Metagenome / Metatranscriptome Family F040248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040248
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	54 residues
Representative Sequence	MAMNDLSSDNPRTPVAKKPYEKPSFRYEQVFVTTALSCGKIGGTGGGCAGTTKVS
Number of Associated Samples	115
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	13.58 %
% of genes from short scaffolds (< 2000 bps)	44.44 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.802 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (10.494 % of family members)
Environment Ontology (ENVO)	Unclassified (20.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.790 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF00717	Peptidase_S24	48.15
PF13185	GAF_2	5.56
PF14907	NTP_transf_5	4.94
PF05402	PqqD	3.09
PF13186	SPASM	3.09
PF01590	GAF	1.23
PF07690	MFS_1	1.23
PF13503	DUF4123	0.62
PF09339	HTH_IclR	0.62
PF00933	Glyco_hydro_3	0.62
PF01553	Acyltransferase	0.62
PF13450	NAD_binding_8	0.62
PF01695	IstB_IS21	0.62
PF00664	ABC_membrane	0.62
PF13377	Peripla_BP_3	0.62
PF08029	HisG_C	0.62
PF04264	YceI	0.62
PF02410	RsfS	0.62
PF01042	Ribonuc_L-PSP	0.62
PF00293	NUDIX	0.62
PF00756	Esterase	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0040	ATP phosphoribosyltransferase	Amino acid transport and metabolism [E]	0.62
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.62
COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits	Translation, ribosomal structure and biogenesis [J]	0.62
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.62
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.62
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.80 %
Unclassified	root	N/A	14.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.80 %
Unclassified	root	N/A	14.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.80 %
Unclassified	root	N/A	14.20 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.46 %
Unclassified	root	N/A	14.20 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	46.30 %
Unclassified	root	N/A	14.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	46.30 %
Unclassified	root	N/A	14.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	46.30 %
Unclassified	root	N/A	14.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.79 %
Lichenibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae	0.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	20.99 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	14.20 %
Unclassified	root	N/A	14.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.79 %
Lichenibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium	0.62 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.62 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	20.99 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	14.20 %
Unclassified	root	N/A	14.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.79 %
Lichenibacterium minor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium minor	0.62 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.62 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10034019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2940	Open in IMG/M
3300000567\|JGI12270J11330_10035152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2876	Open in IMG/M
3300000567\|JGI12270J11330_10055760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2076	Open in IMG/M
3300003218\|JGI26339J46600_10034628	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300003219\|JGI26341J46601_10003273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	5358	Open in IMG/M
3300003368\|JGI26340J50214_10047440	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300003505\|JGIcombinedJ51221_10128578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1018	Open in IMG/M
3300004100\|Ga0058904_1418897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	517	Open in IMG/M
3300004152\|Ga0062386_100005262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	8970	Open in IMG/M
3300004152\|Ga0062386_100532972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	955	Open in IMG/M
3300004631\|Ga0058899_11463900	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005434\|Ga0070709_10540518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	890	Open in IMG/M
3300005435\|Ga0070714_100000312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	36817	Open in IMG/M
3300005435\|Ga0070714_101531559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300005437\|Ga0070710_11042491	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005533\|Ga0070734_10000152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	190614	Open in IMG/M
3300005533\|Ga0070734_10081587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1912	Open in IMG/M
3300005534\|Ga0070735_10068370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2296	Open in IMG/M
3300005537\|Ga0070730_10077265	All Organisms → cellular organisms → Bacteria → Acidobacteria	2338	Open in IMG/M
3300005541\|Ga0070733_10000157	All Organisms → cellular organisms → Bacteria	62302	Open in IMG/M
3300005542\|Ga0070732_10002924	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	9192	Open in IMG/M
3300005542\|Ga0070732_10358239	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005591\|Ga0070761_10008419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	5878	Open in IMG/M
3300005591\|Ga0070761_11009657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	528	Open in IMG/M
3300005994\|Ga0066789_10006282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5244	Open in IMG/M
3300005994\|Ga0066789_10370345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	599	Open in IMG/M
3300006028\|Ga0070717_10002613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	12702	Open in IMG/M
3300006052\|Ga0075029_100019509	All Organisms → cellular organisms → Bacteria → Acidobacteria	3786	Open in IMG/M
3300006052\|Ga0075029_100066218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2116	Open in IMG/M
3300006059\|Ga0075017_100031496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	3496	Open in IMG/M
3300006059\|Ga0075017_100047647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2870	Open in IMG/M
3300006102\|Ga0075015_100775425	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006162\|Ga0075030_100017691	All Organisms → cellular organisms → Bacteria	6161	Open in IMG/M
3300006162\|Ga0075030_100035664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	4227	Open in IMG/M
3300006162\|Ga0075030_101088982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	628	Open in IMG/M
3300006176\|Ga0070765_100051176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	3371	Open in IMG/M
3300006176\|Ga0070765_100081927	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2740	Open in IMG/M
3300009520\|Ga0116214_1265784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300009520\|Ga0116214_1274986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	643	Open in IMG/M
3300009523\|Ga0116221_1000664	All Organisms → cellular organisms → Bacteria	23430	Open in IMG/M
3300010339\|Ga0074046_10625547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300010341\|Ga0074045_10023965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	4720	Open in IMG/M
3300010341\|Ga0074045_10924406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	550	Open in IMG/M
3300010343\|Ga0074044_10391009	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300010379\|Ga0136449_100715282	All Organisms → cellular organisms → Bacteria → Acidobacteria	1676	Open in IMG/M
3300010379\|Ga0136449_102244553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	794	Open in IMG/M
3300010398\|Ga0126383_11582641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium minor	745	Open in IMG/M
3300011120\|Ga0150983_11974400	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300011120\|Ga0150983_16313502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300012960\|Ga0164301_10603411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	811	Open in IMG/M
3300014158\|Ga0181521_10016502	All Organisms → cellular organisms → Bacteria	6497	Open in IMG/M
3300014164\|Ga0181532_10000134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	72729	Open in IMG/M
3300014164\|Ga0181532_10008978	All Organisms → cellular organisms → Bacteria → Acidobacteria	7946	Open in IMG/M
3300014498\|Ga0182019_10286882	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300015195\|Ga0167658_1030494	All Organisms → cellular organisms → Bacteria → Acidobacteria	1425	Open in IMG/M
3300016750\|Ga0181505_10200338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	655	Open in IMG/M
3300017823\|Ga0187818_10000531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13926	Open in IMG/M
3300017823\|Ga0187818_10023735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2624	Open in IMG/M
3300017823\|Ga0187818_10183758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300017930\|Ga0187825_10242572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	658	Open in IMG/M
3300017933\|Ga0187801_10351022	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300017936\|Ga0187821_10008223	All Organisms → cellular organisms → Bacteria	3535	Open in IMG/M
3300017936\|Ga0187821_10140226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300017972\|Ga0187781_10046707	All Organisms → cellular organisms → Bacteria → Acidobacteria	2980	Open in IMG/M
3300017972\|Ga0187781_10070812	All Organisms → cellular organisms → Bacteria → Acidobacteria	2403	Open in IMG/M
3300017975\|Ga0187782_10017723	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5189	Open in IMG/M
3300017975\|Ga0187782_10676605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	795	Open in IMG/M
3300017995\|Ga0187816_10407638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300018007\|Ga0187805_10017456	All Organisms → cellular organisms → Bacteria → Acidobacteria	3095	Open in IMG/M
3300018034\|Ga0187863_10006679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	7868	Open in IMG/M
3300018058\|Ga0187766_10272381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1089	Open in IMG/M
3300018086\|Ga0187769_10123391	All Organisms → cellular organisms → Bacteria → Acidobacteria	1879	Open in IMG/M
3300018088\|Ga0187771_11366973	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300018088\|Ga0187771_11823806	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300018090\|Ga0187770_10522665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	940	Open in IMG/M
3300018468\|Ga0066662_10722454	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300019275\|Ga0187798_1546896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	782	Open in IMG/M
3300020581\|Ga0210399_11311766	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300020582\|Ga0210395_10000008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	330886	Open in IMG/M
3300020582\|Ga0210395_10010737	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	6813	Open in IMG/M
3300021180\|Ga0210396_10060390	All Organisms → cellular organisms → Bacteria	3461	Open in IMG/M
3300021181\|Ga0210388_10725738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	864	Open in IMG/M
3300021401\|Ga0210393_10954929	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300021405\|Ga0210387_10010644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	7066	Open in IMG/M
3300021420\|Ga0210394_10000010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	490733	Open in IMG/M
3300021433\|Ga0210391_10090535	All Organisms → cellular organisms → Bacteria → Acidobacteria	2414	Open in IMG/M
3300021476\|Ga0187846_10237917	Not Available	758	Open in IMG/M
3300021478\|Ga0210402_10160873	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300021858\|Ga0213852_1251324	All Organisms → cellular organisms → Bacteria → Acidobacteria	1407	Open in IMG/M
3300022721\|Ga0242666_1100940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	667	Open in IMG/M
3300026291\|Ga0209890_10000439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19419	Open in IMG/M
3300026291\|Ga0209890_10233088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	579	Open in IMG/M
3300027590\|Ga0209116_1067316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	780	Open in IMG/M
3300027625\|Ga0208044_1029283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1888	Open in IMG/M
3300027812\|Ga0209656_10000150	All Organisms → cellular organisms → Bacteria → Acidobacteria	44676	Open in IMG/M
3300027812\|Ga0209656_10000269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	34731	Open in IMG/M
3300027825\|Ga0209039_10215063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	777	Open in IMG/M
3300027825\|Ga0209039_10216377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	774	Open in IMG/M
3300027826\|Ga0209060_10000005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1646713	Open in IMG/M
3300027826\|Ga0209060_10083642	All Organisms → cellular organisms → Bacteria → Acidobacteria	1503	Open in IMG/M
3300027842\|Ga0209580_10001965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	9077	Open in IMG/M
3300027854\|Ga0209517_10002208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27912	Open in IMG/M
3300027854\|Ga0209517_10028499	All Organisms → cellular organisms → Bacteria	4784	Open in IMG/M
3300027857\|Ga0209166_10020077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	4183	Open in IMG/M
3300027867\|Ga0209167_10004447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	7093	Open in IMG/M
3300027879\|Ga0209169_10002149	All Organisms → cellular organisms → Bacteria → Acidobacteria	11955	Open in IMG/M
3300027884\|Ga0209275_10330326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300027895\|Ga0209624_10324942	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1025	Open in IMG/M
3300027905\|Ga0209415_10566894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300027911\|Ga0209698_10008879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	10329	Open in IMG/M
3300027911\|Ga0209698_10031115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	4880	Open in IMG/M
3300027911\|Ga0209698_10860066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	682	Open in IMG/M
3300028012\|Ga0265346_100842	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300028800\|Ga0265338_10001262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	41722	Open in IMG/M
3300028906\|Ga0308309_10083625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2422	Open in IMG/M
3300030659\|Ga0316363_10152453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	990	Open in IMG/M
3300031231\|Ga0170824_101773336	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300031421\|Ga0308194_10105231	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300031718\|Ga0307474_10000960	All Organisms → cellular organisms → Bacteria	20818	Open in IMG/M
3300031962\|Ga0307479_10377798	All Organisms → cellular organisms → Bacteria → Acidobacteria	1401	Open in IMG/M
3300032160\|Ga0311301_11488844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	835	Open in IMG/M
3300032160\|Ga0311301_13012045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	506	Open in IMG/M
3300032782\|Ga0335082_10385300	All Organisms → cellular organisms → Bacteria → Acidobacteria	1267	Open in IMG/M
3300032783\|Ga0335079_10000010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	295960	Open in IMG/M
3300032783\|Ga0335079_10477117	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300032805\|Ga0335078_10000059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	207112	Open in IMG/M
3300032805\|Ga0335078_10126893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	3643	Open in IMG/M
3300032828\|Ga0335080_10157540	All Organisms → cellular organisms → Bacteria → Acidobacteria	2513	Open in IMG/M
3300032829\|Ga0335070_10003957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17260	Open in IMG/M
3300032893\|Ga0335069_11764638	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300032895\|Ga0335074_10212931	All Organisms → cellular organisms → Bacteria → Acidobacteria	2334	Open in IMG/M
3300032898\|Ga0335072_10225465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2186	Open in IMG/M
3300032898\|Ga0335072_10756074	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300032954\|Ga0335083_10050080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	4430	Open in IMG/M
3300032955\|Ga0335076_10019256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	6847	Open in IMG/M
3300033405\|Ga0326727_10265650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1745	Open in IMG/M
3300033405\|Ga0326727_11168325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300033977\|Ga0314861_0000032	All Organisms → cellular organisms → Bacteria	220280	Open in IMG/M
3300033977\|Ga0314861_0004275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12771	Open in IMG/M
3300033977\|Ga0314861_0093048	All Organisms → cellular organisms → Bacteria → Acidobacteria	1555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.77%
Host-Associated	Host-Associated	1.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.60%
Aquatic	Environmental → Aquatic	27.16%
Plants	Host-Associated → Plants	1.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.14%
Freshwater	Environmental → Aquatic → Freshwater	16.67%
Sediment	Environmental → Aquatic → Sediment	10.49%
Peat	Environmental → Terrestrial → Peat	1.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.23%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.62%
Cave	Environmental → Terrestrial → Cave	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	22.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.05%
Loam	Environmental → Terrestrial → Soil → Loam	11.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.41%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	9.26%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.41%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.32%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.47%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.47%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.23%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.23%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.62%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.62%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.62%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028012	Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE4	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100340192	3300000567	Peatlands Soil	MAMNELSSDTPRTAVSKKPYEKPSFRFEQVFVTTALSCGKVNPTDANCINSTLSAS*
JGI12270J11330_100351522	3300000567	Peatlands Soil	MAMNSTSSDNRPEATKKPYEKPSFRFEQVFVTTALSCGKVGTTQSACIARPSAS*
JGI12270J11330_100557602	3300000567	Peatlands Soil	MTMNDVSSDNPRTPATKKPYEKPSFRYEKVFVTTALFCGKMNTTQLSCTHNLSAS*
JGI26339J46600_100346283	3300003218	Bog Forest Soil	MAMNDVSDNPTTPVIKKPYEKPSFRYEQVFVTTALSCGKVAGTQGNCLHLGSAS*
JGI26341J46601_100032732	3300003219	Bog Forest Soil	MTMNDLSPDHPRTPVTRQPYEKPSFRYEKVFVTTALSCGKIGTSSMACASSSKVS*
JGI26340J50214_100474402	3300003368	Bog Forest Soil	MATNDLSSDTMNTPVMTKKPYEKPAFRHEQVFVTTALTCGKLGGTQGSCGIVGKVS*
JGIcombinedJ51221_101285782	3300003505	Forest Soil	MTMNDMSSDNARTADAKKPYEKPSFRYEKVFVTTALSCGKTANSGGGCTLNSKVS*
Ga0058904_14188972	3300004100	Forest Soil	MAMNNSSSDSPRTAGTKKPYEKPAFRYEQVFVTTALSCGKVGTNTANCIAHSSSS*
Ga0062386_1000052628	3300004152	Bog Forest Soil	MATNDLSSDTTNAPITKKPYEKPAFRHEQVFVTTALTCAKISATQGGCFTSKVS*
Ga0062386_1005329723	3300004152	Bog Forest Soil	MTMKDLSSDNPRTSVTRQPYEKPSFRYEKVFVTSALSCGKISSTQGSCSPGSTKAS*
Ga0058899_114639002	3300004631	Forest Soil	MAMNESSTDNPRTPVSKQPYEKPSFRFEQVFVTTAISCGKVSSTDSGCIHRPSAS*
Ga0066690_101103153	3300005177	Soil	MDMNDTSEPTLAATPKKPYEKPSFRYEQVFVTTALSCGKISSTQLSCSGGNTKAS*
Ga0070709_105405183	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VSLMTMNSPSNDNSTTSPTKQPYEKPSFRYEKVFVTTALSCGKIGATSAACAASPKVS*
Ga0070714_10000031213	3300005435	Agricultural Soil	MTKNEMSSDTPRTPQTKKQYEKPSFRHEQVFVTTALSCTKINPTQGSCAPVGSAS*
Ga0070714_1015315592	3300005435	Agricultural Soil	MTMNSPSNDNSTTSPTKQPYEKPSFRYEKVFVTTALSCGKIGATSAACAASPKVS*
Ga0070710_110424911	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTMNSTSNDNAGTPVTKQPYEKPSFRYEKVFVTTALTCGKIGISSASCAGNQKVS*
Ga0070734_1000015238	3300005533	Surface Soil	MDMAMKDSSPDQPGTPGTKKPYEKPSFRFEQVFVTTALACGKISVTQSTCTGNTKVS*
Ga0070734_100815874	3300005533	Surface Soil	MAMNDLSSDVSRTPLAKKPYEKPSFRYEQVFVTTALSCGKVGATSQNCINHPSAS*
Ga0070735_100683702	3300005534	Surface Soil	MAMNNSSSDSPRTAGTKKPYEKPAFRYEQVFVTTALSCGKVGTGTANCIAHSSSS*
Ga0070730_100772653	3300005537	Surface Soil	MTMNETSSENPRTPETKKQYEKPSFRYEQVFVTTALSCSKINPTQGNCAPIGSAS*
Ga0070733_1000015756	3300005541	Surface Soil	MAMNDSSSDNPRSTVSKKPYEKPSFRFEQVFVTTALSCGKIAGTQSNCILSNGSAS*
Ga0070732_100029247	3300005542	Surface Soil	MDMKDSSSDTQRTEVAKKPYEKPAFRHEQVFVTTALACGKITNTQSGCNLNTKIS*
Ga0070732_100333285	3300005542	Surface Soil	MDMNDSSENSPALVTKKPYEKPSFRYEQVFVTTALSCGKISLTQSSCQGLNIKAS*
Ga0070732_103582391	3300005542	Surface Soil	MDMNDTSSDKPRTVETTKKPYEKPSFRFEKVFVTTALSCGKTTITQSGCGLNLKVS*
Ga0070761_100084195	3300005591	Soil	MNTNGSSSEIQRTAVAKKPYEKPTFRYEKVFVTSALTCGKITSTQSGCGLNTRVS*
Ga0070761_110096572	3300005591	Soil	MTMNDLSSDNPRTLDSKKPYEKPSFRYEKVFVTSALSCGKVGYTQSSCTGSNNKVS*
Ga0066789_100062823	3300005994	Soil	MAMNEMSSENQRTPVTRKPYEKPSFRYEQVFVTTALSCGKIDPTGCIGHTSAS*
Ga0066789_103703452	3300005994	Soil	MAMNEMSSENQRAPVTRKPYEKPSFRYEQVFVTTALSCGKIDPTSSGCIGHTSAS*
Ga0070717_100026138	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTMNSPSNDNSTTSPTKQPYEKPSFRYEKVFVTTALSCGKIGATSAA
Ga0075029_1000195091	3300006052	Watersheds	MEINDSSPGTPGAAASSRKPYEKPSFRYEQVFVTTALNCGKVDPLQATCHSNLQAS*
Ga0075029_1000662183	3300006052	Watersheds	MTTNDSSSDNTRTLVPKKPYEKPAFRYEQVFVTTALSCGKLSPATQGSCVGNGSAS*
Ga0075029_1005511932	3300006052	Watersheds	MDMNDSSENSPALVTKKPYEKPSFRYEQVFVTTALSCGKISVTQSSCQGLSIKAS*
Ga0075017_1000314963	3300006059	Watersheds	MATNDFSSETPKTPTTKKPYEKPAFRHEQVFVTTALSCGKVGTQISCASAIKAS*
Ga0075017_1000476472	3300006059	Watersheds	MTTNDSSSDNARTPVPKKPYEKPAFRYEQVFVTTALSCGKLSPATQGSCVGNGSAS*
Ga0075019_100123545	3300006086	Watersheds	MNDTSEPTQSATPKKPYEKPSFRHEQVFVTTALSCGKISSTSTSCIGRTSAS*
Ga0075015_1005543551	3300006102	Watersheds	MDMNDSTENSPALVTKKTYEKPSFRYEQVFVTTALSCGKISVTQSSCQGLSIKAS*
Ga0075015_1007754251	3300006102	Watersheds	ARTPAAKKPYEKPSFRHEQVFVTTALSCGKISITQVNCTSTTTKAS*
Ga0075030_1000176912	3300006162	Watersheds	MAMNELPSSDSSHTPVTKKPYEKPAFRYEQVFVTTALACGKIATQGSCFQQSSAS*
Ga0075030_1000356645	3300006162	Watersheds	MAMNDSPDTPHIATTKKPYEKPSFRSEQVFVTTALACGKISITQSGCAGNTKVS*
Ga0075030_1010889822	3300006162	Watersheds	MDINDSSENSPALVTKKPYEKPSFRYEHVFVTTALSCGKISVTQSSCQGLSIKAS*
Ga0075014_1004993432	3300006174	Watersheds	MDMNDSSENSPALVTKKPYEKPSFRYEQVFVTTALSCGKISVTQSSC
Ga0070765_1000511765	3300006176	Soil	MAMNDLSSDNPRTPVAKKPYEKPSFRYEQVFVTTALSCGKIGGTGGGCAGTTKVS*
Ga0070765_1000819271	3300006176	Soil	MNTNGSSSETQRTAVAKKPYEKPTFRYEKVFVTSALTCGKITSTQSGCGLNTRVS*
Ga0116214_12657842	3300009520	Peatlands Soil	PAAKKPYEKPSFRHEQVFLTTALSCGKISITQVNCTSTTTKAS*
Ga0116214_12749861	3300009520	Peatlands Soil	MNSTSSDNRPEATKKPYEKPSFRFEQVFVTTALSCGKVGTTQSACIARPSAS*
Ga0116221_10006643	3300009523	Peatlands Soil	MNELSSDTPRTAVSKKPYEKPSFRFEQVFVTTALSCGKVNPTDANCINSTLSAS*
Ga0074046_106255471	3300010339	Bog Forest Soil	GRLIMATNDLSSDTTNAPITKKPYEKPAFRHEQVFVTTALTCAKISATQGGCFTSKVS*
Ga0074045_100239656	3300010341	Bog Forest Soil	MNDLSSDNAPSPVAKKPYEKPAFRFEQVFVTTALNCSKIGGTQGNCKGITGKAS*
Ga0074045_109244062	3300010341	Bog Forest Soil	SDNPRASVIKKPYEKPSFRYEQVFVTTALSCGKVAGTQGNCLHLGSAS*
Ga0074044_103910092	3300010343	Bog Forest Soil	MAMNDTSSDTPRTLATKKPYEKPSFRFEQVSVTTALSCGKVGNISSNCIGSPKAS*
Ga0136449_1007152822	3300010379	Peatlands Soil	MDMNDTSSEPRTAATAKKPYEKPSFRCEKVFVTTALSCGKVNPTDAACRGINNKSS*
Ga0136449_1022445531	3300010379	Peatlands Soil	MNDVSDNPSTPVIKKPYEKPAFRYEQVFVTTALSCGKVSPTQANCHTAPAAS*
Ga0126383_115826411	3300010398	Tropical Forest Soil	MNDTSSDTPRTPETQKKAYEKPSFRFEQVFVTTALACGKVSTTDSNCI
Ga0150983_119744001	3300011120	Forest Soil	MTMNDLSSDNPRTPVTKQPYEKPSFRYEKVFVTSALTCGKISHTDAACGTLKVS*
Ga0150983_163135022	3300011120	Forest Soil	MNESSTDNPRTPVSKQPYEKPSFRFEQVFVTTAISCGKVSSTDSGCIHRPSAS*
Ga0137382_100274123	3300012200	Vadose Zone Soil	MDMNGASEPTLAATSKKPYEKPSFRYEQVFVTTALSCGKISSTQLSCSGGNTKAS*
Ga0137372_107904422	3300012350	Vadose Zone Soil	MAINESSTDSSGAVLSKKPYEKPTFRYEQVFVTTALSCGKISPTDSGCMSNLKLS*
Ga0164301_106034111	3300012960	Soil	NETSSDAPQVPVTKKPYEKPSFRHEQVFVTTALSCGKTSPVGGGCASLRAS*
Ga0181521_100165023	3300014158	Bog	MDQVLPMAMNDVSDNPRTPVIKKPYEKPSFRYEQVFVTTALSCGKVAGTQGNCLHLGSAS
Ga0181532_100001349	3300014164	Bog	MNMSDMSSNNPRTSVSKQPYEKPSFRHEKVFVTTALSCGKVGATQSSCIGHSSAS*
Ga0181532_100089784	3300014164	Bog	MTMNDLSHDHPRTPVTRRPYEKPSFRCEKVFVTTALSCGKVGTTSLACASSSKVS*
Ga0182019_102868822	3300014498	Fen	MDMKELSSDTLRTAVNKKPYEKPSFRHEKVFVTTALSCGKINVTQGSCAANLSAS*
Ga0167658_10304943	3300015195	Glacier Forefield Soil	MNDSSSENPRTSSGKKPYEKPSFRFEQAFVTTALSCGKVTVTQSGCGLSTKSS*
Ga0181505_102003381	3300016750	Peatland	MNMSDMSSNNPRTSVSKQPYEKPSFRHEKVFVTTALSCGKVGATQSSCIGHSSAS
Ga0187802_100604902	3300017822	Freshwater Sediment	MAMNDSLCDNPPNPVTKKPYEKPSFRFEQVFVTTALSCTKSGTQSQCQLGPQKVS
Ga0187818_1000053111	3300017823	Freshwater Sediment	MAMNDVSDNPRTPVIKKPYEKPTFRYEQVFVTTALSCGKVAGTQGNCLHLGSAS
Ga0187818_100237352	3300017823	Freshwater Sediment	MAMNDSLSDNPPNPVIKKPYEKPSFRFEQVFVTTALSCTKSGTQSTCNLGPQKVS
Ga0187818_101837582	3300017823	Freshwater Sediment	MAMNDSSSDNPRTPVAKKPYEKPAFRYEQVFVTTALSCGKVNPTQGTCVGLTSAS
Ga0187825_102425722	3300017930	Freshwater Sediment	MDKNDLSSDKPQTAVAKKPYEKPSFRFEQVFVTTALACGKIDNTQSGCGLNTKLS
Ga0187801_100338142	3300017933	Freshwater Sediment	MEMNQTSEPTQAATPKKPYEKPSFRHEQVFVTTALSCGKISSTQSSCIGHSSAS
Ga0187801_103510222	3300017933	Freshwater Sediment	RFPPMAMNDVSDNPRTPVIKKPYEKPTFRYEQVFVTTALSCGKVAGTQGNCLHLGSAS
Ga0187821_100082232	3300017936	Freshwater Sediment	MDKNDLSSDKPQTAVAKKPYEKPSFRFEQVFVTTALACGKNDNTQSGCGLNTKLS
Ga0187821_101402262	3300017936	Freshwater Sediment	MDMNDSSEKPQTAVAKKPYEKPSFRFEQVFVTTALACGKIDNTQSGCGLNTKLS
Ga0187781_100467072	3300017972	Tropical Peatland	MTTNDEFSDPRALVTRKPYEKPSFRYERVFVTTALSCGKVQPTQAGCGAGFGNASAS
Ga0187781_100708123	3300017972	Tropical Peatland	MTMNNVASDNPSTPATKQPYEKPSFRYEKVFVTTALACGKVSTTQSSCFHSLSAS
Ga0187782_100177234	3300017975	Tropical Peatland	MTTNDSSVDNPRTPVTKKPYEKPAFRYEQVFVTTALTCGKISGTSATCNINPKVS
Ga0187782_106766052	3300017975	Tropical Peatland	MTTNDEFSDPRALVTRKPYEKPSFRYERVFVTTALSCGKVQPTQAGCGAGF
Ga0187816_104076382	3300017995	Freshwater Sediment	MAMNDSLSDNPPNPVIKKPYEKPSFRFEQVFVTTALSCTKSGTQSTC
Ga0187804_101176072	3300018006	Freshwater Sediment	MEMNQTSEPTQSATPKKPYEKPSFRHEQVFVTTALSCGKISSTQSSCIGHSSAS
Ga0187805_100174562	3300018007	Freshwater Sediment	MTMNDLSHDHPRSPVTRQPYEKPSFRYEKVFVTTALSCGKIGTSSLSCASSSKVS
Ga0187863_100066793	3300018034	Peatland	MTMNDLSHDNPRTPVTRQPYEKPSFRYEKVFVTTALSCGKIGTSSLACAGSSKVS
Ga0187766_102723812	3300018058	Tropical Peatland	MNDASDKPSTTESGKKPYEKPSFRFEQVFVTSALSCGKSSATQASCNPAAGGTVKAS
Ga0187769_101233912	3300018086	Tropical Peatland	MAMNDVSPDNPRTAAPKKPYEKPAFRYEQVFVTTALSCGKVASTESGCVLSTKAS
Ga0187771_113669732	3300018088	Tropical Peatland	MAMNDSSSDNSRTPVAKKPYEKPSFRYEQVFVTTALACGKIGSTSMSCTNNPKVS
Ga0187771_118238061	3300018088	Tropical Peatland	MAMNDASAENPRTPAAKKPYEKPAFRYEQVFVTTALACGKISATQSGCTLNTKNS
Ga0187770_105226652	3300018090	Tropical Peatland	MAMKAASPENSRTPAAKKPYEKPAFRYEQVFVTTALACGKISATQSGCTLNTKNS
Ga0066662_107224542	3300018468	Grasslands Soil	MAMDNSSSNQASAIESKKPYEKPAFRYEQVFVTTALTCGKIDGTETSCHHNHKVS
Ga0187798_15468961	3300019275	Peatland	MAMNDVSPDNPRTGAPKKPYEKPAFRYEQVFVTTALSCGKVASTESGCVLSTKAS
Ga0210399_113117661	3300020581	Soil	DRVPLMAMNNSSSDSPRTAGTKKPYEKPAFRYEQVFVTTALSCGKVGTGTANCIAHSSSS
Ga0210395_10000008213	3300020582	Soil	MTMNDLSSDNPRTPVTKQPYEKPSFRYEKVFVTSALTCGKISHTDAACGTLKVS
Ga0210395_100107373	3300020582	Soil	MTMNDMSSDNARTADAKKPYEKPSFRYEKVFVTTALSCGKTANSGGGCTLNSKVS
Ga0210408_102656582	3300021178	Soil	MEMNDSSSDTPRTAETTKKPYEKPSFRHEQVFVTTALSCGKISPTQGTCGTQMSAS
Ga0210396_100603902	3300021180	Soil	MTMNDMSSDNPRTADAKKPYEKPSFRYEKVFVTTALSCGKTANSGGGCTLNSKVS
Ga0210388_107257382	3300021181	Soil	MDMNDTSSDNQNPPVTKKPYEKPAFRYERVFVTSALTCGKIDPTSMTCHNNANAS
Ga0210393_109549291	3300021401	Soil	TNQVPLMAMNDSSDNSRVPSTKKPYEKPSFRYEKVFVTSALTCGKISATQGACSVSKSS
Ga0210385_107208252	3300021402	Soil	MAINDSSSDNSRSSGSKKPYEKPSFRFEQVFVTTALSCGKITVTQS
Ga0210387_100106442	3300021405	Soil	MTMNDSSHDNPRTPVTRQPYEKPSFRYEKVFVTTALSCGKIGTSSLSCASSSKVS
Ga0210394_10000010120	3300021420	Soil	MAMNNISSDSPRTAGTKKPYEKPAFRYEQVFVTTALSCGKVGTNTANCIAHSSSS
Ga0210391_100905353	3300021433	Soil	MNTNGSSSEIQRTAVAKKPYEKPTFRYEKVFVTSALTCGKITSTQSGCGLNTRVS
Ga0187846_102379172	3300021476	Biofilm	MDMNETTEPQNTETQKKAYEKPTFRYEQVFVTTALSCGKIATQSNCQHAGSAS
Ga0210402_101608734	3300021478	Soil	MTKNEMSSDTPRAPETKKQYEKPSFRYEQVFVTTALSCSKINPTQGSCAPIGSAS
Ga0213852_12513243	3300021858	Watersheds	MTTNDSSSDNTRTLVPKKPYEKPAFRYEQVFVTTALSCGKLSPATQGSCVGNGSAS
Ga0242663_10449182	3300022523	Soil	MAMNNSSSDSPRTVGTKKPYEKPAFRYEQVFVTTALSCGKVGTGTANCIAHSSSS
Ga0242666_11009402	3300022721	Soil	MTMNDLSSDNPRTLDSKKPYEKPSFRYEKVFVTSALSCGKVGYTQSSCTGSNNKVS
Ga0209890_1000043916	3300026291	Soil	MAMNEMSSENQRTPVTRKPYEKPSFRYEQVFVTTALSCGKIDPTGCIGHTSAS
Ga0209890_102330882	3300026291	Soil	MAMNEMSSENQRAPVTRKPYEKPSFRYEQVFVTTALSCGKIDPTSSGCIGHTSAS
Ga0209116_10673161	3300027590	Forest Soil	MTMNDLSHDNPRTPVTRRPYEKPSFRYEKVFVTTALACSKIGTSSLACASSSKV
Ga0208044_10292832	3300027625	Peatlands Soil	MAMNELSSDTPRTAVSKKPYEKPSFRFEQVFVTTALSCGKVNPTDANCINSTLSAS
Ga0209656_1000015020	3300027812	Bog Forest Soil	MTMNDLSPDHPRTPVTRQPYEKPSFRYEKVFVTTALSCGKIGTSSMACASSSKVS
Ga0209656_100002693	3300027812	Bog Forest Soil	MATNDLSSDTMNTPVMTKKPYEKPAFRHEQVFVTTALTCGKLGGTQGSCGIVGKVS
Ga0209039_102150631	3300027825	Bog Forest Soil	MAMNDVSDNPTTPVIKKPYEKPAFRYEQVFVTTALSCGKVAGTQGNCLHLGSAS
Ga0209039_102163771	3300027825	Bog Forest Soil	MAMNDVSDNPTTPVIKKPYEKPSFRYEQVFVTTALSCGKVAGTQGNCLHLGSAS
Ga0209060_100000051262	3300027826	Surface Soil	MDMAMKDSSPDQPGTPGTKKPYEKPSFRFEQVFVTTALACGKISVTQSTCTGNTKVS
Ga0209060_100836423	3300027826	Surface Soil	MAMNDLSSDVSRTPLAKKPYEKPSFRYEQVFVTTALSCGKVGATSQNCINHPSAS
Ga0209580_100019657	3300027842	Surface Soil	MDMKDSSSDTQRTEVAKKPYEKPAFRHEQVFVTTALACGKITNTQSGCNLNTKIS
Ga0209580_100742073	3300027842	Surface Soil	MDMNDSSENSPALVTKKPYEKPSFRYEQVFVTTALSCGKISLTQSSCQGLNIKAS
Ga0209580_102988332	3300027842	Surface Soil	MDMNDTSSDKPRTVETTKKPYEKPSFRFEKVFVTTALSCGKTTITQSG
Ga0209517_1000220818	3300027854	Peatlands Soil	MAMNSTSSDNRPEATKKPYEKPSFRFEQVFVTTALSCGKVGTTQSACIARPSAS
Ga0209517_100284991	3300027854	Peatlands Soil	MAMNDVSDNPSTPVIKKPYEKPAFRYEQVFVTTALSCGKVSPTQANCHTAPAAS
Ga0209166_100200772	3300027857	Surface Soil	MTMNETSSENPRTPETKKQYEKPSFRYEQVFVTTALSCSKINPTQGNCAPIGSAS
Ga0209167_100044477	3300027867	Surface Soil	MAMNDSSSDNPRSTVSKKPYEKPSFRFEQVFVTTALSCGKIAGTQSNCILSNGSAS
Ga0209169_100021496	3300027879	Soil	MNTNGSSSETQRTAVAKKPYEKPTFRYEKVFVTSALTCGKITSTQSGCGLNTRVS
Ga0209275_103303261	3300027884	Soil	MTMNDSSHDNPRTPVTRQPYEKPSFRYEKVFVTTALSCGKIGTSSLSCAS
Ga0209624_103249422	3300027895	Forest Soil	MAINDSSSDNTQTASSKKQYEKPSFRFEQVFVTTALGCGKVSSTQANCVSHQSAS
Ga0209067_105272571	3300027898	Watersheds	MDMNDSSGNSPALVTKKPYEKPSFRYEQVFVTTALSCGKISVTQSSCQGLSIKAS
Ga0209415_105668942	3300027905	Peatlands Soil	MTMNDMHSDNPPAADAKKPYEKPSFRYEKVFVTSALSCGKTANSGGGCSLNSKVS
Ga0209698_100088793	3300027911	Watersheds	MAMNELPSSDSSHTPVTKKPYEKPAFRYEQVFVTTALACGKIATQGSCFQQSSAS
Ga0209698_100311152	3300027911	Watersheds	MAMNDSPDTPHIATTKKPYEKPSFRSEQVFVTTALACGKISITQSGCAGNTKVS
Ga0209698_101296592	3300027911	Watersheds	MDINDSSENSPALVTKKPYEKPSFRYEHVFVTTALSCGKISVTQSSCQGLSIKAS
Ga0209698_108600662	3300027911	Watersheds	MATNDSSSDNARTPAAKKPYEKPAFRYEQVFVTTALSCGKINPSQLNCSGLNQKAS
Ga0265346_1008423	3300028012	Plant Litter	GSSSEIQRTAVAKKPYEKPTFRYEKVFVTSALTCGKITSTQSGCGLNTRVS
Ga0307504_100669052	3300028792	Soil	MDENHTSENSQIVVVKKPYEKPSFRHEQVFVTTALSCGKISSTQNSCIGHASAS
Ga0265338_1000126228	3300028800	Rhizosphere	MDMNNLSSDTPRTAETNKKPYEKPSFRHEKVFVTTALSCGKVNVTQGSCAANLSAS
Ga0265338_102244372	3300028800	Rhizosphere	MDSNHISSGEESPLTATTKKPYEKPSFRCEQVFVTTALSCGKIDPTQLNCMGGQSKVS
Ga0308309_100836255	3300028906	Soil	MAMNDLSSDNPRTPVAKKPYEKPSFRYEQVFVTTALSCGKIGGTGGGCAGTTKVS
Ga0316363_101524532	3300030659	Peatlands Soil	MTMNDVSSDNPRTPATKKPYEKPSFRYEKVFVTTALFCGKMNTTQLSCTHNLSAS
Ga0170824_1017733362	3300031231	Forest Soil	MTMNDMSSDNPRTQVSKKPYEKPSFRFEQVFVTTALSCGKVGTTQSSCISRPSAS
Ga0308194_101052312	3300031421	Soil	MAINNSSSNPPNAATSAKKPYEKPSFRFEEVFVTTALSCGKVGTELNCTGSVKLS
Ga0307474_1000096026	3300031718	Hardwood Forest Soil	MAMNDLSSDNPSAPATKKPYEKPAFRCEQVFVTTALSCGKISITQVNCTSTTLKAS
Ga0307479_103777983	3300031962	Hardwood Forest Soil	MAMNDSSSDQPSTPATEKKPYEKPSFRFEQVFVTTALTCGKVGPTQGNCTGVTSRAS
Ga0311301_114888441	3300032160	Peatlands Soil	MNDVSDNPSTPVIKKPYEKPAFRYEQVFVTTALSCGKVSPTQANCHTAPAAS
Ga0311301_130120452	3300032160	Peatlands Soil	MTMNDMHSDNPPAADAKKPYEKPSFRYEKVFVTSALSCGKTANSGGGCSL
Ga0307472_1007457462	3300032205	Hardwood Forest Soil	MEMNDTSEPRKAATPKKPYEKPSFRHEQVFVTTALSCGKISSTQNSCIGHSSAS
Ga0335082_103853002	3300032782	Soil	MTINNSSSDRSPEATTAKKPYEKPSFRFEEVFVTTALSCGKTDPSQQTCLITPKVS
Ga0335079_1000001074	3300032783	Soil	MDMNNSSPDTPRTSAGAKKPYEKPSFRFEQVFVTTALACGKTDPLQSSCHSNLQSS
Ga0335079_104771172	3300032783	Soil	MAMATKDSSSDFLGAPGTKKPYEKPSFRFEQVFVTTALACGKISVTQVTCSGNTKVS
Ga0335078_1000005997	3300032805	Soil	MATNDQSVDNPRTPIAKKPYEKPSFRYEEVFVTTALTCGKMTGSTQGTCSLNPKAS
Ga0335078_101268932	3300032805	Soil	MTTNDQSSDNPRTPAPRKPYEKPSFRFEKVFVTTALACGKMSTTQGQCMHNLSAS
Ga0335080_101575402	3300032828	Soil	MAMNDSSSDNPRTPIAKKPYEKPAFRFEQVFVTTALTCGKITVTQSGCGLVQKAS
Ga0335070_100039572	3300032829	Soil	MAMNDSSPDQGITQVEKKPYEKPSFRYEQVFVTTALSCGKVSNVNTNCIGHQSAS
Ga0335069_117646382	3300032893	Soil	EDRQQTDRQVLPMAMNDSSPDQGITQVEKKPYEKPSFRYEQVFVTTALSCGKVSNVNTNCIGHQSAS
Ga0335074_102129312	3300032895	Soil	MAMNDPSSENTSKESSKKPYEKPAFRYEQVFVTTALACGKIGASSMSCSNNPKVS
Ga0335072_102254653	3300032898	Soil	MTVNSSSDQPLSLENTKKPYEKPSFRHEQVFVTTALSCGKVSEVQQQCALTTLSAS
Ga0335072_107560742	3300032898	Soil	MDMHDSSSNKPQTIAAKKPYEKPSFRFEQVFVTTALSCGKISASQGGCTTPLSVKVS
Ga0335083_100500805	3300032954	Soil	MAINDSSSDTPRAEVSKKPYEKPSFRFEQVFVTTALSCGKMASTQSNCSSPKSS
Ga0335076_100192562	3300032955	Soil	MNMNEESSENPQAPVAKKPYEKPSFRYEQVFVTTALACGKVGGLSQACLQQPSAS
Ga0335073_100391933	3300033134	Soil	MTMKDSPLEKPETEEAAKKPYEKPSFRFEEVFVTTALSCGKTPFTSSGCVGASKS
Ga0326727_102656504	3300033405	Peat Soil	NDLSHDHPRTPVTRQPYEKPSFRYEKVFVTTALSCGKVGNTSMSCASSSKVS
Ga0326727_111683252	3300033405	Peat Soil	MTMNDLSHDHPRTPVTRQPYEKPSFRYEKVFVTTALSCGKVGNTSLSCASSSKVS
Ga0314861_0000032_49608_49769	3300033977	Peatland	MNDFSSDTPCAPTVKKPYEKPSFRYEQVFVTTALTCGKQAGTQGDCLLNPKNS
Ga0314861_0004275_8506_8673	3300033977	Peatland	MTTNEVSSDNPRTPVAKKPYEKPSFRHEKVFVTTALACGKVSSTQSQCLQSMSAS
Ga0314861_0093048_466_639	3300033977	Peatland	MTKNHESSDPRALVTRKPYERPSFRYEKVFVTTALSCGKVQPTQAGCGAGFGNASSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences