Metagenome / Metatranscriptome Family F040565

Basic Information
Family ID	F040565
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	46 residues
Representative Sequence	LMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI
Number of Associated Samples	127
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	5.59 %
% of genes from short scaffolds (< 2000 bps)	4.35 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Unclassified (94.410 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.634 % of family members)
Environment Ontology (ENVO)	Unclassified (34.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.311 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF14534	DUF4440	4.97
PF11158	DUF2938	4.35
PF04461	DUF520	4.35
PF13673	Acetyltransf_10	3.11
PF13662	Toprim_4	2.48
PF00903	Glyoxalase	2.48
PF00805	Pentapeptide	1.86
PF03544	TonB_C	1.86
PF02518	HATPase_c	1.24
PF12681	Glyoxalase_2	1.24
PF00313	CSD	1.24
PF05685	Uma2	0.62
PF00494	SQS_PSY	0.62
PF01370	Epimerase	0.62
PF00448	SRP54	0.62
PF13544	Obsolete Pfam Family	0.62
PF03400	DDE_Tnp_IS1	0.62
PF08241	Methyltransf_11	0.62
PF00512	HisKA	0.62
PF01872	RibD_C	0.62
PF13649	Methyltransf_25	0.62
PF13520	AA_permease_2	0.62
PF09350	DJC28_CD	0.62
PF13884	Peptidase_S74	0.62
PF04072	LCM	0.62
PF10102	DUF2341	0.62
PF14559	TPR_19	0.62
PF02371	Transposase_20	0.62
PF14066	DUF4256	0.62
PF00583	Acetyltransf_1	0.62
PF00106	adh_short	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	4.35
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.86
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.86
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.62
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.62
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.62
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.62
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.62
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.62

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.41 %
All Organisms	root	All Organisms	5.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.41 %
cellular organisms	root	All Organisms → cellular organisms	5.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.41 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.41 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.41 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.48 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005561\|Ga0066699_10017517	All Organisms → cellular organisms → Bacteria	3831	Open in IMG/M
3300012938\|Ga0162651_100052427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300012988\|Ga0164306_10351879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1092	Open in IMG/M
3300019879\|Ga0193723_1085975	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300020012\|Ga0193732_1029726	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300022694\|Ga0222623_10228767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300026306\|Ga0209468_1011850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3232	Open in IMG/M
3300027457\|Ga0207625_104019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	671	Open in IMG/M
3300030848\|Ga0075388_10013182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.41%
Host-Associated	Host-Associated	5.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.06%
Plants	Host-Associated → Plants	5.59%
Aquatic	Environmental → Aquatic	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.44%
Sediment	Environmental → Aquatic → Sediment	3.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.86%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.62%
Roots	Host-Associated → Plants → Roots	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.61%
Loam	Environmental → Terrestrial → Soil → Loam	6.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.62%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.24%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.62%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.24%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.24%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027457	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-D (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03085950	2088090014	Soil	WFLMFPSQGMGWLGLDAPSDAHLVRASLFNHIIFGLGIALWMAVMRPI
KansclcFeb2_04636980	2124908045	Soil	GRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI
JGI10215J12807_10961223	3300000881	Soil	FPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIMFGLGIALWMAVIRPI*
JGI10214J12806_118169894	3300000891	Soil	MGWLGRDAPGDAHLARISLFNHIMFGLGIALWMAVIRPI*
JGI10214J12806_129928642	3300000891	Soil	WFLMFPSQGMGWLGRDAPGDAHLARISLFNHIMFGLGIALWMAVLRPI*
JGI10216J12902_1016833381	3300000956	Soil	GMGWLGRDAPADAHLAPISLFNHVVFGLGIALWMAVIRPI*
JGI24808J26613_10382561	3300002099	Soil	TVLPWFLMFPSQGMGWLGRDAPGDAHLARASLFNHIIFGLGIALWMTVMRSV*
Ga0062589_1000250345	3300004156	Soil	PSQGMGWLGRDAPGDAHLARISLFNHIMFGLGIALWMAVIRPI*
Ga0062591_1015605001	3300004643	Soil	FGWLGQDASADAHLARVSLFNHIIFGLAIALWMAVLRPI*
Ga0062594_1007560071	3300005093	Soil	VFPWFVMFPSQGMGWVGWDAPANAHLVRASLFNHIIFGLCIVLWIAVIRTI*
Ga0066677_106861012	3300005171	Soil	MGWLGRDAPGDAHLVRVSLFNHVIFGLGIALWMAVMWPI*
Ga0066673_108091722	3300005175	Soil	PWFLMFPSQGMGWLGRDAPGDAHLAGISLFNHIMFGLGIALWMAVIKPI*
Ga0066679_105333881	3300005176	Soil	PWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0066676_100939273	3300005186	Soil	SQGMGWLGRDAPGDAHLARVSLFNHIIFGLGMALWMAVMRPI*
Ga0065715_109281691	3300005293	Miscanthus Rhizosphere	SQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0065705_105769982	3300005294	Switchgrass Rhizosphere	LMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI*
Ga0066388_1079696431	3300005332	Tropical Forest Soil	VFPWFVMFPSQGMGWLGRNAPGEAHLTRMSFYNHVIFGLGLALWAAVLRPL*
Ga0070689_1001201064	3300005340	Switchgrass Rhizosphere	MGWLGRDAPGDAHLARISLFNHMIFGLGIALWMAVMRPI*
Ga0070714_1021284641	3300005435	Agricultural Soil	GTATTVFPWFLMFPSQGMGWLGRDAGDAHLARISLFNHIMFGLGIALWMAVIRPI*
Ga0070710_111591962	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TTVFPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0070707_1017624051	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GMGWLGRDAPGDAHLARVSLFNHFIFGLGIALWVAVMRPI*
Ga0070699_1018740612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	WFLMFPSQGMGWLGRDAPGDAHLSRVSLFNHIIFGLGIALWVAVMRPI*
Ga0070697_1017047601	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFSLGIALWMAVIRPI*
Ga0066697_108293272	3300005540	Soil	GRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI*
Ga0066661_101234112	3300005554	Soil	ATTVFPWFLMFPSQGMGWLGLDAPGDAHLARVSLFNHIIFGLGIALWMAVLRL*
Ga0066699_100175171	3300005561	Soil	WLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVIRPI*
Ga0066903_1006987051	3300005764	Tropical Forest Soil	ATTVFPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVIRPI*
Ga0066903_1041200082	3300005764	Tropical Forest Soil	ATTVFPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0068862_1004447942	3300005844	Switchgrass Rhizosphere	WFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGLALWMAVMRPI*
Ga0066651_106469762	3300006031	Soil	TTVFPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHMIFGLGIALWVAVMRPI*
Ga0066656_105986641	3300006034	Soil	MGWLGRDAPGDAHLARVSLFNHIIFGLGMALWMAVMRPI*
Ga0066653_100443262	3300006791	Soil	WFLMFPSQGMGWLGRDAPGDAHLGRISLFNHIMFGLGIALWMAVIRPI*
Ga0066665_100022859	3300006796	Soil	YGTATTVFPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHITFGLGIALWMAVIRPI*
Ga0075433_116496732	3300006852	Populus Rhizosphere	GMGWLGRNAPGDAHLARVSLFNHIIFGLGIALWMAVLRPI*
Ga0075434_1018283801	3300006871	Populus Rhizosphere	PWFLMFPSQGMGCLGLDAPGDAHLVRVSLFNHIIFGLGIALWVAVMRPI*
Ga0079219_115560571	3300006954	Agricultural Soil	TTVLPWFIMFPSQGMGWLGLDAPGDAHLARSSLFNHIVFGLGIALWMAVLRPI*
Ga0066710_1001187531	3300009012	Grasslands Soil	FLMFPSQGMGWLGRDAPADAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0066710_1006914173	3300009012	Grasslands Soil	FLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0105245_111399571	3300009098	Miscanthus Rhizosphere	TATTVLPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHMIFGVGIALWMAVMRPI*
Ga0075418_115259862	3300009100	Populus Rhizosphere	FPWFLMFPSQGMGWLGRDAPGDAHLVRASLFNHIIFGLGIALWVAVMRPI*
Ga0066709_1033442551	3300009137	Grasslands Soil	GRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0126380_102058421	3300010043	Tropical Forest Soil	GTATTVFPWFLMFSSQGMGWLGRDAPGDAHLVRASLFNHIIFGLGIALWVAVMRPI*
Ga0126384_106254452	3300010046	Tropical Forest Soil	QGMGWLGWDTPGDVHLVRASLFNHIMFGLGIALWMAVLRPI*
Ga0126384_110520513	3300010046	Tropical Forest Soil	MFPSQGMGWLGRDAPGDGHLARVSLFNHMIFGLGIALWMAVMRPI*
Ga0126384_117837462	3300010046	Tropical Forest Soil	LGRNAPGDAHLARVSLFNHIIFGPGIALWVAVMRSI*
Ga0126382_106275131	3300010047	Tropical Forest Soil	SQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVVRPI*
Ga0134070_100985551	3300010301	Grasslands Soil	TGFPWFLMFPSQGMGWLGRDAPGNAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0134070_102307051	3300010301	Grasslands Soil	ATTVFPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0134086_101788531	3300010323	Grasslands Soil	SQGMGWLGRDAPGDAHLGRISLFNHIMFGLGIALWMAVIRPI*
Ga0134086_102416331	3300010323	Grasslands Soil	GWLGRDAPGDAHLARVSLFNHIIFGLGMALWMAVMRPI*
Ga0134065_102694111	3300010326	Grasslands Soil	MGWLGRDAPGDAHLAGISLFNHIMFGLGIALWMEVIRPI*
Ga0126370_107440023	3300010358	Tropical Forest Soil	ATTALPWFLMFPSQGMGWLGLDAPGDAHLARASLFNHIIFGVGIALWIAVIRPI*
Ga0126376_106004631	3300010359	Tropical Forest Soil	TATTVFPWFVMFPSQGMGWLGRDAPGNAHLARISLFNHIMFGLGIALWMKVISPI*
Ga0126378_112718971	3300010361	Tropical Forest Soil	LGWDAPGDAHLARVSLFNHIIFGLGIALWMAVIRPI*
Ga0126378_127874141	3300010361	Tropical Forest Soil	WFLMFPSQGMGWLGRDAPGDAHLARISLFNHIMFGLGIALWMAVIRPI*
Ga0126378_129049702	3300010361	Tropical Forest Soil	LDAPGDAHLARASLFNHIIFGVGIALWIAVIRPT*
Ga0126377_119938951	3300010362	Tropical Forest Soil	PWFLMFPSQGMGWLGRDAPGDGHLARVSLFNHIIFGLGIALWMAVMRPI*
Ga0126379_137041552	3300010366	Tropical Forest Soil	PWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMSVMPSIAAAHMMP*
Ga0126381_1003969671	3300010376	Tropical Forest Soil	MFPSQWMGWLGGDAPGDADLARISRFNHIMFGLGIAAWMKVISPI*
Ga0126381_1011085171	3300010376	Tropical Forest Soil	QGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVIRPI*
Ga0126381_1021869992	3300010376	Tropical Forest Soil	PWFLMFPSQGMGWLGRDAPGDAHLARASLFNHIIFGLAIALWMAMMRPI*
Ga0126381_1032076682	3300010376	Tropical Forest Soil	LGLDAPGDAHLARASLFNHIIFGVGIALWIAVIRPI*
Ga0126381_1036723353	3300010376	Tropical Forest Soil	AVLYGTATTVLPWFVMFPSQGMGCLGRNAPGNAHLARMSLFNHIMFGMGIALWTAVITPI
Ga0126381_1044149881	3300010376	Tropical Forest Soil	ATTVFPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIMFGLGIALWMAVIRPI*
Ga0126383_129577221	3300010398	Tropical Forest Soil	PWFVMFPSQGLGWLGWNAPGEAHLARMSLYNHVIFGLGLALWTAVLRQLR*
Ga0134121_101163651	3300010401	Terrestrial Soil	PWFLMFPSQGMGWLGRDAPGGAHLARVSLFNHIIFGLSIALWIAVMRPIASSIG*
Ga0137364_100118349	3300012198	Vadose Zone Soil	WLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0137364_102650292	3300012198	Vadose Zone Soil	RDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0137364_103535993	3300012198	Vadose Zone Soil	GMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0137365_105283601	3300012201	Vadose Zone Soil	MGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0137365_113602571	3300012201	Vadose Zone Soil	WFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGMALWMAVMRPI*
Ga0137363_116871862	3300012202	Vadose Zone Soil	WFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIGLWMAVIRPF*
Ga0137362_102969814	3300012205	Vadose Zone Soil	GMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVMRPI*
Ga0137376_107048462	3300012208	Vadose Zone Soil	FPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIAL*
Ga0137376_107445383	3300012208	Vadose Zone Soil	FPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0137376_110438722	3300012208	Vadose Zone Soil	FPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIAMWVAVMRPI*
Ga0137379_109186072	3300012209	Vadose Zone Soil	GMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI*
Ga0137378_100037181	3300012210	Vadose Zone Soil	WFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0137378_101309615	3300012210	Vadose Zone Soil	FLMFPSQGMGWLGRVAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI*
Ga0137378_102967852	3300012210	Vadose Zone Soil	FPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWITVIRPI*
Ga0137377_107325522	3300012211	Vadose Zone Soil	GRDAPGDAHLARISLFNHIIFGLGIALSVAVMRPI*
Ga0137370_101838892	3300012285	Vadose Zone Soil	GMGWLGADAPGYAYLARGSLFNPSILGLGIALWVAVMRPI*
Ga0137370_106098381	3300012285	Vadose Zone Soil	PWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLDIALWVAVMKPI*
Ga0137387_104747982	3300012349	Vadose Zone Soil	SQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMALIRPI*
Ga0137372_103000851	3300012350	Vadose Zone Soil	GWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI*
Ga0137371_102796692	3300012356	Vadose Zone Soil	LGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0137385_107628601	3300012359	Vadose Zone Soil	TTVFPWFLMFPSQGMGWLGRDAPGDAHLPRVSLFNHIIFGLGIALWMAVMRPI*
Ga0137360_116179731	3300012361	Vadose Zone Soil	SQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI*
Ga0137360_117095811	3300012361	Vadose Zone Soil	VFPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGMALWVAVMRPI*
Ga0137358_103579201	3300012582	Vadose Zone Soil	IVLTLVYLLVVAHATPTALNAILYGTATTAFPWFLMFPSQGMGWLGRDAPGDAHLARVDLWMAVMRPI*
Ga0137358_107327802	3300012582	Vadose Zone Soil	WLGRDAPGDAHLARVSLFNHIIFGLGMALWVAVMRPI*
Ga0137359_103526463	3300012923	Vadose Zone Soil	QGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0137404_111689432	3300012929	Vadose Zone Soil	GRDAPGDAHLARVSLFNHIIFGLGMALWVAVMRPI*
Ga0137407_116595282	3300012930	Vadose Zone Soil	WLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVIRPI*
Ga0162651_1000524272	3300012938	Soil	WFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI*
Ga0164302_104031501	3300012961	Soil	TVFPWFLMFPSQGMGWLGRDAPGDAHLVRASLFNHIIFGLGIALWVAVMKPI*
Ga0126369_127445301	3300012971	Tropical Forest Soil	SQGMGWLGLDAPGDAHLARASLFNHIIFGVGIALWIAVIRPI*
Ga0134110_100127471	3300012975	Grasslands Soil	AILYGTATTVFPWFLMFPSQGMGWLGLDAPGDAHLARVSLFNHIIFGLAIALWMAVLRL*
Ga0134110_101196103	3300012975	Grasslands Soil	WLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0164304_117237291	3300012986	Soil	SQGMGWLGLDAPGDAHLARASLFNHIIFGVAIALWIAVTRPI*
Ga0164306_103518793	3300012988	Soil	LMFPSQGMGWLGRNAPGNAHLARVSLFNHIIFGLGIALWVAVMKPI*
Ga0134081_101405013	3300014150	Grasslands Soil	LMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI*
Ga0163163_112522721	3300014325	Switchgrass Rhizosphere	RDAPGDAHLARISLFNHMIFGLGIALWMAVMRPI*
Ga0137405_13989902	3300015053	Vadose Zone Soil	MFPSQGMGWLDGMRRVMLIWLALSLFNHIIFGLGLALWMAVMRPI*
Ga0132258_119442604	3300015371	Arabidopsis Rhizosphere	GWLGWDAPDDAHLARASLFNHIIFGLGIALWVAVMKPI*
Ga0182032_106075793	3300016357	Soil	PNRNDIPHWLGRDTPGDAHLARISLFNHIIFGLSIALWLAVIRPI
Ga0182032_118996401	3300016357	Soil	TALPWFLMFPSQGMGWLGLDAPGDAHLARASLFNHIIFGVGIALWIAVIRPI
Ga0182040_111633761	3300016387	Soil	QGMGWMGRDAPGDAHLARASLFNHVVFGLGIALWTAVIGLI
Ga0134083_102582181	3300017659	Grasslands Soil	WFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI
Ga0134083_105613712	3300017659	Grasslands Soil	FPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI
Ga0184620_101116161	3300018051	Groundwater Sediment	GTATTVFPWFLMFPSQGMGWLGRDATGDAHLARMSLFNHFIFGLGIALWMAVMRPI
Ga0184618_102707021	3300018071	Groundwater Sediment	TVLPWFFMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0184612_103862591	3300018078	Groundwater Sediment	VFPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0184625_101677562	3300018081	Groundwater Sediment	ATTVFPCFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0066669_106760622	3300018482	Grasslands Soil	GMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI
Ga0066669_110399341	3300018482	Grasslands Soil	TVFPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHMIFGLGIALWVAVMRPI
Ga0173482_104824582	3300019361	Soil	LMFPSQGMGWLGRDAPGDAHLARISLFNHIMFGLGIALWMAVLRPI
Ga0193715_10282291	3300019878	Soil	EAATTVLPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0193723_10859751	3300019879	Soil	SQGIGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI
Ga0193723_11494411	3300019879	Soil	ATTVFPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGFGIGLWMAVIRQF
Ga0193713_10745841	3300019882	Soil	GWLGRDAPGDAHLARISLFNHIVFGLGIALWMAVIRPI
Ga0193727_10252053	3300019886	Soil	QGMGWLGRDAPGDAHLARISLFNHIIFGLGLALWMAVIRPI
Ga0193727_11475971	3300019886	Soil	ATTVFPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRPI
Ga0193730_10465131	3300020002	Soil	GRDAPGEAHLARISLFNHIMFGLGIALWMAVMRPI
Ga0193755_12098511	3300020004	Soil	TATTVFPWFLMFPSQGMGWLGRDATGDAHLARMSLFNHFIFGLGIALWMAVMRPI
Ga0193732_10297261	3300020012	Soil	QGMVWLGRDATGDAHLARMSLFNHFIFGLGIALWMAVMRPI
Ga0179594_100287431	3300020170	Vadose Zone Soil	VFPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGVGIALWMAVIRSI
Ga0210382_102020552	3300021080	Groundwater Sediment	TATTVLPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0193719_103863912	3300021344	Soil	QGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI
Ga0193695_11181112	3300021418	Soil	GRNAPGDAHLVRVSLFNHIIFGLGIALWVAVMRPI
Ga0222623_102287671	3300022694	Groundwater Sediment	GMGWLGRDAPGDAHLARVSLFNHITFGLGIALWVAVMRPI
Ga0222622_105029002	3300022756	Groundwater Sediment	WFLMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIGLWMAVIRPF
Ga0193714_10289982	3300023058	Soil	QGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMKPI
Ga0193714_10493212	3300023058	Soil	GMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0207659_103162263	3300025926	Miscanthus Rhizosphere	LGRDAPGDAHLARISLFNHIMFGLGIALWMAVIRPI
Ga0207701_101769031	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	QGMGWLGRDAPGDAHLARISLFNHIIFGLGLALWMAVMRPI
Ga0209350_11230792	3300026277	Grasslands Soil	MGWLGLDAPGDAHLARVSLFNHIIFGLGIALWMAVLRL
Ga0209468_10118501	3300026306	Soil	FPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVIRPI
Ga0209469_11239242	3300026307	Soil	TATTVFPWFLMFPSQGMGWLGRDAPGDAHLARISLFNHITFGLGIALWMAVIRPI
Ga0209153_10787543	3300026312	Soil	PWFLMFPSQGMGWLGLDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0209470_11086423	3300026324	Soil	ATTVFPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI
Ga0209057_10482063	3300026342	Soil	LMFPSQGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVLRL
Ga0209159_11259871	3300026343	Soil	SCSPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGMALWMAVMRPI
Ga0209690_12684742	3300026524	Soil	GWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0209156_104760641	3300026547	Soil	PWFLMFPSQGMGWLGRDAPGDAHLARISLFNHTIFGLGIALWMAVTRPI
Ga0207625_1040191	3300027457	Soil	TVLPWFIMFPSQGFGWLGRDASGDAHLARVSLFNHIIFGLGIALWMAVIRPI
Ga0209689_10115221	3300027748	Soil	FPSQGMGWLGRDAPDDAHLARVSLFNHIIFGLGIALWVAVMRPI
Ga0307281_101656452	3300028803	Soil	FLMFPSQGMGWLGRDAPGDAHLARISVFNHIIFGLGIALWMAVMRPI
Ga0075388_100131825	3300030848	Soil	SQGMGWLGRDAPGDAHLARISLFNHIVFGLGIALWMAVITPI
Ga0170823_107340541	3300031128	Forest Soil	LMFPSQGMGWLGRDAPGDAHLARASLFNHIIFGLGIALWMPVIRPI
Ga0170823_144788682	3300031128	Forest Soil	TVFPWFLMFPSQGMGWLGRDAPGDAHLARVSLFNHIIFGLGIALWVAVMKPI
Ga0170824_1099651711	3300031231	Forest Soil	LMFPSQGMGWLGRDAPGDAHLARASLFNHIIFGLGIALWMPVLKPV
Ga0170824_1144351172	3300031231	Forest Soil	WLGRDAPGDAHLARISLFNHIVFGLGIALWMAVITPI
Ga0170824_1278465481	3300031231	Forest Soil	WLGRDAPGDAHLARISLFNHIVFGLGIALWMAVMRSI
Ga0170820_143282862	3300031446	Forest Soil	PWFLMFASQGMGWLGRHAPGDAHLARASLFNHIIFGLGIALWVAVMRPI
Ga0307475_103079501	3300031754	Hardwood Forest Soil	SRHKGMGWLGRDAPGDAHLARISLFNHIIFGLGIALWMAVIRSI
Ga0306919_109968151	3300031879	Soil	WFLMFPSQGMGWLGLDAPGDAHLARASLFNHIIFGVGIALWIAVIRPI
Ga0307472_1004829152	3300032205	Hardwood Forest Soil	GRDAPGDAHLARVSLFNHIIFGLGIALWMALLRPI
Ga0310812_103770841	3300032421	Soil	MGWLGRDAPGDAHLARVSLFNHIIFGLGIALWMAVMRPI
Ga0310914_111831741	3300033289	Soil	MFPSQGMGWMGRDAPGDAHLARASLFNHVVFGLGIALWTAVIGLI
Ga0310810_112083711	3300033412	Soil	ILPWFVMFPSQGMGWLGWEAPGDAHLARASLFNHIVFGLGIALWTVVIRPI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040565

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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