Metagenome / Metatranscriptome Family F036786

Basic Information
Family ID	F036786
Family Type	Metagenome / Metatranscriptome
Number of Sequences	169
Average Sequence Length	61 residues
Representative Sequence	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP
Number of Associated Samples	153
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.92 %
% of genes near scaffold ends (potentially truncated)	54.44 %
% of genes from short scaffolds (< 2000 bps)	85.21 %
Associated GOLD sequencing projects	144
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (69.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.260 % of family members)
Environment Ontology (ENVO)	Unclassified (37.870 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.604 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.58% β-sheet: 0.00% Coil/Unstructured: 59.42%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF00873	ACR_tran	56.80
PF03070	TENA_THI-4	24.85
PF06080	DUF938	6.51
PF13437	HlyD_3	1.18
PF07883	Cupin_2	0.59
PF12700	HlyD_2	0.59
PF12146	Hydrolase_4	0.59
PF00440	TetR_N	0.59

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.05 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.50 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.77 %
Unclassified	root	N/A	30.77 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.96 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.18 %
Geminicoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.96 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.18 %
Geminicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.96 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.18 %
Geminicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	0.59 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459011\|GKWS7RC01EOXZ3	Not Available	512	Open in IMG/M
2199352025\|deepsgr__Contig_58501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1105	Open in IMG/M
3300000732\|JGI12023J11887_1010433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300000891\|JGI10214J12806_12506570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300001305\|C688J14111_10274050	Not Available	532	Open in IMG/M
3300001686\|C688J18823_10658256	Not Available	667	Open in IMG/M
3300002070\|JGI24750J21931_1002434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2242	Open in IMG/M
3300002077\|JGI24744J21845_10014811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1562	Open in IMG/M
3300002244\|JGI24742J22300_10001162	All Organisms → cellular organisms → Bacteria → Proteobacteria	4093	Open in IMG/M
3300002568\|C688J35102_119497254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	706	Open in IMG/M
3300002568\|C688J35102_120220802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	934	Open in IMG/M
3300004463\|Ga0063356_103429593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300004479\|Ga0062595_100111172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1488	Open in IMG/M
3300005104\|Ga0066818_1016540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	587	Open in IMG/M
3300005146\|Ga0066817_1017038	Not Available	638	Open in IMG/M
3300005147\|Ga0066821_1002946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	954	Open in IMG/M
3300005163\|Ga0066823_10002311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2287	Open in IMG/M
3300005164\|Ga0066815_10025941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300005168\|Ga0066809_10036157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1064	Open in IMG/M
3300005169\|Ga0066810_10101934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	637	Open in IMG/M
3300005173\|Ga0066822_1004764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	750	Open in IMG/M
3300005327\|Ga0070658_10234028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1556	Open in IMG/M
3300005328\|Ga0070676_10024199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3418	Open in IMG/M
3300005329\|Ga0070683_100705254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	966	Open in IMG/M
3300005331\|Ga0070670_100142258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2074	Open in IMG/M
3300005336\|Ga0070680_101410866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	603	Open in IMG/M
3300005339\|Ga0070660_100367336	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300005341\|Ga0070691_10218730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1008	Open in IMG/M
3300005343\|Ga0070687_100958631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	617	Open in IMG/M
3300005345\|Ga0070692_10625512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	716	Open in IMG/M
3300005347\|Ga0070668_100468234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1086	Open in IMG/M
3300005356\|Ga0070674_100687261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	873	Open in IMG/M
3300005365\|Ga0070688_100086127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2043	Open in IMG/M
3300005366\|Ga0070659_100521523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1014	Open in IMG/M
3300005539\|Ga0068853_100446163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1216	Open in IMG/M
3300005545\|Ga0070695_100135178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1704	Open in IMG/M
3300005564\|Ga0070664_101331100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	678	Open in IMG/M
3300005614\|Ga0068856_100665749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1062	Open in IMG/M
3300005719\|Ga0068861_102671754	Not Available	503	Open in IMG/M
3300005841\|Ga0068863_101623293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	656	Open in IMG/M
3300005844\|Ga0068862_101570646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	664	Open in IMG/M
3300006038\|Ga0075365_10363129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1021	Open in IMG/M
3300006038\|Ga0075365_10708843	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300006058\|Ga0075432_10307160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300006178\|Ga0075367_10245236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300006196\|Ga0075422_10476468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300006574\|Ga0074056_11671120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300006579\|Ga0074054_12020328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2380	Open in IMG/M
3300006605\|Ga0074057_12176122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1756	Open in IMG/M
3300006606\|Ga0074062_10037984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300006844\|Ga0075428_102062944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300006871\|Ga0075434_101351248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	723	Open in IMG/M
3300006881\|Ga0068865_100925147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	759	Open in IMG/M
3300009036\|Ga0105244_10184646	Not Available	988	Open in IMG/M
3300009092\|Ga0105250_10442083	Not Available	582	Open in IMG/M
3300009094\|Ga0111539_10161385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2621	Open in IMG/M
3300009094\|Ga0111539_13114097	Not Available	535	Open in IMG/M
3300009101\|Ga0105247_11806717	Not Available	509	Open in IMG/M
3300009156\|Ga0111538_10080585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4143	Open in IMG/M
3300009162\|Ga0075423_12900697	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009174\|Ga0105241_10046108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3309	Open in IMG/M
3300009545\|Ga0105237_11222369	Not Available	758	Open in IMG/M
3300009551\|Ga0105238_10766693	Not Available	979	Open in IMG/M
3300009553\|Ga0105249_12027385	Not Available	648	Open in IMG/M
3300010036\|Ga0126305_11061908	Not Available	557	Open in IMG/M
3300010043\|Ga0126380_10996879	Not Available	705	Open in IMG/M
3300010375\|Ga0105239_11623975	Not Available	748	Open in IMG/M
3300010396\|Ga0134126_11739579	Not Available	684	Open in IMG/M
3300010399\|Ga0134127_11029863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300010400\|Ga0134122_10191025	Not Available	1693	Open in IMG/M
3300012212\|Ga0150985_114605176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258	Open in IMG/M
3300012903\|Ga0157289_10106482	Not Available	809	Open in IMG/M
3300012903\|Ga0157289_10165237	Not Available	695	Open in IMG/M
3300012907\|Ga0157283_10177339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300012937\|Ga0162653_100008923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1168	Open in IMG/M
3300012938\|Ga0162651_100094640	Not Available	508	Open in IMG/M
3300012955\|Ga0164298_11526816	Not Available	523	Open in IMG/M
3300012958\|Ga0164299_10042213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2073	Open in IMG/M
3300012958\|Ga0164299_10501037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	808	Open in IMG/M
3300012960\|Ga0164301_10799352	Not Available	721	Open in IMG/M
3300012961\|Ga0164302_10056886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1972	Open in IMG/M
3300012989\|Ga0164305_10676788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	840	Open in IMG/M
3300013306\|Ga0163162_13416482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	506	Open in IMG/M
3300013308\|Ga0157375_12812713	Not Available	582	Open in IMG/M
3300014325\|Ga0163163_10935198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300014745\|Ga0157377_10205053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1254	Open in IMG/M
3300015372\|Ga0132256_101127623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	899	Open in IMG/M
3300015374\|Ga0132255_103129336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	706	Open in IMG/M
3300017965\|Ga0190266_10225955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300018027\|Ga0184605_10020010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2674	Open in IMG/M
3300018031\|Ga0184634_10052410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1691	Open in IMG/M
3300018031\|Ga0184634_10305561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300018051\|Ga0184620_10047918	Not Available	1192	Open in IMG/M
3300018061\|Ga0184619_10060993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1654	Open in IMG/M
3300018066\|Ga0184617_1070134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	931	Open in IMG/M
3300018066\|Ga0184617_1082089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300018067\|Ga0184611_1002495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4282	Open in IMG/M
3300018072\|Ga0184635_10326530	Not Available	595	Open in IMG/M
3300018073\|Ga0184624_10028592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2140	Open in IMG/M
3300018074\|Ga0184640_10157368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1015	Open in IMG/M
3300018074\|Ga0184640_10442982	Not Available	579	Open in IMG/M
3300018081\|Ga0184625_10082793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1643	Open in IMG/M
3300018082\|Ga0184639_10186186	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300018082\|Ga0184639_10527844	Not Available	591	Open in IMG/M
3300018429\|Ga0190272_11722944	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300018469\|Ga0190270_11403506	Not Available	745	Open in IMG/M
3300019269\|Ga0184644_1467961	Not Available	845	Open in IMG/M
3300019356\|Ga0173481_10044649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1496	Open in IMG/M
3300019356\|Ga0173481_10204414	Not Available	859	Open in IMG/M
3300019361\|Ga0173482_10669287	Not Available	532	Open in IMG/M
3300019887\|Ga0193729_1078762	Not Available	1289	Open in IMG/M
3300020001\|Ga0193731_1087631	Not Available	809	Open in IMG/M
3300020001\|Ga0193731_1175478	Not Available	511	Open in IMG/M
3300020005\|Ga0193697_1009920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2321	Open in IMG/M
3300020005\|Ga0193697_1057610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	962	Open in IMG/M
3300020016\|Ga0193696_1109847	Not Available	704	Open in IMG/M
3300021363\|Ga0193699_10090637	Not Available	1226	Open in IMG/M
3300021363\|Ga0193699_10313877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300022534\|Ga0224452_1257577	Not Available	533	Open in IMG/M
3300022694\|Ga0222623_10009808	Not Available	3469	Open in IMG/M
3300022756\|Ga0222622_10131795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1587	Open in IMG/M
3300022756\|Ga0222622_10576687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300025321\|Ga0207656_10130612	All Organisms → cellular organisms → Bacteria → Proteobacteria	1176	Open in IMG/M
3300025900\|Ga0207710_10128053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1218	Open in IMG/M
3300025904\|Ga0207647_10013987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5553	Open in IMG/M
3300025914\|Ga0207671_10417004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1068	Open in IMG/M
3300025915\|Ga0207693_10488421	Not Available	961	Open in IMG/M
3300025916\|Ga0207663_10416467	Not Available	1030	Open in IMG/M
3300025918\|Ga0207662_10008813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5536	Open in IMG/M
3300025919\|Ga0207657_10059355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3287	Open in IMG/M
3300025925\|Ga0207650_10635457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	899	Open in IMG/M
3300025927\|Ga0207687_10262976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1376	Open in IMG/M
3300025928\|Ga0207700_10009963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5969	Open in IMG/M
3300025934\|Ga0207686_10959862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300026075\|Ga0207708_10158764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1784	Open in IMG/M
3300026088\|Ga0207641_11218309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300026088\|Ga0207641_12370570	Not Available	530	Open in IMG/M
3300026095\|Ga0207676_11307111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300026116\|Ga0207674_10241743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1752	Open in IMG/M
3300026857\|Ga0208893_1003030	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300027903\|Ga0209488_10306238	Not Available	1186	Open in IMG/M
3300028711\|Ga0307293_10035667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1516	Open in IMG/M
3300028713\|Ga0307303_10045987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300028717\|Ga0307298_10015832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1923	Open in IMG/M
3300028721\|Ga0307315_10029009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300028722\|Ga0307319_10103015	Not Available	915	Open in IMG/M
3300028744\|Ga0307318_10004314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4608	Open in IMG/M
3300028755\|Ga0307316_10041597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1527	Open in IMG/M
3300028784\|Ga0307282_10066961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1626	Open in IMG/M
3300028793\|Ga0307299_10030349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1963	Open in IMG/M
3300028793\|Ga0307299_10069956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1301	Open in IMG/M
3300028799\|Ga0307284_10486859	Not Available	506	Open in IMG/M
3300028807\|Ga0307305_10222897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300028828\|Ga0307312_11183362	Not Available	505	Open in IMG/M
3300028876\|Ga0307286_10051345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1398	Open in IMG/M
3300028880\|Ga0307300_10009746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2439	Open in IMG/M
3300031199\|Ga0307495_10072245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300031200\|Ga0307496_10031368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300031562\|Ga0310886_10458693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300031908\|Ga0310900_10474452	Not Available	967	Open in IMG/M
3300032013\|Ga0310906_10222933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1159	Open in IMG/M
3300032205\|Ga0307472_101411066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300032211\|Ga0310896_10310588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300033550\|Ga0247829_11455194	Not Available	566	Open in IMG/M
3300034147\|Ga0364925_0409006	Not Available	515	Open in IMG/M
3300034819\|Ga0373958_0220357	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.27%
Host-Associated	Host-Associated	33.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.44%
Plants	Host-Associated → Plants	33.73%
Aquatic	Environmental → Aquatic	11.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.12%
Sediment	Environmental → Aquatic → Sediment	11.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.24%
Roots	Host-Associated → Plants → Roots	2.37%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.18%
Freshwater	Environmental → Aquatic → Freshwater	0.59%
Floodplain	Environmental → Terrestrial → Floodplain	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.24%
Loam	Environmental → Terrestrial → Soil → Loam	10.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.10%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.18%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.59%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.78%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.18%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.59%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.37%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.37%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.78%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.18%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.18%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.18%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.59%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.59%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.59%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.59%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000732	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005104	Soil and rhizosphere microbial communities from Laval, Canada - mgHAC	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026857	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F64_04679360	2170459011	Grass Soil	MIWRRREPTLKEILSDSIVTALMEADGVDPDELEATMKTIGRTSKAVRQKRRWGAWSCSPAPIDQAPSP
deepsgr_00712760	2199352025	Soil	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP
JGI12023J11887_10104332	3300000732	Forest Soil	MIWRQREPTLKEILSDSIVTALMEADGVDPHELEAMLKKIGRMSESVQRVRPW
JGI11643J12802_121214815	3300000890	Soil	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQK
JGI10214J12806_125065702	3300000891	Soil	MIWRQREPTLKEILSDPIVTALMSADGVDPVELQAMLTQINRRL
C688J14111_102740501	3300001305	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSS
C688J18823_106582561	3300001686	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSPRQTGRWGTWSCRPAPTHDAPVP*
JGI24750J21931_10024341	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGXDXLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
JGI24744J21845_100148111	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	KEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
JGI24742J22300_100011622	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDXLELEAMLTQINRXSKSSRQTGRWGTWSCRPAPTHDAPVP*
C688J35102_1194972541	3300002568	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
C688J35102_1202208022	3300002568	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP*
Ga0063356_1034295931	3300004463	Arabidopsis Thaliana Rhizosphere	DPMIWHQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINKKSKSPRQTGRWGTWSCRPAPTQDAPVS*
Ga0062595_1001111722	3300004479	Soil	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGA*
Ga0066818_10165401	3300005104	Soil	SILIGDPMIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSPRQTGRWGTWSCRPAPTHDAPVP*
Ga0066817_10170382	3300005146	Soil	VTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0066821_10029462	3300005147	Soil	MIWRQREPTLKEILSDSIVTALMSADGGDTLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0066823_100023111	3300005163	Soil	MIWRQREPTLKEILSDSIVTALMSADGGDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0066815_100259411	3300005164	Soil	LSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP*
Ga0066809_100361572	3300005168	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT*
Ga0066810_101019341	3300005169	Soil	DESLILIGDPMIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0066822_10047642	3300005173	Soil	MIWRQREPTLKEILSDSIVTALMSADGGDTLELETMLTQINRKWKSSRQTGRWGTWS
Ga0070658_102340281	3300005327	Corn Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKPSRQ
Ga0070676_100241992	3300005328	Miscanthus Rhizosphere	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT*
Ga0070683_1007052541	3300005329	Corn Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0070670_1001422582	3300005331	Switchgrass Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRP
Ga0070680_1014108661	3300005336	Corn Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSK
Ga0070660_1003673361	3300005339	Corn Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKPSRQTGRWGTWSCRPAPTHDAPVP*
Ga0070691_102187302	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0070687_1009586311	3300005343	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGAWSCRPAPNLTAALAPEARTLAPERTPQNLAAER*
Ga0070692_106255122	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRW
Ga0070668_1004682342	3300005347	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGACSCRPAPTPTAALAPEAGTLAPERTPQNLAAER*
Ga0070674_1006872612	3300005356	Miscanthus Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP*
Ga0070688_1000861272	3300005365	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDTLDLEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0070659_1005215231	3300005366	Corn Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDTLELEAMLTQINRKSKSSR
Ga0068853_1004461632	3300005539	Corn Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT*
Ga0070695_1001351782	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSR
Ga0070664_1013311001	3300005564	Corn Rhizosphere	ILIGDPMIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0068856_1006657491	3300005614	Corn Rhizosphere	MIWRQREPTLKEVLSDSIVTALMSADGGDTLELEAMLTQINRKSKSSRQTGRWGTWSCRP
Ga0068861_1026717542	3300005719	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHD
Ga0066903_1034245212	3300005764	Tropical Forest Soil	MIWYRRELTLEEMLSDSVVQAVMAADGVDPVALEVMLKEVGRNVSL
Ga0068863_1016232932	3300005841	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGACSCRPAPTPTAALAPEAGTLAPERTPQNL
Ga0068862_1015706462	3300005844	Switchgrass Rhizosphere	ILIGDPMIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT*
Ga0075365_103631291	3300006038	Populus Endosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGAWSCRPAPTPTAALAPEAG
Ga0075365_107088432	3300006038	Populus Endosphere	MIWRQHEPTLKEILSDSIVTALMEADGVDPDELEAMLKKIGATSKAIRQERRWGAWSCSPAPVDQAPRP*
Ga0075432_103071601	3300006058	Populus Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADSVDPHELEAMLQKIGRTSKSLHRARRWGA*
Ga0075367_102452361	3300006178	Populus Endosphere	MIWRQREPTLKEILSDSIVTALMRADGVDPVELEALLTQISRRSAAARRPEA
Ga0075422_104764681	3300006196	Populus Rhizosphere	IGDPMIWRQREPTLKEILSDSIVTALMSADGGDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP*
Ga0074056_116711202	3300006574	Soil	DPMIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0074054_120203282	3300006579	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAM
Ga0074057_121761222	3300006605	Soil	MIWRQREPTLKEILSDSIVTALMARDGVDPLELEAMLTQINRKSKSSRQQDDG
Ga0074062_100379842	3300006606	Soil	MIWRQREPTLKEILSDSIVTALMSADGGDTLELEAMLTQINRKSKSSRQTGRWGT*
Ga0075428_1020629442	3300006844	Populus Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGAWSCRPAPTP
Ga0075434_1013512481	3300006871	Populus Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRQSKSLRQTGRWGTGCHRPAA
Ga0068865_1009251471	3300006881	Miscanthus Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINR
Ga0105244_101846461	3300009036	Miscanthus Rhizosphere	TLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0105250_104420831	3300009092	Switchgrass Rhizosphere	EILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP*
Ga0111539_101613853	3300009094	Populus Rhizosphere	MIWRQREPTLKEMLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0111539_131140972	3300009094	Populus Rhizosphere	IGDPMIWRQRESTLREILSDPSVTALMSDGDVDPLELEAMLTHINMKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0105247_118067172	3300009101	Switchgrass Rhizosphere	MIWRQREPNLKEILSDPIVTALMSADGVDPLELEAMLTQINSKSKPPRQTGRWDIGCCRPAATHDAPAS*
Ga0111538_100805854	3300009156	Populus Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGAWSCRPAPTPTAALAPEAGTLAPERTPQNLAAER*
Ga0075423_129006971	3300009162	Populus Rhizosphere	PMIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0105241_100461082	3300009174	Corn Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDTLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP*
Ga0105237_112223692	3300009545	Corn Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDASVP*
Ga0105238_107666932	3300009551	Corn Rhizosphere	DPIVTALMSADGVDPVELQAMLTQINRRLESPHQTGRWGTWSCRPAPTHDAPVP*
Ga0105249_120273851	3300009553	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGACSCRPAPTPTAALAPEAGTLA
Ga0126305_110619081	3300010036	Serpentine Soil	MIWRQREPTLKEILSDSIVTTLMSADGVDPLELEAMLTQINRKSKSPRQTRRWGTWSCRPAPTHDAPVP*
Ga0126380_109968791	3300010043	Tropical Forest Soil	PSCSSWNCEPTIAEILSDSAVRAMMEADGVDPNELEAMLRRMAR*
Ga0105239_116239751	3300010375	Corn Rhizosphere	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINSKSKPPRQTGRWGIGCCRPAATHDAPAS*
Ga0134126_117395791	3300010396	Terrestrial Soil	CARPDESSILIGDPMIWRQREPTLKEILSDSIVTALMSADGGDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0134127_110298632	3300010399	Terrestrial Soil	MIWRQREPTLKEILSDSIVTALMSADGGDTLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDA
Ga0134122_101910252	3300010400	Terrestrial Soil	MIWRQREPTLKEILSDPIVTALMSADGVDPVELQAMLTQINRKSKSSRQTGRWGS*
Ga0150985_1146051761	3300012212	Avena Fatua Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTH
Ga0157289_101064822	3300012903	Soil	MIWRQREPTLKEILSDPIVTALMSADGVDPVELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0157289_101652372	3300012903	Soil	MIWRQREPTLKEILSDSIVTAMMAADGVDPHELEAMLQKIGRTSKSLHRARRWGA*
Ga0157283_101773392	3300012907	Soil	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINSKSKPP
Ga0162653_1000089233	3300012937	Soil	GDPMIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT*
Ga0162651_1000946402	3300012938	Soil	MIWRQREPTLKELLSDSIVTALMSADGVEPLELEAMLTQINRKSKSSRQTGRWGT*
Ga0164298_115268161	3300012955	Soil	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGAWSCRPAPNLTAA
Ga0164299_100422131	3300012958	Soil	ARPDESSILIGDPMIWRQREPTLKEILSDSIVTALMSADGGDTLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0164299_105010372	3300012958	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQ
Ga0164301_107993521	3300012960	Soil	DPIVTALMSADGVDPLELEAMLTQTNRKSKPPRQTGRWGTWCCRPAPTHDASVP*
Ga0164302_100568863	3300012961	Soil	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGACSCRPAPTPTAALAPDAGTLAPERTPQNLAAER*
Ga0164305_106767882	3300012989	Soil	MIWRQREPTLKEILSDPIVTALMSADGVDPVELEAMLT
Ga0163162_134164822	3300013306	Switchgrass Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINSKSKPPRQTGRWDIGCCRPAATHDAPAS*
Ga0157375_128127132	3300013308	Miscanthus Rhizosphere	IVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0163163_109351981	3300014325	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPV
Ga0157377_102050531	3300014745	Miscanthus Rhizosphere	PTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGA*
Ga0132256_1011276232	3300015372	Arabidopsis Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAML
Ga0132255_1031293362	3300015374	Arabidopsis Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLKLEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP*
Ga0190266_102259552	3300017965	Soil	MIWRQHEPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGGTSKAIRQKRRWGAWSCSPAPVIRHPVHRTGGA
Ga0184605_100200102	3300018027	Groundwater Sediment	MIWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHKAPSP
Ga0184634_100524102	3300018031	Groundwater Sediment	MIRRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT
Ga0184634_103055611	3300018031	Groundwater Sediment	MIWRQHEPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHHAPSP
Ga0184620_100479182	3300018051	Groundwater Sediment	MIWRQHEPTLKEILSDSIVTAVMEADGVDPDELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHKAPSP
Ga0184619_100609931	3300018061	Groundwater Sediment	MIWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWVAWSCSPAPVHKAPSP
Ga0184617_10701342	3300018066	Groundwater Sediment	MIWRQREPTLKEILSDSIVTALMSADGVDPFELEAMLTHINRKSKSPRQTGRWGTWSCRPAPTHDEPVP
Ga0184617_10820892	3300018066	Groundwater Sediment	MIWRQHEPTLKEILSDSIVTALMEADGVDPNELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAPRP
Ga0184611_10024953	3300018067	Groundwater Sediment	MIWRQHEPTLKEILSDSIVTALMEADAVDPDELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAPRP
Ga0184635_103265301	3300018072	Groundwater Sediment	MIWRQHEPTLKEILSDSIVTALMEADGVDPDELEAMLKKIGGTSKAIRQK
Ga0184624_100285921	3300018073	Groundwater Sediment	MIWRQHEPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWS
Ga0184640_101573682	3300018074	Groundwater Sediment	MIWRQREPTLKEILSDPIVTALMRADGVDPLELEAMLTRI
Ga0184640_104429822	3300018074	Groundwater Sediment	EPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT
Ga0184625_100827932	3300018081	Groundwater Sediment	MIWRQHEPTLKEILSDSIVTALMEADGVDPDELEAMLKKIGGTSKAIRQKRRWGAWSCSPAPVDQAPRP
Ga0184639_101861861	3300018082	Groundwater Sediment	DPIVTALMLADGVDPLELEAMLTRINRKSKSPRQTGRWGTWSCRPAPTHDAPVP
Ga0184639_105278442	3300018082	Groundwater Sediment	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQ
Ga0190272_117229441	3300018429	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT
Ga0190270_114035061	3300018469	Soil	ILSDSIVTALMSADGVDPLELEAMLTQINRKSKSPRQTGRWGIWSCRPAPTHDAPVP
Ga0184644_14679613	3300019269	Groundwater Sediment	MIWRWREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHKAPSP
Ga0173481_100446492	3300019356	Soil	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP
Ga0173481_102044142	3300019356	Soil	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGA
Ga0173482_106692872	3300019361	Soil	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGAWSCRPAPTPTAALAPEAGTLAPERTPQNLAAER
Ga0193729_10787623	3300019887	Soil	MIWHRREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHKAPSP
Ga0193731_10876312	3300020001	Soil	MIWRQREPTLKEILSDSIVTALMDADGVHPNELEAMLKKIGRTSKA
Ga0193731_11754781	3300020001	Soil	MIWHRREPTLKEILSDSIVTALMDADGVHPNELEAMLKKIGRTSKAVRQKRRWVAWSCSPAPVHKAPSP
Ga0193697_10099203	3300020005	Soil	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT
Ga0193697_10576101	3300020005	Soil	MIWRQHEPTLKEILSDSIVTALMEADGVDPDELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAPRP
Ga0193696_11098472	3300020016	Soil	MIWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHHAPSP
Ga0193699_100906372	3300021363	Soil	MIWHRREPTLKEILSDSIVTALMDADGVHPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHKAPSP
Ga0193699_103138771	3300021363	Soil	MIWRQREPTLKEILSDSIVTALMEADGVDPHELEA
Ga0224452_12575771	3300022534	Groundwater Sediment	MIWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASV
Ga0222623_100098082	3300022694	Groundwater Sediment	MIWRWREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTS
Ga0222622_101317952	3300022756	Groundwater Sediment	MIWRQHEPTLKEILSDSIVTALMEAYGVDPDELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAPRP
Ga0222622_105766871	3300022756	Groundwater Sediment	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSPRQTGRWGTWSCRPAPTHDAPVP
Ga0207656_101306122	3300025321	Corn Rhizosphere	MNSGVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP
Ga0207710_101280532	3300025900	Switchgrass Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP
Ga0207647_100139873	3300025904	Corn Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP
Ga0207671_104170041	3300025914	Corn Rhizosphere	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPV
Ga0207693_104884211	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VHCARPDESLILIGDPMIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP
Ga0207663_104164671	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP
Ga0207662_100088131	3300025918	Switchgrass Rhizosphere	TALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP
Ga0207657_100593553	3300025919	Corn Rhizosphere	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKPSRQTGRWGTWSCRPAPTHDAPVP
Ga0207650_106354572	3300025925	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP
Ga0207687_102629763	3300025927	Miscanthus Rhizosphere	IGDPMIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGA
Ga0207700_100099633	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDPLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTQDAPVP
Ga0207686_109598621	3300025934	Miscanthus Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGTWSC
Ga0207708_101587642	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRW
Ga0207641_112183091	3300026088	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDPLELEAML
Ga0207641_123705701	3300026088	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGACSCRPAPTPTAALAPEAGTLAPERTPQNLAAER
Ga0207676_113071111	3300026095	Switchgrass Rhizosphere	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRARRWGAWSCRP
Ga0207674_102417432	3300026116	Corn Rhizosphere	MIWRQREPTLKEILSDSIVTALMSADGGDPLELEAMLTQINRKSKS
Ga0208893_10030301	3300026857	Soil	IWRQREPTLKEILSDSIVTALMSADGGDTLELEAMLTQINRKSKSSRQTGRWGTWSCRPAPTHDAPVP
Ga0209488_103062383	3300027903	Vadose Zone Soil	MIWRRREPTLKEILSDSIVTALMEADGVDPDELEAMMKTIGRTSKAVRQKRRWGAWSCSRAPVDQAPSP
Ga0307293_100356672	3300028711	Soil	MIWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHRA
Ga0307303_100459871	3300028713	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSPRQTGRWGTWSCR
Ga0307298_100158321	3300028717	Soil	MIWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGR
Ga0307315_100290093	3300028721	Soil	EILSDSIVTALMEADGVDPNELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAPRP
Ga0307319_101030152	3300028722	Soil	MIWRQHEPTLKEILSDSIVTALMEADGVDPNELEAMLKKIGGTSKAIRQKRRWGAWSCSPAPVDQAPRP
Ga0307318_100043143	3300028744	Soil	MIWRQREPTLKEILSDSIVTALMEADGVDPDELEAMLKKIGGT
Ga0307316_100415973	3300028755	Soil	MIWRWREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHHAPSP
Ga0307320_101398481	3300028771	Soil	MRWYDRDPTLQEILSDPIFIDLMQADNVDPHELEAMLKEV
Ga0307282_100669612	3300028784	Soil	MIWRQREPTLKEILSDSIVTALMEADGVDPNELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAPRP
Ga0307299_100303491	3300028793	Soil	MIWRRREPTLKEILSDSIVTALMEADGVDPNELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAPRP
Ga0307299_100699561	3300028793	Soil	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKSKSPRQTGRWGTWSCRPAPTHDEPVP
Ga0307284_104868592	3300028799	Soil	IWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHKAPSP
Ga0307305_102228971	3300028807	Soil	MIWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRW
Ga0307312_111833621	3300028828	Soil	MIWRQREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKAVRQKRRWGAWSCSPASVHKAP
Ga0307286_100513452	3300028876	Soil	MIWRWREPTLKEILSDSIVTALMDADGVDPNELEAMLKKIGRTSKA
Ga0307300_100097462	3300028880	Soil	MIWRWREPTLKEILSDSIVTALMEADGVDPDELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAPRP
Ga0307495_100722451	3300031199	Soil	MIWRQHEPTLKEILSDSIVTALMEADGVDPDELEAMLKKIG
Ga0307496_100313682	3300031200	Soil	MIWRQHEPTLKEILSDSIVTALMEADRVDPDELEAMLKKIGGTSKAIRQERRWGAWSCSPAPVDQAP
Ga0310886_104586932	3300031562	Soil	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRK
Ga0310900_104744522	3300031908	Soil	MIWRQREPTLKEILSDSIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWDTWSCRPAPTHDAPVP
Ga0310906_102229331	3300032013	Soil	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEATLTQINRKSKSSRQTGRWGT
Ga0307472_1014110661	3300032205	Hardwood Forest Soil	MIWRQREPTLKEMLSDSIVTALMSADGVDPLELEAMLTQINKKSKSPRQTGRWGTW
Ga0310896_103105881	3300032211	Soil	MIWRQREPTLKEILSDPIVTALMSADGVDPLELEAMLTQINRKSKSSRQTGRWGT
Ga0247829_114551942	3300033550	Soil	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRASKSLHRARRWGA
Ga0364925_0409006_3_134	3300034147	Sediment	MIWRQREPTLKELLSDSIVTALMSADGVDPLELEAMLTQINRKS
Ga0373958_0220357_355_504	3300034819	Rhizosphere Soil	MIWRQREPTLKEILSDSIVTALMAADGVDPHELEAMLQKIGRTSKSLHRA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036786

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign