NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F040130

Metagenome / Metatranscriptome Family F040130

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F040130
Family Type Metagenome / Metatranscriptome
Number of Sequences 162
Average Sequence Length 52 residues
Representative Sequence MPGSVKRAVAIVAGVVLGMLIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV
Number of Associated Samples 126
Number of Associated Scaffolds 162

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.29 %
% of genes near scaffold ends (potentially truncated) 16.67 %
% of genes from short scaffolds (< 2000 bps) 76.54 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.593 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere
(10.494 % of family members)
Environment Ontology (ENVO) Unclassified
(35.185 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.704 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 34.57%    β-sheet: 0.00%    Coil/Unstructured: 65.43%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 162 Family Scaffolds
PF00108Thiolase_N 37.65
PF007253HCDH 31.48
PF027373HCDH_N 11.11
PF02803Thiolase_C 5.56
PF06832BiPBP_C 3.09
PF00106adh_short 1.23
PF13561adh_short_C2 1.23
PF12418AcylCoA_DH_N 1.23
PF00313CSD 0.62
PF00756Esterase 0.62
PF11974bMG3 0.62
PF03795YCII 0.62
PF01979Amidohydro_1 0.62
PF12399BCA_ABC_TP_C 0.62
PF12806Acyl-CoA_dh_C 0.62
PF030614HBT 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 162 Family Scaffolds
COG0183Acetyl-CoA acetyltransferaseLipid transport and metabolism [I] 43.21
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 42.59
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 11.11
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 11.11
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 11.11
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 11.11
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 11.11
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 11.11
COG4953Membrane carboxypeptidase/penicillin-binding protein PbpCCell wall/membrane/envelope biogenesis [M] 3.09
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.62

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.59 %
UnclassifiedrootN/A7.41 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459004|F62QY1Z01BVU8WAll Organisms → cellular organisms → Bacteria → Proteobacteria508Open in IMG/M
3300002067|JGI24735J21928_10238189All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300002705|JGI25156J39149_1000360All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales29472Open in IMG/M
3300002705|JGI25156J39149_1011992All Organisms → cellular organisms → Bacteria1934Open in IMG/M
3300002705|JGI25156J39149_1016682All Organisms → cellular organisms → Bacteria1420Open in IMG/M
3300002738|JGI25154J39366_1020243All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300002772|JGI25164J39214_1020741All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300003323|rootH1_10094196All Organisms → cellular organisms → Bacteria → Proteobacteria1034Open in IMG/M
3300003752|Ga0055539_1000317All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria25090Open in IMG/M
3300003752|Ga0055539_1012447All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caldimonas → Caldimonas manganoxidans1045Open in IMG/M
3300003761|Ga0055535_1021105All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300003762|Ga0055542_1038636All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005176|Ga0066679_10567910All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300005327|Ga0070658_10144518All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1988Open in IMG/M
3300005327|Ga0070658_10467648All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1088Open in IMG/M
3300005327|Ga0070658_10624545All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300005327|Ga0070658_10686393All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caldimonas → Caldimonas manganoxidans889Open in IMG/M
3300005330|Ga0070690_100400630All Organisms → cellular organisms → Bacteria → Proteobacteria1008Open in IMG/M
3300005338|Ga0068868_100586971All Organisms → cellular organisms → Bacteria → Proteobacteria986Open in IMG/M
3300005356|Ga0070674_102056163All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300005364|Ga0070673_100100119All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2385Open in IMG/M
3300005366|Ga0070659_100800557All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae820Open in IMG/M
3300005366|Ga0070659_101400263All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005455|Ga0070663_100543113Not Available971Open in IMG/M
3300005456|Ga0070678_101776978All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae581Open in IMG/M
3300005457|Ga0070662_100322083All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1261Open in IMG/M
3300005459|Ga0068867_100405524All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caldimonas → Caldimonas manganoxidans1151Open in IMG/M
3300005459|Ga0068867_101159366All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae708Open in IMG/M
3300005466|Ga0070685_10156520All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium1449Open in IMG/M
3300005513|Ga0077120_1103525All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1211Open in IMG/M
3300005513|Ga0077120_1170014All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales757Open in IMG/M
3300005519|Ga0077119_10030400All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae4325Open in IMG/M
3300005519|Ga0077119_10079311All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1941Open in IMG/M
3300005519|Ga0077119_10243842All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales732Open in IMG/M
3300005519|Ga0077119_10248806All Organisms → cellular organisms → Bacteria → Proteobacteria719Open in IMG/M
3300005519|Ga0077119_10295700All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales618Open in IMG/M
3300005530|Ga0070679_101045835All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae761Open in IMG/M
3300005539|Ga0068853_100438929All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1226Open in IMG/M
3300005563|Ga0068855_100219713All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2131Open in IMG/M
3300005563|Ga0068855_100445610All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1413Open in IMG/M
3300005563|Ga0068855_102445999All Organisms → cellular organisms → Bacteria → Proteobacteria520Open in IMG/M
3300005564|Ga0070664_101361205All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300005577|Ga0068857_101386341All Organisms → cellular organisms → Bacteria → Proteobacteria683Open in IMG/M
3300005616|Ga0068852_102499508All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005646|Ga0075040_1883556All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caldimonas → Caldimonas manganoxidans548Open in IMG/M
3300005650|Ga0075038_11371077All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales660Open in IMG/M
3300005841|Ga0068863_101507250All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales681Open in IMG/M
3300006353|Ga0075370_10005019All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales6511Open in IMG/M
3300009093|Ga0105240_10492210All Organisms → cellular organisms → Bacteria → Proteobacteria1365Open in IMG/M
3300009098|Ga0105245_10983723All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300009148|Ga0105243_11470848All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300009500|Ga0116229_10283634Not Available1403Open in IMG/M
3300009500|Ga0116229_11055843All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria651Open in IMG/M
3300009649|Ga0105855_1248998All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300009649|Ga0105855_1273296All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales529Open in IMG/M
3300009660|Ga0105854_1014771All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquincola → Aquincola tertiaricarbonis2637Open in IMG/M
3300009662|Ga0105856_1238894All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300009686|Ga0123338_10347089All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales637Open in IMG/M
3300009709|Ga0116227_10089357All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2542Open in IMG/M
3300009709|Ga0116227_10280873All Organisms → cellular organisms → Bacteria → Proteobacteria1277Open in IMG/M
3300009787|Ga0116226_10064946All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3717Open in IMG/M
3300010152|Ga0126318_10294258All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300010375|Ga0105239_10090236Not Available3381Open in IMG/M
3300010375|Ga0105239_10252862All Organisms → cellular organisms → Bacteria1979Open in IMG/M
3300010876|Ga0126361_11215957Not Available518Open in IMG/M
3300010877|Ga0126356_10404744All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae707Open in IMG/M
3300011119|Ga0105246_10568030All Organisms → cellular organisms → Bacteria → Proteobacteria975Open in IMG/M
3300013306|Ga0163162_12509603All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300014168|Ga0181534_10083390All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1589Open in IMG/M
3300014497|Ga0182008_10188680All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1045Open in IMG/M
3300014969|Ga0157376_12009664All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300015262|Ga0182007_10153623All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae784Open in IMG/M
3300018414|Ga0194135_10465068All Organisms → cellular organisms → Bacteria → Proteobacteria842Open in IMG/M
3300021178|Ga0210408_10683476All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales809Open in IMG/M
3300021403|Ga0210397_10255210All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquincola → Aquincola tertiaricarbonis1274Open in IMG/M
3300021404|Ga0210389_10847928All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300021432|Ga0210384_10001044All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales39545Open in IMG/M
3300021475|Ga0210392_10323736All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1110Open in IMG/M
3300021478|Ga0210402_11429282All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300022561|Ga0212090_10185780All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1791Open in IMG/M
3300022870|Ga0247782_1010535All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1198Open in IMG/M
3300022908|Ga0247779_1003138All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales6958Open in IMG/M
3300025226|Ga0209674_100007All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1077082Open in IMG/M
3300025228|Ga0209672_112112All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1083Open in IMG/M
3300025230|Ga0209563_118385All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria821Open in IMG/M
3300025231|Ga0207427_101424All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales8703Open in IMG/M
3300025242|Ga0209258_100475All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales42279Open in IMG/M
3300025246|Ga0209646_1000053All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales284737Open in IMG/M
3300025253|Ga0209677_108565All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1964Open in IMG/M
3300025256|Ga0209759_1003124All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales6772Open in IMG/M
3300025256|Ga0209759_1035948All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales907Open in IMG/M
3300025909|Ga0207705_10049736All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3017Open in IMG/M
3300025909|Ga0207705_10654783All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae817Open in IMG/M
3300025909|Ga0207705_11483345All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300025913|Ga0207695_10021149All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales7432Open in IMG/M
3300025913|Ga0207695_10569003All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1014Open in IMG/M
3300025914|Ga0207671_10497303All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales972Open in IMG/M
3300025920|Ga0207649_11380043All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae557Open in IMG/M
3300025925|Ga0207650_11833506Not Available513Open in IMG/M
3300025927|Ga0207687_10468060All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1048Open in IMG/M
3300025932|Ga0207690_10232747All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1415Open in IMG/M
3300025932|Ga0207690_10356613All Organisms → cellular organisms → Bacteria → Proteobacteria1157Open in IMG/M
3300025933|Ga0207706_11741187All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300025935|Ga0207709_10607131All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300025949|Ga0207667_10016614All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales8308Open in IMG/M
3300025949|Ga0207667_10581045All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1131Open in IMG/M
3300025949|Ga0207667_10818468All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae927Open in IMG/M
3300025960|Ga0207651_10012035All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4873Open in IMG/M
3300025961|Ga0207712_11654964All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300026023|Ga0207677_11382221All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300026067|Ga0207678_10139224All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2071Open in IMG/M
3300026116|Ga0207674_10667220Not Available1004Open in IMG/M
3300026116|Ga0207674_10772760All Organisms → cellular organisms → Bacteria → Proteobacteria927Open in IMG/M
3300026116|Ga0207674_11242223All Organisms → cellular organisms → Bacteria → Proteobacteria715Open in IMG/M
3300027548|Ga0209523_1058772All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria789Open in IMG/M
3300028381|Ga0268264_11900790All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300028562|Ga0302151_10000151All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria42682Open in IMG/M
3300028562|Ga0302151_10071543Not Available1232Open in IMG/M
3300028666|Ga0265336_10000012All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales261478Open in IMG/M
3300028732|Ga0302264_1066728All Organisms → cellular organisms → Bacteria → Proteobacteria844Open in IMG/M
3300028762|Ga0302202_10279760All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300028764|Ga0302260_1114409All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales560Open in IMG/M
3300028783|Ga0302279_10000406All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales62346Open in IMG/M
3300028813|Ga0302157_10126117All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1558Open in IMG/M
3300028865|Ga0302291_10312658All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300029895|Ga0247043_1035918All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1206Open in IMG/M
3300029896|Ga0247044_1052095All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae853Open in IMG/M
3300029920|Ga0302142_1180368All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300029955|Ga0311342_10094495All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3199Open in IMG/M
3300029990|Ga0311336_10970963All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300030019|Ga0311348_10471931All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales937Open in IMG/M
3300030114|Ga0311333_10104607All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2114Open in IMG/M
3300030114|Ga0311333_10344224Not Available1195Open in IMG/M
3300030519|Ga0302193_10165825Not Available1267Open in IMG/M
3300030520|Ga0311372_10000316All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales117522Open in IMG/M
3300030520|Ga0311372_10009380All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales21746Open in IMG/M
3300030520|Ga0311372_10187110All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquincola → Aquincola tertiaricarbonis3493Open in IMG/M
3300030520|Ga0311372_13042421All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caldimonas505Open in IMG/M
3300030521|Ga0307511_10090550All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquincola → Aquincola tertiaricarbonis2077Open in IMG/M
3300030687|Ga0302309_10101116All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1552Open in IMG/M
3300030688|Ga0311345_10781868All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300030739|Ga0302311_10980770All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300030943|Ga0311366_10668789All Organisms → cellular organisms → Bacteria → Proteobacteria903Open in IMG/M
3300031232|Ga0302323_102058588All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300031543|Ga0318516_10037728Not Available2581Open in IMG/M
3300031616|Ga0307508_10880673All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300031716|Ga0310813_10018992Not Available4652Open in IMG/M
3300031724|Ga0318500_10004249All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4434Open in IMG/M
3300031726|Ga0302321_103649040All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300031730|Ga0307516_10009769All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales10643Open in IMG/M
3300031730|Ga0307516_10394346All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1044Open in IMG/M
3300031846|Ga0318512_10394503All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300031939|Ga0308174_11234016All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria638Open in IMG/M
3300031939|Ga0308174_11603384All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales559Open in IMG/M
3300031996|Ga0308176_12670038All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300032074|Ga0308173_10010826All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria5716Open in IMG/M
3300032074|Ga0308173_10964433All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria791Open in IMG/M
3300032954|Ga0335083_10137378All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2331Open in IMG/M
3300034130|Ga0370494_191095All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300034170|Ga0370487_0161714All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300034820|Ga0373959_0065649All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales811Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere10.49%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere8.02%
Arabidopsis RootHost-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root7.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.17%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen6.17%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog5.56%
Arabidopsis RootHost-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root5.56%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil3.70%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa3.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.09%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.09%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated3.09%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.47%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.47%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza2.47%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.85%
Glacier ValleyEnvironmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley1.23%
CryconiteEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite1.23%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.23%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.23%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.23%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.23%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.23%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.62%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.62%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.62%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.62%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.62%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.62%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.62%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.62%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.62%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459004Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)EnvironmentalOpen in IMG/M
3300002067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1Host-AssociatedOpen in IMG/M
3300002705Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMSHost-AssociatedOpen in IMG/M
3300002738Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSAHost-AssociatedOpen in IMG/M
3300002772Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMSHost-AssociatedOpen in IMG/M
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300003752Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2Host-AssociatedOpen in IMG/M
3300003761Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2Host-AssociatedOpen in IMG/M
3300003762Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2Host-AssociatedOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005513Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005519Combined assembly of arab plate scrape CL_Col (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005646Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_057 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005650Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009649Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059EnvironmentalOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300009662Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060EnvironmentalOpen in IMG/M
3300009686Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaGEnvironmentalOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300018414Freshwater sediment microbial communities in response to fracking from North America - Little Laurel Run_MetaG_LLRF_2013EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022561Borup_combined assemblyEnvironmentalOpen in IMG/M
3300022870Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L019-104C-5EnvironmentalOpen in IMG/M
3300022908Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5EnvironmentalOpen in IMG/M
3300025226Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025228Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025230Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025231Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025242Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025246Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes)Host-AssociatedOpen in IMG/M
3300025253Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025256Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028562Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3EnvironmentalOpen in IMG/M
3300028666Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaGHost-AssociatedOpen in IMG/M
3300028732Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4EnvironmentalOpen in IMG/M
3300028762Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3EnvironmentalOpen in IMG/M
3300028764Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_4EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028813Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3EnvironmentalOpen in IMG/M
3300028865Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4EnvironmentalOpen in IMG/M
3300029895Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-C3aEnvironmentalOpen in IMG/M
3300029896Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-C3bEnvironmentalOpen in IMG/M
3300029920Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3EnvironmentalOpen in IMG/M
3300029955II_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030519Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300030687Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1EnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300034130Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16EnvironmentalOpen in IMG/M
3300034170Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4B_036179402170459004Grass SoilVKGFLTRALAILAGVMLGMLIVSGSGPWRELFDRKPDPVPSAPIQRERAPDTRV
JGI24735J21928_1023818913300002067Corn RhizosphereMQRFLTRTLAILAGIVLGMLIVAGSGPWRELLRKSDSPASAPIQRERAPDTRV*
JGI25156J39149_1000360193300002705Arabidopsis RootMPGSVKRAVAIVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQREPAPDTRV*
JGI25156J39149_101199213300002705Arabidopsis RootMPRFLTRTLAILAGILLGMLVVAGSGPWRELLRKSDSPASAPIQRERAPDTRV*
JGI25156J39149_101668223300002705Arabidopsis RootMSRAPGFLVRTAAVLLGVVLGMAVVAGSSPWRELLKKPEPVPSAPIQRERAPDQRV*
JGI25154J39366_102024323300002738Arabidopsis RootVAIVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQREPAPDTRV*
JGI25164J39214_102074123300002772Arabidopsis RhizosphereGSFKRAVAVVAGVVLGMAIAAGTGPWRELFKPSQPVQPAPIQRERAPDLRV*
rootH1_1009419613300003323Sugarcane Root And Bulk SoilMPGSVKRAAAVVAGVVLGMAIAAGASPWRELFKRSEPVQPAPIQRERAPDTRV*
Ga0055539_100031723300003752Arabidopsis RootMPGPVKRAVAIMAGVVLGMVIAAGASPWRELFRKTEPVPPAPIQRERAPDTRV*
Ga0055539_101244723300003752Arabidopsis RootMRVAGLVKRSVAVLVGVMLGMLLVAGSGPWRELLKKADPPPEPAPIQRERAPDLRV*
Ga0055535_102110513300003761Arabidopsis RootMPGSVKRALAIVAGVVLGMAIAAGASPWRELFRRTEPVQPAPIQREPAPDTRV*
Ga0055542_103863613300003762Arabidopsis RootVLLGVVLGMAVVAGSSPWRELLKKPEPVPSAPIQRERAPDQRV*
Ga0066679_1056791013300005176SoilMPGSVKRAAAILAGVVLGMAIAAGASPWRELLRKTEPARPAPMPRERAPDTRV*
Ga0070658_1014451823300005327Corn RhizosphereVKRFLTRTLAVLAGIVLGMLIVSGAGPWRELFRKSDTATPPPIQRERAPDTRV*
Ga0070658_1046764823300005327Corn RhizosphereMRVAGLFKRSVAVLVGVMLGMLLVAGSGSWRELRSKPEAPKPAPIQRERAPDLRA*
Ga0070658_1062454523300005327Corn RhizosphereMSRFLTRTLAILAGIVLGMLVVAGSGPWRELFRKADSPASAPIQRERAPDTRV*
Ga0070658_1068639323300005327Corn RhizosphereMPGSIKRAVAIVAGVLLGMAIAAGTSPWRELFRKTEPVQPAPIQRERAPDTRV*
Ga0070690_10040063023300005330Switchgrass RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPAQPAPIQRERAPDTRA*
Ga0068868_10058697123300005338Miscanthus RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPAQPAPIQRERAPDTRV*
Ga0070674_10205616323300005356Miscanthus RhizosphereMPGSFKRAVAIVAGVVLGMLIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV*
Ga0070673_10010011923300005364Switchgrass RhizosphereVKGFLTRTLAILAGIVLGMLIVAGAAPWRELFRKSDTAPPAPIQRERAPDTRV*
Ga0070659_10080055723300005366Corn RhizosphereMRVAGLFKRSVAVLVGVMLGVLLVAGSGSWRELRSKPEAPKPAPIQRERAPDLRA*
Ga0070659_10140026313300005366Corn RhizosphereVKRAMAIVAGIVLGMVIAAGASPWRELFRKTEPAQPAPIQRERAPDTRV*
Ga0070663_10054311313300005455Corn RhizospherePGSVKRAMAIVAGIVLGMVIAAGASPWRELFRKTEPVQPAPIQREPAPDTRV*
Ga0070678_10177697823300005456Miscanthus RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV*
Ga0070662_10032208323300005457Corn RhizosphereMQRFLTRTLAILAGIVLGMLVVAGSGPWRELFRKADSPASAPIQRERAPDTRV*
Ga0068867_10040552423300005459Miscanthus RhizosphereMMPGPVKRAVAVLAGVVLGMVIAAGASPWRELLRKPEPAPSAPIQRERAPDTRV*
Ga0068867_10115936623300005459Miscanthus RhizosphereMPGSVKRAVAIVAGVVLGMLIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV*
Ga0070685_1015652023300005466Switchgrass RhizosphereVAGSVKRALAIVAGIVLGMAIAAGASPWRELFRKTGPAQPAPIQRERAPDTRV*
Ga0077120_110352523300005513Arabidopsis RhizosphereMAGSFKRAVAVVAGVVLGMAIAAGTGPWRELFKPSQPVQPAPIQRERAPDLRV*
Ga0077120_117001423300005513Arabidopsis RhizosphereVKGFLTRTLAILAGIVLGMLVVAGSGPWRELFRKSDSPASAPIQRERAPDTRV*
Ga0077119_1003040053300005519Arabidopsis RootMPGPVKRAVAILAGVVLGMAIAAGASPWRELLRKPEPVPSAPIQRERAPDTRV*
Ga0077119_1007931123300005519Arabidopsis RootMGKAPGFLVRTAAVLLGVVLGMAVVAGASPWRELLRKPEPASSAPIQRERAPDLRV*
Ga0077119_1024384223300005519Arabidopsis RootMRRFLTRTLAILAGIVLGMLIVAGSGPWRELFRKPEPVQPAPIPRERAPDTRV*
Ga0077119_1024880613300005519Arabidopsis RootKRFLTRTLAVLAGIVLGMLLVSGAGPWGELFRKPDTATPPPIQREGAPDTRV*
Ga0077119_1029570023300005519Arabidopsis RootMPASVKRAAAILAGVVLGMAIAAGASPWRELLRKTEPARPAPMPRERAPDTRV*
Ga0070679_10104583523300005530Corn RhizosphereVKGLVTRTLAVIAGVVLGMLLVAGSGPWRELFKRPDPAPATPIQRERAPDQRV*
Ga0068853_10043892923300005539Corn RhizosphereMPGSVKRAMAIVAGIVLGMVIAAGASPWRELFRKTEPAQPAPIQRERAPDTRV*
Ga0068855_10021971323300005563Corn RhizosphereMKRFLTRTLAVLAGIVLGMLLVSGAGPWRELFRKPDTATPPPIQRERAPDTRV*
Ga0068855_10044561023300005563Corn RhizosphereMPGSVKRAMAIVAGIVLGMVIAAGASPWRELFRKTAPVQPAPIQRERAPDTRA*
Ga0068855_10244599923300005563Corn RhizosphereMPGSVKRAMAIVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQREPAPDTRV*
Ga0070664_10136120523300005564Corn RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPVQPAPIQRERAPDTRV*
Ga0068857_10138634113300005577Corn RhizosphereVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV*
Ga0068852_10249950813300005616Corn RhizosphereMPGSVKRAMAIVAGIVLGMVIAAGASPWRELFRKTEPVQPAPIQRERAPDARV*
Ga0075040_188355623300005646Permafrost SoilVKGFLTRTLAILAGIVLGMLIVSGSGPWRELFNRKPDATPSAPIQRERAPDTRV*
Ga0075038_1137107723300005650Permafrost SoilMKGLFTRTLAVLAGIVLGMAIVAGASPWRQLFKKPDNTPAAPIQRERAPDQRV*
Ga0068863_10150725023300005841Switchgrass RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPVQPAPIQRERAPDTRA*
Ga0075370_1000501933300006353Populus EndosphereMPASVKRAAAILAGVALGMVIAAGASPWRELFRKTEPARPAPIQRERAPDTRV*
Ga0105240_1049221023300009093Corn RhizosphereMAGSFKRAVAVVAGVVLGMAIAAGTGPWRELFKPSQPVQPAPVQRERAPDLRV*
Ga0105245_1098372323300009098Miscanthus RhizosphereMPGSFKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPAQPAPIQRERAPDTRA*
Ga0105243_1147084823300009148Miscanthus RhizosphereMPGSVKRTVAIVAGVVLGMLIAAGASPWRELFRKTEPVQPAPIQRERAPDTRA*
Ga0116229_1028363423300009500Host-AssociatedLGMLVVAGAQPWRELFRKPDTAPPAPIQRERAPDTRV*
Ga0116229_1105584323300009500Host-AssociatedVKRLLTRTLAVVAGIVLGMLVVAGADPWRELFRKPDAAPSVPIQRERAPDTRA*
Ga0105855_124899823300009649Permafrost SoilVKGFLTRTLAILAGIVLGMLVVSGSGPWRELFKKSDTAAPAPIQRERAPDTRV*
Ga0105855_127329623300009649Permafrost SoilMAGFIKRAMAVLAGIVMGMLIVSGSGPWRELFKKPDNTPPAPIQRERAPDTRV*
Ga0105854_101477123300009660Permafrost SoilVKGSFKRAAAILAGVVLGIVIVAGASPWCELRKKPDNTPPAPIQRERAPDTRV*
Ga0105856_123889423300009662Permafrost SoilMAGFIKRAMAVLAGIVLGIVIVAGAGPWRERRPKPDATPQTPIQRERAPDTRV*
Ga0123338_1034708923300009686Glacier ValleyVKGVLTRTLAILAGIVLGMLIVSGSSPWRELFRKPEPVPSTPIQRERAPDQRV*
Ga0116227_1008935723300009709Host-AssociatedVKRLLTRTLAVVAGIVLGMLVVAGAQPWRELFRKPDTAPPAPIQRERAPDTRV*
Ga0116227_1028087323300009709Host-AssociatedMKAAGIVARTAAVLLGVVLGMALVAGASPWQQLLKKSEPVPATPIQREPAPDQRV*
Ga0116226_1006494633300009787Host-AssociatedVKRLLTRTLAVVAGIVLGMLVVSGADPWRELFRKPDTAPPVPIQRERAPDTRA*
Ga0126318_1029425813300010152SoilMPGSVKRAVAIVAGVVLGMVIAAGASPWRELFKRGEPVQPAPIQRERAPDTRV*
Ga0105239_1009023643300010375Corn RhizosphereRSRQIPSQLLAMSRFLTRTLAILAGIVLGMLVVAGSGPWRELFRKADSPASAPIQRERAPDTRV*
Ga0105239_1025286223300010375Corn RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQRERAPDTRA*
Ga0126361_1121595713300010876Boreal Forest SoilMKGFLTRMLAVLAGIVLGMLVVSGSGPWRELFKKPDNVPPAPIQRERAPDQRV*
Ga0126356_1040474423300010877Boreal Forest SoilVKGFFTRTLAVLAGIVLGMLIVSGPGPWRELFKKPDLAAPAPIPRERAPDTRV*
Ga0105246_1056803023300011119Miscanthus RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPAQPAPIQRERAPVTRA*
Ga0163162_1250960323300013306Switchgrass RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPAQPAPIQRERSPYTRA*
Ga0181534_1008339023300014168BogMSKAPGFLARTVAVLLGVVLGMAVVAGASPWRELLRKPEPAPSAPIQRERAPDLRVQAPETFPESRSST*
Ga0182008_1018868023300014497RhizosphereMMPGSVKRAAAILAGVVLGMLIAAGASPWRELLRKTEPARPAPIQRERAPDTRV*
Ga0157376_1200966423300014969Miscanthus RhizosphereMAGSFKRAVAVVAGVVLGMAIAAGTGPWRELFKPSEPVQPAPIQRERAPDLRA*
Ga0182007_1015362323300015262RhizosphereMRRFLTRTLAILAGIVLGMLIVAGSGPWRELIRKPEPVQPAPIQRERAPDTRV*
Ga0194135_1046506813300018414WatershedsAGIVLGIVIAAGASPWRELFKKPDDTPAAPIQRERAPDTRV
Ga0210408_1068347623300021178SoilMSKAPGFLVRAAAVLLGVVLGMAVVAGTSPWRELLKKPEPATTAPIQRERAPDLRV
Ga0210397_1025521023300021403SoilMKGFLTRTLAVLAGIVLGMLVVSGSGPWRELFKKPDTAPPAPIQRERAPDQRV
Ga0210389_1084792813300021404SoilMAGEQAMSGFLKRALAILAGVVLVMLVVSGAAPWRELFRKPDAAPTPPVQREPAPDTRV
Ga0210384_1000104463300021432SoilMSRAPGFLVRAAAVLLGVVLGMAVVAGTSPWRELLKKPEPATTAPIQRERAPDLRV
Ga0210392_1032373623300021475SoilMKGFLTRTLAVLAGIVLGMLVVSGSAPWRELFKKPDTAPPAPIQRERAPDQRV
Ga0210402_1142928223300021478SoilRTLAVLAGIVMGMLIVSGSGPWRELFKKPDTTPPAPIQRERAPDQRV
Ga0212090_1018578023300022561Glacier ValleyVKGVLTRTLAILAGIVLGMLIVSGSSPWRELFRKPEPVPSTPIQRERAPDQRV
Ga0247782_101053523300022870Plant LitterVKGLVTRTLAVIAGVVLGMLLVAGSGPWRELFKRPDPAPATPIQRERAPDQRV
Ga0247779_100313833300022908Plant LitterVKGFLKRAAAIVVGVVLGMVIVAGASPWRELFRKPDTAPAPPIQRERAPDTRV
Ga0209674_1000078313300025226Arabidopsis RootMPGPVKRAVAIMAGVVLGMVIAAGASPWRELFRKTEPVPPAPIQRERAPDTRV
Ga0209672_11211223300025228Arabidopsis RootMSRAPGFLVRTAAVLLGVVLGMAVVAGSSPWRELLKKPEPVPSAPIQRERAPDQRV
Ga0209563_11838523300025230Arabidopsis RootVKGFLTRTLAILAGIVLGMLVVAGSGPWRELFRKSDSPASAPIQRERAPDTRV
Ga0207427_10142493300025231Arabidopsis RhizosphereMAGSFKRAVAVVAGVVLGMAIAAGTGPWRELFKPSQPVQPAPIQRERAPDLRV
Ga0209258_100475123300025242Arabidopsis RootMPGSVKRALAIVAGVVLGMAIAAGASPWRELFRRTEPVQPAPIQREPAPDTRV
Ga0209646_10000531033300025246Arabidopsis RootMPGSVKRAVAIVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQREPAPDTRV
Ga0209677_10856523300025253Arabidopsis RootMRVAGLVKRSVAVLVGVMLGMLLVAGSGPWRELLKKADPPPEPAPIQRERAPDLRV
Ga0209759_100312423300025256Arabidopsis RootMPRFLTRTLAILAGILLGMLVVAGSGPWRELLRKSDSPASAPIQRERAPDTRV
Ga0209759_103594823300025256Arabidopsis RootMPGPVKRAVAILAGVVLGMAIAAGASPWRELLRKPEPVPSAPIQRERAPDTRV
Ga0207705_1004973623300025909Corn RhizosphereMSRFLTRTLAILAGIVLGMLVVAGSGPWRELFRKADSPASAPIQRERAPDTRV
Ga0207705_1065478323300025909Corn RhizosphereMPGSIKRAVAIVAGVLLGMAIAAGTSPWRELFRKTEPVQPAPIQRERAPDTRV
Ga0207705_1148334523300025909Corn RhizosphereMRVAGLVKRSVAVLVGVMLGMLLVAGSGPWRELLKKADPPPEPAPIQRERAPDLRA
Ga0207695_1002114943300025913Corn RhizosphereMPGSVKRAMAIVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQREPAPDTRV
Ga0207695_1056900323300025913Corn RhizosphereMAGSFKRAVAVVAGVVLGMAIAAGTGPWRELFKPSQPVQPAPVQRERAPDLRV
Ga0207671_1049730323300025914Corn RhizosphereVPASVKRALAVVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV
Ga0207649_1138004323300025920Corn RhizosphereMMPGPVKRAVAVLAGVVLGMVIAAGASPWRELLRKPEPAPSAPIQRERAPDTRV
Ga0207650_1183350623300025925Switchgrass RhizosphereMPGSVKRAMAIVAGIVLGMVIAAGASPWRELFRKTEPAQPAPIQRERAPDTRV
Ga0207687_1046806023300025927Miscanthus RhizosphereMPGSVKRAVAIVAGVVLGMLIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV
Ga0207690_1023274723300025932Corn RhizosphereMQRLLTRTLAILAGIALGMLIVAGSGPWRELLRKPDSPASAPIQRERAPDTRV
Ga0207690_1035661313300025932Corn RhizosphereMPGSFKRAVAIVAGVVLGMLIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV
Ga0207706_1174118713300025933Corn RhizosphereMQRFLTRTLAILAGIVLGMLVVAGSGPWRELFRKADSPASAPIQRERAP
Ga0207709_1060713113300025935Miscanthus RhizosphereMPGSVKRTVAIVAGVVLGMLIAAGASPWRELFRKTEPVQPAPIQRERAPDTRA
Ga0207667_1001661423300025949Corn RhizosphereMPGSVKRAMAIVAGIVLGMVIAAGASPWRELFRKTAPVQPAPIQRERAPDTRA
Ga0207667_1058104523300025949Corn RhizosphereMRVAGLFKRSVAVLVGVMLGMLLVAGSGSWRELRSKPEAPKPAPIQRERAPDLRA
Ga0207667_1081846823300025949Corn RhizosphereMKRFLTRTLAVLAGIVLGMLLVSGAGPWRELFRKPDTATPPPIQRERAPDTRV
Ga0207651_1001203543300025960Switchgrass RhizosphereVKGFLTRTLAILAGIVLGMLIVAGAAPWRELFRKSDTAPPAPIQRERAPDTRV
Ga0207712_1165496413300025961Switchgrass RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPAQPAPIQRERAP
Ga0207677_1138222113300026023Miscanthus RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPAQPAPIQRERAPDT
Ga0207678_1013922423300026067Corn RhizosphereMPGSVKRAMAIVAGIVLGMVIAAGASPWRELFRKTEPVQPAPIQREPAPDTRV
Ga0207674_1066722013300026116Corn RhizosphereVVLGMVIAAGASPWRELFRKTEPVQPAPIQREPAPDTRV
Ga0207674_1077276023300026116Corn RhizosphereMPGSVKRAVAIVAGVVLGMVIAAGASPWRELFRKTEPVQPAPIQRE
Ga0207674_1124222323300026116Corn RhizosphereVVLGMVIAAGASPWRELFRKTEPVQPAPIQRERAPDTRV
Ga0209523_105877223300027548Forest SoilMQRFLTRTLAILAGIVLGMLVVAGSGPWRELLRKSDSPASAPIQRERAPDTRV
Ga0268264_1190079023300028381Switchgrass RhizosphereKRAVAIVAGVVLGMVIAAGASPWRELLRKTEPAQPAPIQRERAPDTRA
Ga0302151_1000015153300028562BogMGKATGFVARTAAVLLGVVLGMAIVAGASPWRELLKKSEPVPATPIQRERAPDQRV
Ga0302151_1007154323300028562BogMAGFLKRALAVVAGVVLGIVIVAGAGPWRELLKKPDATPPPTIQRERAPDTRV
Ga0265336_100000121223300028666RhizosphereMSGFLKRAAAILAGVVLGMVIVAGAGPWRELLRKPEPVPTQPIQRERAPDTRV
Ga0302264_106672813300028732FenMTRTLAILAGVVLGMLIVSGAAPWRELLRKPDTAPVEPIQRERAPDLRV
Ga0302202_1027976023300028762BogMAGFIKRAMAVLAGVVLGIVIVAGAGPWRELLKKPDPAPSTPIQRERAPDTRV
Ga0302260_111440923300028764FenMPGFLKRTLAVLVGVVLGMAIVSGTSPWRELMKKPDDAPPAPIQREPAPDLRV
Ga0302279_10000406293300028783BogMSGFLRRAAAVVAGILLGMLIVAGMNPWRELFRKPGATPPAPIQRERAPDTRA
Ga0302157_1012611723300028813BogVKRFLTRALAVVAGIVLGMLVVSGADPWRELFRKPDTAPPAPIQRERAPDTRV
Ga0302291_1031265813300028865FenVKGLFTRTLAVLAGIVLGMLVVAGSGPWRELFKKSDPAPPAPIQRERAPDTRV
Ga0247043_103591823300029895CryconiteMAGFLKRALAVVAGVALGILIVAGAGPWRELFRQPDAAPTQPIQRERAPDTRA
Ga0247044_105209523300029896CryconiteVKGVLTRTLAILAGIVLGMLIVSGSSPWRELFRKPEPVPSAPIQRERAPDQRV
Ga0302142_118036823300029920BogTGFVARTAAVLLGVVLGMAIVAGASPWRELLKKSEPVPATPIQRERAPDQRV
Ga0311342_1009449543300029955BogGVVLGMAIVAGASPWRELLKKSEPVPATPIQRERAPDQRV
Ga0311336_1097096313300029990FenMTRTLSILAGVVLGMLIVSGAAPWRELLRKPDTAPVEPIQRERAPDLRV
Ga0311348_1047193123300030019FenVKGLLTRTLAVLAGIVLGMLVVAGSGPWRELFKKSDPAPPAPIQRQRAPDTRV
Ga0311333_1010460723300030114FenMTRTLAILAGVALGMLIVSGAGPWRQLFKSPANAAPAPIQRERAPDQRV
Ga0311333_1034422413300030114FenVVLGMLIVSGAAPWRELLRKPDTAPVEPIQRERAPDLRV
Ga0302193_1016582523300030519BogKARASADMGKATGFVARTAAVLLGVVLGMAIVAGASPWRELLKKSEPVPATPIQRERAPDQRV
Ga0311372_100003161163300030520PalsaMKGFLTRTLAVLAGIVLGMLVVAGSGPWRELFKKPDTAPPAPIQRERAPDQRV
Ga0311372_10009380113300030520PalsaMKGFLTRTLAVVAGIVLGMLVVSGSGPWRELFKKPDTAPPAPIQRERAPDQRV
Ga0311372_1018711023300030520PalsaMAGFLKRALAILAGVVLGIVIVAGASPWRELRKKPDATPPPTIQRERAPDTRV
Ga0311372_1304242123300030520PalsaMKGFLTRTLAVLAGIVLGMLVVSGSGPWRELFRKPDNTPPAPIQRERAPDQRV
Ga0307511_1009055023300030521EctomycorrhizaMMPGPVKRAVAILAGVVLGMVIAAGASPWRELLRKPEPASSAPIQRERAPDTRV
Ga0302309_1010111623300030687PalsaMKGFLTRTLAVLAGIVLGMLVVAGSDPWRELFNKPDTAPPAPIQRERAPDQRV
Ga0311345_1078186813300030688BogMAGFIKRAMAVLAGVVLGIVIVAGAGPWRELLKKPDPAPSTPIQRERAPDTR
Ga0302311_1098077023300030739PalsaFLTRTLAVVAGIVLGMLVVSGSGPWRELFKKPDTAPPAPIQRERAPDQRV
Ga0311366_1066878913300030943FenVKGLLTRTLAVLAGIVLGMLVVAGSGPWRELFKKSDPAPPAPIQRERAPDTRV
Ga0302323_10205858823300031232FenMRGFMTRTLAILAGVALGMLIVSGAGPWRQLFKSPANAAPAPIQRERAPDQRV
Ga0318516_1003772813300031543SoilMPGSFKRAAAVLAGVVLGMAVAAGPSPWRELLRKTAPVQPAPIQRERAPDTRV
Ga0307508_1088067323300031616EctomycorrhizaGVVLGMVVAAGASPWRELFRKTEPVQPAPIQRERAPDTRA
Ga0310813_1001899233300031716SoilMPGSVKRAMAIVAGIVLGMVIAAGASPWRELFRKTEPAPPAQIQRERAPDTRV
Ga0318500_1000424933300031724SoilMPGSVKRAAAVLAGVVLGMAVAAGPSPWRELLRKTAPVQPAPIQRERAPDTRV
Ga0302321_10364904023300031726FenKASRSAEMSKAPGFLARAVAVLLGVVLGMAAVAGASPWRELLKKSEPAPSAPIQRERAPDQRV
Ga0307516_10009769103300031730EctomycorrhizaMRVADFIKRTLAIVAGVVLGMLIVSGSGPWRELFIKKPDPTPPAPIQRERAPDTRV
Ga0307516_1039434623300031730EctomycorrhizaVKGFLTRTLAILAGIVLGMLIVSGSGPWRELFDKKPDPAPSAPIQREPAPDTRV
Ga0318512_1039450323300031846SoilMPGSVKRAVAVVAGVVLGMVIAAGASPWRELLRKDEPVQPAPIQRERAPDTRV
Ga0308174_1123401623300031939SoilMRPGPVKRAAAILAGVVLGMAIAAGAAPWRGLLRRTEPPASAPIPRERAPDTRV
Ga0308174_1160338423300031939SoilVKRLLTRTLAILAGIVLGMVIVAGSGPWRELFTKPDTTPPAPIQRERAPDTRV
Ga0308176_1267003823300031996SoilMPGSIKRAMAIVAGIVLGMVIAAGASPWRELFRKTAPVQPAPIQRERAPDTRA
Ga0318549_1001793233300032041SoilMPGSFKRAAAVLAGVVLGMAVAAGPSPWRELLRKTAPVQPAPI
Ga0308173_1001082633300032074SoilMRPGPVKRAAAILAGVVLGVAIAAGAAPWRGLLRRTEPPASAPIPRERAPDTRV
Ga0308173_1096443323300032074SoilMAGFLKRTLAVLAGIVLGMLVVAGAGPWRELLRKPDAASAPPTPVPRERAPDTRV
Ga0335083_1013737823300032954SoilMAAMGSLKRAAAILAGVVLGIVIAAGASPWRELFRKPDNAPPAPIQRERAPDTRV
Ga0370494_191095_340_5013300034130Untreated Peat SoilMKGLFTRTLAILAGIVMGMLIVSGSGPWRELFKKSDTAPPAPIQRERAPDQRA
Ga0370487_0161714_228_3953300034170Untreated Peat SoilMKAAGLLARTAAVLVGVVLGMAIVAGASPWRALMKKSDPAPATPIQRERAPDQRV
Ga0373959_0065649_195_3563300034820Rhizosphere SoilMPGSVKRAMAIVAGIVLGMVIAAGVSPWRELFRKTEPVQPAPIQRERAPDTRV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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