_1004850613	3300006853	Populus Rhizosphere	MSQGTSHMTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0073934_100346256	3300006865	Hot Spring Sediment	MSQGMSQGMSQGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0075429_1002476092	3300006880	Populus Rhizosphere	MSQGMRQRTTKGTLPGELRQSLQLIAMTALTAATFLGLGLFTAHLLG*
Ga0075429_1010399032	3300006880	Populus Rhizosphere	MKPRASKEPLRGELRQSLSLIAMTAVTAATFLGLGLVTAHLLG*
Ga0075418_100276636	3300009100	Populus Rhizosphere	MTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0105091_100639311	3300009146	Freshwater Sediment	GQGMSQGMSQGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0114129_113644092	3300009147	Populus Rhizosphere	QGMRQRTTKGTLPGELRQSLQLIAMTALTAATFLGLGLFTAHLLS*
Ga0105092_105447142	3300009157	Freshwater Sediment	MRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0105092_106295622	3300009157	Freshwater Sediment	MRQRTTKGTLSGELRQSLSLIAMTALTAATFLGLGLITARLLG*
Ga0105104_100528622	3300009168	Freshwater Sediment	MRQRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0105104_102862522	3300009168	Freshwater Sediment	MKPRASKEPLRGELRQSLSLIAMTAMTAATFLGLGLLTAHLLG*
Ga0105056_10399082	3300009801	Groundwater Sand	MKPRASKEALRGELRQSLSLIAMTAVTAATFLGLGLLAAHLLG*
Ga0105063_10395882	3300009804	Groundwater Sand	MNQRRTKGTLPGELRQSLALIAMTALTAASFLGLGLITAHLLG*
Ga0105088_10201823	3300009810	Groundwater Sand	MRQRMTKGTLPGELRQSLSMIAMTALTAATFLGLGLITAHLLG*
Ga0105088_10225982	3300009810	Groundwater Sand	KHAVRGGLGRTLSPIAMTAVTASVFLGLGPLTAHLPG*
Ga0105084_10048123	3300009811	Groundwater Sand	MRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAQLLG*
Ga0105084_10935022	3300009811	Groundwater Sand	MKRTSKEALRGELRQSLWLIAMTAATAATFLGFGLLTAHLLG*
Ga0105082_10245901	3300009814	Groundwater Sand	GRNARTGGQGMSQGMNQRRTKGTLPGELRQSLSLIAMTALTAASFPGLGLITAHLLG*
Ga0105076_10734052	3300009816	Groundwater Sand	MRQRMTKGTLPGELRQSLSLIAMTALTAASFPGLGLITAHLLG*
Ga0105062_10070303	3300009817	Groundwater Sand	MKRGTSKEAQRSELRQSLSLIAMTAAAVIAFLGFGPLTAHLLG*
Ga0105072_10065292	3300009818	Groundwater Sand	MSQGTTKGTLPGELRQSLSLIAMTALTAASFLGLGLITAHLLG*
Ga0105078_10027822	3300009823	Groundwater Sand	MKPRASKEALRGELRQSLWLIAMTAATAATFLGFGLLTAHLLG*
Ga0105074_10349131	3300010029	Groundwater Sand	SQEMSQEMSQETRQRMTKGTLSGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0126312_107161822	3300010041	Serpentine Soil	MNQGMGTGTTQAPLRGELRQSLSLIAMTAVTAATFLGLGLITAHLLG*
Ga0126306_104645272	3300010166	Serpentine Soil	MSQRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0105239_107493162	3300010375	Corn Rhizosphere	MSKEALRGELRQSLSLIVMTAVTAAMFLGLGLLTAHLLG*
Ga0138513_1000069534	3300011000	Soil	MKPRASKEPLRGELCQSLSLIAMTAVTAATFLGLGLLTAHLLG*
Ga0137340_11144622	3300011405	Soil	MSQGTKQRMREGTLPGELRQSLSLIAMTALAAATFLGLGLITAHLLG*
Ga0137432_11483912	3300011439	Soil	MEQRMRQGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0137463_11059972	3300011444	Soil	MSKEALRGELRQSLSLIVMTAVTAATFLGIGLLTAHLLG*
Ga0137344_10272141	3300012159	Soil	GTKQRMREGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0137374_102408102	3300012204	Vadose Zone Soil	MKPGASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG*
Ga0137374_106244941	3300012204	Vadose Zone Soil	MKQKVCKEALRGELRRSLSLIRMTAVTVATFLGLGVLTAHVLG*
Ga0137367_110930362	3300012353	Vadose Zone Soil	MKQKVCKEALRGELRQSLSLIGMTAVTAATFLGLGVLTAHLLG*
Ga0137369_101061704	3300012355	Vadose Zone Soil	MSKEALRGELRQSLSLIVVTAATAATFLGLGLLTAHLLG*
Ga0137369_101657112	3300012355	Vadose Zone Soil	MKPRASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG*
Ga0137375_109192382	3300012360	Vadose Zone Soil	MSREALRGELRQSLSLIVVTAATAATFLGLGLLTAHLLG
Ga0137373_103079642	3300012532	Vadose Zone Soil	MKQKVSKEALRGELRQSLSLIGMTAVTAATFLGLGVLTAHLLG*
Ga0162653_1000213522	3300012937	Soil	MKRGTSKEALHGEPRQSLSLIAMAAVTAATFLGFGLLTARLLG*
Ga0180093_11327511	3300015258	Soil	GMSQRMTKVTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG*
Ga0190266_101758891	3300017965	Soil	MSQGMSQGMSQGMSQGMSQGMSQRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184610_10239003	3300017997	Groundwater Sediment	MKPRASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0184610_10311042	3300017997	Groundwater Sediment	MSQGMQQRMTKGTLPGELSQSLSLIAMTALTAATFLGLGLISAQLLG
Ga0184610_10715872	3300017997	Groundwater Sediment	MSQGTKQRMREGTLPGELRQSLSLIAMTAMTAATFLGLGLITAHLLG
Ga0184608_100002553	3300018028	Groundwater Sediment	MSQGMSQGMSQGMSQGVSQGVRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184608_105019042	3300018028	Groundwater Sediment	MKRGTSKEALRGELRQSLSLIAMTAAAAATFLGFGLLTA
Ga0184634_100497203	3300018031	Groundwater Sediment	LSQEVRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184634_100674103	3300018031	Groundwater Sediment	MKPGASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0184620_100228433	3300018051	Groundwater Sediment	MKPRASKEPLRGELRQSLSLIAMAAVTAATFLGFGLLTARLLG
Ga0184638_12291562	3300018052	Groundwater Sediment	MSQGMSQGIGMRQRMTKGTLPGELRQSLSLIAMTALTAAMFLGLGLITAHLLG
Ga0184623_100689943	3300018056	Groundwater Sediment	MSQGMQQRMTKGTLPGELSQGLSLIAMTALTAATFLGLGLISAQLLG
Ga0184637_101096612	3300018063	Groundwater Sediment	MSQGMSQGMSQGMSQGMSQGMSQGIGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184618_100482272	3300018071	Groundwater Sediment	MKPGASKEALRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0184635_100361832	3300018072	Groundwater Sediment	MSQGIGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184635_100991971	3300018072	Groundwater Sediment	MKPGASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHL
Ga0184624_100451982	3300018073	Groundwater Sediment	MKRGTSKEALHGEPRQSLSLIAMAAVTAATFLGFGLLTARLLG
Ga0184624_103805792	3300018073	Groundwater Sediment	MSKEALRGELRQSLSLIVMTAVTAATFLGFGLLTARLLG
Ga0184640_100628793	3300018074	Groundwater Sediment	MSQGMSQGIGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184609_101031742	3300018076	Groundwater Sediment	MKPGASKAPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0184612_105033302	3300018078	Groundwater Sediment	MSQGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184627_100312104	3300018079	Groundwater Sediment	MSQGTKQRMRKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184625_100784152	3300018081	Groundwater Sediment	MKQRGTSKEALHGEPRQSLSLIAMAAVTAATFLGFGLLTARLLG
Ga0184625_103047101	3300018081	Groundwater Sediment	MSQGMSQGIGMRQRMTKGTLPGELSQSLSLIAMTALTADTFLGLGLISAQLL
Ga0184625_103446621	3300018081	Groundwater Sediment	QGMSQGMQQRIPKGTLPGELSQSLSLIAMTAATFLGLGLISAQLLG
Ga0184629_100966302	3300018084	Groundwater Sediment	MSQGMSQGMSQGVRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0190269_100656672	3300018465	Soil	MSEGMQERMTKGTLSGELRQSLSLIAMTALTAGTFLGLGLITAQLLG
Ga0190269_100739822	3300018465	Soil	MKRRASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0190269_108255762	3300018465	Soil	MKRGTSKEAQRGELRQSLSLIAMTAAAAATFLGFGPLTAHLLG
Ga0190268_117003312	3300018466	Soil	MKERTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0190270_101426732	3300018469	Soil	MKPSASKEPLRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0190270_102604923	3300018469	Soil	MSQGTSQGMSQGTSQGTSQGTSQGMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITARLLG
Ga0190270_105422111	3300018469	Soil	MSQGMSQGMSQGMTKGTLPGELRQSLSLIAMTALTAATFMGLGLITARMLR
Ga0190270_110648132	3300018469	Soil	MTKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAYLLG
Ga0190270_127518172	3300018469	Soil	MSEGMQERMTKGTLSGELRQSLSLIAMTALTAGTFLGLGLTTAQLLG
Ga0190274_119694482	3300018476	Soil	MSQGMSQRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITARLLG
Ga0190271_105636112	3300018481	Soil	MSQGMSQGMSQGMRQRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184646_10544362	3300019259	Groundwater Sediment	QGMSQGMSQGMRQRMTKGTLPRELGQSLSLIAMTGLTAATFLGLGLITAHLLG
Ga0184646_13860431	3300019259	Groundwater Sediment	MSQGMSQGMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0184647_13477582	3300019263	Groundwater Sediment	MNKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0193741_10511452	3300019884	Soil	EPRDEPRDEGMKGRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0193739_10151842	3300020003	Soil	MSQGMSQGMSQGMSQGIGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITARLL
Ga0193739_10166812	3300020003	Soil	MSQGMKQRMTNRTLPGELRQSFSLIAMTALTAATFLGLGLITAHLLG
Ga0193697_10268851	3300020005	Soil	ARTGGQGMSQGMQQRMTKGTLAGELSQSLSLIAMTALTAATFLGLGLISAQLLG
Ga0193697_11476591	3300020005	Soil	ARTGGKGMKRGTSKEALHGEPRQSLSLIAMAAVTAATFLGFGLLTARLLG
Ga0193740_10538971	3300020009	Soil	TKGTLPRELGQSLSLIAMTGLTAATFLGLGLITAHLLG
Ga0193696_10183432	3300020016	Soil	MSKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0193738_10133284	3300020020	Soil	MTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0193738_11009381	3300020020	Soil	HARTGGQGMSQGIGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITARLLG
Ga0193736_10660752	3300021412	Soil	MSQGMSQGIGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITARL
Ga0193737_10076013	3300021972	Soil	QGIGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITARLLG
Ga0222625_16129262	3300022195	Groundwater Sediment	MSQGMSQKMTNGRLPRELGQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0224452_11879402	3300022534	Groundwater Sediment	MSQGMSQGVRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0222623_100286242	3300022694	Groundwater Sediment	MSQGMQQRIPKGTLPGELSQSLSLIAMTALTAATFLGLGLISAQLLG
Ga0209172_101145962	3300025310	Hot Spring Sediment	VKGSLSTEVRQSLSLIAMTAVATATYLGLALLLAHVLG
Ga0209172_101636662	3300025310	Hot Spring Sediment	MSQGMSQGMSQGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0207684_105053122	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EGKPMSKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0207650_100590522	3300025925	Switchgrass Rhizosphere	MTPRASKESLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0207712_115654682	3300025961	Switchgrass Rhizosphere	MKPRASKEPLHGELRQSLSLIAMTAVTAATFLGLGLLAAHLLG
Ga0256867_102448612	3300026535	Soil	MSQGMSQGMKGRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0207568_1050821	3300026763	Soil	MKPRASKEPLRGELRQSLSLIAMTAMTAATFLGLGLLTAHLLG
Ga0209896_10068862	3300027006	Groundwater Sand	MKPRASKEALRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0209879_10432842	3300027056	Groundwater Sand	MKRTSKEALRGELRQSLWLIAMTAATAATFLGFGLLTAHLLG
Ga0209846_10016335	3300027277	Groundwater Sand	MSQGMRQRMTKGTLPGELRQSLSMIAMTALTAATFLGLGLITAHLLG
Ga0209845_10109232	3300027324	Groundwater Sand	MTKGTLPGELRQSLSMIAMTALTAATFLGLGLITAHLLG
Ga0209842_10781502	3300027379	Groundwater Sand	MKRGTSKEAQRSELRQSLSLIAMTAAAAAAFLGFGPLTAHLLG
Ga0208890_100000217	3300027523	Soil	MKQRASKEALRGELRQSLSLIAMTAATAATFLGLGLLTAHLLG
Ga0209874_10419131	3300027577	Groundwater Sand	MSQGMRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHL
Ga0256866_10072534	3300027650	Soil	MSQGMKGRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0256865_11623212	3300027657	Soil	MSQGMSQGMSQGMSQRMTKGTLPRELGQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0209077_10684141	3300027675	Freshwater Sediment	GQGMSQGMSQGMSQGMSQRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0209966_11228021	3300027695	Arabidopsis Thaliana Rhizosphere	MKPRAGKEALRGELRQSLSLIAMTAVTAATFLGLGLVTAHLL
Ga0209819_102059232	3300027722	Freshwater Sediment	MKRGTSKEALRGELRQSLWLIAMTAATAATFLGFGLLTAHLLG
Ga0209593_100371964	3300027743	Freshwater Sediment	MSQGMSQGMSQGMSQGMSQGMRQRTTKGTLPGELRQSLSLIAVIALTAATFLGLGLITAHLLG
Ga0209382_105283853	3300027909	Populus Rhizosphere	MSQGMSQGMRQRTTKGTLRGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0209853_10067142	3300027961	Groundwater Sand	MRRRVSKHAVRGGLRRTLSPIAMTAVTASVFLGLGPLTAHLLG
Ga0268265_125912762	3300028380	Switchgrass Rhizosphere	ALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0247821_107431792	3300028596	Soil	MSKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAYLLG
Ga0307291_10421322	3300028707	Soil	GMKPGASKAPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0307313_100767842	3300028715	Soil	KPRASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0307298_101789791	3300028717	Soil	ASKEPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0307320_100180752	3300028771	Soil	MKQKASREALSGELRQSLSLIAVTAVTASTFLGLGLLTAHLLG
Ga0307320_104783341	3300028771	Soil	MSQGMSQGMSQGMSQGVSQGVRQRMTKGTLPGELRQSLSLIAMTALTAATFL
Ga0307282_106383392	3300028784	Soil	MSKEALRGELRQSLSLIVMTAVTAATFLGIGLLTAHLLG
Ga0307290_102240622	3300028791	Soil	MSQGMSQGVRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHL
Ga0307284_101666832	3300028799	Soil	MKQRASKEALRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0307278_100898232	3300028878	Soil	MKPRASKAPLRGELRQSLSLIAMTAVTAATFLGLGLLTAHLLG
Ga0299907_1000034019	3300030006	Soil	MSQGMSQGMSQGMKGRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0247826_116070792	3300030336	Soil	MKPRASKEALRGELRQSLSLIAMTAVTAATFLGLGLVTAHLLG
Ga0247612_11493912	3300030592	Soil	TTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0247659_11448822	3300030600	Soil	GMSQGMSQRTTKGTLPGELRQSLSLIAMTALTAATFLGLGLITARLLG
Ga0308187_103962351	3300031114	Soil	MKPGASKAPLRGELRQSLSLIAMTAVTAATFLGLG
Ga0307498_103324052	3300031170	Soil	RDEGMPMNKGALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0307500_101405411	3300031198	Soil	RPMNKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0310904_110741501	3300031854	Soil	RSHPEPRDRPRDEPRDEPRDEEEAMSKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0310893_100925021	3300031892	Soil	KEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0310902_102573832	3300032012	Soil	AMSKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG
Ga0364937_011184_908_1039	3300034113	Sediment	MRQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0364945_0182078_313_516	3300034115	Sediment	MSEGMSEGMSQGMSEGMSEGMSQGMSQRMTKGTLPGELRQSLSLIAMTALTAATFLGLGLITAHLLG
Ga0364945_0236994_105_236	3300034115	Sediment	MRQRMTKGTLPGELRQSLSLIAITALTAATFLGLGLITAHLLG
Ga0370545_063942_151_270	3300034643	Soil	VSKEALRGELRQSLSLIVMTAVTAATFLGLGLLTAHLLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041502

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences