NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F040089

Metagenome / Metatranscriptome Family F040089

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F040089
Family Type Metagenome / Metatranscriptome
Number of Sequences 162
Average Sequence Length 99 residues
Representative Sequence PARKGRTAGLPVRPRDLSFARALRAVLSAIRLGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Number of Associated Samples 138
Number of Associated Scaffolds 162

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 2.47 %
% of genes near scaffold ends (potentially truncated) 93.83 %
% of genes from short scaffolds (< 2000 bps) 96.30 %
Associated GOLD sequencing projects 132
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (52.469 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(16.049 % of family members)
Environment Ontology (ENVO) Unclassified
(35.185 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.444 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.06%    β-sheet: 0.00%    Coil/Unstructured: 52.94%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 162 Family Scaffolds
PF11774Lsr2 1.23
PF00872Transposase_mut 1.23
PF05437AzlD 0.62
PF02653BPD_transp_2 0.62
PF04397LytTR 0.62
PF01527HTH_Tnp_1 0.62
PF00932LTD 0.62
PF13613HTH_Tnp_4 0.62
PF13551HTH_29 0.62
PF00144Beta-lactamase 0.62
PF04140ICMT 0.62
PF00005ABC_tran 0.62
PF00589Phage_integrase 0.62
PF07238PilZ 0.62
PF02371Transposase_20 0.62
PF01609DDE_Tnp_1 0.62
PF06445GyrI-like 0.62
PF00486Trans_reg_C 0.62
PF14104DUF4277 0.62
PF05977MFS_3 0.62
PF00078RVT_1 0.62
PF13592HTH_33 0.62
PF00583Acetyltransf_1 0.62
PF13408Zn_ribbon_recom 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 162 Family Scaffolds
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 1.23
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.62
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.62
COG2367Beta-lactamase class ADefense mechanisms [V] 0.62
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.62
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.62
COG3293TransposaseMobilome: prophages, transposons [X] 0.62
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.62
COG3547TransposaseMobilome: prophages, transposons [X] 0.62
COG5421TransposaseMobilome: prophages, transposons [X] 0.62
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.62
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.62


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.47 %
All OrganismsrootAll Organisms47.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_102022076Not Available762Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_102025126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium851Open in IMG/M
3300002568|C688J35102_118306866Not Available547Open in IMG/M
3300004091|Ga0062387_100793508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. DC12705Open in IMG/M
3300005162|Ga0066814_10066659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. DC12623Open in IMG/M
3300005435|Ga0070714_102511929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. DC12500Open in IMG/M
3300005437|Ga0070710_10702586Not Available714Open in IMG/M
3300005444|Ga0070694_100377508Not Available1105Open in IMG/M
3300005535|Ga0070684_102063039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii538Open in IMG/M
3300005537|Ga0070730_10614219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia693Open in IMG/M
3300005610|Ga0070763_10563690Not Available657Open in IMG/M
3300005921|Ga0070766_11092873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia550Open in IMG/M
3300006102|Ga0075015_100882123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium541Open in IMG/M
3300006573|Ga0074055_11521397Not Available606Open in IMG/M
3300006573|Ga0074055_11747371Not Available500Open in IMG/M
3300006573|Ga0074055_11750275Not Available580Open in IMG/M
3300006575|Ga0074053_12006500Not Available687Open in IMG/M
3300006580|Ga0074049_12470405Not Available507Open in IMG/M
3300006581|Ga0074048_12663154Not Available550Open in IMG/M
3300006603|Ga0074064_11551755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. DC12940Open in IMG/M
3300006604|Ga0074060_10017382Not Available1039Open in IMG/M
3300006605|Ga0074057_11960088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. DC12675Open in IMG/M
3300006605|Ga0074057_12326907Not Available802Open in IMG/M
3300006796|Ga0066665_10996984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia643Open in IMG/M
3300006797|Ga0066659_10904314Not Available737Open in IMG/M
3300006953|Ga0074063_10023530Not Available1078Open in IMG/M
3300006953|Ga0074063_13838897Not Available540Open in IMG/M
3300007258|Ga0099793_10502430Not Available603Open in IMG/M
3300009012|Ga0066710_103145922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia636Open in IMG/M
3300009029|Ga0066793_10827578Not Available526Open in IMG/M
3300009090|Ga0099827_10030607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3877Open in IMG/M
3300009090|Ga0099827_11068494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium701Open in IMG/M
3300009520|Ga0116214_1312762Not Available604Open in IMG/M
3300009523|Ga0116221_1171489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia942Open in IMG/M
3300009523|Ga0116221_1212811Not Available837Open in IMG/M
3300009524|Ga0116225_1259067Not Available780Open in IMG/M
3300009525|Ga0116220_10609811Not Available502Open in IMG/M
3300009628|Ga0116125_1169600Not Available611Open in IMG/M
3300009672|Ga0116215_1470799Not Available543Open in IMG/M
3300009700|Ga0116217_10804705Not Available579Open in IMG/M
3300009824|Ga0116219_10453536Not Available712Open in IMG/M
3300009839|Ga0116223_10402952All Organisms → cellular organisms → Bacteria → Terrabacteria group805Open in IMG/M
3300010322|Ga0134084_10224732Not Available667Open in IMG/M
3300010325|Ga0134064_10468553Not Available517Open in IMG/M
3300010379|Ga0136449_103771468Not Available571Open in IMG/M
3300010396|Ga0134126_13002733Not Available509Open in IMG/M
3300010876|Ga0126361_10416395All Organisms → cellular organisms → Bacteria2518Open in IMG/M
3300010880|Ga0126350_11027769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia869Open in IMG/M
3300011003|Ga0138514_100027645All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1058Open in IMG/M
3300011106|Ga0151489_1614874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia604Open in IMG/M
3300011107|Ga0151490_1837448Not Available506Open in IMG/M
3300011269|Ga0137392_10642694Not Available880Open in IMG/M
3300012055|Ga0153967_107015Not Available725Open in IMG/M
3300012199|Ga0137383_11165803Not Available555Open in IMG/M
3300012201|Ga0137365_10603067Not Available805Open in IMG/M
3300012201|Ga0137365_11096787Not Available573Open in IMG/M
3300012203|Ga0137399_11617697Not Available536Open in IMG/M
3300012207|Ga0137381_10503339All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300012207|Ga0137381_11468162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia574Open in IMG/M
3300012208|Ga0137376_11303939Not Available616Open in IMG/M
3300012209|Ga0137379_11143070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia685Open in IMG/M
3300012209|Ga0137379_11733952Not Available520Open in IMG/M
3300012211|Ga0137377_11489622Not Available603Open in IMG/M
3300012285|Ga0137370_10872791Not Available557Open in IMG/M
3300012356|Ga0137371_11434839Not Available505Open in IMG/M
3300012357|Ga0137384_11434936Not Available539Open in IMG/M
3300012359|Ga0137385_11409748All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012361|Ga0137360_10972325All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora732Open in IMG/M
3300012685|Ga0137397_11223027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia539Open in IMG/M
3300012917|Ga0137395_10876194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria650Open in IMG/M
3300012917|Ga0137395_11307243Not Available500Open in IMG/M
3300012925|Ga0137419_11272526Not Available618Open in IMG/M
3300012977|Ga0134087_10757145Not Available521Open in IMG/M
3300014164|Ga0181532_10566423Not Available619Open in IMG/M
3300014501|Ga0182024_12445493Not Available565Open in IMG/M
3300015241|Ga0137418_11074235Not Available575Open in IMG/M
3300015359|Ga0134085_10483497Not Available564Open in IMG/M
3300015372|Ga0132256_102423562Not Available627Open in IMG/M
3300016294|Ga0182041_10279937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1373Open in IMG/M
3300016319|Ga0182033_11652010Not Available580Open in IMG/M
3300016422|Ga0182039_11781398Not Available564Open in IMG/M
3300016445|Ga0182038_11362209Not Available635Open in IMG/M
3300017821|Ga0187812_1245708Not Available570Open in IMG/M
3300017822|Ga0187802_10449400Not Available511Open in IMG/M
3300017926|Ga0187807_1219891Not Available618Open in IMG/M
3300017928|Ga0187806_1247745Not Available616Open in IMG/M
3300017932|Ga0187814_10054665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1469Open in IMG/M
3300017932|Ga0187814_10332854Not Available584Open in IMG/M
3300017932|Ga0187814_10421552Not Available521Open in IMG/M
3300017936|Ga0187821_10401868Not Available561Open in IMG/M
3300017942|Ga0187808_10549614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora soli537Open in IMG/M
3300017948|Ga0187847_10281614Not Available908Open in IMG/M
3300017970|Ga0187783_10731376Not Available714Open in IMG/M
3300017975|Ga0187782_11050446Not Available635Open in IMG/M
3300017995|Ga0187816_10510692Not Available542Open in IMG/M
3300018012|Ga0187810_10392873Not Available582Open in IMG/M
3300018034|Ga0187863_10224833Not Available1044Open in IMG/M
3300018037|Ga0187883_10631655Not Available557Open in IMG/M
3300018040|Ga0187862_10902679Not Available505Open in IMG/M
3300018043|Ga0187887_10654865Not Available620Open in IMG/M
3300018044|Ga0187890_10311360Not Available884Open in IMG/M
3300018064|Ga0187773_10104480All Organisms → cellular organisms → Bacteria1401Open in IMG/M
3300018468|Ga0066662_11880199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales626Open in IMG/M
3300018482|Ga0066669_11213565Not Available681Open in IMG/M
3300021384|Ga0213876_10571774Not Available601Open in IMG/M
3300021860|Ga0213851_1891908All Organisms → cellular organisms → Bacteria → Terrabacteria group629Open in IMG/M
3300022521|Ga0224541_1018865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia742Open in IMG/M
3300024288|Ga0179589_10358372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli663Open in IMG/M
3300025898|Ga0207692_10908736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria579Open in IMG/M
3300026724|Ga0208842_101882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli538Open in IMG/M
3300027560|Ga0207981_1097835Not Available541Open in IMG/M
3300027570|Ga0208043_1182995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli535Open in IMG/M
3300027625|Ga0208044_1174735Not Available585Open in IMG/M
3300027641|Ga0208827_1140294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli680Open in IMG/M
3300027652|Ga0209007_1070658All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300027696|Ga0208696_1224212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria590Open in IMG/M
3300027698|Ga0209446_1191285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli527Open in IMG/M
3300027703|Ga0207862_1074575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia1020Open in IMG/M
3300027768|Ga0209772_10253516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli558Open in IMG/M
3300027846|Ga0209180_10340545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria856Open in IMG/M
3300027854|Ga0209517_10079646All Organisms → cellular organisms → Bacteria2283Open in IMG/M
3300027905|Ga0209415_10711123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria718Open in IMG/M
3300028776|Ga0302303_10310431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli530Open in IMG/M
3300028789|Ga0302232_10315277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia772Open in IMG/M
3300030042|Ga0302300_1205236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli550Open in IMG/M
3300030053|Ga0302177_10639673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli541Open in IMG/M
3300030054|Ga0302182_10462259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli528Open in IMG/M
3300030058|Ga0302179_10124105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium1140Open in IMG/M
3300030520|Ga0311372_11105629Not Available1029Open in IMG/M
3300030520|Ga0311372_12494276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli581Open in IMG/M
3300030531|Ga0210274_1239772Not Available519Open in IMG/M
3300030740|Ga0265460_12588096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli542Open in IMG/M
3300030906|Ga0302314_10768316Not Available970Open in IMG/M
3300031057|Ga0170834_106629714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium1225Open in IMG/M
3300031090|Ga0265760_10360392All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300031231|Ga0170824_113498695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria570Open in IMG/M
3300031231|Ga0170824_116748173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli524Open in IMG/M
3300031234|Ga0302325_11444280All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300031234|Ga0302325_12122061Not Available687Open in IMG/M
3300031234|Ga0302325_12939812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli553Open in IMG/M
3300031234|Ga0302325_13222427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli520Open in IMG/M
3300031469|Ga0170819_17537107Not Available603Open in IMG/M
3300031708|Ga0310686_106653959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Naasia → Naasia lichenicola2575Open in IMG/M
3300031708|Ga0310686_115662013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia908Open in IMG/M
3300031798|Ga0318523_10681490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli505Open in IMG/M
3300031941|Ga0310912_10714326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria776Open in IMG/M
3300032160|Ga0311301_10267502All Organisms → cellular organisms → Bacteria2789Open in IMG/M
3300032160|Ga0311301_10617170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1556Open in IMG/M
3300032770|Ga0335085_11237287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia791Open in IMG/M
3300032805|Ga0335078_11430301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli778Open in IMG/M
3300032805|Ga0335078_11558184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia734Open in IMG/M
3300032828|Ga0335080_12230685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli525Open in IMG/M
3300032892|Ga0335081_11172507Not Available878Open in IMG/M
3300032892|Ga0335081_11615115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia711Open in IMG/M
3300032892|Ga0335081_11780881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli667Open in IMG/M
3300032895|Ga0335074_10008548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria14231Open in IMG/M
3300032954|Ga0335083_10483816Not Available1039Open in IMG/M
3300032955|Ga0335076_11371588Not Available592Open in IMG/M
3300033134|Ga0335073_11099475Not Available810Open in IMG/M
3300033158|Ga0335077_10845587Not Available927Open in IMG/M
3300033158|Ga0335077_12211976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli505Open in IMG/M
3300034090|Ga0326723_0235815All Organisms → cellular organisms → Bacteria814Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil16.05%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil11.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.88%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil8.02%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa8.02%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment6.79%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.47%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.47%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.85%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.85%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.23%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.62%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.62%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.62%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.62%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.62%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.62%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.62%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.62%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.62%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.62%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.62%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.62%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.62%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.62%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.62%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.62%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.62%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.62%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012055Attine ant fungus gardens microbial communities from Florida, USA - TSFL051 MetaGHost-AssociatedOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022521Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026724Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN410 (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027570Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028776Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300030042Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030054Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030531Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10202207613300000364SoilVLDAALAAVPAGKGRRAGLPVRPRDLSFARAVRAVLSAXRLGHDCYXAVTSEIGQYRNTLDRDRHRARKSKSPSSFAHAGPAGTVTRIAPAVITMANTPA*
INPhiseqgaiiFebDRAFT_10202512623300000364SoilARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
C688J35102_11830686623300002568SoilAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSPFPHANAKDTATRIAPAVVTVANTPA*
Ga0062387_10079350813300004091Bog Forest SoilPMLRSGSPDLVRQEIAAWAAGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0066814_1006665913300005162SoilGPMLRSGSPDLVRQEIAAWAAGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0070714_10251192913300005435Agricultural SoilTGLARGVVLDAALAAVPAGKGRRAGLPVRTRDLSFARAVRAVLSAIRLGHDCYQAVTSEIGKHRNIVDRDRHRPRKSKSPSCFAHATARDTATRIAPAVITMANAPA*
Ga0070710_1070258623300005437Corn, Switchgrass And Miscanthus RhizosphereLRSGSPDLVRQELAAWAAGVGMTRGVVLDAALAAAPVRKGRTAGLPVRPRDLSFARALRAVLSAIRTGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATPKDTATRIAPAIITMANTPA*
Ga0070694_10037750813300005444Corn, Switchgrass And Miscanthus RhizosphereRGVVLDAARAAVPAGKGRRAGLEVRPRDLSFARALRAILSAIRLGRDCYQAVTSEIAGYRNTVDRDRHRARKSKSPSSFAHAGPADTITRIAPAVITMANTPA*
Ga0070684_10206303913300005535Corn RhizosphereRGVVLDSALAAAPAAKGRRAALTVRPRDLSFARAVRAALSAIRLGHSCYQAVTSKIGRHRNVVDRDRHRARTSKSPSPFAHAGPADTVTRIAPAVITMANSPA*
Ga0070730_1061421923300005537Surface SoilELVRQELAAWAAGTAMTRGVVLAAARAARPAGKGRRAGLEVRPRDLSFGRALRAVLSAIRLGHDRYQAVTREIAGFRNVVDRDRHRARKSKSPSAFPHATPKDTATRTAPAVITMANTPA
Ga0070763_1056369013300005610SoilALAAAPAGKGRRAGLAVRARDLSFARAVRAVLSAIRLGNACYQAVTSEIAKYRNVVDRDRHRARKSKSPSSFAHAGAKDTVTRIAPAIITMANTLA*
Ga0070766_1109287313300005921SoilPRDLSFARALRAVLSAIRLGHDRFQAVTSEIGRYRNVVDRDRHRARKSKSPSSFAHATPKDTATRIAPAIITMASTPA*
Ga0075015_10088212313300006102WatershedsRELLPHEIRPRDLSLARAIRAVIAAIRSGRACYDAVAREIAGRRVTVDRDRHRARKSKSPSGFGHATAKDTVTRIAPAIITIANTPA*
Ga0074055_1152139713300006573SoilDGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSPFPHANAKDTATRIAPAVVTMANTPA*
Ga0074055_1174737113300006573SoilGRRAGLAVRPRNLSCARAVRAVLTAIRLGHDCYQAVTSEIGKHRNIVDRDRHRPRKSKSPSCFAHATARDTATRIAPAVITMANAPA*
Ga0074055_1175027513300006573SoilLDAALAAAPGRKGKTAGLPVRPRDLSFARALRAALSAIRIGNTCYQTVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0074053_1200650013300006575SoilWAAGVGMTRGVVLDAALAAAPVRKGRTAGLPVRPRDLSFARALRAVLSAIRIRNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0074049_1247040523300006580SoilLAAVPARKGRRAGLPVRPRDLSFARAVRAVLSAIRLGHDCYKAVTSEIGQYRNTLDRDRHRARKSKSPSSFAHAGPAGTVTRIAPAVITMANTPA*
Ga0074048_1266315413300006581SoilRAVVLDAALAAAPVRKGRTAGLPVRPRDLSFARALRAALSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0074064_1155175523300006603SoilQELAAWAAATGLTRGVVLDAALAAVPAGKGRRAGLPVRPRDLSFARAVRAVLSAIRLGHDCYKAVTSEIGQYRNTLDRDRHRARKSKSPSSFAHAGPAGTVTRIAPAVITMANTPA*
Ga0074060_1001738213300006604SoilAAPGRKGKTAGLPVRPRDLSFARALRAALSAIRIGNTCYQTVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0074057_1196008813300006605SoilRQEIAAWAAGTAMTRGVILNAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSPFPHANAKDTATRIAPAVVTMANTPA*
Ga0074057_1232690723300006605SoilDLVRQELAAWAAGVGMTRGVVLDAALAAAPVRKGRTAGLPVRPRDLSFARALRAALSAIRIGNTCYQTVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Ga0066665_1099698413300006796SoilARKGRTPGPPVRPRDLSSARALRAVLSAIRLGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0066659_1090431413300006797SoilPARKGRTAGLPVRPRDLSFARALRAVLSAIRLGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0074063_1002353023300006953SoilMLRSGSPDLVRQELAAWAAGVGMTRGVVLDAALAAAPVRKGRTAGLPVRPRDLSFARALRAALSAIRIGNTCYQTVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0074063_1383889713300006953SoilLTVRPRDLSFARGLRAVLSAIRLGRACYQAVTSEIAGYRNAVDRDRHRARKSKSPSPFPHANAKDTATRIAPAVVTMANTPA*
Ga0099793_1050243013300007258Vadose Zone SoilVGMTRGVVLDAALAAAPARKGRTAGLPVRPRDLSFARALRAVVSAIRLGNTCYQAVTSEIGKYRNLVGRDRHRARKSKSPSSFAHATAKDTATRIVPAIVTMANSPA*
Ga0066710_10314592213300009012Grasslands SoilRKGRRAGLPVRTRDLSFARAVRAVLSAIRLGNSCYQAVTSEIAEYRNVVDRDRHRARKSRSPSSFAHAGAKDTATRIAPAIITMANTPA
Ga0066793_1082757813300009029Prmafrost SoilLDAALAAAPARKGRTAGLPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSTSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0099827_1003060763300009090Vadose Zone SoilGLTRGVVRDAALAAVPAGKGRRAGLAVRPRDLSHARAVRAVLSAIRLGHDCYQAVTSEIGRYRNTVDRDRHRARKSKSPSSFAHATAKDTVTRIAPAVITMANTPA*
Ga0099827_1106849423300009090Vadose Zone SoilVLDAALAAVPARKGRRAGLTVRPRDLSHARAVRAVLSAIRLGHACYQAVTSEIAEYRNAVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA*
Ga0116214_131276213300009520Peatlands SoilMTRGLILDAGVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0116221_117148923300009523Peatlands SoilVRQELAAWAAGVGMTRGVVLDAALAAAPVRKGRTAGLPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0116221_121281113300009523Peatlands SoilILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0116225_125906713300009524Peatlands SoilSGSPDLVRQEIAAWAAGTGMTRGVVLDAALAAVPAGKGRRAGLAVRPRDLSFARALRAVLSAIRLGRDCYQAVTSEIAGYRNVVDRDRHRARKSKSPSHFPHASAKDTATRIAPAVITMANTPA*
Ga0116220_1060981113300009525Peatlands SoilGLTVRPRDLSFARGLRAVLSAIRLGNDCYQAVTSEIAKCRNVVDRDRHRARKSKSPSSFAHAGAKDTATRIAPAIITMANTPA*
Ga0116125_116960013300009628PeatlandRCAARAAVPARKGRHAGQPVRSRDLSLTRARRLILAGIRSGYAGYQALTREIGRFRNACDRDRHRARKSKSPSTFPHARLKDTVTRIAPAVITLANTPA*
Ga0116215_147079913300009672Peatlands SoilSPDLVRQELAAWAAGVGMTRGVVLDAALAAAPVRKGKTAGLLVRPRDLSFARALRAALSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0116217_1080470513300009700Peatlands SoilKGRRAGLAVRPRDLSQARAVRAVLAAIRLGRHCYHAVTSEIAGYRNVVDRGRHRPRKSKSPSSFAHATAEDTVTRIATAVITMANTPA*
Ga0116219_1045353613300009824Peatlands SoilGLTRGVVLDAALAAVPARKGRRAGLTVRPRDLSHARAVRAVLSAIRLGHDCYQAVTSEIAKYRTVVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA*
Ga0116223_1040295213300009839Peatlands SoilLVRQEIAAWAAGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0134084_1022473223300010322Grasslands SoilAALAAAPARKGRTAGLPVRPRDLSFARALRAVVSAIRIGNTCYQAVTSEIAEYRNAVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA*
Ga0134064_1046855313300010325Grasslands SoilAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRACYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0136449_10377146813300010379Peatlands SoilDAALAAAPARKGRRAGLAVRPRDLSCARAVRAVLTAIRLGRDCYQAVTSEIGKHRNIVDRDRHRPRKSKSPSCFAHATARDTATRIAPAVITMANAPA*
Ga0134126_1300273313300010396Terrestrial SoilVRPRDLSFARALRAILSAIRLGRDCYQAVTSEIAGYRNTVDRDRHRARKSKSPSHFPHASAEDTVTRIAPAVITMANTPA*
Ga0126361_1041639543300010876Boreal Forest SoilMLRSGSPGLVRQELAAWAAGVGMTRGVVLDAALAAAPVRKGRTAGLPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0126350_1102776913300010880Boreal Forest SoilLDAALAAVPARTGRRGRLEVRPRDLSFTHAVRAVLSAIRLGYACYQAVTSEIAEYRNVAARNRHRARKSKSPSSFAHAGPADTATRIAPAVITMANTPA*
Ga0138514_10002764523300011003SoilGRRAGLPVRPRDLSFARAVRAVLSAIRLGHDCYKAVTSEIGQYRNTLDRDRHRARKSKSPSSFAHAGPAGTVTRIAPAVITMANTPA*
Ga0151489_161487413300011106SoilAGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRACYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0151490_183744813300011107SoilAVRPRDLSCARAVQAVLTAIRLGHDCYQAVTSEIGKHRNIVDRGRHRPRKSKSPSCFAHATARDTATRIAPAVITMANAPA*
Ga0137392_1064269413300011269Vadose Zone SoilELAAWAAVTGLTRGVVRDAALAAVPAGKGRRAGLAVRPRDLSHARAVRAVLSAIRLGHDCYQAVTSEIAKYRTVVDRDRHRARKSKSPSPFAHAGPAGTVTRIAPAIITMANTPA*
Ga0153967_10701523300012055Attine Ant Fungus GardensPELVRQELAAWAAGTAMTRAVILAAARTAEPSRKGRRAGLEVRPRDLSFARALRAVLAAIRLGYDRFQAVTREISGFRNVVDRDRHRARKSKSPSSFPHATPKDTATRIAPAVITMANTPA*
Ga0137383_1116580313300012199Vadose Zone SoilTGMTRGVLLDAARAAVPARKGRRAALTVRPRDLSFARALRAVLSAIRLGHGCCQAVTSEIAGYRNTVDRDRHRARKSKSPSHFPHASAKDTVPRIAPAVITMANTPA*
Ga0137365_1060306723300012201Vadose Zone SoilGLPVRPRDLSFARALRAVVSAIRLGNSCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIVPAIVTMANSPA*
Ga0137365_1109678723300012201Vadose Zone SoilAAATGLTRGVVLDAALAAVPARKGRRTGLTVRPRDLSHARAVRAVLSAIRLGHACYQAVTSEIAKYRTVVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA*
Ga0137399_1161769713300012203Vadose Zone SoilCSPDLVRQELAAWAAGTGMTRGVILDAARAAVPARKGRRAALTVRPRDLSFARALRAALSAIRLGHGCRQAVTSEIARYRNTVDRDRHRARKSKSPSHFPHASAKDAVTRIAPAIITMANTPA*
Ga0137381_1050333933300012207Vadose Zone SoilRTRDLSFARAVRAVLSAIRLGNSCYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGAKDTATRIAPAVITIANTPA*
Ga0137381_1146816213300012207Vadose Zone SoilRKGRTAGLPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIVPAIVTMANSPA*
Ga0137376_1130393923300012208Vadose Zone SoilVNAAYIGIFSAGQHPVRTRDLSFARAVRAALSAIRLGNSCYQAVTSEIAEYRNAVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA*
Ga0137379_1114307013300012209Vadose Zone SoilRRAALTVRPRDLSFARALRAALSAIRLGNACRQAVTSEIARYRNTVDRGRHRARKSKSPSHFPHATAKDTATRIAPAIITMANTPA*
Ga0137379_1173395213300012209Vadose Zone SoilLDAARAAVPAGKGRRAGLAVRPRDLSFARALRAVLSAIRLGHGCYQAVTSEIAGYRNVVDRDRHRARKSKSPSPFPHASTKDTITRIAPAVITMANTPA*
Ga0137377_1148962223300012211Vadose Zone SoilLDAARAAVPARKGRRAALTVRPRDLSFARALRAALSAIRLGNACRQAVTSEIARYRNTVDRGRHRARKSKSPSHFPHATAKDTATRIAPAIITMANTPA*
Ga0137370_1087279113300012285Vadose Zone SoilTRGVVLDAALAAVPARKGRRAGLTVRPRDLSHARAVRAVLSAIRLGHACYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGAKDTATRIAPAVITIANTPA*
Ga0137371_1143483913300012356Vadose Zone SoilDAALAAVPARKGRRAGLAVRPRDLSCARALRAVLSAIRLGHDCYQAATSEFGRYRNTVDRDRHRARKSKSPSSFAHATAKDTVTRIAPAVITMANTPA*
Ga0137384_1143493613300012357Vadose Zone SoilAAPARKGRRAGLAVRPRDLSFARAVRAALSAIRLGHASYQAVTSEIAGYRNIIDRDRHRARKSKSPSSFAHAGAKDTVTRIAPAVITMANTPA*
Ga0137385_1140974813300012359Vadose Zone SoilRKGRTAGLPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVAGRDRHRARKSKSPSSFAHATPKDTATRIAPAIITMANTPA*
Ga0137360_1097232523300012361Vadose Zone SoilRRTGLTVRPRDLSHARAVRAVLSAIRLGHACYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGAKDTVTRIAPAVITMANTPA*
Ga0137397_1122302713300012685Vadose Zone SoilVRPRDLSFARAVRAVLSAIRLGNSCYQAVTSEIAEYRNTVDRDRHRARKSKSPSSFAHAGAKDTATRIAPAIITMANTPA*
Ga0137395_1087619413300012917Vadose Zone SoilAAWTAATGLTRGVVLDAALAAVPARKGRRTGLTVRPRDLSHARAVRAVLSAIRLGHDCYQAVTSEIAKYRTVVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA*
Ga0137395_1130724313300012917Vadose Zone SoilPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSRSPSSFAHATAQDTATRIVPAIVTMANSPASPAGIP*
Ga0137419_1127252613300012925Vadose Zone SoilRKGRTAGLPVRPRDLSFARALRAVVSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSLSSFAHATAKDTATRIVPAIVTMANSPA*
Ga0134087_1075714513300012977Grasslands SoilTGLTRGVVLDAALAAVPASKGRRTGLTVRPRDLSHARAVRAVLSAIRLGHDCYQAVTSEIAKYRTVVDRDRHRARKSKSPSHFPHASAKDTVTRIAPAIITMANTPA*
Ga0181532_1056642323300014164BogGSPDLVRQELAAWAAGTGMTRGVVLDAALAAAPVRKGRTAGQPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0182024_1244549313300014501PermafrostMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0137418_1107423513300015241Vadose Zone SoilRDLSFARALRAALSAIRLGNACRQAVTSEIARYRNTVDRGRHRARKSKSPSHFPHATAKDTATRIAPAIITMANTPA*
Ga0134085_1048349713300015359Grasslands SoilAVPARKGRRAALTVRPRDLSFARALRAVLSAIRPGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA*
Ga0132256_10242356213300015372Arabidopsis RhizosphereADAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA*
Ga0182041_1027993723300016294SoilLTIRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAIVTMANTPA
Ga0182033_1165201013300016319SoilPARKGRRAGLAVRPRDLSCARAVRAVLAAICLGRDCYQAVTSEIGKHRNIVDRDRHRPRKSKSPSSFAHATARDTATRIAPAVITMANAPA
Ga0182039_1178139813300016422SoilMLRSGSPDLVRQEIAAWAAGTAMTRGVLLDAAVAAVPARKGRRAGLTIRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAIVTMANTPA
Ga0182038_1136220913300016445SoilGLPVRPRDLSFARALRAVLSAIRLRSACYQAVTREIGRHRNTLDRDRHRARKSKSPSSFAHAGVKDTATRIAPAVITMANTPA
Ga0187812_124570813300017821Freshwater SedimentAGPMLRSGSPDLVRQELAAWAAATGLTRGVVLDAALAAVPARKGRRAGLTIRPRDLSHARAVRAVLSAIRLGHDCYQAVTSEIAKYRTVVDRDRHRARKSKSPSPFAHAGPAETVTRIAPAIITMANTPA
Ga0187802_1044940013300017822Freshwater SedimentVNPRSCAAAAAIPARKGRRAGLTVRPRDLSFARALRAVLSAIRLGHDCYQAVTSGIAGYRNVTGRGRHRARKSKSPSPFPHASVKDTVTRTAPAVITMANTPA
Ga0187807_121989113300017926Freshwater SedimentPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVIGRDRHRARKSKSPSSFAHATPKDTATRIAPAIITMASTPA
Ga0187806_124774513300017928Freshwater SedimentLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Ga0187814_1005466523300017932Freshwater SedimentRSGSPDLVRQELAAWAAATGLTRGVTRDAALAAAPSRKGRRAGLTVRPRDLSFARAVRAVLSAIRLGHDCYQAVTSEIAKYRNVVDRDRHRARKSKSPSSFAHAGAKDTVTRIAPAVITMANTPA
Ga0187814_1033285413300017932Freshwater SedimentLDAALAAVPAGKGRRAGLPVRPRDLSFARAVRAVLSAIRLGHDCYQAVTSEIGQYRNTLDRDRHRARKSKSPSSFAHAGPAGTVTRIAPAVITMANTPA
Ga0187814_1042155223300017932Freshwater SedimentGRRAGLAVRPRDLSCARAVRAVLTAIRLGHDCYQAVTSEIGKHRNIVDRDRHRPRKSKSPSCFAHATARDTATRIAPAAITMANAPA
Ga0187821_1040186813300017936Freshwater SedimentARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Ga0187808_1054961423300017942Freshwater SedimentAGLPARPRDLSQARAVRAVLSAIRLGRHCYQAVTSEIGEYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Ga0187847_1028161423300017948PeatlandGSPELVRQELAAWAAGTAMTRGVVLAAARAASPAGKGRRAGLEVRPRDLSFGRALRAVLSAIRLGHDRFQAVTREIAGFRNVVDRDRHRARKSKSPSAFPHATPKDTATRTAPAVITMANTPS
Ga0187783_1073137613300017970Tropical PeatlandVILDAALAAVPARNGRRAGLTVRPRDLSFARAVRAVLSAIRLGHDCYQAVTREIGQYRNTLDRDRHRARKSKSPSSFAHAGPADSVTRIAPAVITMANVPA
Ga0187782_1105044613300017975Tropical PeatlandELAAWAAATGLTRGVILDAALAAVPARNGRRAGLTVRPRDLSFARAVRAVLSAIRLGHDCYQAVTREIGQYRNTLDRDRHRARKSKSPSSFAHAGPADSVTRIAPAVITMANVPA
Ga0187816_1051069223300017995Freshwater SedimentTRDLSFARAVHAVLSAIRLGNSRYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGPAGTVTRIAPAVITMANTPA
Ga0187810_1039287313300018012Freshwater SedimentGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA
Ga0187863_1022483313300018034PeatlandVRQEIAAWAAGTAMTRGIILDAAVAAIPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA
Ga0187883_1063165513300018037PeatlandALAAAPARKGKRAGLPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Ga0187862_1090267913300018040PeatlandPVRKGRTAGLPVRPRDLSFARALRAVLSAIRIGNTCYQTVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAVVTMANTPA
Ga0187887_1065486513300018043PeatlandRQELAAWAAGTAMTRGVVLAAARAASPAGKGRRAGLEVRPRDLSFGRALRAVLSAIRLGHDRFQAVTREIAGFRNVVDRDRHRARKSKSPSAFPHATPKDTATRTAPAVITMANTPS
Ga0187890_1031136013300018044PeatlandGRRAGLAIRPRDLSLARAIRAVIAAIRSGRACYDAVAREIAGRRVTVDRDRHRARKSKSPSGFGHATAKDTVTRIATAIITMANTPA
Ga0187773_1010448023300018064Tropical PeatlandAGQPVRPRDLSHARARRAILAAIRSGRTGYKSLTSQIAKYRTITDRDRHRARKSKSPSTFPHAGVKDTVTRIAPAVITMANTPA
Ga0066662_1188019913300018468Grasslands SoilARALRAVLSAIRLGNTCYQAVTSEIGKYRNVVGRDRHRARKSRSPSSFAHATAKDTATRIAPAIVTMANSPA
Ga0066669_1121356523300018482Grasslands SoilAVATGLTRGVVLDAALAAVPARKGRRAGLTVRPRDLSHARAVRAVLSAIRLGHACYQAVTSEIAEYRNAVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA
Ga0213876_1057177413300021384Plant RootsHRAGAHVRPRDLSFARTLQAVLSAIRLGHDRFHTLTREISGFRNVVDRDRHRARKSKSPSSFPHATQADTITRIAPAVITMANTPA
Ga0213851_189190813300021860WatershedsAAVEMTRGVTRDAALAATPAGKGRRAGLAIRPRDLSLARAIRAVIAAIRSGRACYDAVTREIAGRRVTVDRDRHRARKSKSPSGFGHATAKDTVTRIAPAIITMANTPA
Ga0224541_101886523300022521SoilLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA
Ga0179589_1035837213300024288Vadose Zone SoilVNAAYIGIFSAGQHPVRTRDLSFARAVRAALSAIRLGNSCYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGAKDTATRIAPAIITIANTPA
Ga0207692_1090873613300025898Corn, Switchgrass And Miscanthus RhizosphereAPVRKGRTAGLPVRPRDLSFARALRAVLSAIRTGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATPKDTATRIAPAIITMANTPA
Ga0208842_10188213300026724SoilRRAGLAVRPRDLSCARAIRAVLTAIRLGHDGYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Ga0207981_109783523300027560SoilWAAATGLTRGVVLDAALAAVPARKGRRAGLTVRPRDLSHARAVRAVLSAIRLGNSCYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGPAGTVTRIAPAVITMANTPA
Ga0208043_118299513300027570Peatlands SoilGAPDLVRQELAAWAAATGLTRSVVLDAALAAVPARKGRRAGLTIRPRDLSHARAVRAVLSAIRLGHDCYQAVTSEIAKYRTVVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA
Ga0208044_117473513300027625Peatlands SoilVVLDAALAAVPAGKGRRAGLAVRPRDLSFARALRAVLSAIRLGRDCYQAVTSEIAGYRNVVDRDRHRARKSKSPSHFPHASAKDTATRIAPAVITMANTPA
Ga0208827_114029413300027641Peatlands SoilMLRSGSPDLVRQELAAWAAATGLTRGVVLDAALAAVPAGKGRRAGLPVRPRDLSFARAVRAVLSAIRLGHDCYQAVTSEIAKYRTVVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANKPT
Ga0209007_107065813300027652Forest SoilMKAFLPIVIVVAALAAVPARTGRRTGLTVRPRDLSHARAVRAVLSAIRLGHDCYQAVTSEIAKYRAVVDRDRHRARKSKSPSPFAHAGPADTVTRIAPAIITMANTPA
Ga0208696_122421223300027696Peatlands SoilAAAPARKGRRAGLAVRPRDLSCARAVRAVLTAIRLGHDCYQAVTSEIGKHRNIVDRDRHRPRKSKSPSSFAHATARDTATRIAPAVITMANAPA
Ga0209446_119128513300027698Bog Forest SoilRSGSPDLVRQEIAAWAAGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAIITMANTPA
Ga0207862_107457523300027703Tropical Forest SoilRDAALAAVPARKGRRAGLPVRPRDLSCARAVRAVLSAIRLGNDCYHAVTSEIGKHRNIVDRDRHRPRKSKSPSSFAHATARDTATRIAPAVITMANAPA
Ga0209772_1025351613300027768Bog Forest SoilAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA
Ga0209180_1034054523300027846Vadose Zone SoilAGLPVRTRDLSFARAVRAVLSAIRLGNSCYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGAKDTATRIAPAIITIANTPA
Ga0209517_1007964613300027854Peatlands SoilAAGTEMTRGVARDAALAAVPARKGRRAGKTVRPREISHARTRRAILAAIRAGKTCYTALTSAIGKYRTVTGRNRHRARKSKSPSSFGHATRKDTLTRTAEAVITMANKPA
Ga0209415_1071112333300027905Peatlands SoilARAVRAILSAIRIGQGCYQAVTSQIAGYRNVVDRSRHRARKSKSPSPFPHAGPGDTATRIATATITMANTPA
Ga0302303_1031043113300028776PalsaGPMLRSGSPDLVRQEIAAWAAGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA
Ga0302232_1031527723300028789PalsaMLRSGSPDLVRQEIAAWAAGTGITRGVVLDAALAAVPAGKGRRAGLAVRPRDLSFARALRAVLSAIRLGRDCYQAVTSEIAGYRNVVDRDRHRARKSKSPSHFPHASAKDTATRIAPAVITMANTPA
Ga0302300_120523613300030042PalsaGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA
Ga0302177_1063967313300030053PalsaAAWAAGTGITRGVVLDAALAAVPAGKGRRAGLAVRPRDLSFARALRAVLSAIRLGRDCYQAVTSEIAGYRNVVDRDRHRARKSKSPSHFPHASAKDTATRIAPAVITMANTPA
Ga0302182_1046225913300030054PalsaQEIAAWAAGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAVVTMANTPA
Ga0302179_1012410523300030058PalsaDLSHARAVGAVLSAIRLGHDCYQAVTSEIGEHRTVVDWDRHRARRSKSPSSFAHATAKDTVTRIAPAIITMANTPA
Ga0311372_1110562923300030520PalsaWAIAVGLTRGVLRDAALAAAPATRGRRAGLAVRPRDLSCARAVRAVLAAIRLGRHCYQAVTSEIAVHRNVVDRSRHRARKSKSPSPFGHASPADTVTRIATAVITMANIPA
Ga0311372_1249427613300030520PalsaSGSPDLIAQEIAAWACGTEMTRGVTRDAARAAQPARKGRRARQPVGSRDLSLTRARRLILAGIRSGRAGYQALTREISRLRNTCDRDRHRSRKSKSPSTFPHAGLKDTITRIAPAVITLANTPA
Ga0210274_123977213300030531SoilRRAGLPVRPRDLSFARAVRAVLSAIRLGHDCYQAVTSEIGQYRNTLDRDRHRARKPKPPSSFAHAGPADTVTRIAPAVITMANTPA
Ga0265460_1258809613300030740SoilAAAPVRKGRTAGLPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAEDTATRIAPAIITMANTPA
Ga0302314_1076831623300030906PalsaPATRGRRAGLAVRPRDLSCARAVRAVLAAIRLGRHCYQAVTSEIAVHRNVVDRSRHRARKSKSPSPFGHASPADTVTRIATAVITMANIPA
Ga0170834_10662971413300031057Forest SoilGRRAGLAVRTRDLSFARAVHEVLSAIRLGNSCYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGAKDTVTRIAPAVITMANTLA
Ga0265760_1036039213300031090SoilLSFARAVRAVLSAIRLGNSCYQAVTSEIAEYRNAVDRDRHRARKSKSPSSFAHAGPKDTVTRIAPAVITMANTPA
Ga0170824_11349869523300031231Forest SoilARKGRRAGLAVRPRDLSCARAVRAVLTAIRLGHDCYQAVTGEIGKHRNIVDRDRHRPRKSKSPSCFAHATARDTATRIAPAVITMANAPA
Ga0170824_11674817313300031231Forest SoilSGSPDLVRQELAAWAAGVGMTRGVVLDAALAAAPVRKGRTAGLPVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNTVDRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Ga0302325_1144428023300031234PalsaDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMANTPA
Ga0302325_1212206123300031234PalsaQAVRPRDLSCARAVRAVLSAIRLGRRCYQAVTSEIAACRNVVDRSRHRARKSKSPSTFGHASPADTVTRIATAVITMANIPS
Ga0302325_1293981213300031234PalsaWAAGTAMTRGVVLAAARAARPAGKGRRAGLEVRPRDLSFGRALRAVLSAIRLGHDRFQAVTREIAGFRNVVDRDRHRARKSKSPSAFPHATPKDTATRTAPAVITMANTPA
Ga0302325_1322242713300031234PalsaAGLAVRPRDLSCARAVRAVLAAIRLGRHCYQAVTSEIAVHRNVVDRSRHRARKSKSPSPFGHASPADTVTRIATAVITMANIPA
Ga0170819_1753710713300031469Forest SoilAAPARKGRRAGLAVRPRDLSCARAVRAVLTAIRLGHDCYQAVTSEIGKHRNIVDRDRHRPRKSKSPSSFAHATARDTATRIAPAVITMANAPA
Ga0310686_10665395933300031708SoilVRPRDLSFARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATAKDTVTRIAPAIITMANTPA
Ga0310686_11566201313300031708SoilPAASSSTPPAPRPRPGGEGRAGLTVRPRDMSFARALRAVLSAIRLGNDSYQAVTSEIAGHRNTVDRGRHRARRSKSPSSFPHASANDIATRVAPAIITMANTPA
Ga0318523_1068149013300031798SoilAVRPRDLSCARAVRAVLTAIRLGHDCYQAVTSEIGKHRNIVDRDRHRPRKSKSPSSFAHATARDTATRIAPAVITMANAPA
Ga0310912_1071432613300031941SoilSGSPDLVRQEIAAWAAGTAMTRGVLLDAAVAAVPARKGRRAGLTIRPRDLSFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHANAKDTATRIAPAIVTMANTPA
Ga0311301_1026750243300032160Peatlands SoilRDLSFARALRAVLAAIRLGNTCYQALTREIGRYRNTLGRDRHRARKSKSPSSFAHATAKDTATRIAPAIITMASTPA
Ga0311301_1061717013300032160Peatlands SoilGLTRGVVLDAALAAVPAGKGRRSGLPVRPRDLSFARAIRAVLSAIRLGHACYQAVISEIGQYRNTVDRDRHRARKSKSPSSFAHAGPADTVTRIAPAVLTMANTPA
Ga0335085_1123728713300032770SoilFARGLRAVLSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHASAKDTATRIAPAVVTMANTPA
Ga0335078_1143030113300032805SoilAPARKGRRAGLAVRPRDLSFARAVRAVLSAIRLGRGCYQAVTGEIAEYRNIVDRDRHRARKSKSPSSFTHAGAKDTVTRIAPAVITIANATA
Ga0335078_1155818413300032805SoilALAAAPVRKGRTAGLPVRPRDLSFARALRAVLSAIRTGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATPKDTATRIAPAIITMANTPA
Ga0335080_1223068513300032828SoilIAAWAAGTAMTRGVILDAAVAAVPARKGRRAGLTVRPRDLSFARGLRAVLSAIRLGRDCYQTVTSEIAGYRNVVDRDRHRARKSKSPSSFPHASAKDTATRIAPAVVTMANTPA
Ga0335081_1117250713300032892SoilSFARGLRAVLSAIRLRRDCYHAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHASAKDTATRIAPAVVTMANTPA
Ga0335081_1161511513300032892SoilRPRDLSFARGLRAALSAIRLGRDCYQAVTSEIAGYRNAVDRDRHRARKSKSPSSFPHASAKDTATRIAPAVVTMANTPA
Ga0335081_1178088113300032892SoilARGVVLDAALDAAPAVKGRRAGLEVRPRDLSFARAVRAVLSAIRLGHACYQAVTSEIAGYRNVVDRDRHRARKSKSPSSFAHAGPADTVTRIAPAVITKANSPA
Ga0335074_1000854893300032895SoilMLRSGSPDLAQQQELAAWAAAVEMTRGVARDAALTAAPARKGRRARLAVRPRDLSCARAIRPVLTAIRLGYDCYQAVTSEIGKYRNIVDRDRHRPRKSKSPSCFAHATVRDTATRIAPAVITMANAPA
Ga0335083_1048381613300032954SoilAVRTRDLSFARAVRAVLSAIRLGHGCYQAVASEIAEHRNAVDRDRHRARKSKSPSSFAHAGVKDTVTRIAPAVITMANTPA
Ga0335076_1137158813300032955SoilARALRAVLSAIRIGNTCYQAVTSEIGKYRNVVGRDRHRARKSKSPSSFAHATPKDTATRIAPAIITMANTPA
Ga0335073_1109947523300033134SoilRPRDLSHARAIRAVLSAIRLGNACYQAVTGEIGRYRNIVDRDRHRARKSKSPSSFTHATAKDTATRIAPAVITMANTPA
Ga0335077_1084558723300033158SoilLAAAPARKGRRAGLAVRPRDLSFARAVRAVLSAIRLGRGCYQAVTGEIAEYRNIVDRDRHRARKSKSPSSFTHAGAKDTVTRIAPAVITIANATA
Ga0335077_1221197613300033158SoilAGLTVRPRDLSFARALRAVLSAVRLGRDCYQAVTSEIAGFRTVVDRDRHRARKSKSPSSFPHAGPADTVTRIAPAVITMANTPS
Ga0326723_0235815_536_8143300034090Peat SoilVPARKGRRAGLPVRPRDLSFARAVRAVLSAIRLGHDCYKAVTSEIGQYRNTLDRDRHRARKSKSPSSFAHAGPAGTVTRIAPAVITMANTPA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.