Metagenome / Metatranscriptome Family F039209

Basic Information
Family ID	F039209
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	71 residues
Representative Sequence	MLAGLVINLIASILIGYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Number of Associated Samples	127
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	8.54 %
% of genes near scaffold ends (potentially truncated)	24.39 %
% of genes from short scaffolds (< 2000 bps)	78.05 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Archaea (94.512 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.293 % of family members)
Environment Ontology (ENVO)	Unclassified (30.488 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.512 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.73% β-sheet: 0.00% Coil/Unstructured: 36.27%
Feature Viewer

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Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF08423	Rad51	6.10
PF03358	FMN_red	2.44
PF00072	Response_reg	1.83
PF14417	MEDS	1.83
PF06348	DUF1059	1.83
PF00300	His_Phos_1	1.83
PF01938	TRAM	1.22
PF05067	Mn_catalase	1.22
PF00903	Glyoxalase	1.22
PF03083	MtN3_slv	1.22
PF13561	adh_short_C2	1.22
PF09250	Prim-Pol	0.61
PF01544	CorA	0.61
PF12697	Abhydrolase_6	0.61
PF09939	DUF2171	0.61
PF00296	Bac_luciferase	0.61
PF01904	DUF72	0.61
PF00382	TFIIB	0.61
PF07995	GSDH	0.61
PF00393	6PGD	0.61
PF06150	ChaB	0.61
PF13307	Helicase_C_2	0.61
PF06831	H2TH	0.61
PF14947	HTH_45	0.61
PF02775	TPP_enzyme_C	0.61
PF00175	NAD_binding_1	0.61
PF00149	Metallophos	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	6.10
COG3546	Mn-containing catalase (includes spore coat protein CotJC)	Inorganic ion transport and metabolism [P]	1.22
COG4095	Sugar transporter, SemiSWEET family, contains PQ motif	Carbohydrate transport and metabolism [G]	1.22
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.61
COG0362	6-phosphogluconate dehydrogenase	Carbohydrate transport and metabolism [G]	0.61
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.61
COG1023	6-phosphogluconate dehydrogenase (decarboxylating)	Carbohydrate transport and metabolism [G]	0.61
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.61
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.61
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.61
COG4572	Cation transport regulator ChaB	Inorganic ion transport and metabolism [P]	0.61

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.73 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.73 %
Unclassified	root	N/A	4.27 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	94.51 %
Unclassified	root	N/A	4.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.22 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	12.80 %
Unclassified	root	N/A	4.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.22 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	12.80 %
Unclassified	root	N/A	4.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.22 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	12.80 %
Unclassified	root	N/A	4.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.22 %

Name	Rank	Taxonomy	Distribution
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	12.80 %
Unclassified	root	N/A	4.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.22 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	12.80 %
Unclassified	root	N/A	4.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.22 %

Name	Rank	Taxonomy	Distribution
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	9.76 %
Unclassified	root	N/A	4.27 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	1.22 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.27 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1.22 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.22 %
Candidatus Nitrosocosmicus hydrocola	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola	1.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8870230	All Organisms → cellular organisms → Archaea	10010	Open in IMG/M
2140918013\|NODE_710983_length_1028_cov_4.293774	All Organisms → cellular organisms → Archaea	1060	Open in IMG/M
2162886006\|SwRhRL3b_contig_1552041	All Organisms → cellular organisms → Archaea	1568	Open in IMG/M
2162886012\|MBSR1b_contig_6155191	All Organisms → cellular organisms → Archaea	1072	Open in IMG/M
2228664021\|ICCgaii200_c0225680	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola	618	Open in IMG/M
2228664021\|ICCgaii200_c1032722	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2269	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0739811	All Organisms → cellular organisms → Archaea	2153	Open in IMG/M
3300000043\|ARcpr5yngRDRAFT_c003273	All Organisms → cellular organisms → Archaea	1611	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c006583	All Organisms → cellular organisms → Archaea	973	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10987928	All Organisms → cellular organisms → Archaea	982	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11445906	All Organisms → cellular organisms → Archaea	2306	Open in IMG/M
3300000559\|F14TC_101749021	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1009991	Not Available	1047	Open in IMG/M
3300000787\|JGI11643J11755_11763066	All Organisms → cellular organisms → Archaea	1959	Open in IMG/M
3300000858\|JGI10213J12805_10804563	All Organisms → cellular organisms → Archaea	885	Open in IMG/M
3300002099\|JGI24808J26613_1005223	All Organisms → cellular organisms → Archaea	3354	Open in IMG/M
3300002100\|JGI24809J26612_1033638	All Organisms → cellular organisms → Archaea	821	Open in IMG/M
3300002568\|C688J35102_120974509	All Organisms → cellular organisms → Archaea	4038	Open in IMG/M
3300002899\|JGIcombinedJ43975_10001414	All Organisms → cellular organisms → Archaea	3673	Open in IMG/M
3300003267\|soilL1_10000605	All Organisms → cellular organisms → Archaea	25532	Open in IMG/M
3300003319\|soilL2_10162038	All Organisms → cellular organisms → Archaea	2829	Open in IMG/M
3300004114\|Ga0062593_100064996	All Organisms → cellular organisms → Archaea	2374	Open in IMG/M
3300004114\|Ga0062593_102496319	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300004157\|Ga0062590_102168150	All Organisms → cellular organisms → Archaea	581	Open in IMG/M
3300004463\|Ga0063356_100709137	All Organisms → cellular organisms → Archaea	1385	Open in IMG/M
3300004463\|Ga0063356_102254163	All Organisms → cellular organisms → Archaea	830	Open in IMG/M
3300004463\|Ga0063356_102254818	All Organisms → cellular organisms → Archaea	830	Open in IMG/M
3300004463\|Ga0063356_105255342	All Organisms → cellular organisms → Archaea	556	Open in IMG/M
3300004463\|Ga0063356_105913189	All Organisms → cellular organisms → Archaea	525	Open in IMG/M
3300004479\|Ga0062595_101394791	All Organisms → cellular organisms → Archaea	638	Open in IMG/M
3300004479\|Ga0062595_101631396	All Organisms → cellular organisms → Archaea	603	Open in IMG/M
3300004480\|Ga0062592_102030024	All Organisms → cellular organisms → Archaea	569	Open in IMG/M
3300004480\|Ga0062592_102610983	All Organisms → cellular organisms → Archaea	510	Open in IMG/M
3300005093\|Ga0062594_100030479	All Organisms → cellular organisms → Archaea	2464	Open in IMG/M
3300005093\|Ga0062594_100725411	Not Available	902	Open in IMG/M
3300005093\|Ga0062594_101233987	All Organisms → cellular organisms → Archaea	744	Open in IMG/M
3300005093\|Ga0062594_101922110	All Organisms → cellular organisms → Archaea	629	Open in IMG/M
3300005186\|Ga0066676_10018175	All Organisms → cellular organisms → Bacteria	3621	Open in IMG/M
3300005186\|Ga0066676_10926696	All Organisms → cellular organisms → Archaea	583	Open in IMG/M
3300005289\|Ga0065704_10000580	All Organisms → cellular organisms → Archaea	17909	Open in IMG/M
3300005289\|Ga0065704_10014648	All Organisms → cellular organisms → Archaea	1709	Open in IMG/M
3300005289\|Ga0065704_10732320	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300005293\|Ga0065715_10973531	All Organisms → cellular organisms → Archaea	553	Open in IMG/M
3300005328\|Ga0070676_10073684	All Organisms → cellular organisms → Archaea	2055	Open in IMG/M
3300005332\|Ga0066388_106900615	All Organisms → cellular organisms → Archaea	572	Open in IMG/M
3300005334\|Ga0068869_100086992	All Organisms → cellular organisms → Archaea	2344	Open in IMG/M
3300005334\|Ga0068869_100097968	All Organisms → cellular organisms → Archaea	2214	Open in IMG/M
3300005335\|Ga0070666_11443306	All Organisms → cellular organisms → Archaea	514	Open in IMG/M
3300005340\|Ga0070689_101907378	All Organisms → cellular organisms → Archaea	543	Open in IMG/M
3300005344\|Ga0070661_100193900	All Organisms → cellular organisms → Archaea	1550	Open in IMG/M
3300005457\|Ga0070662_100230327	All Organisms → cellular organisms → Archaea	1482	Open in IMG/M
3300005558\|Ga0066698_10076132	All Organisms → cellular organisms → Archaea	2174	Open in IMG/M
3300005564\|Ga0070664_101530414	All Organisms → cellular organisms → Archaea	631	Open in IMG/M
3300005577\|Ga0068857_100359644	All Organisms → cellular organisms → Archaea	1349	Open in IMG/M
3300005578\|Ga0068854_100801677	All Organisms → cellular organisms → Archaea	821	Open in IMG/M
3300005886\|Ga0075286_1041230	All Organisms → cellular organisms → Archaea	631	Open in IMG/M
3300005888\|Ga0075289_1051299	All Organisms → cellular organisms → Archaea	648	Open in IMG/M
3300005937\|Ga0081455_11053164	All Organisms → cellular organisms → Archaea	503	Open in IMG/M
3300006038\|Ga0075365_10642607	All Organisms → cellular organisms → Archaea	750	Open in IMG/M
3300006049\|Ga0075417_10043984	Not Available	1902	Open in IMG/M
3300006194\|Ga0075427_10009381	Not Available	1458	Open in IMG/M
3300006196\|Ga0075422_10484333	All Organisms → cellular organisms → Archaea	559	Open in IMG/M
3300006847\|Ga0075431_100100579	Not Available	2983	Open in IMG/M
3300006853\|Ga0075420_101937460	All Organisms → cellular organisms → Archaea	503	Open in IMG/M
3300006854\|Ga0075425_100365066	All Organisms → cellular organisms → Archaea	1662	Open in IMG/M
3300006880\|Ga0075429_100051811	All Organisms → cellular organisms → Archaea	3570	Open in IMG/M
3300006881\|Ga0068865_100767259	Not Available	829	Open in IMG/M
3300006904\|Ga0075424_102453996	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300006969\|Ga0075419_10008553	Not Available	6379	Open in IMG/M
3300009094\|Ga0111539_10015159	All Organisms → cellular organisms → Archaea	9603	Open in IMG/M
3300009094\|Ga0111539_10115465	All Organisms → cellular organisms → Archaea	3148	Open in IMG/M
3300009146\|Ga0105091_10106394	All Organisms → cellular organisms → Archaea	1289	Open in IMG/M
3300009147\|Ga0114129_10061270	All Organisms → cellular organisms → Archaea	5258	Open in IMG/M
3300009147\|Ga0114129_11832182	All Organisms → cellular organisms → Archaea	737	Open in IMG/M
3300009147\|Ga0114129_12739144	All Organisms → cellular organisms → Archaea	587	Open in IMG/M
3300009156\|Ga0111538_10104651	All Organisms → cellular organisms → Archaea	3596	Open in IMG/M
3300009156\|Ga0111538_11575769	All Organisms → cellular organisms → Archaea	828	Open in IMG/M
3300009157\|Ga0105092_10433739	All Organisms → cellular organisms → Archaea	749	Open in IMG/M
3300009162\|Ga0075423_10650095	All Organisms → cellular organisms → Archaea	1112	Open in IMG/M
3300009176\|Ga0105242_10825173	All Organisms → cellular organisms → Archaea	920	Open in IMG/M
3300009176\|Ga0105242_12094805	All Organisms → cellular organisms → Archaea	609	Open in IMG/M
3300009176\|Ga0105242_12495629	All Organisms → cellular organisms → Archaea	565	Open in IMG/M
3300010362\|Ga0126377_10207240	All Organisms → cellular organisms → Archaea	1883	Open in IMG/M
3300010362\|Ga0126377_11465076	All Organisms → cellular organisms → Archaea	756	Open in IMG/M
3300010371\|Ga0134125_12134806	All Organisms → cellular organisms → Archaea	609	Open in IMG/M
3300010373\|Ga0134128_10688135	All Organisms → cellular organisms → Archaea	1136	Open in IMG/M
3300010397\|Ga0134124_12315779	All Organisms → cellular organisms → Archaea	578	Open in IMG/M
3300010399\|Ga0134127_12176731	All Organisms → cellular organisms → Archaea	633	Open in IMG/M
3300010399\|Ga0134127_12883857	All Organisms → cellular organisms → Archaea	560	Open in IMG/M
3300010400\|Ga0134122_10183554	All Organisms → cellular organisms → Archaea	1724	Open in IMG/M
3300012212\|Ga0150985_100045241	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1565	Open in IMG/M
3300012469\|Ga0150984_109018371	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1708	Open in IMG/M
3300012474\|Ga0157356_1003530	All Organisms → cellular organisms → Archaea	813	Open in IMG/M
3300012493\|Ga0157355_1009374	All Organisms → cellular organisms → Archaea	738	Open in IMG/M
3300012502\|Ga0157347_1045697	All Organisms → cellular organisms → Archaea	591	Open in IMG/M
3300012513\|Ga0157326_1021330	All Organisms → cellular organisms → Archaea	802	Open in IMG/M
3300012898\|Ga0157293_10007275	All Organisms → cellular organisms → Archaea	1661	Open in IMG/M
3300012938\|Ga0162651_100031694	All Organisms → cellular organisms → Archaea	776	Open in IMG/M
3300012951\|Ga0164300_10429604	All Organisms → cellular organisms → Archaea	735	Open in IMG/M
3300012951\|Ga0164300_10476865	All Organisms → cellular organisms → Archaea	707	Open in IMG/M
3300012955\|Ga0164298_11015977	All Organisms → cellular organisms → Archaea	614	Open in IMG/M
3300012957\|Ga0164303_10111589	All Organisms → cellular organisms → Archaea	1377	Open in IMG/M
3300012957\|Ga0164303_10122941	All Organisms → cellular organisms → Archaea	1327	Open in IMG/M
3300012958\|Ga0164299_10187085	All Organisms → cellular organisms → Archaea	1184	Open in IMG/M
3300012960\|Ga0164301_10308510	All Organisms → cellular organisms → Archaea	1069	Open in IMG/M
3300012960\|Ga0164301_10673941	All Organisms → cellular organisms → Archaea	774	Open in IMG/M
3300012961\|Ga0164302_10110297	All Organisms → cellular organisms → Archaea	1542	Open in IMG/M
3300012961\|Ga0164302_10210526	All Organisms → cellular organisms → Archaea	1204	Open in IMG/M
3300012984\|Ga0164309_11314042	All Organisms → cellular organisms → Archaea	612	Open in IMG/M
3300012985\|Ga0164308_10470714	All Organisms → cellular organisms → Archaea	1044	Open in IMG/M
3300012986\|Ga0164304_10932148	All Organisms → cellular organisms → Archaea	682	Open in IMG/M
3300012988\|Ga0164306_10681081	All Organisms → cellular organisms → Archaea	815	Open in IMG/M
3300014745\|Ga0157377_10068494	All Organisms → cellular organisms → Archaea	2045	Open in IMG/M
3300015371\|Ga0132258_10528344	All Organisms → cellular organisms → Archaea	2954	Open in IMG/M
3300015371\|Ga0132258_10617845	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	2722	Open in IMG/M
3300015371\|Ga0132258_10945591	All Organisms → cellular organisms → Archaea	2177	Open in IMG/M
3300015371\|Ga0132258_11310885	All Organisms → cellular organisms → Archaea	1830	Open in IMG/M
3300015372\|Ga0132256_100022262	All Organisms → cellular organisms → Archaea	5641	Open in IMG/M
3300015372\|Ga0132256_103224955	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300015373\|Ga0132257_103038729	All Organisms → cellular organisms → Archaea	611	Open in IMG/M
3300015373\|Ga0132257_103894668	All Organisms → cellular organisms → Archaea	543	Open in IMG/M
3300015374\|Ga0132255_100934905	All Organisms → cellular organisms → Archaea	1298	Open in IMG/M
3300018000\|Ga0184604_10008841	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2049	Open in IMG/M
3300018000\|Ga0184604_10088811	All Organisms → cellular organisms → Archaea	937	Open in IMG/M
3300018027\|Ga0184605_10152065	All Organisms → cellular organisms → Archaea	1042	Open in IMG/M
3300018028\|Ga0184608_10136303	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300018051\|Ga0184620_10023205	All Organisms → cellular organisms → Archaea	1565	Open in IMG/M
3300018054\|Ga0184621_10209074	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	699	Open in IMG/M
3300018061\|Ga0184619_10477236	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	553	Open in IMG/M
3300018071\|Ga0184618_10052798	All Organisms → cellular organisms → Archaea	1483	Open in IMG/M
3300018076\|Ga0184609_10037756	All Organisms → cellular organisms → Archaea	2017	Open in IMG/M
3300019356\|Ga0173481_10530442	All Organisms → cellular organisms → Archaea	606	Open in IMG/M
3300019867\|Ga0193704_1030293	All Organisms → cellular organisms → Archaea	1092	Open in IMG/M
3300019868\|Ga0193720_1056892	All Organisms → cellular organisms → Archaea	544	Open in IMG/M
3300019873\|Ga0193700_1014591	All Organisms → cellular organisms → Archaea	1286	Open in IMG/M
3300019878\|Ga0193715_1030197	All Organisms → cellular organisms → Archaea	1176	Open in IMG/M
3300019879\|Ga0193723_1197789	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	504	Open in IMG/M
3300020004\|Ga0193755_1099400	All Organisms → cellular organisms → Archaea	922	Open in IMG/M
3300020008\|Ga0193757_1011248	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	870	Open in IMG/M
3300020012\|Ga0193732_1023546	All Organisms → cellular organisms → Archaea	1067	Open in IMG/M
3300020015\|Ga0193734_1059675	All Organisms → cellular organisms → Archaea	688	Open in IMG/M
3300021078\|Ga0210381_10043975	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1314	Open in IMG/M
3300021078\|Ga0210381_10249134	All Organisms → cellular organisms → Archaea	631	Open in IMG/M
3300022915\|Ga0247790_10156784	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola	588	Open in IMG/M
3300023266\|Ga0247789_1069409	All Organisms → cellular organisms → Archaea	671	Open in IMG/M
3300025290\|Ga0207673_1031175	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola	739	Open in IMG/M
3300025315\|Ga0207697_10011089	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3820	Open in IMG/M
3300025899\|Ga0207642_10629001	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	671	Open in IMG/M
3300025901\|Ga0207688_11027777	All Organisms → cellular organisms → Archaea	520	Open in IMG/M
3300025936\|Ga0207670_11326253	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	610	Open in IMG/M
3300025981\|Ga0207640_11761188	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	560	Open in IMG/M
3300026116\|Ga0207674_10236297	All Organisms → cellular organisms → Archaea	1775	Open in IMG/M
3300026324\|Ga0209470_1114757	All Organisms → cellular organisms → Archaea	1199	Open in IMG/M
3300026820\|Ga0207603_106079	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	538	Open in IMG/M
3300027873\|Ga0209814_10014348	All Organisms → cellular organisms → Archaea	3160	Open in IMG/M
3300027909\|Ga0209382_10013551	All Organisms → cellular organisms → Archaea	10020	Open in IMG/M
3300027909\|Ga0209382_10697918	All Organisms → cellular organisms → Archaea	1092	Open in IMG/M
3300027909\|Ga0209382_12080188	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	541	Open in IMG/M
3300028828\|Ga0307312_10190787	All Organisms → cellular organisms → Archaea	1314	Open in IMG/M
3300030903\|Ga0308206_1205621	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	501	Open in IMG/M
3300031092\|Ga0308204_10088416	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	833	Open in IMG/M
3300031562\|Ga0310886_10724735	All Organisms → cellular organisms → Archaea	621	Open in IMG/M
3300031716\|Ga0310813_10842664	All Organisms → cellular organisms → Archaea	828	Open in IMG/M
3300033412\|Ga0310810_10023376	All Organisms → cellular organisms → Archaea	7489	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.54%
Host-Associated	Host-Associated	41.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.61%
Plants	Host-Associated → Plants	41.46%
Aquatic	Environmental → Aquatic	7.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.51%
Sediment	Environmental → Aquatic → Sediment	5.49%
Freshwater	Environmental → Aquatic → Freshwater	2.44%
Roots	Host-Associated → Plants → Roots	1.22%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.49%
Loam	Environmental → Terrestrial → Soil → Loam	3.66%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.22%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.61%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.44%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.22%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.61%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.66%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.22%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.22%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.22%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.22%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.61%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.61%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026820	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-A (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00046230	2088090015	Soil	MNLIASVLIGYGRIFRSKKTIKKESQTRGDLNVHEERHRLIETRVAQIGAILLAIGFAVQIWGNLTDS
Iowa-Corn-GraphCirc_02132260	2140918013	Soil	MLAGLLINLIASILISYGRIFRSRKTIEKESITDGHENIHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVES
SwRhRL3b_0909.00000960	2162886006	Switchgrass Rhizosphere	MLTGLVLNLVASILIGYGRIFRSKKAIQKESQTNGIENTYEEKRRLIETRVAQIGAGLLAIGFAVQIWGNLTES
MBSR1b_0163.00001310	2162886012	Miscanthus Rhizosphere	LIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS
ICCgaii200_02256801	2228664021	Soil	MMTDSIVLAGLVTNLIASMLLGYGRIFRSKKTIINESKTGGNENIHEEKHRLLETRIAQVGAALLTIGFAIQIWGVTLD
ICCgaii200_10327224	2228664021	Soil	VTNLIASILIGYGRIFRSKKTIEKESQTHYDKNIYEEKHRLIETRIAQVGAVLLAIGFAIQIWGNVSEG
ICChiseqgaiiDRAFT_07398112	3300000033	Soil	MTDSIVLAGLVTNLIASMLLGYGRIFRSKKTIINESKTGGNENIHEEKHRLLETRIAQVGAALLTIGFAIQIWGVTLD*
ARcpr5yngRDRAFT_0032733	3300000043	Arabidopsis Rhizosphere	LIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQIGAVLLAIGFAVQIWGNLADS*
ARSoilOldRDRAFT_0065831	3300000044	Arabidopsis Rhizosphere	LTLNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLTDS*
ICChiseqgaiiFebDRAFT_109879281	3300000363	Soil	VTNLIASILIGYGRIFRSKKTIEKESQTHYDKNIYEEKHRLIETRIAQVGAVLLAIGFAIQIWGNVSEG*
ICChiseqgaiiFebDRAFT_114459064	3300000363	Soil	MNLIASVLIGYGRIFRSKKTIKKESQTRGDLNVHEERHRLIETRVAQIGAILLAIGFAVQIWGNLTDS*
F14TC_1017490212	3300000559	Soil	MTKTLILAGLIMNLIASILIGYGRIFRSKKTIAKESQNLGNENLYEERHRLIETRVAQIGAILLAIGFAVQIWGNLTDS*
KanNP_Total_noBrdU_T14TCDRAFT_10099911	3300000596	Soil	MNLIASVLIGYGRIFRSKKTIKKESETRGEENVYEERHRLIETRVAQIGAVLLAIGFAVQIWGNLTDS*
JGI11643J11755_117630663	3300000787	Soil	MLAGLXINLIASIXISYGRIFRSXKTIEKESITDGHENIHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVES*
JGI10213J12805_108045632	3300000858	Soil	MTKILILSGLIMNLIASVLIAYGRIFRSKKTIEKESQTRGDKNVYEERHRLIETRVAQIGVVLLSIGFAVQIWGNMTEG*
JGI24808J26613_10052236	3300002099	Soil	KILILSGLIMNLIASVLIGYGRIFRSKKTIKKESQTRGDLNVHEERHRLIETRVAQIGAILLAIGFAVQIWGNLTDS*
JGI24809J26612_10336383	3300002100	Soil	LTKILILSGLIMNLIASVLIGYGRIFRSKKTIKKESQTRGDLNVHEERHRLIETRVAQIGAILLAIGFAVQIWGNLTDS*
C688J35102_1209745093	3300002568	Soil	MSVNSIIIIGLGFNLIASVLIAYGRIFRSKRTIRKESETGESYNVHEEKHRLIETRIAQAGALLLVVGFTLQVIGNVFD*
JGIcombinedJ43975_100014146	3300002899	Soil	MNLIASVLIGYGRIFRSKKTIKKESQTRGDLNVHEERHXLIETRVAQIGAILLAIGFAVQIWGNLTDS*
soilL1_100006059	3300003267	Sugarcane Root And Bulk Soil	MTGSLILIGLIMNLIASILISYGRIFRSKKTIQKESQTEGPVNPFEEKHRLLETRIAQVGAILLAMGFAVQISGNLIES*
soilL2_101620385	3300003319	Sugarcane Root And Bulk Soil	MTKIIALAGLVINLFASILIGYGRIFRSKKTIRKESQTAGRQNEYEEKRRLIETRIAQIGAILLIAGFAVQIWGNVTDT*
Ga0062593_1000649963	3300004114	Soil	MIKIVALSGLIINLIASILIGYGRIFRSKKTIQKESQNNGRENMYEERRRLIETRVAQLGAVLLTLGFSIQIWGNISDS*
Ga0062593_1024963191	3300004114	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITEGHENVHEEKHRLIETRVAQVGAVLLAVGFAIQIWGITIDS*
Ga0062590_1021681501	3300004157	Soil	LSKSILLVGLVINLIASIMISYGRIFRSKKTIKKESLTDGHENIHEEKHRLLETRIAQIGAVLLSAGFAIQIWGNVVDG*
Ga0063356_1007091372	3300004463	Arabidopsis Thaliana Rhizosphere	MMTDSIVLAGLVTNLIASMLLGYGRIFRSKKTIINESKTGGNENIHEEKHRLLETRIAQVGAALLTIGFAIQIWGVTLD*
Ga0063356_1022541632	3300004463	Arabidopsis Thaliana Rhizosphere	MLAGLVINLIASILISYGRIFRSKKTIKKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTAVDS*
Ga0063356_1022548181	3300004463	Arabidopsis Thaliana Rhizosphere	MVGYGRIFRSKKTIEKESQTRFDENVYEEKHRLLETRIAQIGAALLAIGFAMQIWGNVAEG*
Ga0063356_1052553421	3300004463	Arabidopsis Thaliana Rhizosphere	MLAGLLINLIASILISYGRIFRSRKTIEKESITDGHENIHEEKHRLIETRVAQVGVILLAIGFAIQIWGTTVDS*
Ga0063356_1059131891	3300004463	Arabidopsis Thaliana Rhizosphere	MTKTLILAGLIMNLIASILIGYGRIFRSKKTIAKESQNLGKENLYEERHRLIETRVAQIGAILLAIGFAVQIWGNLTDS*
Ga0062595_1013947911	3300004479	Soil	MMTDSIVLAGLVTNLIASMLLGYGRIFRSKKTIINESKTGGNENIHEEKHRLLETRIAQVGAALLTIGFAIQIWGVTLG*
Ga0062595_1016313961	3300004479	Soil	LIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS*
Ga0062592_1020300241	3300004480	Soil	MAKTLMLIGLVINLIASILIGYGRIFRSKKTIKKESQTHYDENVYEEKHRLLETRIAQLGAALLAVGFAMQIWGNVIEG*
Ga0062592_1026109831	3300004480	Soil	LIASIMISYGRIFRSKKTIKKESLTDGHENIHEEKHRLLETRIAQIGAVLLSAGFAIQIWGNVVDG*
Ga0062594_1000304791	3300005093	Soil	LTTSILLLGLVINLIASIMISYGRIFRSKKTIKKESLTDGHENIHEEKHRLLETRIAQVGAMLLSTGFAIQIWGNVADS
Ga0062594_1007254112	3300005093	Soil	MIAYGRIFRSKKTIEKESKTDGAANPHEEKHRLLETRIAQVGAVLLSIGFAIQIWGNLADS*
Ga0062594_1012339871	3300005093	Soil	LVASIMISYGRIFRSKKTIKKESLTVGYKNIHEEKHRLLETRIAQVGAVLLSAGFAIQIWGNMAD
Ga0062594_1019221102	3300005093	Soil	MLAGLLINLIASILISYGRIFRSRKTIEKESITDGHENIHEEKHRLIETRVAQVGVVLLAIGFAIQIWGTTVDS*
Ga0066676_100181755	3300005186	Soil	MNLVASILIGYGRIFRSKKTIEKESQTSGNENVYEERHRLIETRVAQIGAVLLAVGFAVQIWGNLTDS*
Ga0066676_109266962	3300005186	Soil	MNLIASVLIGYGRIFRSKKTIKKESQTRGDENVYEERHRLIETRVVQIGAVLLAIGFGVQIWGNLTERKC*
Ga0065704_100005807	3300005289	Switchgrass Rhizosphere	MTKIIMLTGLVLNLVASILIGYGRIFRSKKAIQKESQTNGIENTYEEKRRLIETRVAQIGAGLLAIGFAVQIWGNLTES*
Ga0065704_100146482	3300005289	Switchgrass Rhizosphere	MMTDSIVLAGLVTNLIASMLLGYGRIFRSKKTIINESKTGGNENIHEEKHRLLETRIAQVGAALLTIGFAIQIWGVSLD*
Ga0065704_107323202	3300005289	Switchgrass Rhizosphere	MLAGLVINLIASILISYGRIFRSKKTIKKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0065715_109735312	3300005293	Miscanthus Rhizosphere	LGLAINLIASIMISYGRIFRSKKTIKKESLTDGHENIHEEKHRLLETRIAQVGAVLLSAGFAIQIWGNVLDG*
Ga0070676_100736842	3300005328	Miscanthus Rhizosphere	LILNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS*
Ga0066388_1069006152	3300005332	Tropical Forest Soil	MMTNSIVLGGLVTSLIASILLSYGRIFRSKKTIIKESKTDNTENVHEEKHRLLETRVAQAGAVLLTIGFAIQIWGHTQ
Ga0068869_1000869926	3300005334	Miscanthus Rhizosphere	VINLVASVMISYGRIFRSRKTIKKESETHHIENVYEAKHRLLETRIAQVGAVLLAIGFAMQIWGNLTEG*
Ga0068869_1000979683	3300005334	Miscanthus Rhizosphere	MIKIVALSGLIINLIASILIGYGRIFRSKKIIQKESQNNGRENMYEERRRLIETRVAQLGAVLLTLGFSIQIWGNISDS*
Ga0070666_114433061	3300005335	Switchgrass Rhizosphere	MLILSGLVLNLIASILIGYGRIFRPKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS*
Ga0070689_1019073781	3300005340	Switchgrass Rhizosphere	HFSGRTMIKIVALSGPIINLIASILIGYGRIFRSKKTIQKESQNNGRENMYEERRRLIETRVAQLGAVLLTLGFSIQIWGNISDS*
Ga0070661_1001939001	3300005344	Corn Rhizosphere	INLVASVMISYGRIFRSRKTIKKESETHHIENVYEAKHRLLETRIAQVGAVLLAIGFAMQIWGNLTEG*
Ga0070662_1002303272	3300005457	Corn Rhizosphere	LTNILILSGLILNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS*
Ga0066698_100761323	3300005558	Soil	LTKIIILSGLIMNLVASILIGYGRIFRSKKTIEKESQTSGNENVYEERHRLIETRVAQIGAVLLAVGFAVQIWGNLTDS*
Ga0070664_1015304141	3300005564	Corn Rhizosphere	MISYGRIFRSKKTIKKESLTDGHENIHEEKHRLLETRIAQVGAMLLSTGFAIQIWGNVADS*
Ga0068857_1003596441	3300005577	Corn Rhizosphere	MAKTLMLIGLVINLIASILIGYGRIFRSKKTIKKESQTHYDENVYEEKHRLLETRIAQLGAALLAVGFAMQIW
Ga0068854_1008016772	3300005578	Corn Rhizosphere	MLILSGLVLNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS*
Ga0075286_10412301	3300005886	Rice Paddy Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGDENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0075289_10512992	3300005888	Rice Paddy Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0081455_110531641	3300005937	Tabebuia Heterophylla Rhizosphere	MNLIASVMIGYGRIFRSKKTIVRESQTRYEENVYEERHRLLETRVAQMGAALLAIGFALQISGKLDRKLTLFYIL*
Ga0075365_106426071	3300006038	Populus Endosphere	MLLGYGRIFRSKKTIEKESRNEGPENVYEKKHRLIETRVAQAGAVLLSIGFAVQIYGVANDN*
Ga0075417_100439844	3300006049	Populus Rhizosphere	MNLIASVLIGYGRIFRSKKTIEKESQNRGEENVYEERHRLLETRVAQIGAVLLAIGFAVQIWGNLTDS*
Ga0075427_100093814	3300006194	Populus Rhizosphere	MNLIASVLIGYGRIFRSKKTIEKESQNRGEENVYEERHRLLETRVAQIGAVLLAIGFAVQIWGNFTDS*
Ga0075422_104843331	3300006196	Populus Rhizosphere	INLIASILIGYGRIFRSKKTIKKESQTHYDENVYEEKHRLLETRIAQLGAALLAVGFAMQIWGNVTEG*
Ga0075431_1001005794	3300006847	Populus Rhizosphere	MVQMLILSGLIVNLIASILMGYGRIFRSKKTIMKESQTDGPKNVQEEKHRLLETRIAQIGAVLLAVGFAIQIWGNIVDG*
Ga0075420_1019374601	3300006853	Populus Rhizosphere	LSKIFILTGLIINLIASMLLGYGRIFRSKKTIEKESRNEGPENVYEKKHRLIETRVAQAGAVLLSIGFAVQIYGVANDN*
Ga0075425_1003650663	3300006854	Populus Rhizosphere	ILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS*
Ga0075429_1000518119	3300006880	Populus Rhizosphere	GRIFRSKKTIEKESQNRGEENVYEERHRLLETRVAQIGAVLLAIGFAVQIWGNLTDS*
Ga0068865_1007672591	3300006881	Miscanthus Rhizosphere	MIAYGRIFRSKKTIEKESKTDGATNPHEEKHRLLETRIAQVGAVLLSIGFAIQIWGNLADS*
Ga0075424_1024539962	3300006904	Populus Rhizosphere	LILNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNL
Ga0075419_1000855310	3300006969	Populus Rhizosphere	MNLIASVLIGYGRIFRSKKTIEKESQNRGDENVYEERHRLLETRVAQIGAVLLAIGFAVQIWGNLTDS*
Ga0111539_100151597	3300009094	Populus Rhizosphere	LNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLTDS*
Ga0111539_101154651	3300009094	Populus Rhizosphere	MVQMLILSGLIVNLIASILIGYGRIFRSKKTIVKESQTDGPKNVHEEKHRLLETRFAQIGAVLLAVGFAIQIWGNIVDG*
Ga0105091_101063942	3300009146	Freshwater Sediment	ASMLLGYGRIFRSKKTIEKESRNEGPENVHEKKHRLIETRVAQAGAVLLSIGFAVQIYGVANDN*
Ga0114129_100612708	3300009147	Populus Rhizosphere	YGRIFRSKKTIEKESQNRGEENVYEERHRLLETRVAQIGAVLLAIGFAVQIWGNLTDS*
Ga0114129_118321821	3300009147	Populus Rhizosphere	MVNSVVIVGLSISLIASMLIAYGRIFRSKKTIMKESQTDGHQNIHEIRHRLLETRIAQIGAALLSIGFALQLTGNFMD*
Ga0114129_127391441	3300009147	Populus Rhizosphere	MVQMLILSGLIVNLIASILIGYGRIFRSKKTIMKESQTDGPKNVHEEKHRLLETRIAQIGAVLLTVGFAIQIWGNIADG*
Ga0111538_101046514	3300009156	Populus Rhizosphere	LNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS*
Ga0111538_115757691	3300009156	Populus Rhizosphere	MVQMLILSGLIVNLIASILIGYGRIFRSKKTIMKESQTDGPKNVHEEKHRLLETRIAQIGAVLLAVGFAIQIWGNIVDG*
Ga0105092_104337392	3300009157	Freshwater Sediment	MLLGYGRIFRSKKTIEKESRNEGPENVHEKKHRLIETRVAQAGAVLLSIGFAVQIYGVANDN*
Ga0075423_106500951	3300009162	Populus Rhizosphere	YGRIFRSKKTIEKESQNRGEENVYEERHRLLETRVAQIGAVLLAIGFAVQIWGNLIDS*
Ga0105242_108251731	3300009176	Miscanthus Rhizosphere	MISYGRIFRSKKTIKKESLTDRHENIDEEKHRLLETRIAQVGAMLLSTGFAIQIWGNVADS*
Ga0105242_120948051	3300009176	Miscanthus Rhizosphere	MISYGRIFRSKKTIKKESLTVGYKNIHEEKHRLLETRIAQVGAVLLSAGFAIQIWGNMAD
Ga0105242_124956291	3300009176	Miscanthus Rhizosphere	FRSRKTIKKESETHHIENVYEAKHRLLETRIAQVGAVLLAIGFAMQIWGNLTEG*
Ga0126377_102072402	3300010362	Tropical Forest Soil	MTNTIVLGGLVTNLVASILLSYGRIFRSKKTIIKESKTDNTENVHEEKHRLLETRVAQAGAVLLTIGFAIQIWGHTQE*
Ga0126377_114650762	3300010362	Tropical Forest Soil	MMTNSIILAGLVANLIASILLSYGRIFRSKKTIKKESKTDHSENVHEEKHRLLETRVAQVGAVLLTIGFAIQIWGHTQE*
Ga0134125_121348061	3300010371	Terrestrial Soil	MISYGRIFRSKKTIKKESLTEGHENIHEEKHRLLETRIAQVGAVLLSAGFAIQIWGNVLDG*
Ga0134128_106881352	3300010373	Terrestrial Soil	MTKIVALSGLIINLIASILIGYGRIFRSKKTIQKESQNNGRENMYEERHRLIETRVAQVGAVLLALGFSIQIWGNISDS*
Ga0134124_123157791	3300010397	Terrestrial Soil	IMISYGRIFRSKKTIKKESLTDGYENIHEERHRLLETRIAQVGAVLLTAGFAIQIWGNLADG*
Ga0134127_121767312	3300010399	Terrestrial Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAVGFAIQIWGITIDS*
Ga0134127_128838572	3300010399	Terrestrial Soil	LILNLIASMLISYGRIFRSKQTIEKESKNDGHKNVDEEKHRLIETRVAQVGAILLSVGFSVQIWGITTES*
Ga0134122_101835541	3300010400	Terrestrial Soil	MISYGRIFRSRKTIKKESETHHIENVYEAKHRLLETRIAQVGAVLLAIGFAMQIWGNLTEG*
Ga0150985_1000452411	3300012212	Avena Fatua Rhizosphere	RMSVNSIIIIGLGFNLIASVLIAYGRIFRSKRTIRKESETGESYNVHEEKHRLIETRIAQAGALLLVVGFTLQVIGNVFD*
Ga0150984_1090183712	3300012469	Avena Fatua Rhizosphere	SVNSIIIIGLGFNLIASVLIAYGRIFRSKRTIRKESETGESYNVHEEKHRLIETRIAQAGALLLVVGFTLQVIGNVFD*
Ga0157356_10035301	3300012474	Unplanted Soil	LIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLTDS*
Ga0157355_10093742	3300012493	Unplanted Soil	LIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNL
Ga0157347_10456971	3300012502	Arabidopsis Rhizosphere	LIASILIGYGRIFRSKKTIEKESQTRGEENIYKEKHRLLETRVAQLGAILLAIGFAVQIWGNLTDS*
Ga0157326_10213301	3300012513	Arabidopsis Rhizosphere	MLILSGLVLNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQIGAVLLAIGFAVQIWGNLADS*
Ga0157293_100072751	3300012898	Soil	IFRSKKTIKKESQTHYDENVYEEKHRLLETRIAQLGAALLAVGFAMQIWGNVIEG*
Ga0162651_1000316941	3300012938	Soil	MLAGLEINLIASILIGYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGEVLLAIGFAIQIWGNTVDS*
Ga0164300_104296042	3300012951	Soil	MLAGLVINLIASILISYGRIFRTKKTIEKESITEGHENFHEEKHRLIETRVAQVGAVLLAVGFAIQIWGTTVDS*
Ga0164300_104768651	3300012951	Soil	MLAGLLINLIASILISYGRIFRSRKTIEKESITDGHENIHEEKHRLIQTRVAQVGVVLLAIGFAIQIWGTTVDS*
Ga0164298_110159771	3300012955	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITEGHKNVPEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0164303_101115891	3300012957	Soil	MLAGLLINLIASILISYGRIFRSRKTIEKESITDGHENIHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0164303_101229411	3300012957	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITEGHENFHEEKHSLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0164299_101870852	3300012958	Soil	MISYGRIFRSKKTIKKESLTDGRENIDEEKHRLLETRIAQVGATLLSAGFAIQIWGNVADS*
Ga0164301_103085103	3300012960	Soil	LAGLLINLIASILISYGRIFRSRKTIEKESITDGHENIHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0164301_106739411	3300012960	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGHVNVHEEKHRLIETRIAQVGAALLAIGFAIQISGTTVD
Ga0164302_101102971	3300012961	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGHVNVHEEKHRLIETRIAQVGAVLLAIGEIWGTTVDS*
Ga0164302_102105261	3300012961	Soil	MLSGLLINLIASILISYGRIFRSRKTIEKESITDGHENIHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0164309_113140421	3300012984	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGHVNVHEEKHRLIETRIAQVGAVLLAIGFAIQISGTTVDS*
Ga0164308_104707141	3300012985	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITEGHENFHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0164304_109321481	3300012986	Soil	MLAGLVINLIASILISYGRIFRTKKTIEKESITEGHENFHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0164306_106810812	3300012988	Soil	SIMLAGLVINLIASILISYGRIFRSKKTIEKESITDGHENIHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS*
Ga0157377_100684943	3300014745	Miscanthus Rhizosphere	MIKIVALSGLIINLIASILIGYGRIFRSKKTIQRESQNNGRENMYEERRRLIETRVAQLGAVLLTLGFSIQIWGNISDS*
Ga0132258_105283442	3300015371	Arabidopsis Rhizosphere	MTKILILAGLTMNLIASIMISYGRIFRSKKTIEKESQTSGHENIHEEKHRLLETRIAQVGAVLLAIGFAVQIWGQLADE*
Ga0132258_106178455	3300015371	Arabidopsis Rhizosphere	MISYGRIFRSKKTIKKESLTVGYKNIHEEKHRLLETRIAQVGAVLLSAGFAIQIWGNMADD*
Ga0132258_109455914	3300015371	Arabidopsis Rhizosphere	ASIMISYGRIFRSKKTIRKESLTDGHENIHEEKHRLLETRIAQVGAVLLAAGFAIQIWGNLADG*
Ga0132258_113108851	3300015371	Arabidopsis Rhizosphere	LNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQIGAVLLAIGFAVQIWGNLADS*
Ga0132256_1000222626	3300015372	Arabidopsis Rhizosphere	MISYGRIFRSKKTIKKESLTDRHENIDEEKHRLLETRIAQVGAMLLSAGFAIQIWGNVADS*
Ga0132256_1032249551	3300015372	Arabidopsis Rhizosphere	ILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQIGAVLLAIGFAVQIWGNLADS*
Ga0132257_1030387291	3300015373	Arabidopsis Rhizosphere	ILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLTDS*
Ga0132257_1038946681	3300015373	Arabidopsis Rhizosphere	IFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQIGAVLLAIGFAVQIWGNLADS*
Ga0132255_1009349052	3300015374	Arabidopsis Rhizosphere	MISYGRIFRSKKTIKKESLTDRHENIDEEKHRLLETRIAQVGAMLLSAGFAIQIWGNVVDS*
Ga0184604_100088414	3300018000	Groundwater Sediment	VTNLIASILIGYGRIFRSKKTIEKESQTHYDKNIYEEKHRLIETRIAQVGAVLLAIGFAIQIWGNVTEG
Ga0184604_100888112	3300018000	Groundwater Sediment	GYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0184605_101520652	3300018027	Groundwater Sediment	MLAVLVINLIASILISYGRIFRSKKTIEKESMTEGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0184608_101363031	3300018028	Groundwater Sediment	MLAGLVINLIASILISYGRIFRSKKTIKKESITDGYENVHEEKHRLIETRVAQVGAVLLATGFAIQIWGTIVDS
Ga0184620_100232052	3300018051	Groundwater Sediment	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0184621_102090741	3300018054	Groundwater Sediment	MLAGLVINLIASILISYGRIFRSRKTIEKESITEGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQ
Ga0184619_104772361	3300018061	Groundwater Sediment	MLAGLVINLIASILISYGRIFRSKKTIKKESITDGYENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTIVDSXFEIHFVKIIPYL
Ga0184618_100527982	3300018071	Groundwater Sediment	MLAGLVINLIASILISYGRIFRSKKKIEKESITEGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0184609_100377562	3300018076	Groundwater Sediment	MLAGLVINLIASILIGYGRIFRSRKTNEKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0173481_105304421	3300019356	Soil	MISYGRIFRSKKTIKKESLTDGHENIHEEKHRLLETRIAQVGAVLLSAGFAIQIWGNVVD
Ga0193704_10302931	3300019867	Soil	MISYGRIFRSKKTIKKESLTDRHENIHEERHRLLETRIAQVGAVMLAAGFAVQIWGNLAD
Ga0193720_10568921	3300019868	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITEGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0193700_10145911	3300019873	Soil	MLAGLVINLIASILIGYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0193715_10301972	3300019878	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESMTEGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0193723_11977891	3300019879	Soil	MLAGLVINLIASILISYGRIFRSKKTIKKESITDGYENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTIVDS
Ga0193755_10994002	3300020004	Soil	MLAGLVINLVASILISYGRIFRSKKTIKKESITDGYENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTIVDS
Ga0193757_10112481	3300020008	Soil	MLAGLVINLIASILISYGRIFRSKKTIKKESITDGYENVHEQKHRLIETRVAQVGAVLLAIGFAIQIWGTIVDS
Ga0193732_10235461	3300020012	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITEGHENVHEEKHRLIETRVAQIGAVLLAIGFAIQIWGTTVDS
Ga0193734_10596752	3300020015	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITEGHENVHEEKHRLIETRVAQVGAVLLAIPRPCIYSSFL
Ga0210381_100439751	3300021078	Groundwater Sediment	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGF
Ga0210381_102491342	3300021078	Groundwater Sediment	IASILISYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0247790_101567841	3300022915	Soil	MAKTLMLIGLVINLIASILIGYGRIFRSKKTIKKESQTHYDENVYEEKHRLLETRIAQLGAALLAVGFAMQIWGNVIEG
Ga0247789_10694092	3300023266	Soil	MLIGLVINLIASILIGYGRIFRSKKTIKKESQTHYDENVYEEKHRLLETRIAQLGAALLAVGFAMQIWGNVIEG
Ga0207673_10311751	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	LTNILILSGLILNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS
Ga0207697_100110893	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS
Ga0207642_106290012	3300025899	Miscanthus Rhizosphere	NLIASIMISYGRIFRSRKTIKKESLTDGHENIHEEKHRLLETRIAQVGAMLLSTGFAIQIWGNVADS
Ga0207688_110277771	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MIKIVALSGLIINLIASILIGYGRIFRSKKTIQKESQNNGRENMYEERRRLIETRVAQLGAVLLTLGFSIQIWGNISDS
Ga0207670_113262531	3300025936	Switchgrass Rhizosphere	HFSGRTMIKIVALSGPIINLIASILIGYGRIFRSKKTIQKESQNNGRENMYEERRRLIETRVAQLGAVLLTLGFSIQIWGNISDS
Ga0207640_117611881	3300025981	Corn Rhizosphere	MLILSGLVLNLIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS
Ga0207674_102362974	3300026116	Corn Rhizosphere	MLIGLVINLIASILIGYGRIFRSKKTIKKESQTHYDENVYEEKHRLLETRIAQLGAALLAVGFAMQIWGNVTE
Ga0209470_11147572	3300026324	Soil	MNLVASILIGYGRIFRSKKTIEKESQTSGNENVYEERHRLIETRVAQIGAVLLAVGFAVQIWGNLTDS
Ga0207603_1060791	3300026820	Soil	MLAGLVINLIASILISYGRIFRTKKTIEKESQTRGEENIYEEKHRLLETRVAQLGAILLAIGFAVQIWGNLADS
Ga0209814_100143485	3300027873	Populus Rhizosphere	MNLIASVLIGYGRIFRSKKTIEKESQNRGEENVYEERHRLLETRVAQIGAVLLAIGFAVQIWGNLTDS
Ga0209382_1001355114	3300027909	Populus Rhizosphere	MNLIASVLIGYGRIFRSKKTIEKESQNRGEENVYEERHRLLETRVAQIGAVLLAIGIGFAVQIWGNLTDS
Ga0209382_106979181	3300027909	Populus Rhizosphere	MLLGYGRIFRSKKTIEKESRNEGPENVYEKKHRLIETRVAQAGAVLLSIGFAVQIYGVANDN
Ga0209382_120801881	3300027909	Populus Rhizosphere	MLILSGLIVNLIASILIGYGRIFRSKKTIMKESQTDGPKNVHEEKHRLLETRIAQIGAVLLAVGFAIQIWGNIVDG
Ga0307312_101907872	3300028828	Soil	MLAGLVFNLIASILISYGRIFRSKKTIEKESITEGHENVHEEKHRLIETRVAQVGAVLLAIGFAIQIWGTTVDS
Ga0308206_12056211	3300030903	Soil	MLAGLVINLIASILISYGRIFRSKKTIEKESITDGHENVHEEKHRLIETRVAQVGAVLLAVGFAIQIWGTAVDS
Ga0308204_100884162	3300031092	Soil	MNLIASVLIGYGRIFRSKKTIEKESQTRGDENVYEQRHRLIETRVAQIGAVLLAIGFAVQIWGNLTES
Ga0310886_107247351	3300031562	Soil	LVLNLVASILIGYGRIFRSKKAIQKESQTNGIENTYEEKRRLIETRVAQIGAGLLAIGFAVQIWGNLTES
Ga0310813_108426642	3300031716	Soil	LIASILIGYGRIFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQIGAVLLAIGFAVQIWGNLADS
Ga0310810_100233761	3300033412	Soil	IFRSKKTIEKESQTRGEENIYEEKHRLLETRVAQIGAVLLAIGFAVQIWGNLADS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039209

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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