Metagenome / Metatranscriptome Family F038063

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038063
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	58 residues
Representative Sequence	FYLGITRTEAFLMASSTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQSRFNLMLILVA
Number of Associated Samples	110
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.21 %
% of genes near scaffold ends (potentially truncated)	84.94 %
% of genes from short scaffolds (< 2000 bps)	98.80 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (77.108 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (54.217 % of family members)
Environment Ontology (ENVO)	Unclassified (84.337 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (70.482 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.30% β-sheet: 0.00% Coil/Unstructured: 40.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF02992	Transposase_21	0.60
PF13963	Transpos_assoc	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
All Organisms	root	All Organisms	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
cellular organisms	root	All Organisms → cellular organisms	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	22.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	6.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	6.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	6.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	6.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	6.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	6.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	4.82 %
Panicum sect. Panicum	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.11 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	4.82 %
Panicum hallii	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005330\|Ga0070690_101541606	Not Available	537	Open in IMG/M
3300005353\|Ga0070669_101132424	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	674	Open in IMG/M
3300005353\|Ga0070669_101433608	Not Available	599	Open in IMG/M
3300005441\|Ga0070700_101949210	Not Available	509	Open in IMG/M
3300005544\|Ga0070686_101904276	Not Available	507	Open in IMG/M
3300005617\|Ga0068859_100400536	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1468	Open in IMG/M
3300005617\|Ga0068859_101494663	Not Available	745	Open in IMG/M
3300005618\|Ga0068864_101515970	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	673	Open in IMG/M
3300005719\|Ga0068861_102118488	Not Available	562	Open in IMG/M
3300005841\|Ga0068863_100690007	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1014	Open in IMG/M
3300005841\|Ga0068863_102428869	Not Available	534	Open in IMG/M
3300005842\|Ga0068858_102459635	Not Available	515	Open in IMG/M
3300005843\|Ga0068860_101809139	Not Available	632	Open in IMG/M
3300005843\|Ga0068860_102009586	Not Available	599	Open in IMG/M
3300005843\|Ga0068860_102747742	Not Available	510	Open in IMG/M
3300009092\|Ga0105250_10353063	Not Available	644	Open in IMG/M
3300009177\|Ga0105248_13355120	Not Available	509	Open in IMG/M
3300009975\|Ga0105129_106312	Not Available	717	Open in IMG/M
3300009975\|Ga0105129_111437	Not Available	612	Open in IMG/M
3300009977\|Ga0105141_127146	Not Available	507	Open in IMG/M
3300009981\|Ga0105133_107768	Not Available	757	Open in IMG/M
3300009981\|Ga0105133_111602	Not Available	681	Open in IMG/M
3300009989\|Ga0105131_123374	Not Available	626	Open in IMG/M
3300009989\|Ga0105131_129328	Not Available	581	Open in IMG/M
3300009989\|Ga0105131_134406	Not Available	550	Open in IMG/M
3300009992\|Ga0105120_1014207	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	818	Open in IMG/M
3300009994\|Ga0105126_1015381	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	783	Open in IMG/M
3300009994\|Ga0105126_1028585	Not Available	646	Open in IMG/M
3300009994\|Ga0105126_1055101	Not Available	509	Open in IMG/M
3300010371\|Ga0134125_12325696	Not Available	583	Open in IMG/M
3300013306\|Ga0163162_10874320	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1013	Open in IMG/M
3300014326\|Ga0157380_11993412	Not Available	642	Open in IMG/M
3300015270\|Ga0182183_1081669	Not Available	529	Open in IMG/M
3300015270\|Ga0182183_1088851	Not Available	515	Open in IMG/M
3300015278\|Ga0182099_1066718	Not Available	518	Open in IMG/M
3300015280\|Ga0182100_1025274	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	790	Open in IMG/M
3300015280\|Ga0182100_1096763	Not Available	506	Open in IMG/M
3300015284\|Ga0182101_1032860	Not Available	728	Open in IMG/M
3300015290\|Ga0182105_1042129	Not Available	696	Open in IMG/M
3300015290\|Ga0182105_1107757	Not Available	501	Open in IMG/M
3300015297\|Ga0182104_1062488	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	637	Open in IMG/M
3300015309\|Ga0182098_1079234	Not Available	598	Open in IMG/M
3300015309\|Ga0182098_1111008	Not Available	530	Open in IMG/M
3300015309\|Ga0182098_1120172	Not Available	515	Open in IMG/M
3300015311\|Ga0182182_1051364	Not Available	685	Open in IMG/M
3300015311\|Ga0182182_1064229	Not Available	634	Open in IMG/M
3300015311\|Ga0182182_1106721	Not Available	529	Open in IMG/M
3300015312\|Ga0182168_1018410	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1009	Open in IMG/M
3300015318\|Ga0182181_1080362	Not Available	572	Open in IMG/M
3300015318\|Ga0182181_1086217	Not Available	558	Open in IMG/M
3300015324\|Ga0182134_1064088	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	693	Open in IMG/M
3300015324\|Ga0182134_1146879	Not Available	504	Open in IMG/M
3300015325\|Ga0182148_1111677	Not Available	559	Open in IMG/M
3300015325\|Ga0182148_1114701	Not Available	553	Open in IMG/M
3300015326\|Ga0182166_1093859	Not Available	595	Open in IMG/M
3300015327\|Ga0182114_1079303	Not Available	672	Open in IMG/M
3300015327\|Ga0182114_1079453	Not Available	672	Open in IMG/M
3300015328\|Ga0182153_1048197	Not Available	771	Open in IMG/M
3300015330\|Ga0182152_1062761	Not Available	713	Open in IMG/M
3300015330\|Ga0182152_1130131	Not Available	540	Open in IMG/M
3300015332\|Ga0182117_1020816	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1108	Open in IMG/M
3300015332\|Ga0182117_1159313	Not Available	517	Open in IMG/M
3300015332\|Ga0182117_1165590	Not Available	507	Open in IMG/M
3300015333\|Ga0182147_1140355	Not Available	545	Open in IMG/M
3300015335\|Ga0182116_1080804	Not Available	705	Open in IMG/M
3300015335\|Ga0182116_1126511	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	587	Open in IMG/M
3300015336\|Ga0182150_1044080	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	831	Open in IMG/M
3300015336\|Ga0182150_1092616	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	636	Open in IMG/M
3300015336\|Ga0182150_1147499	Not Available	528	Open in IMG/M
3300015338\|Ga0182137_1072112	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	736	Open in IMG/M
3300015338\|Ga0182137_1100630	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	645	Open in IMG/M
3300015348\|Ga0182115_1231340	Not Available	590	Open in IMG/M
3300015349\|Ga0182185_1193633	Not Available	614	Open in IMG/M
3300015350\|Ga0182163_1180936	Not Available	659	Open in IMG/M
3300015350\|Ga0182163_1267582	Not Available	535	Open in IMG/M
3300015350\|Ga0182163_1270741	Not Available	532	Open in IMG/M
3300015352\|Ga0182169_1216424	Not Available	625	Open in IMG/M
3300015352\|Ga0182169_1217506	Not Available	623	Open in IMG/M
3300015353\|Ga0182179_1165820	Not Available	694	Open in IMG/M
3300015353\|Ga0182179_1231067	Not Available	594	Open in IMG/M
3300015354\|Ga0182167_1256425	Not Available	629	Open in IMG/M
3300015354\|Ga0182167_1298361	Not Available	572	Open in IMG/M
3300017408\|Ga0182197_1078333	Not Available	647	Open in IMG/M
3300017408\|Ga0182197_1095409	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	600	Open in IMG/M
3300017408\|Ga0182197_1121113	Not Available	548	Open in IMG/M
3300017414\|Ga0182195_1047112	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	905	Open in IMG/M
3300017422\|Ga0182201_1145797	Not Available	501	Open in IMG/M
3300017432\|Ga0182196_1073005	Not Available	655	Open in IMG/M
3300017432\|Ga0182196_1138896	Not Available	524	Open in IMG/M
3300017440\|Ga0182214_1159526	Not Available	504	Open in IMG/M
3300017445\|Ga0182198_1173755	Not Available	535	Open in IMG/M
3300017447\|Ga0182215_1160800	Not Available	521	Open in IMG/M
3300017447\|Ga0182215_1167294	Not Available	512	Open in IMG/M
3300017691\|Ga0182212_1141857	Not Available	546	Open in IMG/M
3300017693\|Ga0182216_1124654	Not Available	636	Open in IMG/M
3300017693\|Ga0182216_1171007	Not Available	561	Open in IMG/M
3300017694\|Ga0182211_1117242	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	627	Open in IMG/M
3300017694\|Ga0182211_1173462	Not Available	515	Open in IMG/M
3300017792\|Ga0163161_10792899	Not Available	796	Open in IMG/M
3300017792\|Ga0163161_11856263	Not Available	536	Open in IMG/M
3300026088\|Ga0207641_10787703	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii	940	Open in IMG/M
3300026088\|Ga0207641_12619070	Not Available	502	Open in IMG/M
3300026873\|Ga0207620_1009495	Not Available	689	Open in IMG/M
3300028049\|Ga0268322_1038424	Not Available	576	Open in IMG/M
3300028049\|Ga0268322_1046640	Not Available	539	Open in IMG/M
3300028050\|Ga0268328_1035576	Not Available	648	Open in IMG/M
3300028051\|Ga0268344_1006514	Not Available	764	Open in IMG/M
3300028051\|Ga0268344_1008922	Not Available	697	Open in IMG/M
3300028053\|Ga0268346_1018963	Not Available	660	Open in IMG/M
3300028053\|Ga0268346_1033430	Not Available	553	Open in IMG/M
3300028056\|Ga0268330_1049199	Not Available	549	Open in IMG/M
3300028056\|Ga0268330_1057602	Not Available	518	Open in IMG/M
3300028057\|Ga0268352_1027307	Not Available	620	Open in IMG/M
3300028058\|Ga0268332_1028921	Not Available	721	Open in IMG/M
3300028061\|Ga0268314_1043994	Not Available	543	Open in IMG/M
3300028061\|Ga0268314_1048012	Not Available	526	Open in IMG/M
3300028061\|Ga0268314_1051907	Not Available	510	Open in IMG/M
3300028062\|Ga0268342_1025058	Not Available	613	Open in IMG/M
3300028064\|Ga0268340_1035134	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	696	Open in IMG/M
3300028064\|Ga0268340_1075615	Not Available	529	Open in IMG/M
3300028139\|Ga0268355_1008934	Not Available	636	Open in IMG/M
3300028143\|Ga0268348_1005631	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	804	Open in IMG/M
3300028149\|Ga0268353_108129	Not Available	742	Open in IMG/M
3300028152\|Ga0268336_1018518	Not Available	591	Open in IMG/M
3300028153\|Ga0268320_1028341	Not Available	513	Open in IMG/M
3300028154\|Ga0268341_1015091	Not Available	634	Open in IMG/M
3300028154\|Ga0268341_1029201	Not Available	518	Open in IMG/M
3300028246\|Ga0268351_1016815	Not Available	726	Open in IMG/M
3300028251\|Ga0268324_1010566	Not Available	664	Open in IMG/M
3300028253\|Ga0268316_1021112	Not Available	530	Open in IMG/M
3300028381\|Ga0268264_10959546	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	860	Open in IMG/M
3300028464\|Ga0268302_107362	Not Available	537	Open in IMG/M
3300028468\|Ga0268317_1002211	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	844	Open in IMG/M
3300028469\|Ga0268337_1008558	Not Available	644	Open in IMG/M
3300028471\|Ga0268323_1005855	Not Available	737	Open in IMG/M
3300028472\|Ga0268315_1014758	Not Available	613	Open in IMG/M
3300028473\|Ga0268319_1009617	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	668	Open in IMG/M
3300028473\|Ga0268319_1009762	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	665	Open in IMG/M
3300028473\|Ga0268319_1023133	Not Available	512	Open in IMG/M
3300028476\|Ga0268329_1024529	Not Available	534	Open in IMG/M
3300028476\|Ga0268329_1026164	Not Available	523	Open in IMG/M
3300028527\|Ga0268335_1018326	Not Available	508	Open in IMG/M
3300032466\|Ga0214503_1192894	Not Available	635	Open in IMG/M
3300032469\|Ga0214491_1097923	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	705	Open in IMG/M
3300032469\|Ga0214491_1157278	Not Available	527	Open in IMG/M
3300032490\|Ga0214495_1089362	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	714	Open in IMG/M
3300032502\|Ga0214490_1064472	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	837	Open in IMG/M
3300032590\|Ga0214489_1069273	Not Available	520	Open in IMG/M
3300032593\|Ga0321338_1263710	Not Available	619	Open in IMG/M
3300032593\|Ga0321338_1341653	Not Available	536	Open in IMG/M
3300032689\|Ga0214497_1010321	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1724	Open in IMG/M
3300032699\|Ga0214494_1031260	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1006	Open in IMG/M
3300032699\|Ga0214494_1039931	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	899	Open in IMG/M
3300032758\|Ga0314746_1001357	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	3174	Open in IMG/M
3300032792\|Ga0314744_1060243	Not Available	739	Open in IMG/M
3300032821\|Ga0314719_1031835	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	657	Open in IMG/M
3300032824\|Ga0314735_1062273	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	706	Open in IMG/M
3300032843\|Ga0314736_1050690	Not Available	531	Open in IMG/M
3300032916\|Ga0314734_1106267	Not Available	549	Open in IMG/M
3300032934\|Ga0314741_1101148	Not Available	665	Open in IMG/M
3300032959\|Ga0314738_1093882	Not Available	523	Open in IMG/M
3300032966\|Ga0314722_1076844	Not Available	510	Open in IMG/M
3300032970\|Ga0314716_142641	Not Available	512	Open in IMG/M
3300033530\|Ga0314760_1048218	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1051	Open in IMG/M
3300033539\|Ga0314762_1029391	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1033	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	96.99%
Environmental	Environmental	3.01%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	96.99%
Terrestrial	Environmental → Terrestrial	3.01%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	77.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.64%
Unclassified	Host-Associated → Plants → Unclassified	7.23%
Soil	Environmental → Terrestrial → Soil	3.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	77.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.64%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	7.23%
Loam	Environmental → Terrestrial → Soil → Loam	1.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.20%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	77.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.64%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	7.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.60%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	54.22%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	22.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.83%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	7.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009975	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaG	Host-Associated	Open in IMG/M
3300009977	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_91 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017691	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026873	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-12 (SPAdes)	Environmental	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028051	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028057	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028062	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028139	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028149	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028152	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028153	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028154	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028246	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028251	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028253	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028464	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028468	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028469	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028471	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028473	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028476	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028527	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300032466	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032469	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032490	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032502	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032590	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_31MAY2016_LR3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032593	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032699	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032758	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032792	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032821	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032824	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032843	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032916	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032934	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032959	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032966	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032970	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033530	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033539	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070690_1015416061	3300005330	Switchgrass Rhizosphere	MASNASYPDVRSMTFSRSIMLWLFIIYEYHVVSVQSRFNLMLILVA*
Ga0070669_1011324242	3300005353	Switchgrass Rhizosphere	TEAFLMASNASYPDVRSMAFSRFIVPLLIIYEYHVVSVPSRFDLMLVLVA*
Ga0070669_1014336081	3300005353	Switchgrass Rhizosphere	MASSTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQPRFNLMLILVA*
Ga0070700_1019492101	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SGQHCSCFYLGITRTEAFLMASNASYPDVRSMAFSRFIVLSLHTIYEYHVVSVQSRFNLMIILVA*
Ga0070686_1019042761	3300005544	Switchgrass Rhizosphere	MASSTSYLDVRSMSFSRFIMLSLLIIYEYHVVSVQSRFNLMLVLV
Ga0068859_1004005361	3300005617	Switchgrass Rhizosphere	ITRTEAFLMASNASYPDVRSMVFSRFIVLSLLIIYEYHVVSVQSRFNLMLVLVT*
Ga0068859_1014946632	3300005617	Switchgrass Rhizosphere	MASSTSYLDVRSMAFSRFIMLLSLTIYEYHVVSVQSRFNLMLILIA*
Ga0068864_1015159701	3300005618	Switchgrass Rhizosphere	EAFLMASNTSYLDVRSMTFSRFIVLSLLIIYEYHVVSVQSCFNLMLILVA*
Ga0068861_1021184881	3300005719	Switchgrass Rhizosphere	MTSNASYPDVHSMVFSRFIVLLLLTIYEYHVVSVQSRFNLMLILVA*
Ga0068863_1006900071	3300005841	Switchgrass Rhizosphere	HAALIVFLRSGQHCSCLYLGITRTEAFLMASSASYLDVRSMIFSRSIMFLLFTIYEYHVIYVFMLDLKLVLIVED*
Ga0068863_1024288693	3300005841	Switchgrass Rhizosphere	RSGQRCSYFYLGITRTEAFLMASSTSYLDIRGIAFSRSIMLLLPIVYDYHVVFAQSCFHLILALIA*
Ga0068858_1024596352	3300005842	Switchgrass Rhizosphere	RCSYFYLGITRTEAFLMASNASYPDVRSMVFSRFIVLLLLIIYEYHVVSVQSRFNLMLILVA*
Ga0068860_1018091392	3300005843	Switchgrass Rhizosphere	FYLGITRTEAFLMASSTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQSRFNLMLILVA*
Ga0068860_1020095861	3300005843	Switchgrass Rhizosphere	YLGITRTEAFFMASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKD*
Ga0068860_1027477421	3300005843	Switchgrass Rhizosphere	GQCCSCFYLGITRTEAFFMASNASYPDVRSMAFSRSIVLLLLIVYEYHVVFTRSCHHLILALVA*
Ga0105250_103530631	3300009092	Switchgrass Rhizosphere	MASNASYPDVRSMAFSRFIVLSLPTIYEYHVVSVQSRFNLMLIFVA*
Ga0105248_133551201	3300009177	Switchgrass Rhizosphere	CCPNHFLRSGQHCSCFYLGITRTEAFLMASSASYPDIRSMAFSISIMLLLLIIYEYHVVSVQSRFNLMLILVA*
Ga0105129_1063121	3300009975	Switchgrass Associated	MVSSTSYLDVRGMAFSRFIMVLLLAIYEYHVVSVQSRFNLMLILVA*
Ga0105129_1114371	3300009975	Switchgrass Associated	LFLLYLGITRAEAFLMASNTSYLDVRSMAFSRFIVLLLLIIYEYHVVSVQPRFNLMLILVV*
Ga0105141_1271461	3300009977	Switchgrass Associated	TSYLDVRSMSFSRFIMLSLLIIYEYHVVSVLPRFNLMLVLVA*
Ga0105133_1077681	3300009981	Switchgrass Associated	CCPDRFSRSGHRCSCFYLGITYTEAFFMASNTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQPHFNLMLILVA*
Ga0105133_1116021	3300009981	Switchgrass Associated	MASNASYPDVRSMAFSRSIVLLLLTIYEYHVVSVQSRFNLMLILVA*
Ga0105131_1233741	3300009989	Switchgrass Associated	AFLMASNASYPDVRSMAFSRFIVLLLLTIYEYHVVSVQSRFNLMLILVA*
Ga0105131_1293281	3300009989	Switchgrass Associated	DRFLRSGQRCSCFYLGITRTEAFFMASNASYPDIRSMIFSGFIVLLLLIIYEYHVIST*
Ga0105131_1344061	3300009989	Switchgrass Associated	MTRTEAFFMASSTSYLDVRSMAFSRFIMLLFLTIYEYHVVSVQPHFNLILILVA*
Ga0105120_10142072	3300009992	Switchgrass Associated	QYCSCFYLGITRTEAFLMASSASYLDIRSKAFSRSITLSLLIFYEYHVVFVQSCYHLVLALDA*
Ga0105126_10153811	3300009994	Switchgrass Associated	HCSWFYLGITRTKEFLMASSASFSDVRSMNFSRFIMLLLFIIYEYHVVSVQSRFNLMLILVA*
Ga0105126_10285851	3300009994	Switchgrass Associated	RSGQRCSYFYLGITRTEAFLMASNASYPDIRSMIFSRFIVLLLLIIYEYHVISARSCFNLMLILVA*
Ga0105126_10551011	3300009994	Switchgrass Associated	MASNASYPDVRSMAFSRFIVLLLLISYEYHVVSVQPHFNLMLILVA*
Ga0134125_123256961	3300010371	Terrestrial Soil	FYLGITRTEAFLMASSTSYLDVRSMSFSRFIMLSLLIVYEYHVIFTRSCLSLKLALVA*
Ga0163162_108743201	3300013306	Switchgrass Rhizosphere	MASNASYPEVRSMNFSRSIMLLLLTIYEYHVVSVQSRSNL
Ga0157380_119934121	3300014326	Switchgrass Rhizosphere	MASNASYPDVRSMVFSRFIVLSLLIVYEYHVVAVQSRFNLMLVLVA*
Ga0182183_10816691	3300015270	Switchgrass Phyllosphere	ITRTEAFFMASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCLDLKLTLVAKD*
Ga0182183_10888511	3300015270	Switchgrass Phyllosphere	RFLRSGQRCSCFYLGITRTEAFLMASNASYPDVRSMAFSRSVVLLLLIVYEYHVVFTRSCYHLVLALVA*
Ga0182099_10667181	3300015278	Switchgrass Phyllosphere	VFLLASSASYPDVRSMVSSRSIMLWLFIIYEYHVVSAQSRFNLMLILVA*
Ga0182100_10252741	3300015280	Switchgrass Phyllosphere	SCFYLGITRTEAFLMASSTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQSRFNLMLILVA
Ga0182100_10967632	3300015280	Switchgrass Phyllosphere	MASNASYLGVRSMAFSRFIVLSLHTIYEYHVVSVQSRFNLMLILVA*
Ga0182101_10328601	3300015284	Switchgrass Phyllosphere	GQHCSYLYLGIIRTEAFFMASSASYLDVRSMIFSRSIMFLLFTIYEYHVFLYAFTLDLKLILVAEG*
Ga0182105_10421291	3300015290	Switchgrass Phyllosphere	RSLRSGQHCSCFYLGITRTEAFLMASSASYLDVRSMIFSRSIMLLLFTIYEYHVVSVQPRFNLMLILVV*
Ga0182105_11077571	3300015290	Switchgrass Phyllosphere	SGQYCSCYYLGITRTEAFLMASNASYLDVRSRAFSRSIMLSLLIFYEYHIVFARLCYHLILALVA*
Ga0182104_10624881	3300015297	Switchgrass Phyllosphere	SYPDVRSMAFSRFIVLLLLTIYEYHVVSVQPRFNLMLILFA*
Ga0182098_10792341	3300015309	Switchgrass Phyllosphere	PCCPNRFLRSGQRCSCFYIGITRTEPFFMASSTSYLDVRSMAFSRFIMLFLLTIYEYHVVSMQSRFNLMLILVA*
Ga0182098_11110081	3300015309	Switchgrass Phyllosphere	AFLMASSASYPDVRSMVFSRFIVLLLPIIYEYHVVSVQSRFNIILILVAYS*
Ga0182098_11201721	3300015309	Switchgrass Phyllosphere	ITRTEAFLMVSNASYPDVRSMAFSRSVVLLLLIVYEYQVVFTRSCYHLILALVA*
Ga0182182_10513641	3300015311	Switchgrass Phyllosphere	CSCFYLGITRTEAFLMASNASYLDVRSMDFSRSIVLSSLIIYEYHVVSVQSRFNLMLVLVA*
Ga0182182_10642291	3300015311	Switchgrass Phyllosphere	VRSRQHYFCFYLGITRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA*
Ga0182182_11067211	3300015311	Switchgrass Phyllosphere	FYLGITRTEAFFMASSASYPDFRSMIFSRSIVLLLLIIYEYHVVSVQSRFNLILILVA*
Ga0182168_10184101	3300015312	Switchgrass Phyllosphere	LDHLVRSRQHCFCFYLGITRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA*
Ga0182181_10803621	3300015318	Switchgrass Phyllosphere	CSCFYFGITRTEAFLMVSSTSYLDVRSKAFSRSIMLSLLIFYEYHIVFARLCYHLILALVA*
Ga0182181_10862171	3300015318	Switchgrass Phyllosphere	MTSNASYPDVHSMVFSRFIVLSLLIIYEYHVVSVQSRLNLMLVLVT*
Ga0182134_10640881	3300015324	Switchgrass Phyllosphere	ITRTEVFLMASNTSYPDVRSMGFSRSVVLLLLIVYEYHVVFTRSYHHLILALVA*
Ga0182134_11468791	3300015324	Switchgrass Phyllosphere	YLGITRTEAFLMASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKS*
Ga0182148_11116771	3300015325	Switchgrass Phyllosphere	MTRTEAFFMASNTSYPDVRSMAFSRFIVLLLLIIYEYHVVSVQSRFNLMLILVA*
Ga0182148_11147011	3300015325	Switchgrass Phyllosphere	CPDRFLRSGQRCSYFYLGITRTETFFMATNASYLGVRSMAFSRFIVLSLHTIYEYLVVSVQSRFNLMLILVA*
Ga0182166_10938592	3300015326	Switchgrass Phyllosphere	MASNTSYLDVRSMTFSRFIVLSLLIIYEYLVVSVQSCFNLMLILVA*
Ga0182114_10793032	3300015327	Switchgrass Phyllosphere	MASNASYPDVRSMVFSRFIVLSLLIIYEYHVVSVQSRFNLMLVLVT*
Ga0182114_10794531	3300015327	Switchgrass Phyllosphere	ITRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA*
Ga0182153_10481971	3300015328	Switchgrass Phyllosphere	CSDRFLQSEQYFSCLYLSITRTEMFFMASNASYLDVCSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKS*
Ga0182152_10627611	3300015330	Switchgrass Phyllosphere	AALIAFRDRFSRSGQRCSCFYLGTTRIEAFFMASNANYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKD*
Ga0182152_11301311	3300015330	Switchgrass Phyllosphere	SSASYLDVRSRAFSRSIMLSSLIYYEYHVVFARSCHHLTLALVA*
Ga0182117_10208161	3300015332	Switchgrass Phyllosphere	RLVRSRQHCFCFYLGITRTEVFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA*
Ga0182117_11593131	3300015332	Switchgrass Phyllosphere	CPDRFSRSGQRCSCFYLGITRTEAFFMASNASYPDIRSMAFSRSIMLLLLIVYEYHVVFTRSCHHLILALVA*
Ga0182117_11655901	3300015332	Switchgrass Phyllosphere	CSCFYLGITRTEAFLMASNTSYPDVRSMGFSRSVVLLLLIVYEYHVVFTRSYHHLILALVA*
Ga0182147_11403551	3300015333	Switchgrass Phyllosphere	YLGITRTEAFFMASSASYPDFHSMTFSRSIMIWLFIIYKYHVVSVQSCFNLMLILVA*
Ga0182116_10808041	3300015335	Switchgrass Phyllosphere	MASNASYFDVRIMAFSRSIVLLLLIIYEYHVVSVQSRFNLMLILVA*
Ga0182116_11265111	3300015335	Switchgrass Phyllosphere	NASYPDVRSMVFSRFIVLSLLIIYEYHVVSVQSCFNLMLVLVT*
Ga0182150_10440801	3300015336	Switchgrass Phyllosphere	YLGITHTEAFLMASSTSYLDVRSMIFCRSIMLPLLIVYEYHVVFTRSCFILH*
Ga0182150_10926161	3300015336	Switchgrass Phyllosphere	RTEAFLMASNASYPDVRSMAFSRSVVLLLLIVYEYHVVFTRSCHQLILALVA*
Ga0182150_11474991	3300015336	Switchgrass Phyllosphere	GITRTEAFLMASSTSYHDVRSMAFSRSIVLMLLIICEYHVISVQSCLNLMLILAA*
Ga0182137_10721121	3300015338	Switchgrass Phyllosphere	FYLGITCTEAFFMASSASYPDVRSKAFSRSIMLSSLIYYEHHVVFARSCHHLTLALVA*
Ga0182137_11006301	3300015338	Switchgrass Phyllosphere	LMASSTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQPRFNLMIILVA*
Ga0182133_10888991	3300015340	Switchgrass Phyllosphere	TRTEAFLMASNASYLDVRSMIFSRSIMLPLLIVYEYHVVFTRSCFILH*
Ga0182115_12313401	3300015348	Switchgrass Phyllosphere	LRSGQHCSCFYLGITRTEAFLMASSASYPDVRSMAFSRFIVLLLLTIYEYHVVSVQPRFNLMLILVA*
Ga0182185_11936331	3300015349	Switchgrass Phyllosphere	TRTEAFLMASNASYLDVRSRAFSRSIMLSLLIFYEYHIVFARLCYHLILALVA*
Ga0182163_11809361	3300015350	Switchgrass Phyllosphere	SGQRCSCFYLGITRTEAFFMANNTSYPDVRSMGFSRSVVLLLLIVYEYHVVFTRSYHHLILALVAKS*
Ga0182163_12675821	3300015350	Switchgrass Phyllosphere	RSGQHCSYFYLGITRTEAFLMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA*
Ga0182163_12707411	3300015350	Switchgrass Phyllosphere	LGITRTEAFLMASSTSYLGVRSMTFSRFIMLSLLIVYEYHVIFMRSCFHLKLALVA*
Ga0182169_12164241	3300015352	Switchgrass Phyllosphere	YLGITRTEAFFMASSASYPDVRSMAFSISIMLWLFIIYEYHVVFAQSRFDLMIILVA*
Ga0182169_12175061	3300015352	Switchgrass Phyllosphere	PDVHSMAFSRFIVLSLLTIYKYNVVSVQSCSNLMLILVA*
Ga0182179_11658202	3300015353	Switchgrass Phyllosphere	MASSTSYPDVCSMAFSRFIVLLLLTIYEYHVVSVQPRFNLMQIL
Ga0182179_12310671	3300015353	Switchgrass Phyllosphere	LYLGITRTEAFFMASNASYLDVRSMIFSRSIMFLLFTIYEYHVFLYAFTLDLKLILVAEG
Ga0182167_12564251	3300015354	Switchgrass Phyllosphere	THTEVFSMASSTSYLDLRSMAFSRFITLLLLTIYEYHVSSVQSRFNLMLILVA*
Ga0182167_12983611	3300015354	Switchgrass Phyllosphere	FLRSGQYCSCFYLGITRTEAFLMASNASYPDVRSMVFSRFIVLSLLIIYEYHVVSVQSRFNLMLVLVT*
Ga0182197_10783331	3300017408	Switchgrass Phyllosphere	CLDRFVRSRQHCFCFYLGITHTEVFFMASSTSYLDICGIAFSRSIMLLLPIVYEYYVVFAQSCFHLILALIA
Ga0182197_10954091	3300017408	Switchgrass Phyllosphere	FFMASNASYPDVRSMAFSRSIVLLLLIIYEYHIVFTRSCYHLILALVV
Ga0182197_11211131	3300017408	Switchgrass Phyllosphere	PDRLLRSGQRCSCFYLGITRTEAFLMASSASYPNVRSMAFSRFIVLLLLTIYEYHVVFVQPRFNLMLILVA
Ga0182195_10471121	3300017414	Switchgrass Phyllosphere	SCFYLGITRTEAFLMASNASYLDVRSMIFSRSIMFLLFTIYEYHVFLYAFTLDLKLILVAEG
Ga0182201_11457971	3300017422	Switchgrass Phyllosphere	SCFYLGITRAEMFLMASSTSYLDIRGIAFSRSITLSLLIVHVYHVVFTRSCHHLKLALVA
Ga0182196_10730052	3300017432	Switchgrass Phyllosphere	MASNASYLDVRSMTFSRFIMLLLFIYEYHVFSMRSCFDLKLILV
Ga0182196_11388962	3300017432	Switchgrass Phyllosphere	FYLGVTRTEAFLMASNTSYPNVRSMAFSRFIVLLFLIIYEYHVIYVQSRFNLMLILVA
Ga0182214_11595261	3300017440	Switchgrass Phyllosphere	DRFLRSGQHCSCFYLGITRTEAFFMASSTSYLDVRSMSFSRFIMLSLLIVYEYHVIFTRSCLNLKLALVA
Ga0182198_11737551	3300017445	Switchgrass Phyllosphere	CSCFYLGITRTEAFLMASNASYPDVRSMAFSRSIVLLLLIIYEYHVVSVQSRFNLMLILV
Ga0182215_11608001	3300017447	Switchgrass Phyllosphere	ASSTIYPDVRSMAFSRFIVLLLFTMYEYHVVSMQPRFNLILILVA
Ga0182215_11672941	3300017447	Switchgrass Phyllosphere	LGITRTEAFFMASNASYPDVRSMAFSRFIVLSLSIIYEYHVVSVQSRFNLMLILVA
Ga0182212_11418571	3300017691	Switchgrass Phyllosphere	DRFLRSGQCSSCFYLGITRIEVFLMASSTSYPNVRSMAFSRFIVLLLPTIYEYHVVSVQSCFNLMLILVA
Ga0182216_11246541	3300017693	Switchgrass Phyllosphere	SGQHCSCLYLGITRTEAFFMVSNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKS
Ga0182216_11710071	3300017693	Switchgrass Phyllosphere	MTRTEAFFMASSTSYLDVRSMAFSRFIVLLLLTTYEYHVVSVQPRFDLMLIIIA
Ga0182211_11172421	3300017694	Switchgrass Phyllosphere	LGITRTEAFLMASNASYPDVRSMAFSRFIVLSLPTIYEYHVVSVQSRFNLMLILVA
Ga0182211_11734621	3300017694	Switchgrass Phyllosphere	FLMVSNASYPDVRSMAFSRSIVLSLLIIYEYHVISVQSCFNLILILVA
Ga0163161_107928992	3300017792	Switchgrass Rhizosphere	MASSASYLDVRSMIFSRSIMFLLFTIYEYHVFLYAFTLDLKLILVSEG
Ga0163161_118562631	3300017792	Switchgrass Rhizosphere	EAFLMACSSSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQPRFNLMLILVA
Ga0207641_107877031	3300026088	Switchgrass Rhizosphere	MASNDSYPDVRSMVFSRFIVLSLLIIYEYHVVSVQSRFNLMLVLVT
Ga0207641_126190702	3300026088	Switchgrass Rhizosphere	MASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKD
Ga0207620_10094951	3300026873	Soil	MASNASYLDVRSMAFSRFIVLLLPTIYEYHVVSVQSHFNLML
Ga0268322_10384241	3300028049	Phyllosphere	LRSGQYCSCLYLGITRTEAFFMASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKD
Ga0268322_10466401	3300028049	Phyllosphere	GQHCSCFYLGITRTEAFFMASNTSYPDVRSMGFSRSVVLLLLIVYEYHVVFTRSYHHLILALVA
Ga0268328_10355761	3300028050	Phyllosphere	FLRSGQHCSCLYFSITRTEAFLMASSTSYLDVRSMAFSRSIMLLLLIIYEYHVVSVHSRFNLMLILVA
Ga0268344_10065141	3300028051	Phyllosphere	RSGQHCSCFYLCITRTEAFLMASNASYLDVRSMIFSRSIMFLLFTIYEYHVFLYAFTLDLKLILVAEG
Ga0268344_10089221	3300028051	Phyllosphere	SGHRCSCFYLGITHTEAFLMASSASYPDFCSMTFSRSTMLWLFIIYEYHVVSVQSRFNLMLILVA
Ga0268346_10189631	3300028053	Phyllosphere	RSWQHCFCFYLGITRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA
Ga0268346_10334301	3300028053	Phyllosphere	CSCFYLGITRTEAFFMASSTSYLDVRSMAFSRFIMLLSFTIHEYHVVSVQSCSNLMLILV
Ga0268330_10491991	3300028056	Phyllosphere	QCCSCFYLGITRTEAFFMASNASYPDVRSMAFSRSVVLLLLIVYEYHVVFTRSCYHLILALVA
Ga0268330_10576021	3300028056	Phyllosphere	FLRSGQHCSCFYLGITRTEAFLMASSTSYLDVRSMSFSRFIMLSLLIVYEYHVIFTRSCLNLKLALVA
Ga0268352_10273071	3300028057	Phyllosphere	ITRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA
Ga0268332_10289211	3300028058	Phyllosphere	CPDRFSRSGQCCSCFYLGITRTEAFLMASSTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQSRFNLMLILVA
Ga0268314_10439941	3300028061	Phyllosphere	LVRSRQHYFCFYLGITRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA
Ga0268314_10480121	3300028061	Phyllosphere	TEAFLMASSTSYPDVRSMAFSRFIVLLLLTIYEYHVVSVQPRFNLMQILVA
Ga0268314_10519071	3300028061	Phyllosphere	SGQRCSCFYLGITRTEAFLMASNASYLDVRSMAFSRSIVLSLLIIYEYHVVFTRSCHHLILALVA
Ga0268342_10250581	3300028062	Phyllosphere	LRLGQRCSYFYLGITRTEAFLMVSSTSYLDIRGIAFSRSIMLLLPIVYEYHVVFAQSCFHLILALIA
Ga0268340_10351341	3300028064	Phyllosphere	RSMAFSRFIVLSLIIIYEYHVVSVQSRFNLMLVLVA
Ga0268340_10756151	3300028064	Phyllosphere	ALIIFLRSGQHCSCLYLGITRTEAFFMVSNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKS
Ga0268355_10089341	3300028139	Phyllosphere	LLRSGQRCSCFYLGITRTEAFLMASNASYFDVRSMAFSRSIVLLLLIIYEYHVISVQVTF
Ga0268348_10056311	3300028143	Phyllosphere	CFYLGITRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA
Ga0268353_1081291	3300028149	Phyllosphere	PDRFLRSGQCCSCFYLGITRTEAFFMASSASYPDVCSMVFSRFIVLLLPIIYEYHVVSVQSRFNLMLILVA
Ga0268336_10185181	3300028152	Phyllosphere	RFLRSGQRCSCFYLSITRTKAFLMASSASYPDVRSMVFSRFIVLLLPIIYEYHVVSVQSRFNIILILVAYS
Ga0268320_10283411	3300028153	Phyllosphere	LRSGQRCSCFYLGITRTEAFLMASSTSYPDVRSMNFSRFIVLLLLTIYEYHVISVQSRFNLMLILVA
Ga0268341_10150911	3300028154	Phyllosphere	SNASYLNVRSMIFSRSIMFLLFTIYEYHVFLYAFTLDLKLILVAEG
Ga0268341_10292011	3300028154	Phyllosphere	GQRCSCFYLGITRTEAFFMASSTSYPDVRSMAFSRFIVLLLLTIYEYHVVSVQSHFNLMLILVA
Ga0268351_10168152	3300028246	Phyllosphere	MTNNASYLGVRSMAFSRFIVLSLHTIYEYHVVSVQPRFNLMLVHVT
Ga0268324_10105661	3300028251	Phyllosphere	TRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA
Ga0268316_10211121	3300028253	Phyllosphere	LLVLKRFLMASSTSYLDVRSMAFSRFIMLLLLIIYEYHVVSVHSRFNLMLILVA
Ga0268264_109595461	3300028381	Switchgrass Rhizosphere	SCFYLGITRTEAFLMASSASYPDVRSMVFSRFIVLLLLTIYEYHVVSVQSRFNLMLILVA
Ga0268302_1073621	3300028464	Phyllosphere	GQYCSCFYLGITRTEAFLMASNASYPDVRSMVFSRFIVLSLLIIYEYHVVSVQSRFNLMLVLVT
Ga0268317_10022111	3300028468	Phyllosphere	KRHAALIVFLLSGQHCSCLYLGITRTEAFLMASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKS
Ga0268337_10085581	3300028469	Phyllosphere	RSGQCCSCFYLGITRTEAFFMASSASYPDVRSMAFSISIMLWLFIIYEYHVVFAQSRFDLMIILVA
Ga0268323_10058551	3300028471	Phyllosphere	FYLGITRTEAFFMASSTSYLDVRSIAFSRSIVLPLLIIYEYHVVFTRSCHYLILALVA
Ga0268315_10147581	3300028472	Phyllosphere	RTEAFLMASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKS
Ga0268319_10096171	3300028473	Phyllosphere	QRCSCFYLGITRTEAFLMASNASYLDVSIYCASLLIIYEYHVISVQSRFNLMLVLVA
Ga0268319_10097621	3300028473	Phyllosphere	TRTEAFLMASSTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQPRFNLMLILVA
Ga0268319_10231331	3300028473	Phyllosphere	ITRTEAFLMASSTSYLDIRGIAFSRSIMLLLPIVYEYHVVFAQSCFHLILALIA
Ga0268329_10245291	3300028476	Phyllosphere	RFLRLGQRCSCFYLGITRTEAFFMASNASYLGVRSMAFSRFIVLSLHTIYEYHVVSVQPRFNLMLVLVA
Ga0268329_10261641	3300028476	Phyllosphere	MASNASYPDVRSMTFSRSIMLWLFIIYEYHVVSVQSCFNLML
Ga0268335_10183261	3300028527	Phyllosphere	FYLGITRTEAFFMASNASYPDVRSMVFSRFIVLSLLIIYEYHVVSVQSRFNLMLVLVT
Ga0214503_11928941	3300032466	Switchgrass Phyllosphere	APCCPDGFSRSGQHCSCFYLGISRTEAFLMASSTSYLNVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLVLVA
Ga0214491_10979231	3300032469	Switchgrass Phyllosphere	SCLYLGITRTEAFLMASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKD
Ga0214491_11572781	3300032469	Switchgrass Phyllosphere	LGITRTEAFLMASSASYHDVRSMAFSRYVVLLLLIVYEYHVVFTRSCYHLILALVAQS
Ga0214495_10893621	3300032490	Switchgrass Phyllosphere	ITRTEAFLMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0214490_10644721	3300032502	Switchgrass Phyllosphere	FYLGITRTEAFLMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0214489_10692732	3300032590	Switchgrass Phyllosphere	EAFLMASSTSYLNVRSMSFSRFIMLLLLIIYEYHVVSVQSRFNLMLVLVA
Ga0321338_12637101	3300032593	Switchgrass Phyllosphere	LGITCTEVFFMASSASYPDVRSKAFSRSIMLSSLIYYEHHVVFARSCHHLTLALVA
Ga0321338_13416531	3300032593	Switchgrass Phyllosphere	FLRSGQRCSCFYLGITRTEAFFMASNASYPDVRSMAFSRFIVLSLPTIYEYHVVSVQSRFNLMLILVA
Ga0214497_10103211	3300032689	Switchgrass Phyllosphere	LGITRTEAFLMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0214494_10312602	3300032699	Switchgrass Phyllosphere	MASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0214494_10399312	3300032699	Switchgrass Phyllosphere	MAGNASYTDVRSMAFSRSVVLLLLIVYEYHVVFTRSCYHLILALVAQS
Ga0314746_10013571	3300032758	Switchgrass Phyllosphere	GQRCSCFYLSITRTEAFFMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0314744_10602431	3300032792	Switchgrass Phyllosphere	LGITRTEAFLMASSASYPDFRIMIFSRFIMLLLLIIYEHHVISTRSCFNLILILVAWN
Ga0314719_10318351	3300032821	Switchgrass Phyllosphere	GQRCSYFYLSITRTEAFLMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0314735_10622731	3300032824	Switchgrass Phyllosphere	TEAFFMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0314736_10506901	3300032843	Switchgrass Phyllosphere	RTEAFLMASNASYLDVRSMIFSRSIMLLLFTIYEYHVFSMRSCFDLKLILVAKD
Ga0314734_11062671	3300032916	Switchgrass Phyllosphere	CFYLGITRTEAFLMASSTSYLDVRSMAFSRFIMLLLLTIYEYHVVSVQSRFNLMLILVA
Ga0314741_11011481	3300032934	Switchgrass Phyllosphere	LDVRSMAFSRFIMLSLLTIYEYHVISVQPRFNLMLILVA
Ga0314738_10938821	3300032959	Switchgrass Phyllosphere	RITRTEAFLMASSTSYLDVRSMAFNSFIILLLLIIYEYHVVSVQSRFNLMLVLVA
Ga0314722_10768441	3300032966	Switchgrass Phyllosphere	QGSVVLAFILVLLVLKRFFMASSASYPDFRSMIFSRFIVLLLLIIYEHHVISARACFNLILILVAWN
Ga0314716_1426411	3300032970	Switchgrass Phyllosphere	ITRTEAFFMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0314760_10482181	3300033530	Switchgrass Phyllosphere	RSGQRCSCFYLGITRTEAFLMASNASYPDVRSMAFSRFIVLLLPTIYEYHVVSVQSRFNLMLILVA
Ga0314762_10293911	3300033539	Switchgrass Phyllosphere	ASYPDFRSMTFSISTMLWLFIIYEYHVVSVQSRFNLMLILVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038063

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences