NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F036978

Metagenome Family F036978

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F036978
Family Type Metagenome
Number of Sequences 169
Average Sequence Length 48 residues
Representative Sequence FLIGSQLTFTVPVDGRLYLAINDDDYSDNGGSFSVKIRY
Number of Associated Samples 147
Number of Associated Scaffolds 169

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.67 %
% of genes near scaffold ends (potentially truncated) 87.57 %
% of genes from short scaffolds (< 2000 bps) 84.02 %
Associated GOLD sequencing projects 140
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (85.207 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(17.752 % of family members)
Environment Ontology (ENVO) Unclassified
(46.154 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.846 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 169 Family Scaffolds
PF07690MFS_1 14.20
PF04237YjbR 5.92
PF15919HicB_lk_antitox 4.14
PF00072Response_reg 1.78
PF12796Ank_2 1.78
PF07992Pyr_redox_2 1.78
PF07676PD40 1.78
PF00069Pkinase 1.78
PF11396PepSY_like 1.18
PF02518HATPase_c 1.18
PF01695IstB_IS21 1.18
PF01938TRAM 1.18
PF02852Pyr_redox_dim 1.18
PF12833HTH_18 0.59
PF13946DUF4214 0.59
PF13858DUF4199 0.59
PF07883Cupin_2 0.59
PF02896PEP-utilizers_C 0.59
PF13424TPR_12 0.59
PF03422CBM_6 0.59
PF03100CcmE 0.59
PF13673Acetyltransf_10 0.59
PF13185GAF_2 0.59
PF13581HATPase_c_2 0.59
PF03176MMPL 0.59
PF00479G6PD_N 0.59
PF08388GIIM 0.59
PF00271Helicase_C 0.59
PF02371Transposase_20 0.59
PF00486Trans_reg_C 0.59
PF01627Hpt 0.59
PF00174Oxidored_molyb 0.59
PF12680SnoaL_2 0.59
PF16355DUF4982 0.59
PF00122E1-E2_ATPase 0.59
PF13847Methyltransf_31 0.59
PF04471Mrr_cat 0.59
PF00936BMC 0.59

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 169 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 7.10
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 5.92
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 1.18
COG0364Glucose-6-phosphate 1-dehydrogenaseCarbohydrate transport and metabolism [G] 0.59
COG0474Magnesium-transporting ATPase (P-type)Inorganic ion transport and metabolism [P] 0.59
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.59
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.59
COG2216K+ transport ATPase, ATPase subunit KdpBInorganic ion transport and metabolism [P] 0.59
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 0.59
COG2332Cytochrome c biogenesis protein CcmEPosttranslational modification, protein turnover, chaperones [O] 0.59
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.59
COG3547TransposaseMobilome: prophages, transposons [X] 0.59
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.59


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.21 %
UnclassifiedrootN/A14.79 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886012|MBSR1b_contig_6464261All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101956855All Organisms → cellular organisms → Bacteria → Acidobacteria1661Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_104303303All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300000559|F14TC_104282300All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300000574|JGI1357J11328_10049494All Organisms → cellular organisms → Bacteria1660Open in IMG/M
3300001431|F14TB_106435203All Organisms → cellular organisms → Bacteria1432Open in IMG/M
3300002561|JGI25384J37096_10225677All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300002910|JGI25615J43890_1032463All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300004157|Ga0062590_100694201All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300005171|Ga0066677_10491402All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300005176|Ga0066679_10106602All Organisms → cellular organisms → Bacteria → Acidobacteria1711Open in IMG/M
3300005178|Ga0066688_10503485All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300005180|Ga0066685_10536018All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300005332|Ga0066388_101503917All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300005336|Ga0070680_100657042All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300005444|Ga0070694_100066981All Organisms → cellular organisms → Bacteria2464Open in IMG/M
3300005445|Ga0070708_100914436All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300005447|Ga0066689_10977206All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → Blastopirellula marina522Open in IMG/M
3300005536|Ga0070697_101039343All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300005543|Ga0070672_101882142All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium538Open in IMG/M
3300005544|Ga0070686_100058968All Organisms → cellular organisms → Bacteria2471Open in IMG/M
3300005560|Ga0066670_10981633All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005563|Ga0068855_101140282All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300005566|Ga0066693_10285514All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005568|Ga0066703_10395951All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300005576|Ga0066708_10394975All Organisms → cellular organisms → Bacteria → Acidobacteria888Open in IMG/M
3300005586|Ga0066691_10769371All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300005616|Ga0068852_100653421All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300005616|Ga0068852_100996974All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium856Open in IMG/M
3300005617|Ga0068859_100368063All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300005617|Ga0068859_100924998All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium956Open in IMG/M
3300005764|Ga0066903_107881516All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005840|Ga0068870_10668170All Organisms → cellular organisms → Bacteria → Acidobacteria713Open in IMG/M
3300005843|Ga0068860_100379871All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300006032|Ga0066696_10734576All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300006794|Ga0066658_10524152All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300006797|Ga0066659_11657054All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300006800|Ga0066660_10462492All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium1062Open in IMG/M
3300006800|Ga0066660_11424316All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300006847|Ga0075431_101408793All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium656Open in IMG/M
3300006871|Ga0075434_101188485All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300006871|Ga0075434_101371704All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300006881|Ga0068865_100329122All Organisms → cellular organisms → Bacteria1231Open in IMG/M
3300009012|Ga0066710_101158516All Organisms → cellular organisms → Bacteria → Acidobacteria1197Open in IMG/M
3300009088|Ga0099830_11381866All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300009090|Ga0099827_11982002All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300009094|Ga0111539_10018818All Organisms → cellular organisms → Bacteria8545Open in IMG/M
3300009094|Ga0111539_10479021All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F191449Open in IMG/M
3300009100|Ga0075418_12037402All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300009143|Ga0099792_10742819All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300009147|Ga0114129_10337943All Organisms → cellular organisms → Bacteria1998Open in IMG/M
3300009147|Ga0114129_11260940All Organisms → cellular organisms → Bacteria → Acidobacteria918Open in IMG/M
3300009148|Ga0105243_10551586All Organisms → cellular organisms → Bacteria → Acidobacteria1101Open in IMG/M
3300009148|Ga0105243_10662511All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1013Open in IMG/M
3300009177|Ga0105248_10979910All Organisms → cellular organisms → Bacteria → Acidobacteria955Open in IMG/M
3300009177|Ga0105248_11345733All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium808Open in IMG/M
3300009177|Ga0105248_12800058All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300010301|Ga0134070_10203413All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium727Open in IMG/M
3300010358|Ga0126370_11165987All Organisms → cellular organisms → Bacteria → Acidobacteria714Open in IMG/M
3300010361|Ga0126378_12402220All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300010362|Ga0126377_12872862All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300010375|Ga0105239_10525164All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1347Open in IMG/M
3300010398|Ga0126383_13234874All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300010401|Ga0134121_12972196All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300010403|Ga0134123_11057975All Organisms → cellular organisms → Bacteria → Acidobacteria832Open in IMG/M
3300011119|Ga0105246_11295536All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300011271|Ga0137393_10894134Not Available758Open in IMG/M
3300012096|Ga0137389_10205353All Organisms → cellular organisms → Bacteria → Acidobacteria1642Open in IMG/M
3300012185|Ga0136619_10173060All Organisms → cellular organisms → Bacteria → Acidobacteria824Open in IMG/M
3300012205|Ga0137362_10535678All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300012205|Ga0137362_10974051All Organisms → cellular organisms → Bacteria → Acidobacteria723Open in IMG/M
3300012205|Ga0137362_11049172Not Available693Open in IMG/M
3300012207|Ga0137381_11188752All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300012227|Ga0137449_1018915All Organisms → cellular organisms → Bacteria → Acidobacteria1307Open in IMG/M
3300012285|Ga0137370_10545544All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300012349|Ga0137387_10783348All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300012350|Ga0137372_10796313All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium678Open in IMG/M
3300012351|Ga0137386_11140837All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300012353|Ga0137367_10122918All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium1904Open in IMG/M
3300012354|Ga0137366_10469294All Organisms → cellular organisms → Bacteria → Acidobacteria911Open in IMG/M
3300012354|Ga0137366_10835188All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300012354|Ga0137366_11160099All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300012357|Ga0137384_10575276All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300012357|Ga0137384_10683041All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300012360|Ga0137375_11404831Not Available519Open in IMG/M
3300012532|Ga0137373_11042618Not Available589Open in IMG/M
3300012532|Ga0137373_11240803All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300012684|Ga0136614_11221088All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300012913|Ga0157298_10425930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300012923|Ga0137359_10390860All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300012923|Ga0137359_10396988All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300012927|Ga0137416_10285016All Organisms → cellular organisms → Bacteria → Acidobacteria1363Open in IMG/M
3300012971|Ga0126369_12046172All Organisms → cellular organisms → Bacteria → Acidobacteria660Open in IMG/M
3300012977|Ga0134087_10201473All Organisms → cellular organisms → Bacteria → Acidobacteria891Open in IMG/M
3300013297|Ga0157378_13305996All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300013308|Ga0157375_10417351All Organisms → cellular organisms → Bacteria → Acidobacteria1508Open in IMG/M
3300013308|Ga0157375_11395988All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300015078|Ga0167660_1010403All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300015241|Ga0137418_11111995All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300015357|Ga0134072_10240821All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300015371|Ga0132258_10771039All Organisms → cellular organisms → Bacteria → Acidobacteria2423Open in IMG/M
3300015373|Ga0132257_100389990All Organisms → cellular organisms → Bacteria → Acidobacteria1691Open in IMG/M
3300016357|Ga0182032_10115564All Organisms → cellular organisms → Bacteria → Acidobacteria1925Open in IMG/M
3300017656|Ga0134112_10314348All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300017792|Ga0163161_10806950All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300018076|Ga0184609_10364721All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium674Open in IMG/M
3300018083|Ga0184628_10454398All Organisms → cellular organisms → Bacteria → Acidobacteria667Open in IMG/M
3300018482|Ga0066669_12426958All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300019767|Ga0190267_11093599All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300019885|Ga0193747_1010376All Organisms → cellular organisms → Bacteria → Acidobacteria2243Open in IMG/M
3300020202|Ga0196964_10031164All Organisms → cellular organisms → Bacteria → Acidobacteria2212Open in IMG/M
3300024290|Ga0247667_1069958All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300025315|Ga0207697_10382332All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300025325|Ga0209341_10538216All Organisms → cellular organisms → Bacteria → Acidobacteria925Open in IMG/M
3300025917|Ga0207660_10508425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae978Open in IMG/M
3300025918|Ga0207662_10567645All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300025924|Ga0207694_11221116All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300025926|Ga0207659_11213615All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300025930|Ga0207701_10965760All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300025933|Ga0207706_10171908All Organisms → cellular organisms → Bacteria1904Open in IMG/M
3300025940|Ga0207691_11190796All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium632Open in IMG/M
3300025941|Ga0207711_10411441All Organisms → cellular organisms → Bacteria → Acidobacteria1257Open in IMG/M
3300026035|Ga0207703_10433356All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1225Open in IMG/M
3300026088|Ga0207641_10928091All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300026089|Ga0207648_10278435All Organisms → cellular organisms → Bacteria1496Open in IMG/M
3300026142|Ga0207698_10968391All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium860Open in IMG/M
3300026295|Ga0209234_1175741All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium747Open in IMG/M
3300026309|Ga0209055_1139287All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300026313|Ga0209761_1137007All Organisms → cellular organisms → Bacteria → Acidobacteria1170Open in IMG/M
3300026335|Ga0209804_1075151All Organisms → cellular organisms → Bacteria → Acidobacteria1592Open in IMG/M
3300027383|Ga0209213_1100051Not Available536Open in IMG/M
3300027591|Ga0209733_1009031Not Available2605Open in IMG/M
3300027678|Ga0209011_1011162All Organisms → cellular organisms → Bacteria → Acidobacteria2996Open in IMG/M
3300027787|Ga0209074_10132846All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium877Open in IMG/M
3300027875|Ga0209283_10154467All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae1522Open in IMG/M
3300027875|Ga0209283_10517753All Organisms → cellular organisms → Bacteria → Acidobacteria766Open in IMG/M
3300027907|Ga0207428_11301377All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300027909|Ga0209382_10255358All Organisms → cellular organisms → Bacteria → Acidobacteria1989Open in IMG/M
3300028536|Ga0137415_10396433All Organisms → cellular organisms → Bacteria → Acidobacteria1184Open in IMG/M
(restricted) 3300031248|Ga0255312_1112534All Organisms → cellular organisms → Bacteria → Acidobacteria668Open in IMG/M
3300031740|Ga0307468_100503925All Organisms → cellular organisms → Bacteria → Acidobacteria961Open in IMG/M
3300031820|Ga0307473_10622737All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300031892|Ga0310893_10270668All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300031903|Ga0307407_10338012All Organisms → cellular organisms → Bacteria → Acidobacteria1062Open in IMG/M
3300032180|Ga0307471_100563751All Organisms → cellular organisms → Bacteria1295Open in IMG/M
3300032180|Ga0307471_104076561All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300032205|Ga0307472_100294139All Organisms → cellular organisms → Bacteria → Acidobacteria1301Open in IMG/M
3300033412|Ga0310810_10332683All Organisms → cellular organisms → Bacteria → Acidobacteria1610Open in IMG/M
3300034172|Ga0334913_056763All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300034221|Ga0334937_229664All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.24%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.55%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.55%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.37%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.37%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.78%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.78%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.78%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.18%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.18%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.18%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.18%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.18%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.18%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.18%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.59%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.59%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.59%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.59%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.59%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.59%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.59%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.59%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust0.59%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.59%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.59%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.59%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.59%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000574Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 mEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001326Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A28-35cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002910Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cmEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012185Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012227Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2EnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015078Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034172Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMSEnvironmentalOpen in IMG/M
3300034221Biocrust microbial communities from Mojave Desert, California, United States - 33SMCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0479.000031202162886012Miscanthus RhizosphereIGYIRQPSGQPSPVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY
INPhiseqgaiiFebDRAFT_10195685513300000364SoilLSPPYLVGSNLSTSVPMDGRLILAVNDDNYNDNSGSFSVRIRY*
INPhiseqgaiiFebDRAFT_10430330323300000364SoilQPFLIGSQLTFTVPADGRLYLAVNDDDYSDNGGAFKVTIKY*
F14TC_10428230033300000559SoilALIGYIRQPNGQASQAFLVGTQLILSVPADGRLYLAINDDDYSDNGGGFRVKIRY*
JGI1357J11328_1004949423300000574GroundwaterLSSPYLIGSQLSATVPADGRLILLVNDDNYSDNSGSFTVRIRY*
JGI11643J11755_1156754523300000787SoilSQSTFTAQVDGRLYLVVNDDNYTDNSGSFSVRIVYPDNR*
A2835W6_103057913300001326PermafrostQSTFTSPADGRLFLLVNDDNYSDNTGSFSARIVYPDYR*
F14TB_10643520313300001431SoilPGALIGFIRLANGQTSQPFLVGSQLTLNVPADPRLYLGINDDNYSDNGGSFKVTIKY*
JGI25384J37096_1022567723300002561Grasslands SoilGPGALIGYIRMSNGQLSSAYLIGSQLSASAPADGRLILAINDDDYSDNSGSFSVKIRY*
JGI25615J43890_103246323300002910Grasslands SoilDGQQTEAFLIGSQLTFTVPADGRLFLAINDDDYSDNSGSFSVKIRY*
Ga0062590_10069420113300004157SoilGALIGYIRQPNGQVSQPFLVGTQLTLSVPVDGRLYLAINDDDYSDNGGGFKVRIRY*
Ga0062594_10122497913300005093SoilVFLVGSQATFTTPVDGRLYLLVNDDNYGDNSGSFTARIVYPDNR*
Ga0066677_1049140213300005171SoilLSQAYLIGSQLSTTVPTDGRLILAINDDDYSDNSGSFSVRIRH*
Ga0066679_1010660213300005176SoilNGQLSQAYLIGSNLTTTVPTDGRLILAINDDDYSDNRGSFSVRIRY*
Ga0066688_1050348533300005178SoilYIRMSNGQLSQAYLVGSQLSSTVPVDGRLILAINDDDYSDNSGSFSVRIRH*
Ga0066685_1053601823300005180SoilDSQQLQAFVIGSQLTFTVPSDGRLYLAINDDDYSDNSGSFSVRIRY*
Ga0066388_10150391713300005332Tropical Forest SoilQSDGQSSQAFLVGTQLTLKVPADGRLFLAINDDNYSDNSGAFKVKIRH*
Ga0070680_10065704223300005336Corn RhizosphereFLVGSQLTFTVPVDGRLYLLINDDNYSDNGGTFNVRIRY*
Ga0070694_10006698143300005444Corn, Switchgrass And Miscanthus RhizosphereGIVGTRPLPNSGPGALIGYIRQPSGQPSQVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY*
Ga0070708_10091443623300005445Corn, Switchgrass And Miscanthus RhizosphereGAGALIAYIRMLNGQLSQAYLIGSQLSTTVPVEGRLILAINDDDYSDNGGSFSVRIKY*
Ga0066689_1097720613300005447SoilLIGYIRTPDGQQSPAFLIGSQLTFTVPVDGRLYLAINDDDFSDNSGSFSVRIRY*
Ga0070697_10103934313300005536Corn, Switchgrass And Miscanthus RhizosphereGALIAYIRMPNGQMSQAYLIGSQLSTTVPLDGRLILAINDDDYSDNGGSFTVRIRY*
Ga0070672_10188214223300005543Miscanthus RhizospherePGALIGYIRQPSGQPSQVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY*
Ga0070686_10005896843300005544Switchgrass RhizosphereGPGALIGYIRQPSGQPSQVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY*
Ga0070693_10116994413300005547Corn, Switchgrass And Miscanthus RhizosphereGSQSTFTAQVDGRLYLVVNDDNYTDNSGSFSVRIVYPENR*
Ga0066670_1098163313300005560SoilGALIGYIRMSNGQLSSAYLIGSQLSASAPADGRLILAINDDDYSDNSGSFSVKVRY*
Ga0068855_10114028223300005563Corn RhizosphereGQASQAFLVGTQLTLSVPADGRLYLAINDDDYSDNGGAFKVRIRY*
Ga0066693_1028551433300005566SoilGALIAYIRMSNGQLSQAYLIGSQLSTTVPTDGRLILAINDDDYSDNSGSFSVKVRY*
Ga0066703_1039595113300005568SoilYLIGSQLSTTVPTDGRLILAINDDDYSDNSGSFSVKIRY*
Ga0066708_1039497523300005576SoilSLTTTVPMDGRLILAVNDDDYSDNSGSFSVRIRY*
Ga0068857_10236562613300005577Corn RhizosphereGNQATFTTPVDGRLYLMVNDDNFSDNSGSFSARIVYPSFR*
Ga0066691_1076937123300005586SoilAYVRMANGQLSQPYLVGSHLDGTVPVDGRLILAINDDNYSDNSGSFSVRIRY*
Ga0068852_10065342123300005616Corn RhizosphereVGTQLTFSVPVDGRLYLAINDDDYSDNGGGFKVRIRY*
Ga0068852_10099697423300005616Corn RhizosphereQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY*
Ga0068859_10036806323300005617Switchgrass RhizospherePGALIGYIRQQNGQSSQPFLVGTQLTFSVPVDGRLYLAINDDDYSDNGGGFKVRIRY*
Ga0068859_10092499813300005617Switchgrass RhizosphereALIGYIRQPNGQASQPFLVGTQLTLTAPADGRLYLAINDDDYSDNGGGFKVKIRY*
Ga0066903_10788151623300005764Tropical Forest SoilQLSPAYLVGSHLTTTAPMDGRLILAVNDDNYNDNSGSFSVTIRY*
Ga0068870_1066817013300005840Miscanthus RhizosphereQPNGQASQPFLVGTQLVLSVPIEGRLYLAINDDDYSDNGGGFKVKIRY*
Ga0068860_10037987113300005843Switchgrass RhizosphereYIRNVNGSLSPAYLVGSNLTTSVPMDGRLILAVNDDNYNDNSGTFRVTVRY*
Ga0066696_1073457613300006032SoilMSQPFLVGPSLTTTVPMDGRLILAINDDDYSDNSGSFSVRIRY*
Ga0066658_1052415213300006794SoilYFIGSQLSTTVPADGRLILAINDDDYSDNSGSFSVRIRH*
Ga0066659_1165705423300006797SoilSQLTFTVPVEGRLYLAINDDDYSDNSGSFSVRIRY*
Ga0066660_1046249223300006800SoilQLSTTVPADGRLILAINDDDYSDNSGSFSVRIRH*
Ga0066660_1142431623300006800SoilQLSTTVPTDGRLILAINDDDYSDNSGSFSVRIRH*
Ga0075431_10140879313300006847Populus RhizosphereGSQLTISAPADGRLYLAINDDDYSDNGGAFKVTIRY*
Ga0075434_10118848513300006871Populus RhizosphereDANGQASQPFLVGPSVTMTVPVDGRLILAINDDNYNDNSGSFSVRIRY*
Ga0075434_10137170423300006871Populus RhizosphereMANGQLSPPYLIGSNLTTSVPMDGRLILAINDDDYSDNSGSFSVRIRY*
Ga0068865_10032912213300006881Miscanthus RhizosphereSQVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY*
Ga0066710_10115851623300009012Grasslands SoilYIRMSNGQLSQAYLIGSQLSTTVPVDGRLILAINDDDYSDNSGSFSVKIRY
Ga0099830_1138186623300009088Vadose Zone SoilQLAGTVPTDGRLILAINDDNYGDNSGSFSVRIRY*
Ga0099827_1198200223300009090Vadose Zone SoilYLIGSHLDATVPVDGRLILLINDDNYNDNSGSFSVRIRY*
Ga0111539_10018818103300009094Populus RhizosphereQASQPFLVGTQLTLSVPVDGRLYLAINDDDYSDNGGSGFKVKIRY*
Ga0111539_1047902133300009094Populus RhizosphereVATAGAGALIGVIRQPNGQTTQAFLVGSQLTFTIPVDGRLYLLINDDNYSDNGGAFKVTIRY*
Ga0075418_1203740213300009100Populus RhizosphereGALIGFIRQLNGQASQVFLVGTQLTLSVPVDGRLYLAINDDDFSDNGGAFKVKIRY*
Ga0099792_1074281913300009143Vadose Zone SoilYIRMSNGQLSQAYLIGSNLTTTVPTDGRLILAINDDDYSDNSGSFSVRIRY*
Ga0114129_1033794343300009147Populus RhizosphereVFLVGTQLTLSVPVDGRLYLAINDDDYSDNGGAFKVKIRY*
Ga0114129_1126094013300009147Populus RhizosphereNGQASQVFLVGTQLTLSVPVDGRLYLAINDDDYSDNGGGFKVKIRY*
Ga0105243_1055158613300009148Miscanthus RhizosphereSQPYLIGANLSTTVPVDGRLILAINDDDFSDNSGSFSVRIRY*
Ga0105243_1066251123300009148Miscanthus RhizospherePLPNSGPGALIGYIRQPSGQPSPVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY*
Ga0105242_1239417623300009176Miscanthus RhizosphereLVGDQMTLTVPSDGRLFLLVNDDNYSDNTGSFSVRIQYPDNR*
Ga0105248_1097991023300009177Switchgrass RhizosphereFFIGSSLTYNTTTDGRLYLAINDDNYNDNSGSFTVRIRY*
Ga0105248_1134573323300009177Switchgrass RhizosphereGPQLTFTAPADGRLYLLINDDNYSDNGGVFRVKIKY*
Ga0105248_1280005813300009177Switchgrass RhizosphereIRNVNGSLSPAYLVGSNLTTSVPMDGRLILAVNDDNYNDNSGTFRVTVRY*
Ga0126309_1056593723300010039Serpentine SoilIGDQMTLTASTDGRLFLLVNDDNYNDNSGSFSARVVYPEYR*
Ga0134070_1020341313300010301Grasslands SoilGALIGYIRMSNGQLSSAYLIGSQLSASAPADGRLILAINDDDYSDNSGSFSVKIRY*
Ga0126370_1116598713300010358Tropical Forest SoilSNLSSSVPMDGRLILAVNDDNYNDNSGSFSVRVRY*
Ga0126378_1240222023300010361Tropical Forest SoilYLVGSNLSSSVPMDGRLILAVNDDNYNDNSGSFSVRVRY*
Ga0126377_1287286213300010362Tropical Forest SoilLIGYLRTPDGQQTPAFLIGTQMTYTAQADGRLYLAINDDDYSDNGGSFSVTIRY*
Ga0105239_1052516423300010375Corn RhizosphereRQPNGQASQAFLVGTQLTLSVPADGRLYLAINDDDYSDNGGAFKVRIRY*
Ga0126383_1323487423300010398Tropical Forest SoilFLIGSNQSTTVPMDGRLILAVNDDNYSDNTGSFSVKIKY*
Ga0134121_1297219613300010401Terrestrial SoilQTSQAYLIGSNLTTTVPTDGRLFLAVNDDDYSDNSGAFSVRIRY*
Ga0134123_1105797523300010403Terrestrial SoilNGQLSPPYLVGSNLSTSVPMDGRLILAVNDDNYNDNSGSFSVRIRY*
Ga0105246_1129553613300011119Miscanthus RhizosphereGPGALIGYIRQQNGQASQPFLVGTQLSFSVPVDGRLYLAINDDDYSDNGGGFKVKIRY*
Ga0137393_1089413413300011271Vadose Zone SoilGQQSQPFLIGSQLTFTVPADGRLYLEINDDDYSDNGGSFSVKIRY*
Ga0137389_1020535313300012096Vadose Zone SoilYIRTTDGQQSQPFLIGTQLTLTIPTDGRLYLAINDDDYSDNGGSFSVKIRY*
Ga0136619_1017306013300012185Polar Desert SandVGPQLTFTAQSDGRLILLINDDNYNDNSGNFSVRINVN*
Ga0137383_1090812323300012199Vadose Zone SoilGQTTQPFLVGNQVTLTAASDGRLFLLVNDDNYSDNSGSFSARIQYPDNR*
Ga0137362_1053567833300012205Vadose Zone SoilGQQTQAFLIGSQLAFTVPVDGRLYLAINDDDYSDNGGSFSVKIRY*
Ga0137362_1097405123300012205Vadose Zone SoilMSNGQLSQPYLIGSQLSTSVPVDGRLILAINDDDYSDNSGSFSVRIRY*
Ga0137362_1104917213300012205Vadose Zone SoilPGALIAYIRMSNGQLSQPYLIGSQLSTSVPVDGRLILAINDDDYSDNSGSFSVRIRY*
Ga0137381_1118875213300012207Vadose Zone SoilGPGALIGYIRTPDGQQSPAFLIGSQLTFTVPVDGRLYLAINDDDYSDNGGSFSVRIRY*
Ga0137449_101891513300012227SoilSQLSSTVPVDGRLILAINDDNYNDNSGSFSVRIRY*
Ga0137370_1054554413300012285Vadose Zone SoilIGSQSTFTVPVDGRLYLAINDDDYSDNSGSFSVRIKY*
Ga0137387_1078334823300012349Vadose Zone SoilPGALIAYIRMSNGQLSQAYLIGSQLSTTVPVDGRLILAINDDDYSDNSGSFSVKIRY*
Ga0137372_1079631323300012350Vadose Zone SoilQQTQAFLIGSQLTFTAPADGRLYLAINDDDYSDNGGTFSVRIRY*
Ga0137386_1114083713300012351Vadose Zone SoilSQSTFTVPVDGRLYLAINDDDYSDNSGSFSVKIRY*
Ga0137367_1012291823300012353Vadose Zone SoilNAGPGALIGYIRLLDGQQMQAFLIGSQLSFTAPADGRLFLAINDDNYSDNSGSFSVRIRY
Ga0137366_1046929413300012354Vadose Zone SoilIVGTKPVPSAGPGALIGYIRTPDGQQTQAFLIGSQLTFTAPSDGRLYLAINDDDYSDNGGTFSVRIRY*
Ga0137366_1083518813300012354Vadose Zone SoilIVGTKPVPSAGPGALIGYIRTPDGQQTQAFLIGSQLTFTAPADGRLYLAINDDDYSDNGGTFSVRIRY*
Ga0137366_1116009923300012354Vadose Zone SoilIGFIRMSDGQNSQPFFIGSQLSFTAQTEGRLVLAINDDDYSDNGGSFTVRIRY*
Ga0137384_1057527613300012357Vadose Zone SoilGTKPVPSAGPGALIGYIRTSDGQQSQAFLIGSQSTFTVPVDGRLYLAINDDDYSDNSGSFSVRIKY*
Ga0137384_1068304113300012357Vadose Zone SoilQTQAFLIGSQLTFTAPADGRLYLAINDDDYSDNGGTFSVRIRY*
Ga0137375_1140483123300012360Vadose Zone SoilGSNLTTSVPVDGRLILAINDDDFSDNSGSFSVRIRY*
Ga0137373_1104261823300012532Vadose Zone SoilRTPDGQQTQAFLIGSQLTFTAPADGRLYLAINDDDYSDNGGSFSVRIRY*
Ga0137373_1124080313300012532Vadose Zone SoilIGSQLTFTAPADGRLYLAINDDDYSDNGGTFSVRIRY*
Ga0136614_1122108813300012684Polar Desert SandFYIGSQQTLTAPADGRLILLINDDNYNDNGGSFVVRIRVN*
Ga0157298_1042593013300012913SoilRPLPNSGPGALIGYIRQPSGQPSQVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY*
Ga0137359_1039086043300012923Vadose Zone SoilGQLSQPYLIGSQLSTSVPVDGRLILAINDDDYSDNSGSFSVRIRY*
Ga0137359_1039698843300012923Vadose Zone SoilPVPNAGPGALIGYIRTSDGQQTQAFLIGSQLAFTVPVDGRLYLAINDDDYSDNGGSFSVKIRY*
Ga0137416_1028501623300012927Vadose Zone SoilYIRMPNGQLSQAYLIGSQLTTTVPADGRLILAINDDDYSDNGGSFTVRIRY*
Ga0126369_1204617213300012971Tropical Forest SoilGPGALIGYIRQANGQSSQVFLVGTQLNLSVPADGRLYLAINDDDYSDNSGAFKVKISY*
Ga0134087_1020147323300012977Grasslands SoilAYIRDANGQMSQPFLVGPSLTTTVPMDGRLILAVNDDDYSDNSGSFSVRIRY*
Ga0157378_1247719413300013297Miscanthus RhizosphereDQMTLTVPSDGRLFLLVNDDNYSDNTGSFSVRIQYPDNR*
Ga0157378_1330599613300013297Miscanthus RhizosphereSPPYLVGSNLTTSVPMDGRLILAVNDDNYNDNSGSFSVRIRY*
Ga0163162_1131127413300013306Switchgrass RhizosphereYFFIGSQATFTIPVDGRLFLAVNDDNYSDNSGSFSVRLVYPAFR*
Ga0157375_1041735113300013308Miscanthus RhizosphereLIGYIRQPSGQPSQVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY*
Ga0157375_1139598823300013308Miscanthus RhizosphereAIVGTRPLPTSGPGALIGYIRQPNGQVSQPFLLGTQLTLSVPVDGRLYLAINDDDYSDNGGGFKVKIRY*
Ga0167660_101040313300015078Glacier Forefield SoilGALIAYIRQANGQLSAAYLVGSQLSTSVPADGRLILAINDDNYGDNSGSFSVRIRY*
Ga0137418_1111199513300015241Vadose Zone SoilAYVRMANGQLSQPYLVGSQLDGTVPVDGRLILAINDDNYSDNSGSFSVRIRY*
Ga0134072_1024082123300015357Grasslands SoilPTAGPGALIGYIRMSNGQLSSAYLIGSQLSASAPADGRLILAINDDDYSDNSGSFSVKIRY*
Ga0132258_1077103913300015371Arabidopsis RhizosphereTRPVPTAGPGALIGYIRMTNGQTSQPFLIGSQLTFTVPSDGRLYLAVNDDDYSDNGGAFKVTIKY*
Ga0132257_10038999023300015373Arabidopsis RhizosphereSGPGALIGYIRQPNGQASQPFLVGTQLTLSVPVDGRLYLAINDDDYSDNGGGFKVKIRY*
Ga0182032_1011556413300016357SoilPYLIGSNLSSSVPMDGRLILAVNDDNYNDNSGSFSVRVRY
Ga0134112_1031434823300017656Grasslands SoilMSNGQLSSAYLIGSQLSASAPADGRLILAINDDDYSDNSGSFSVKIRY
Ga0163161_1080695013300017792Switchgrass RhizosphereMANGQLSPPYLVGSNLTTSVPMDGRLILAVNDDNYSDNSGSFSVRIRY
Ga0184618_1043431613300018071Groundwater SedimentLTATAPSDGRLFLLVNDDNYTDNSGSFSVRIQYPDNR
Ga0184609_1036472123300018076Groundwater SedimentSAGPGALIGYIRLANGQVSQPFLVGSQLTLTMPADGRLYLAINDDDYSDNGGGFKVRIKY
Ga0184628_1045439813300018083Groundwater SedimentGSNLTTSVPMDGRLILAVNDDNYNDNSGTFRVTVRY
Ga0190265_1032610723300018422SoilGGGTTQPFLVGSQLVFTAQTDGRLYLLVNDDDYGDNSGSFSVRIVYQDIR
Ga0190272_1016888223300018429SoilLIGSQMTFTAPVDGRLYLLVNDDNYGDNSGSFSARIVYPENR
Ga0066669_1242695813300018482Grasslands SoilPDGQTSQPFLIGSQLTFTVPADGRWYLAINDDDFSDNSGSFSVRIRY
Ga0190267_1109359913300019767SoilQNSQPFFVGSSLVWTATADGRLYLLVNDDNYNDNSGSFSVRIRLN
Ga0193725_106793313300019883SoilAGSQVTLTVPADGRLYLLVNDDNYSDNSGSFSVRIVYPDYR
Ga0193747_101037613300019885SoilIRMSNGQLSPAYLIGSQLTTTVPADGRLILAINDDDYSDNGGSFSVRIRY
Ga0193755_106014013300020004SoilVFLVGSQATLTTPVDGRLYLMVNDDNYSDNSGSFSARVVYPDYR
Ga0196964_1003116413300020202SoilGANFSATAPADGRLILLINDDNYSDNGGSFEVRITVN
Ga0247667_106995833300024290SoilYLIGSQLTTSVPVDGRLILAINDDDYSDNSGSFNVIVRY
Ga0207697_1038233223300025315Corn, Switchgrass And Miscanthus RhizosphereQNGQASQPFLVGTQLTFSVPVDGRLYLAINDDDYSDNGGGFKVKIRY
Ga0209341_1053821623300025325SoilIGSQLTITIQVDGRLYLAINDDDYSDNGGSFNVKISYR
Ga0207660_1050842533300025917Corn RhizosphereLPTSGPGALIGYIRQQNGQASQPFLVGTQLTFSVPVDGRLYLLINDDNYSDNGGTFNVRIRY
Ga0207662_1056764523300025918Switchgrass RhizosphereLIGYIRQPNGQASQPFLVGTQLTLSVPVDGRLYLAINDDDYSDNGGGFKVKIRY
Ga0207646_1179228523300025922Corn, Switchgrass And Miscanthus RhizosphereFLVGSQATFTTPVDGRLYLLVNDDNYGDNSGSFTARIVYPDYR
Ga0207694_1122111623300025924Corn RhizosphereMSQPFLVGTQLTLSVPVDGRLYLAINDDDYSDNGGGFKVRIR
Ga0207659_1121361513300025926Miscanthus RhizosphereSQPFLVGTQLTFSVPVDGRLYLAINDDDYSDNGGGFKVKIRY
Ga0207701_1096576013300025930Corn, Switchgrass And Miscanthus RhizosphereIRMANGNLSPPYLIGSNLATSAPMDGRLILAVNDDNYNDNTGSFSVRIRY
Ga0207706_1017190833300025933Corn RhizosphereQPNGQTSQAFLVGSQLTFTVPVDGRLYLLINDDNYSDNGGTFNVRIRY
Ga0207670_1086868213300025936Switchgrass RhizosphereSQATFTTPVDGRLYLAINDDNYTDNSGSFSVRLVYPSFR
Ga0207691_1119079613300025940Miscanthus RhizospherePLPNSGPGALIGYIRQPSGQPSQVFLVGPQLTFTAPADGRLYLLINDDNYSDNGGVFKVKIKY
Ga0207711_1041144113300025941Switchgrass RhizosphereVGTRPLPNSGPGALIGYIRQPNGQASQPFLVGTQLVLSVPIEGRLYLAINDDDYSDNGGGFKVKIRY
Ga0207703_1043335613300026035Switchgrass RhizospherePFLVGTQLTFSVPVDGRLYLAINDDDYSDNGGGFKVKIRY
Ga0207641_1092809113300026088Switchgrass RhizosphereGTRPLPNSGPGALIGYIRQPNGQASQAFLVGTQLILSVPADGRLYLAINDDDYSDNGGGFKVKIRY
Ga0207648_1027843513300026089Miscanthus RhizosphereLVGSNLSTSVPMDGRLILAVNDDNYNDNSGSFSVRIRY
Ga0207698_1096839113300026142Corn RhizosphereIGSQATFTIPVDGRLFLAVNDDNYSDNSGSFSVRLVYPAFR
Ga0209234_117574113300026295Grasslands SoilPTAGPGALIGYIRMSNGQLSSAYLIGSQLSASAPADGRLILAINDDDYSDNSGSFSVKIR
Ga0209055_113928713300026309SoilYFIGSQLSTTVPADGRLILAINDDDYSDNSGSFSVRIRH
Ga0209761_113700713300026313Grasslands SoilAGPGALIGYIRMSNGQLSSAYLIGSQLSASAPADGRLILAINDDDYSDNSGSFSVKIRY
Ga0209804_107515113300026335SoilGSQLTLTIPADGRLYLAINDDDYSDNSGSFSVRIRY
Ga0209213_110005123300027383Forest SoilMPDGQMSQAYLIGSQLSSTVPVDGRLILAINDDDYSDNGGSFTVRIRY
Ga0209733_100903143300027591Forest SoilTSQAFLIGSQLTFTAPTDGRLYLAINDDNYSDNSGSFSVRIRY
Ga0209011_101116243300027678Forest SoilKPVPSAGPGALIGYLRLADGQTTAAFLIGSQLIYTATADGRLFLAINDDDYSDNGGSFSVKIKY
Ga0209074_1013284613300027787Agricultural SoilIGSSLTYNATTDGRLYLAINDDNYNDNSGSFTVRIRY
Ga0209283_1015446743300027875Vadose Zone SoilFLIGSQLTFTVPVDGRLYLAINDDDYSDNGGSFSVKIRY
Ga0209283_1051775323300027875Vadose Zone SoilRTSDGQQSQPFLIGSQLTFTVPVDGRLYLAINDDDYSDNGGSFSVKIRY
Ga0207428_1130137723300027907Populus RhizosphereAIVGTRPVPNAGAGALIGFIRQPNGQTSQAFLVGSQLTFTVPVDGRLYLLINDDNYSDNGGAFKVTIRY
Ga0209382_1025535823300027909Populus RhizospherePGALIGYIRQPNGQASQVFLVGTQLTLSVPVDGRLYLAINDDDYSDNGGGFKVKIRY
Ga0137415_1039643323300028536Vadose Zone SoilYIRMPNGQLSQAYLIGSQLTTTVPADGRLILAINDDDYSDNGGSFTVRIRY
(restricted) Ga0255312_111253413300031248Sandy SoilVGTRPVPTAGPGALIGYIRMDNGQMSQPFLIGSQLTLSVPADGRLYLAVNDDDYSDNGGAFKVTIRY
Ga0307513_1111209213300031456EctomycorrhizaQATLTTPVDGRLYLMVNDDNFSDNSGSFSARIVYPEFRQ
Ga0307468_10050392523300031740Hardwood Forest SoilLPSSGPGALIGYIRQPDGQTSQPFLVGTQLTFSVPIDGRLYLAINDDDYSDNGSGFKVRVRY
Ga0307468_10058297313300031740Hardwood Forest SoilSQATITIPADGRLYLMVNDDNFSDNSGSFTVVVTYPDYR
Ga0307473_1062273713300031820Hardwood Forest SoilGALIGYIRTLDGQQAPAFLIGTQMTYTVQADGRLFLAINDDDYSDNGGSFSVRIRY
Ga0310893_1027066813300031892SoilSQLTFTVPVDGRLYLLINDDNYSDNGGTFNVRIRY
Ga0307407_1033801213300031903RhizosphereSGPGALIGYIRQPNGQASQAFLVGTQLTLSVPADGRLYLAINDDDYSDNGGGFKVKIRY
Ga0307471_10056375113300032180Hardwood Forest SoilGYIRQSNGQASQPFLVGTQLTLSVPVDGRLYLVINDDDYSDNGGAFKVKIRY
Ga0307471_10407656113300032180Hardwood Forest SoilQSPAFLIGNQLTYTVPVDGRLYLAINDDDYSDNGGSFSVTIRR
Ga0307472_10029413923300032205Hardwood Forest SoilTNAGPGALIGYIRTPDGQQSPAFLIGSQLTLTVPVDGRLYLAINDDDYSDNGGSFSVRIR
Ga0310810_1033268313300033412SoilGQASQPFLVGTQLTLTAPADGRLYLAINDDDYSDNGGGFKVKIRY
Ga0334913_056763_2_1693300034172Sub-Biocrust SoilLIGFIRTSSGQISQPFLIGNQLTFNAQTDGRLILAINDDDYSDNGGNFAVRIRVN
Ga0334937_229664_2_1153300034221BiocrustGNQLTFNAQTDGRLILAINDDDYSDNGGNFAVRIRVN


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