Metagenome / Metatranscriptome Family F041300

Basic Information
Family ID	F041300
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	58 residues
Representative Sequence	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDARHSGTPDD
Number of Associated Samples	138
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.60 %
% of genes near scaffold ends (potentially truncated)	45.00 %
% of genes from short scaffolds (< 2000 bps)	75.62 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Most Common Taxonomy
Group	Bacteria (53.750 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (6.875 % of family members)
Environment Ontology (ENVO)	Unclassified (30.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.625 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.19% β-sheet: 0.00% Coil/Unstructured: 48.81%
Feature Viewer

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Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF13458	Peripla_BP_6	27.50
PF03330	DPBB_1	5.00
PF01557	FAA_hydrolase	3.75
PF14026	DUF4242	2.50
PF00672	HAMP	1.88
PF02203	TarH	1.25
PF08241	Methyltransf_11	1.25
PF13356	Arm-DNA-bind_3	0.62
PF00486	Trans_reg_C	0.62
PF00027	cNMP_binding	0.62
PF00188	CAP	0.62
PF07885	Ion_trans_2	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	2.50
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.62

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.75 %
Unclassified	root	N/A	46.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.75 %
Unclassified	root	N/A	46.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.75 %
Unclassified	root	N/A	46.25 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.25 %
Unclassified	root	N/A	46.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.38 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.25 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.00 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.62 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.25 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.62 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.25 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.50 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.25 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.50 %
Rhodovulum euryhalinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → Rhodovulum euryhalinum	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0537649	Not Available	588	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104662764	Not Available	525	Open in IMG/M
3300000559\|F14TC_102491844	Not Available	1110	Open in IMG/M
3300000789\|JGI1027J11758_12718879	Not Available	658	Open in IMG/M
3300000955\|JGI1027J12803_104187079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300001976\|JGI24752J21851_1024630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	789	Open in IMG/M
3300001977\|JGI24746J21847_1001517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3697	Open in IMG/M
3300002155\|JGI24033J26618_1003500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1658	Open in IMG/M
3300002244\|JGI24742J22300_10018223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1190	Open in IMG/M
3300003324\|soilH2_10215342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2727	Open in IMG/M
3300003659\|JGI25404J52841_10094688	Not Available	625	Open in IMG/M
3300004058\|Ga0055498_10098635	Not Available	589	Open in IMG/M
3300004114\|Ga0062593_100232456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1504	Open in IMG/M
3300004114\|Ga0062593_103254500	Not Available	521	Open in IMG/M
3300004156\|Ga0062589_101992274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	589	Open in IMG/M
3300004463\|Ga0063356_104929859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300004643\|Ga0062591_101950874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	604	Open in IMG/M
3300005093\|Ga0062594_100238580	Not Available	1315	Open in IMG/M
3300005103\|Ga0066813_1009436	Not Available	583	Open in IMG/M
3300005158\|Ga0066816_1018653	Not Available	571	Open in IMG/M
3300005276\|Ga0065717_1006636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	786	Open in IMG/M
3300005290\|Ga0065712_10074125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4179	Open in IMG/M
3300005295\|Ga0065707_10793647	Not Available	602	Open in IMG/M
3300005328\|Ga0070676_10019281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3793	Open in IMG/M
3300005328\|Ga0070676_10528108	Not Available	842	Open in IMG/M
3300005329\|Ga0070683_100469758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1201	Open in IMG/M
3300005331\|Ga0070670_100023547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5301	Open in IMG/M
3300005332\|Ga0066388_100589214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1736	Open in IMG/M
3300005332\|Ga0066388_102710152	Not Available	904	Open in IMG/M
3300005332\|Ga0066388_104081005	Not Available	744	Open in IMG/M
3300005332\|Ga0066388_105906535	Not Available	619	Open in IMG/M
3300005332\|Ga0066388_107311776	Not Available	555	Open in IMG/M
3300005334\|Ga0068869_100031256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3745	Open in IMG/M
3300005335\|Ga0070666_10112012	Not Available	1888	Open in IMG/M
3300005336\|Ga0070680_100030045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4364	Open in IMG/M
3300005337\|Ga0070682_101318468	Not Available	614	Open in IMG/M
3300005339\|Ga0070660_100014038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5766	Open in IMG/M
3300005340\|Ga0070689_100440071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1108	Open in IMG/M
3300005354\|Ga0070675_100060210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3134	Open in IMG/M
3300005355\|Ga0070671_101233532	Not Available	659	Open in IMG/M
3300005356\|Ga0070674_100050584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2861	Open in IMG/M
3300005366\|Ga0070659_100187435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1699	Open in IMG/M
3300005367\|Ga0070667_100979400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	789	Open in IMG/M
3300005406\|Ga0070703_10068581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300005439\|Ga0070711_100038828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3203	Open in IMG/M
3300005444\|Ga0070694_100598629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	887	Open in IMG/M
3300005457\|Ga0070662_101956422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300005457\|Ga0070662_101964189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300005459\|Ga0068867_100734128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	874	Open in IMG/M
3300005471\|Ga0070698_100628232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1015	Open in IMG/M
3300005713\|Ga0066905_100475676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300005713\|Ga0066905_100839451	Not Available	799	Open in IMG/M
3300005764\|Ga0066903_100071648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4440	Open in IMG/M
3300005764\|Ga0066903_103328573	Not Available	868	Open in IMG/M
3300005764\|Ga0066903_108915095	Not Available	508	Open in IMG/M
3300005840\|Ga0068870_10037283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2505	Open in IMG/M
3300005937\|Ga0081455_10001414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29714	Open in IMG/M
3300005937\|Ga0081455_11056126	Not Available	502	Open in IMG/M
3300006047\|Ga0075024_100240929	Not Available	864	Open in IMG/M
3300006057\|Ga0075026_100079554	Not Available	1595	Open in IMG/M
3300006195\|Ga0075366_10529503	Not Available	729	Open in IMG/M
3300006572\|Ga0074051_11601599	Not Available	524	Open in IMG/M
3300006573\|Ga0074055_11780991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300006574\|Ga0074056_11357713	Not Available	509	Open in IMG/M
3300006575\|Ga0074053_11985884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1089	Open in IMG/M
3300006580\|Ga0074049_12955298	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300006581\|Ga0074048_13202076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1558	Open in IMG/M
3300006806\|Ga0079220_11773781	Not Available	542	Open in IMG/M
3300006847\|Ga0075431_100246668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1815	Open in IMG/M
3300006852\|Ga0075433_11712378	Not Available	541	Open in IMG/M
3300006854\|Ga0075425_101575932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	741	Open in IMG/M
3300007076\|Ga0075435_101859597	Not Available	528	Open in IMG/M
3300009094\|Ga0111539_10525739	Not Available	1378	Open in IMG/M
3300009176\|Ga0105242_11455660	Not Available	714	Open in IMG/M
3300010046\|Ga0126384_10611909	Not Available	955	Open in IMG/M
3300010047\|Ga0126382_10009319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4627	Open in IMG/M
3300010360\|Ga0126372_10198666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1667	Open in IMG/M
3300010362\|Ga0126377_10002153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13431	Open in IMG/M
3300010371\|Ga0134125_12016644	Not Available	627	Open in IMG/M
3300010396\|Ga0134126_12616865	Not Available	548	Open in IMG/M
3300010397\|Ga0134124_10585935	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300010399\|Ga0134127_10107241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2460	Open in IMG/M
3300010399\|Ga0134127_10205889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1833	Open in IMG/M
3300012502\|Ga0157347_1047991	Not Available	582	Open in IMG/M
3300012505\|Ga0157339_1009636	Not Available	857	Open in IMG/M
3300012897\|Ga0157285_10002146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3337	Open in IMG/M
3300012905\|Ga0157296_10002507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2465	Open in IMG/M
3300012914\|Ga0157297_10048939	Not Available	1098	Open in IMG/M
3300012948\|Ga0126375_10194125	Not Available	1326	Open in IMG/M
3300012951\|Ga0164300_10277564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300012955\|Ga0164298_10383059	Not Available	903	Open in IMG/M
3300012957\|Ga0164303_10041112	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300012957\|Ga0164303_10075689	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300012989\|Ga0164305_11560106	Not Available	588	Open in IMG/M
3300014325\|Ga0163163_11068117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300014326\|Ga0157380_10343049	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300015371\|Ga0132258_10098233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6887	Open in IMG/M
3300015371\|Ga0132258_12995146	Not Available	1171	Open in IMG/M
3300015371\|Ga0132258_13258010	Not Available	1118	Open in IMG/M
3300015371\|Ga0132258_13308763	Not Available	1109	Open in IMG/M
3300015372\|Ga0132256_100961518	Not Available	970	Open in IMG/M
3300015372\|Ga0132256_101519654	Not Available	780	Open in IMG/M
3300015374\|Ga0132255_101824561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	924	Open in IMG/M
3300017944\|Ga0187786_10004536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3196	Open in IMG/M
3300017966\|Ga0187776_10578872	Not Available	779	Open in IMG/M
3300017974\|Ga0187777_11298956	Not Available	534	Open in IMG/M
3300018031\|Ga0184634_10490409	Not Available	550	Open in IMG/M
3300018032\|Ga0187788_10000310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13257	Open in IMG/M
3300018032\|Ga0187788_10109312	Not Available	1007	Open in IMG/M
3300019362\|Ga0173479_10007435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2708	Open in IMG/M
3300022694\|Ga0222623_10137389	Not Available	952	Open in IMG/M
3300022880\|Ga0247792_1002007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2912	Open in IMG/M
3300022883\|Ga0247786_1001282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4629	Open in IMG/M
3300022889\|Ga0247785_1009197	Not Available	1008	Open in IMG/M
3300022892\|Ga0247753_1018742	Not Available	762	Open in IMG/M
3300022899\|Ga0247795_1001933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3480	Open in IMG/M
3300025885\|Ga0207653_10204385	Not Available	745	Open in IMG/M
3300025900\|Ga0207710_10191633	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300025900\|Ga0207710_10278467	Not Available	841	Open in IMG/M
3300025903\|Ga0207680_10319047	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300025912\|Ga0207707_10130469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2198	Open in IMG/M
3300025914\|Ga0207671_10360159	Not Available	1154	Open in IMG/M
3300025919\|Ga0207657_10013364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8055	Open in IMG/M
3300025920\|Ga0207649_10086223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2046	Open in IMG/M
3300025932\|Ga0207690_10537635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300025936\|Ga0207670_10140820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1779	Open in IMG/M
3300025981\|Ga0207640_10014653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4517	Open in IMG/M
3300025986\|Ga0207658_11871020	Not Available	547	Open in IMG/M
3300026041\|Ga0207639_10076315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2638	Open in IMG/M
3300026088\|Ga0207641_10501353	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300026717\|Ga0207526_101370	Not Available	721	Open in IMG/M
3300026828\|Ga0207502_104048	Not Available	709	Open in IMG/M
3300026853\|Ga0207443_1003518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → Rhodovulum euryhalinum	777	Open in IMG/M
3300027446\|Ga0207562_1003264	Not Available	678	Open in IMG/M
3300027483\|Ga0207637_1001539	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300027560\|Ga0207981_1010942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1620	Open in IMG/M
3300027617\|Ga0210002_1003125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2432	Open in IMG/M
3300027665\|Ga0209983_1022398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1324	Open in IMG/M
3300027717\|Ga0209998_10026880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258	Open in IMG/M
3300027876\|Ga0209974_10289331	Not Available	625	Open in IMG/M
3300027907\|Ga0207428_10167387	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300027993\|Ga0247749_1005090	Not Available	1193	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10014747	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300031446\|Ga0170820_10005826	Not Available	892	Open in IMG/M
3300031547\|Ga0310887_10016788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2818	Open in IMG/M
3300031562\|Ga0310886_10079360	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300031740\|Ga0307468_100175472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1415	Open in IMG/M
3300031847\|Ga0310907_10006179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3470	Open in IMG/M
3300031858\|Ga0310892_10634129	Not Available	727	Open in IMG/M
3300032174\|Ga0307470_10163889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1377	Open in IMG/M
3300032174\|Ga0307470_11860666	Not Available	511	Open in IMG/M
3300032180\|Ga0307471_100936397	Not Available	1034	Open in IMG/M
3300032828\|Ga0335080_11436186	Not Available	685	Open in IMG/M
3300033475\|Ga0310811_10619275	Not Available	1080	Open in IMG/M
3300034090\|Ga0326723_0551372	Not Available	531	Open in IMG/M
3300034090\|Ga0326723_0603441	Not Available	508	Open in IMG/M
3300034820\|Ga0373959_0001889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3343	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.88%
Host-Associated	Host-Associated	38.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.75%
Plants	Host-Associated → Plants	38.12%
Aquatic	Environmental → Aquatic	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.25%
Sediment	Environmental → Aquatic → Sediment	2.50%
Roots	Host-Associated → Plants → Roots	1.88%
Peat	Environmental → Terrestrial → Peat	1.25%
Marine	Environmental → Aquatic → Marine	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.75%
Loam	Environmental → Terrestrial → Soil → Loam	14.37%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.25%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.25%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.62%
Sand	Environmental → Terrestrial → Soil → Sand	0.62%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.62%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.12%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.12%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.50%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.25%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.25%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.25%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.62%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026717	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A2-12 (SPAdes)	Environmental	Open in IMG/M
3300026828	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-12 (SPAdes)	Environmental	Open in IMG/M
3300026853	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5w-12 (SPAdes)	Environmental	Open in IMG/M
3300027446	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A2a-10 (SPAdes)	Environmental	Open in IMG/M
3300027483	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A1-12 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_05376492	3300000033	Soil	VPPFSVVDYRRYAAECVRLAQRVEDPMDKARLLDMAETFRELADRNEEKNPREAED
INPhiseqgaiiFebDRAFT_1046627641	3300000364	Soil	MTRDQWTQTRILPLRAGEAWLPYFSAVDYRRYAAECVRLAQQVVDPDDKARLLDMTETFRELADKNDIRHARLPEG*PAGRALLS
F14TC_1024918442	3300000559	Soil	VPPFSVVDYRRYAAECVRLAQRVEDPMDKARLLDMAETFRELADRNQKKN
JGI1027J11758_127188792	3300000789	Soil	VPPFSVVDYRRYAAESVRLAQRVEDPMDKARLLDMAETFRELADRNEEKNPREAED*
JGI1027J12803_1041870791	3300000955	Soil	RASGVSVPPFSVVDYRRYAAECVRLAQRVEDPMDKARLLDMAETFRELADRNEEKNPREAED*
JGI24752J21851_10246301	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	VDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD*
JGI24746J21847_10015174	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	LPFFSAVDYRRYAAXCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD*
JGI24033J26618_10035003	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	SAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD*
JGI24742J22300_100182233	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	FFSAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD*
soilH2_102153423	3300003324	Sugarcane Root And Bulk Soil	LPLYSAIDYRRYAAECVRLAQQVADSEDKARLLDMAETFRELAEKSETKQNSGA*
JGI25404J52841_100946882	3300003659	Tabebuia Heterophylla Rhizosphere	VPPFSVVDYRRYAAECVRLAQRVEDPADKARLLDMAETFRELADRNEKKDLHDAED*
Ga0055498_100986352	3300004058	Natural And Restored Wetlands	LPFFSAVDYRRYAAECVRLAQEVADPDDKARLLDMAETFRELADKNNARHSGPPDD*
Ga0062593_1002324561	3300004114	Soil	VPLFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELAEKTDDKQSSSSGN*
Ga0062593_1032545001	3300004114	Soil	MRLLPLRVGEAWVPLFSAVDYLRYAAECVRLAQQVADPGDKARLLDMAETFREMAEKNHDKRSSSTGS*
Ga0062589_1019922742	3300004156	Soil	FSAVDYRRYAAECVRLAQQVADSEDKARLLDMAETFRELADKNDVRLTGRPEH*
Ga0062590_1020597212	3300004157	Soil	FSAIDYRRYAAECVRLAQSTSDPVDKARLLDMAETFSELADKSETRSRGNPGG*
Ga0063356_1049298592	3300004463	Arabidopsis Thaliana Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKDNLRHPAPPED*
Ga0062591_1019508742	3300004643	Soil	GWLPFFSAVDYRRYAAECVRLAQQVADSEDKARLLDMAETFRELADKNDVRLTGRPEH*
Ga0062594_1002385803	3300005093	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDGRYSGLPED*
Ga0066813_10094361	3300005103	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNNLRHPAPPKD*
Ga0066816_10186532	3300005158	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNNARHSGPPDD*
Ga0065717_10066363	3300005276	Arabidopsis Rhizosphere	NQWTRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0065712_100741252	3300005290	Miscanthus Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDVRHSGQPEN*
Ga0065707_107936471	3300005295	Switchgrass Rhizosphere	VPPFSVVDYRRYAAECVRLAQRVEDPMDKARLLDMAETFRELADRHEQNDPRDA
Ga0070676_100192816	3300005328	Miscanthus Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD*
Ga0070676_105281081	3300005328	Miscanthus Rhizosphere	MRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDLRHPAPPEG*
Ga0070683_1004697583	3300005329	Corn Rhizosphere	MWNQWTRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD*
Ga0070670_1000235476	3300005331	Switchgrass Rhizosphere	RRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDVRHSGQPEN*
Ga0070670_1000696711	3300005331	Switchgrass Rhizosphere	VSPFSAIDYRRYAAECVRLAQSTSDPVDKARLLDMAETFSELADKSETRSRGNPGG*
Ga0066388_1005892141	3300005332	Tropical Forest Soil	VPPFSSVDYHRYAAECVRLAQRVSDPMDKARLLDMAETFRELAEKTQEKETGD*
Ga0066388_1027101521	3300005332	Tropical Forest Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNGIRHSRRPED*
Ga0066388_1040810051	3300005332	Tropical Forest Soil	LPFFSAVDYRRYAAECVRLAQQVADPGDKTRLLDMAETFRELADKNGIRHSPPPED*
Ga0066388_1059065352	3300005332	Tropical Forest Soil	DYRRYAAECVRPAQSTSNPVDKARLLDMAETFSELAVKGETEDHGNRGS*
Ga0066388_1073117762	3300005332	Tropical Forest Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNGVRQSYPSEE*
Ga0068869_1000312563	3300005334	Miscanthus Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDVRHSGTPDD*
Ga0070666_101120123	3300005335	Switchgrass Rhizosphere	LPFFSAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD*
Ga0070680_1000300455	3300005336	Corn Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGSPDD*
Ga0070682_1013184682	3300005337	Corn Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDGRYSGLP
Ga0070660_1000140386	3300005339	Corn Rhizosphere	LPFFSDVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0070689_1004400713	3300005340	Switchgrass Rhizosphere	WLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDVRHSGQPEN*
Ga0070675_1000602104	3300005354	Miscanthus Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD*
Ga0070671_1012335321	3300005355	Switchgrass Rhizosphere	IDYRRYAAECVRLAQSTSDPVDKARLLDMAETFSELADKSETRSRGNPGG*
Ga0070674_1000505841	3300005356	Miscanthus Rhizosphere	VSPFSAIDYRRYAAECVRLAQSTSDPVDKARLLDMAETFSELTDKSETRS
Ga0070659_1001874353	3300005366	Corn Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDLRHPAPPEG*
Ga0070667_1009794002	3300005367	Switchgrass Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0070703_100685813	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	AVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD*
Ga0070711_1000388288	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LPPFSVIDYRRYAAECVRLAQRVDDPDDKARMLDMAETFRELADKYEARDTGGKNTVIDED*
Ga0070694_1005986293	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDLRHPAPPEG*
Ga0070662_1019564222	3300005457	Corn Rhizosphere	LLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDLRHPAPPEG*
Ga0070662_1019641892	3300005457	Corn Rhizosphere	LLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0068867_1007341283	3300005459	Miscanthus Rhizosphere	EGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDLRHPAPPEG*
Ga0070698_1006282321	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD*
Ga0066905_1004756763	3300005713	Tropical Forest Soil	LPFFSAVDYRRYAAECVRLAQQVADPGDKTRLLDMAETFRELADKNGIRHSRPPED*
Ga0066905_1008394512	3300005713	Tropical Forest Soil	VPPFSSVDYHRYAAECVRLAQRVSDPTDKARLLDMAETFRELAEKTEEKESED*
Ga0066903_1000716486	3300005764	Tropical Forest Soil	VPPFSAIDYRRYAAECVRLAQSTPDPTDKARLLDMAETFVELADRSETKDRGNPGS*
Ga0066903_1033285732	3300005764	Tropical Forest Soil	LPPFSVVDYRRYAAECVRLAQRVSAPDDKARLLDMAETFRELAEKSEAKETGGPNG*
Ga0066903_1089150951	3300005764	Tropical Forest Soil	HLPPFSAVDYHRYAAECVRLARQVSDPNDKDMAETFRELAERHEARNTRDPND*
Ga0068870_100372834	3300005840	Miscanthus Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFRELADKNDTRHSAPPDD*
Ga0081455_100014148	3300005937	Tabebuia Heterophylla Rhizosphere	VPPFSIVDYRRYAAECVRLAQRVEDPLDKARLLDMAETFRELADRNEEKDRRDAED*
Ga0081455_110561262	3300005937	Tabebuia Heterophylla Rhizosphere	VPPFSVVDYRRYAAECVRLAQRVEDPMDKARLLDMAETFRELADRSEEKDLRDAKG*
Ga0075024_1002409293	3300006047	Watersheds	LSPFAAVDYRRYAAECIRLAQRVSDPDDKARLLDMAETFRELADKHDEKVSTRADH*
Ga0075026_1000795544	3300006057	Watersheds	LSPFAAVDYRRYAAECIRLAQRVSDPDDKARLLDMAETFRELADKHDDEKVSTRATTEQQS*
Ga0075366_105295032	3300006195	Populus Endosphere	MDPVSTLPLRVGEHWVPLFSAVDYRRYAAECVRLAQQVADPDDKARLIDMAETFRELAEKNDDRQHGRFDG*
Ga0074051_116015991	3300006572	Soil	RTRLLPLRVGEGWLPFFSVVDYRRYAAECLRLAQQVAAPGDKARLLDMAETFRELADKNDVRHSAPPDD*
Ga0074055_117809913	3300006573	Soil	VDYRRYAAECLRLAQQVAAPGDKARLLDMAETFRELADKNDVRHSAPPDD*
Ga0074056_113577131	3300006574	Soil	VGEGLLPFFSAVDYRRYAAECLRLAQQVAAPGDKARLLDMAETFRELADKNDVRHSAPPDD*
Ga0074053_119858843	3300006575	Soil	DYRRYAAECVRLAQQVAAPGDKARLLDMAETFRELADKNDVRHSAPPDD*
Ga0074049_129552981	3300006580	Soil	EIAGNHWTRTRLLPLFVGEGLLPFFSAVDYRRYAAECVRLAQQVAAPGDKARLLDMAETFRELADKNDVRHSAPPDD*
Ga0074048_132020761	3300006581	Soil	EIAGNHWTRTRLLPLFVGEGLLPFFSAVDYRRYAAECLRLAQQVAAPGDKARLLDMAETFRELADKNDVRHSAPPDD*
Ga0079220_117737811	3300006806	Agricultural Soil	CLPPFSVIDYRRYAAECVRLAQRLDDPDDKARMLDMAETFRELADKYESINTGSKNTIRDED*
Ga0075431_1002466682	3300006847	Populus Rhizosphere	VPPFSVVDYRRYAAECVRLAQRVEDPMDKARLLDMAETFRELADRNEEKNPREAED*
Ga0075433_117123782	3300006852	Populus Rhizosphere	PLRIGEGWLPFFSAVDYRRYAGECVRLAQQVADPDDKARLLDMAETFRELADKSNIRQPHPHEE*
Ga0075425_1015759321	3300006854	Populus Rhizosphere	MWNQWTRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDVRHSGQPEN*
Ga0075435_1018595972	3300007076	Populus Rhizosphere	VSPFSAIDYRRYAAECVRLAQSTSDPVDKARLLDMAETFSELADKSETRSHGSPGG*
Ga0111539_105257393	3300009094	Populus Rhizosphere	MDPVSTLPLRVGEHWVPLFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELAEKNDDRQHGRFDG*
Ga0105242_114556603	3300009176	Miscanthus Rhizosphere	PFSAIDYRRYAAECVRLAQSTSDPVDKARLLDMAETFSELADKSETRSRGNPGG*
Ga0126384_106119093	3300010046	Tropical Forest Soil	LPFFSAVDYRRYAAECVRLAQQVADSDDKARLLDMAETFRELADKSDIRHARLPED*
Ga0126382_100093194	3300010047	Tropical Forest Soil	VPPFSVVDYRRYAAECVRLAQRVEDPSDKARLLDMAETFRELADRNEKKDLHDAED*
Ga0126372_101986663	3300010360	Tropical Forest Soil	VPPFSAIDYRRYAAECVRLAQSASDPVDKARLLDMAETFSELADKTEAKDRGNRGS*
Ga0126377_100021533	3300010362	Tropical Forest Soil	MDPGRLLPLGAGEVSLAFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNGSRHARLPEG*
Ga0134125_120166442	3300010371	Terrestrial Soil	WLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDGRYSGLPED*
Ga0134126_126168652	3300010396	Terrestrial Soil	LPFFSDVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDVRHSGQPEN*
Ga0134124_105859353	3300010397	Terrestrial Soil	PFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD*
Ga0134127_101072414	3300010399	Terrestrial Soil	LRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD*
Ga0134127_102058891	3300010399	Terrestrial Soil	PLRVGEAWLPFFSAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD*
Ga0157347_10479912	3300012502	Arabidopsis Rhizosphere	LPFFSVVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0157339_10096361	3300012505	Arabidopsis Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDARHSGTPDD*
Ga0157285_100021466	3300012897	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARPLDMAETFRELADKNDVRHSGQPEN*
Ga0157296_100025074	3300012905	Soil	MRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0157297_100489392	3300012914	Soil	VPLFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFRELAEKTDDKQSSSSGN*
Ga0126375_101941254	3300012948	Tropical Forest Soil	VSGVFVPPFSVVDYRRYAAECVRLAQRVEDPVDKARLLDMAETFRELADRNEKKDLHDAED*
Ga0164300_102775641	3300012951	Soil	VDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0164298_103830592	3300012955	Soil	LPFFSDVDYRRYAAECVRLAQQVADPDDKVRLLDMAEPFRELADKNDARHSGTPDD*
Ga0164303_100411122	3300012957	Soil	MWNQWTRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0164303_100756895	3300012957	Soil	AIDYRRYAAECVRLAQSTSDPVDKARLLDMAETFSELADKSETRSRGNPGG*
Ga0164305_115601063	3300012989	Soil	VPPFSAIDYRRYAAECVRLAQSTSDPVDKARLLDMAETFSELADKSETWDRGN
Ga0163163_110681173	3300014325	Switchgrass Rhizosphere	VDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD*
Ga0157380_103430493	3300014326	Switchgrass Rhizosphere	SAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD*
Ga0132258_100982338	3300015371	Arabidopsis Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKTDGRLTGRAED*
Ga0132258_129951462	3300015371	Arabidopsis Rhizosphere	LPPFSVVDYRRYAAECVRLAQQVSARDDKARLLDMAETFRELAEKSEAKESGGPNG*
Ga0132258_132580102	3300015371	Arabidopsis Rhizosphere	VPLFSAVDYRRYAAECVRLAQQVADPEDKTRLLDMAETFRELADKPDISQSGRPEN*
Ga0132258_133087631	3300015371	Arabidopsis Rhizosphere	DYPRYAAECVRLAQSTSDPVDKARLLDMAETFSELADKSETRSRGSPGG*
Ga0132256_1009615182	3300015372	Arabidopsis Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDYKARLLDMAETFRELADKTDGRLTGRAED*
Ga0132256_1015196541	3300015372	Arabidopsis Rhizosphere	VGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDLRHPSPPED*
Ga0132255_1018245614	3300015374	Arabidopsis Rhizosphere	SAIDYRRYAAECVRLAQSTSDPADKARLLDMAETFSELADKSETRSRGNPGG*
Ga0187786_100045366	3300017944	Tropical Peatland	LPPLSAVDYRRYAAECIGLAQSIANPDDKARLLDMAETFRELADKNDAKNFDRTGN
Ga0187776_105788722	3300017966	Tropical Peatland	LPPFSAVDYRRYAAECIRLAQSIANPDDKARLLDMAETFRELADKNDAKNFDRTGN
Ga0187777_112989562	3300017974	Tropical Peatland	LPPFSVVDYRRYAAECVRLAQQVSAPDDKARLLDMAETFRELAEKSEAKETGGPNG
Ga0184634_104904092	3300018031	Groundwater Sediment	VPPFSAIDYRRYAAECVRLAQSTSNPLDKARLLDKTFSEADKHEATDSGHTHG
Ga0187788_100003101	3300018032	Tropical Peatland	LPPFSAVDYRRYAAECIRLAQSIANLDDKARLLDMAETFRELADKNDAKNFDRTGN
Ga0187788_101093125	3300018032	Tropical Peatland	RGTNTAVRGRREGFLPPFSSIDYHRYSAERVRLAQRTSDPNDKARLLDMAETFRELAERNGVKHSDRMED
Ga0173479_100074352	3300019362	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD
Ga0222623_101373893	3300022694	Groundwater Sediment	VPPFSAIDYRRYAAECVRLAQSTSNPLDKARLLDKTFSELADKHEATDSGHTHG
Ga0247792_10020071	3300022880	Soil	LPFFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD
Ga0247786_10012822	3300022883	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0247785_10091971	3300022889	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDGRYSGLPED
Ga0247753_10187421	3300022892	Soil	LPFFSAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRH
Ga0247795_10019336	3300022899	Soil	LPFFSAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD
Ga0207653_102043853	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPD
Ga0207710_101916331	3300025900	Switchgrass Rhizosphere	TRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDVRHSGQPEN
Ga0207710_102784673	3300025900	Switchgrass Rhizosphere	VSPFSAIDYRRYAAECVRLAQSTSDPADKARLLDMAETFSELADKSETRSPGNP
Ga0207680_103190471	3300025903	Switchgrass Rhizosphere	SAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD
Ga0207707_101304694	3300025912	Corn Rhizosphere	GEGWLPFFSDVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0207671_103601592	3300025914	Corn Rhizosphere	LPFFSDVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD
Ga0207657_100133647	3300025919	Corn Rhizosphere	LPFFSDVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0207649_100862234	3300025920	Corn Rhizosphere	NQWTRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD
Ga0207652_103233813	3300025921	Corn Rhizosphere	RYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0207690_105376351	3300025932	Corn Rhizosphere	RMRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDLRHPAPPEG
Ga0207670_101408201	3300025936	Switchgrass Rhizosphere	TRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDVRHSGQPEN
Ga0207640_100146531	3300025981	Corn Rhizosphere	GEAWLPFFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD
Ga0207658_118710201	3300025986	Switchgrass Rhizosphere	QWTRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0207639_100763151	3300026041	Corn Rhizosphere	SDVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0207641_105013533	3300026088	Switchgrass Rhizosphere	LRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD
Ga0207526_1013702	3300026717	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSG
Ga0207502_1040481	3300026828	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDA
Ga0207443_10035183	3300026853	Soil	RRYAAVCVRFAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPDD
Ga0207562_10032642	3300027446	Soil	MWNQWTRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0207637_10015393	3300027483	Soil	GWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGPPDD
Ga0207981_10109423	3300027560	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNNDAKRPGSSEA
Ga0210002_10031251	3300027617	Arabidopsis Thaliana Rhizosphere	WLPFFSAIDYRRYAAECVRLAQQVVDPDDKARLLDMAETFRELADKTDLRHPAPPEE
Ga0209983_10223982	3300027665	Arabidopsis Thaliana Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDIRHSAPPDH
Ga0209998_100268802	3300027717	Arabidopsis Thaliana Rhizosphere	LPFFSAIDYRRYAAECVRLAQQVVDPDDKARLLDMAETFRELADKTDLRHPAPPEE
Ga0209974_102893312	3300027876	Arabidopsis Thaliana Rhizosphere	LPFFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFRELADKTESRPSAPPVA
Ga0207428_101673871	3300027907	Populus Rhizosphere	MDPVSTLPLRVGEHWVPLFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELAEKNDDRQHGRFDG
Ga0247749_10050903	3300027993	Soil	LPFFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFRELADKNDIRHS
(restricted) Ga0255310_100147473	3300031197	Sandy Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNNARHSGPPDD
Ga0170820_100058262	3300031446	Forest Soil	VPPFSAIDYRRYAAECVRLAQSTSNPLDKACLLDMAETFSELAEKHEATDSGHTHG
Ga0310887_100167881	3300031547	Soil	LPFFSAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDIRHSAPPD
Ga0310886_100793601	3300031562	Soil	ARNQWTRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0307468_1001754723	3300031740	Hardwood Forest Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNEIRHARLPED
Ga0310907_100061791	3300031847	Soil	TRTRLLPLRVGEGWLPFFSAVDYRRYAAECVRLAQQVADPDDKVRLLDMAETFRELADKNDARHSGTPDD
Ga0310892_106341292	3300031858	Soil	LLPFFSAVDYRRYAAECVRLAQQVAAPGDKARLLDMAETFRELADKNDVRHSAPPDD
Ga0307470_101638891	3300032174	Hardwood Forest Soil	MMGNQWTQTRLLPLRVGEAWLPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNEIRHARLPED
Ga0307470_118606661	3300032174	Hardwood Forest Soil	LPFFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFREIADKNDIRHSAPPDD
Ga0307471_1009363972	3300032180	Hardwood Forest Soil	LPFFSAVDYRRYAAECVRLAQQVADPGDKARLLDMAETFRELVDKNDIRHAAPPDD
Ga0335080_114361862	3300032828	Soil	LPPFSAVDYRRYAAECVRLAQSIANPDDKARLLDMAETFRELADKNDAKNFDRTGN
Ga0310811_106192752	3300033475	Soil	LPFFSAVDYRRYAAECVRLAQQVADPDDKARLLDMAETFRELADKNDVRHSGQPEN
Ga0326723_0551372_290_460	3300034090	Peat Soil	LSPFAAVDYRRYAAECIRLAQRVSDSDDKARLLDMAETFRELADKHDEKVLTRADD
Ga0326723_0603441_3_167	3300034090	Peat Soil	PFAAVDYRRYAAECIRLAQRVSDSDDKARLLDMAETFRELADKHDGKVLTRADD
Ga0373959_0001889_2741_2911	3300034820	Rhizosphere Soil	MPFFSAVDYRRYAAVCVRLAQQVADPGDKARLLDMAETFRELADKNDTRHSAPPDD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters