Metagenome / Metatranscriptome Family F036361

Basic Information
Family ID	F036361
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	44 residues
Representative Sequence	MREMIISELSQALHEIARGFAHFLPRLIVMLILAFVGWVIAYL
Number of Associated Samples	156
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.82 %
% of genes from short scaffolds (< 2000 bps)	93.53 %
Associated GOLD sequencing projects	147
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (95.882 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (24.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.235 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1cont_0013.00006880 2INPhiseqgaiiFebDRAFT_1042811281 3JGI1027J11758_128494382 4JGI12713J13577_10040562 5JGI20182J14882_1027381 6JGI12712J15308_100979151 7JGI12635J15846_103541821 8JGIcombinedJ26739_1004897271 9Ga0063455_1010180471 10Ga0062388_1021990502 11Ga0070714_1022995081 12Ga0070761_109456181 13Ga0070766_102650062 14Ga0070766_108490972 15Ga0066787_101459532 16Ga0075019_107734841 17Ga0075015_1004601412 18Ga0075030_1015088852 19Ga0075014_1002756072 20Ga0079219_103857591 21Ga0099793_103439442 22Ga0099795_101689981 23Ga0099827_115071981 24Ga0116112_12052761 25Ga0116112_12250041 26Ga0116121_11635941 27Ga0116106_12278232 28Ga0116132_10514962 29Ga0116224_101922291 30Ga0116227_107941591 31Ga0116131_12196561 32Ga0116223_103477981 33Ga0074044_100506143 34Ga0074044_103746391 35Ga0074044_108451121 36Ga0126350_105586671 37Ga0137388_115108292 38Ga0137383_107578472 39Ga0137399_106394191 40Ga0137384_111252092 41Ga0137396_103993942 42Ga0137419_115759261 43Ga0137404_121967721 44Ga0181518_104902232 45Ga0181532_101762071 46Ga0181535_102869311 47Ga0181526_102117051 48Ga0181526_105024131 49Ga0182018_100560153 50Ga0182015_101573621 51Ga0181525_108731042 52Ga0137420_13644866 53Ga0137403_112499852 54Ga0132256_1009286222 55Ga0182037_113430651 56Ga0187848_104852321 57Ga0187847_101764751 58Ga0187847_107983481 59Ga0187804_101104941 60Ga0187810_104949481 61Ga0187860_14120322 62Ga0187881_104676681 63Ga0187857_105321431 64Ga0187855_105374001 65Ga0187871_103533311 66Ga0187890_102331362 67Ga0187851_100185735 68Ga0187851_100397373 69Ga0187772_109777261 70Ga0193720_10487712 71Ga0193728_11451431 72Ga0210407_101580803 73Ga0210395_106813111 74Ga0210401_115833302 75Ga0210400_104727112 76Ga0210393_106511752 77Ga0210385_107084972 78Ga0210397_103776432 79Ga0210387_110088912 80Ga0210394_103568661 81Ga0210384_111261622 82Ga0210384_116266412 83Ga0210391_103500481 84Ga0210391_114883421 85Ga0210392_108346772 86Ga0210410_109415832 87Ga0210409_101205691 88Ga0126371_124014932 89Ga0224554_11101411 90Ga0224523_11231661 91Ga0224556_10613141 92Ga0208037_10913632 93Ga0208851_10663602 94Ga0209584_100053525 95Ga0207692_102688912 96Ga0207685_100515421 97Ga0207664_116208581 98Ga0209863_100317822 99Ga0209839_100237991 100Ga0257154_10339661 101Ga0209730_10368782 102Ga0209529_10016651 103Ga0209332_10509632 104Ga0209419_10179793 105Ga0209008_10215292 106Ga0209115_10254922 107Ga0209525_11283382 108Ga0209116_10587221 109Ga0209420_11306842 110Ga0209009_10367681 111Ga0209118_11459212 112Ga0209626_11656221 113Ga0208989_102402861 114Ga0209039_103632451 115Ga0209167_108064592 116Ga0209275_101058811 117Ga0209380_101785742 118Ga0209068_108991961 119Ga0209067_101934091 120Ga0137415_105107891 121Ga0302156_102660261 122Ga0302199_12330602 123Ga0302278_103710372 124Ga0302155_104945691 125Ga0222749_102255891 126Ga0311341_102470962 127Ga0311340_114098971 128Ga0311352_112963352 129Ga0311371_119703951 130Ga0311346_110279062 131Ga0311338_118015401 132Ga0311353_100260589 133Ga0311370_104102953 134Ga0302275_100716541 135Ga0311372_109802162 136Ga0311355_106559102 137Ga0316363_101853512 138Ga0311345_102706733 139Ga0265750_10733362 140Ga0265741_1074912 141Ga0170834_1019597031 142Ga0170834_1126578282 143Ga0170824_1181711031 144Ga0265339_103878492 145Ga0265339_105075991 146Ga0265331_101834302 147Ga0302318_103022912 148Ga0170818_1075796981 149Ga0302326_111541211 150Ga0310686_1104656502 151Ga0265342_107150371 152Ga0307476_103294552 153Ga0307474_111868092 154Ga0307469_101558013 155Ga0307475_101950163 156Ga0307475_102940631 157Ga0307475_103482471 158Ga0306925_107515772 159Ga0311367_106284032 160Ga0318562_108141741 161Ga0310911_103975081 162Ga0311301_106929042 163Ga0306920_1005585261 164Ga0310810_107998832 165Ga0326726_106585362 166Ga0310811_112170362 167Ga0316214_10246101 168Ga0316214_10511741 169Ga0334847_013431_2_124 170Ga0334792_144094_2_112
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1cont_0013.00006880 2INPhiseqgaiiFebDRAFT_1042811281 3JGI1027J11758_128494382 4JGI12713J13577_10040562 5JGI20182J14882_1027381 6JGI12712J15308_100979151 7Ga0070714_1022995081 8Ga0070766_108490972 9Ga0066787_101459532 10Ga0079219_103857591 11Ga0116121_11635941 12Ga0116106_12278232 13Ga0116132_10514962 14Ga0116227_107941591 15Ga0116131_12196561 16Ga0181525_108731042 17Ga0132256_1009286222 18Ga0187848_104852321 19Ga0187804_101104941 20Ga0187810_104949481 21Ga0187851_100185735 22Ga0187772_109777261 23Ga0193720_10487712 24Ga0210387_110088912 25Ga0210394_103568661 26Ga0210384_111261622 27Ga0126371_124014932 28Ga0209863_100317822 29Ga0209730_10368782 30Ga0209068_108991961 31Ga0302278_103710372 32Ga0311340_114098971 33Ga0306925_107515772 34Ga0310911_103975081 35Ga0306920_1005585261 36Ga0316214_10511741
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0126350_105586671 2cont_0013.00006880 3JGI1027J11758_128494382 4JGI12713J13577_10040562 5JGI12712J15308_100979151 6Ga0063455_1010180471 7Ga0070714_1022995081 8Ga0066787_101459532 9Ga0075019_107734841 10Ga0075030_1015088852 11Ga0075014_1002756072 12Ga0079219_103857591 13Ga0099793_103439442 14Ga0116121_11635941 15Ga0116132_10514962 16Ga0116227_107941591 17Ga0137404_121967721 18Ga0181532_101762071 19Ga0181526_105024131 20Ga0181525_108731042 21Ga0137420_13644866 22Ga0132256_1009286222 23Ga0182037_113430651 24Ga0187848_104852321 25Ga0187804_101104941 26Ga0187810_104949481 27Ga0187860_14120322 28Ga0187857_105321431 29Ga0187890_102331362 30Ga0187851_100185735 31Ga0187772_109777261 32Ga0193720_10487712 33Ga0210393_106511752 34Ga0210387_110088912 35Ga0210394_103568661 36Ga0210384_111261622 37Ga0210409_101205691 38Ga0126371_124014932 39Ga0207664_116208581 40Ga0209863_100317822 41Ga0257154_10339661 42Ga0209332_10509632 43Ga0209008_10215292 44Ga0209525_11283382 45Ga0209275_101058811 46Ga0209380_101785742 47Ga0209068_108991961 48Ga0302199_12330602 49Ga0302278_103710372 50Ga0302155_104945691 51Ga0222749_102255891 52Ga0311340_114098971 53Ga0311353_100260589 54Ga0311355_106559102 55Ga0316363_101853512 56Ga0265750_10733362 57Ga0170824_1181711031 58Ga0265339_105075991 59Ga0265331_101834302 60Ga0302326_111541211 61Ga0307474_111868092 62Ga0307475_101950163 63Ga0307475_102940631 64Ga0306925_107515772 65Ga0311367_106284032 66Ga0318562_108141741 67Ga0311301_106929042 68Ga0310810_107998832 69Ga0326726_106585362
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF16657	Malt_amylase_C	9.41
PF00535	Glycos_transf_2	0.59
PF00329	Complex1_30kDa	0.59
PF02446	Glyco_hydro_77	0.59
PF00133	tRNA-synt_1	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.59
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.59
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.59
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.59
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	0.59
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.59
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	0.59

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.88 %
Unclassified	root	N/A	4.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.88 %
Unclassified	root	N/A	4.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.88 %
Unclassified	root	N/A	4.12 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.76 %
Unclassified	root	N/A	4.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.12 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.59 %
Unclassified	root	N/A	4.12 %

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig117257	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104281128	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300000789\|JGI1027J11758_12849438	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300001151\|JGI12713J13577_1004056	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300001411\|JGI20182J14882_102738	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300001471\|JGI12712J15308_10097915	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300001593\|JGI12635J15846_10354182	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300002245\|JGIcombinedJ26739_100489727	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300004153\|Ga0063455_101018047	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300004635\|Ga0062388_102199050	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.59%
Environmental	Environmental	94.71%
Host-Associated	Host-Associated	4.71%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	20.00%
Modeled	Engineered → Modeled	0.59%
Plants	Host-Associated → Plants	4.71%
Terrestrial	Environmental → Terrestrial	74.71%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	16.47%
Peat	Environmental → Terrestrial → Peat	14.71%
Peat Moss	Host-Associated → Plants → Peat Moss	0.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%
Roots	Host-Associated → Plants → Roots	1.18%
Sediment	Environmental → Aquatic → Sediment	3.53%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.59%
Soil	Environmental → Terrestrial → Soil	60.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	15.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.53%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.18%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.59%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.29%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.18%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.35%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.18%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.59%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.59%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.53%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.18%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.18%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.53%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.59%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.29%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.18%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.47%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.12%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.35%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.35%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	1.18%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.12%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.53%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001411	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M

Showing 1 to 10 of 156 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0013.00006880	2166559005	Simulated	MREIIINELTQALQDLARGFAHYLPRLVVMLIIAFVGWMSPTY
INPhiseqgaiiFebDRAFT_1042811281	3300000364	Soil	MREIIITELTQASQELARGFAHYLPRMIVMLIIAFVGWVIAYLLK
JGI1027J11758_128494382	3300000789	Soil	MQEMIINELTQAVHDLARGFAHFLPRLIVMLILAFVGWLIAYLVKVTLRSIL
JGI12713J13577_10040562	3300001151	Forest Soil	MREMIVSELSQALHEMARGFAHLLPRIIVMLILAALGWVIAYVVKVVLRSILRL
JGI20182J14882_1027381	3300001411	Arctic Peat Soil	MREMIISELSQALYELARGFAHFLPRLIVMLILTFVGWVIAYVLRV
JGI12712J15308_100979151	3300001471	Forest Soil	MREMIISELSQAVQDLARGFAHYLPRFIVMLILGLAGWA
JGI12635J15846_103541821	3300001593	Forest Soil	MREMIISELSQALHEIVRGFAHFLPRLIVMLILAFVGWVIAYVAKVVLRS
JGIcombinedJ26739_1004897271	3300002245	Forest Soil	MREIIWAELTQATQEIVREFAHLLPRLIVMLIIAFAGWVIAYLLX
Ga0063455_1010180471	3300004153	Soil	MRDLIISELTQAVHDLARGFAHYLPRLIVMLILAILGWLIAYVVKIVLRSFLR
Ga0062388_1021990502	3300004635	Bog Forest Soil	MREMIISELSQALHDIARGFAHFLPRFIVMLILAAVGWVIAYVVKVV
Ga0070714_1022995081	3300005435	Agricultural Soil	MKEMIISELTQAVQELVRGFARFLPRFIVLVIIAFAGWLIAHLV
Ga0070761_109456181	3300005591	Soil	MREMIISELSQAMHELARGFAHYLPRLIVMLILAFAGWAVAYVA
Ga0070766_102650062	3300005921	Soil	MREMIISELTQALHELARGFAHFLPRLIVMLILAFLGWVLAYVAKVILRSILRLIK
Ga0070766_108490972	3300005921	Soil	MREMITSELVQALHELARGFAHFLPRLIVMLILAFV
Ga0066787_101459532	3300005950	Soil	MREMIISELSQALQEIARSFAHFLPRVIVMLILAVVGWLLAVVAKVTVRGILRLV
Ga0075019_107734841	3300006086	Watersheds	MREMIISELTQAVQDLARGFAHYLPRLIVMLILAFVGWLI
Ga0075015_1004601412	3300006102	Watersheds	MREIIITELTQALQELARGFAHYLPRLIVMLIIAF
Ga0075030_1015088852	3300006162	Watersheds	MREMIISELSQAVHELARGFAHYLPRLIVMLILAFAGWAIAYVVKVALRSILRLI
Ga0075014_1002756072	3300006174	Watersheds	MREMIVSELTQALHDLARGFAHYLPRLIVLLILAFLGWVIAYVVK
Ga0079219_103857591	3300006954	Agricultural Soil	MKSEGRMREIIISELTQASHELARTFAHYLPRLVVMIILALIGWAIAYLL
Ga0099793_103439442	3300007258	Vadose Zone Soil	MREIIVAELTQASQELARGFAHYLPRMIVMLIIAFVGWVLAYLFK
Ga0099795_101689981	3300007788	Vadose Zone Soil	MREMIISELSQALHELVRGFAHFLPRLIVMLILAFVGWVVA
Ga0099827_115071981	3300009090	Vadose Zone Soil	MREMIISELTQALHELARGFAHFLPRLIVMLILAFV
Ga0116112_12052761	3300009636	Peatland	MREMIISELSQALHEIARGFAHFLPRLIVIVILAFVG
Ga0116112_12250041	3300009636	Peatland	MREMIISELSQALHEIARGFAHFLPRLIVMLLLALVGWV
Ga0116121_11635941	3300009644	Peatland	MREMIINELSHSLQEIARSFAQFLPRLIVMLLFAILGWVIAYV
Ga0116106_12278232	3300009645	Peatland	MREMIISELSQAVQELAKGFAHYLPRLIVMLILAFAGWAIAYLVKIVL
Ga0116132_10514962	3300009646	Peatland	MREMIISELTQAMQELTRGFAHILPRIIVLVIIAFAGWVVAYFLKVFL
Ga0116224_101922291	3300009683	Peatlands Soil	MREMIISELSQAVHELARGFAHYLPRLIVMLILAFAGWAIAYVVKVALRSI
Ga0116227_107941591	3300009709	Host-Associated	MREMIMSELHQAVLELTRGFAHFLPRFIVLLIIAFAGWVVAYLLQIFLRSIL
Ga0116131_12196561	3300009760	Peatland	MREMIIRELNQSLHEIARGFAHFLPRLIVMLMFAFVGWL
Ga0116223_103477981	3300009839	Peatlands Soil	MREMIISELSQALHEIARDFAHFLPRLIVMLILAFVGWV
Ga0074044_100506143	3300010343	Bog Forest Soil	MREMIISELSQALHEIARGFAHFLPRLIVIVILAFVGWVI
Ga0074044_103746391	3300010343	Bog Forest Soil	MREMIISELSQALHEMARDFAHFLPRVIVMLILALVGWVIAYV
Ga0074044_108451121	3300010343	Bog Forest Soil	MREMIISELTQAMEELSRGFAHILPRIIVLVIIAFAGW
Ga0126350_105586671	3300010880	Boreal Forest Soil	MREMIISELSQALHEIARGFAHFLPRLIVMLILAFVGWVIAYL
Ga0137388_115108292	3300012189	Vadose Zone Soil	MREMIISELSQALHELVRGFAHFLPRLIVMLILALVGWVIAY
Ga0137383_107578472	3300012199	Vadose Zone Soil	MREMIISELTQAMHELARGFAHYLPRLIVMLILAFVGWAIAYVVK
Ga0137399_106394191	3300012203	Vadose Zone Soil	MRDMIVSELSQAMHELARGFAHFLPRLIVMLVLAFVG
Ga0137384_111252092	3300012357	Vadose Zone Soil	MREMIISELSQAVHDLARGFAHYLPRLIVMLVIAFA
Ga0137396_103993942	3300012918	Vadose Zone Soil	MREMIISELSQALHELVRGFAHFLPRLIVMLILAFLGWVIA
Ga0137419_115759261	3300012925	Vadose Zone Soil	MREMIISELSQALHELVRGFAHFLPRLIVMLILAFVGWVIAY
Ga0137404_121967721	3300012929	Vadose Zone Soil	MREIIIAELTQASHDLARGFAHYLPRMIVMLIIAFIGWVIAYLLKVVV
Ga0181518_104902232	3300014156	Bog	MREMIISELSQALHEIARNFAHFLPRLIVMLILAFA
Ga0181532_101762071	3300014164	Bog	MREMIISELSHARHDIARVFAHFLPRLIVMLILAVVGWVIAYVAKVV
Ga0181535_102869311	3300014199	Bog	MREMIISELSQALHEIARDFAHFLPRLIVMLILAV
Ga0181526_102117051	3300014200	Bog	MREMIISELSQALHEIARDFAHFLPRLIVMLILAVVG
Ga0181526_105024131	3300014200	Bog	MREMIINELSQSLHEIARGFAHFLPRLIVMLMFAFVGWLIA
Ga0182018_100560153	3300014489	Palsa	MREMIVSELTQAVHELARGFAHYLPRLIVMLIIAFAGWAVAY
Ga0182015_101573621	3300014495	Palsa	MREMIISELSQALQELARGFAHYLPRLIVMLILAFLG
Ga0181525_108731042	3300014654	Bog	MREMIVSELGQALQDIARSFAHFLPRLIVMLVLALVGWIIAYVV
Ga0137420_13644866	3300015054	Vadose Zone Soil	MREMIISELSQALHEFARGFAHYLPRLIVMLILAFGAG*
Ga0137403_112499852	3300015264	Vadose Zone Soil	MREMIISELSQALHEMTRGFAHFLPRLIVMLILAFVGWVIAYV
Ga0132256_1009286222	3300015372	Arabidopsis Rhizosphere	MREMIISELSQAVHDLARGFAHYLPRLIVLLIFAIVGWLIAY
Ga0182037_113430651	3300016404	Soil	MRDMIIGELTQAMQEFIRGFAHILPRLIVLLIIACVGWAIAYFVKLFL
Ga0187848_104852321	3300017935	Peatland	MREMIISELSHAVHEMARGFAHFLPRLVVTLILAFGGWVIAYVVKAVLRS
Ga0187847_101764751	3300017948	Peatland	MREMIISELSQALHEIARDFAHFLPRLIVMLILAVVGWVIAYVAKVVLRSFL
Ga0187847_107983481	3300017948	Peatland	MREMITSELIQALHELARGFAHFLPRLIVMLILAFVGWVIAYVVKV
Ga0187804_101104941	3300018006	Freshwater Sediment	MWEIIITELTQVLQGLASGFAHYVPRLAVMLIIAFIG
Ga0187810_104949481	3300018012	Freshwater Sediment	MGTMREMIISELSLALHELKGGFAHFLPRLIVMLILAFLGWVVASVAKV
Ga0187860_14120322	3300018014	Peatland	MREMIISELSQALHEIARSLAHFLPRVIVMLILALVGWVFAY
Ga0187881_104676681	3300018024	Peatland	MREMIVSELTQAVHELARGFAHYLPRLIVMLIIAFAG
Ga0187857_105321431	3300018026	Peatland	MREMIIRELNQSLHEIARGFAHFLPRLIVMLLLALVGWV
Ga0187855_105374001	3300018038	Peatland	MREMIISELSQAVHEMARGFAHFLPRLVVTLILAFG
Ga0187871_103533311	3300018042	Peatland	MREMIISELSQALHEMARGFAHFLPRVIVMLILAVGGWVIA
Ga0187890_102331362	3300018044	Peatland	MREMIISELSQALHEIARGFSHFLPLLIVIVILAFVGWVIAYV
Ga0187851_100185735	3300018046	Peatland	MWKMIVSELMQAMQELARSFAHILPRIIVVVIMALVGWVVAYLTKV
Ga0187851_100397373	3300018046	Peatland	MREMIISELSQALHEMARGFAHFLPRLIVMLILAFAGWVIAYAV
Ga0187772_109777261	3300018085	Tropical Peatland	MQEVVVNEPMRDIIVNELTQALHEMGREFAHYVPRLIVMLIIAFAGWLI
Ga0193720_10487712	3300019868	Soil	MREMIVNELTQAMHEIIRDVAHFLPRLIVMLVIALVG
Ga0193728_11451431	3300019890	Soil	MRDMIVSELSQAMHELARGFAHFLPRLIVMLLLAFVGWVIAYLA
Ga0210407_101580803	3300020579	Soil	MREMIISELSQALHELVRGFAHFLPRLIVMVILAFVG
Ga0210395_106813111	3300020582	Soil	MREMIISELTQAVHDLARGFAHYLPRLIVILILAFAGWLIAYVVKVI
Ga0210401_115833302	3300020583	Soil	MREMIVNELTQAVQDLARGFAHYLPRLIVMLILAFAGW
Ga0210400_104727112	3300021170	Soil	MREMIVNELTQAVQDLARGFAHYLPRLIVMLILAFAG
Ga0210393_106511752	3300021401	Soil	MREMIVSELTQAAHELAKGFAHFLPRLIVMLILAFVGWVIAYLAKV
Ga0210385_107084972	3300021402	Soil	MREMIISELMQAVQELARGFARFLPRFVVLVIIAFVGW
Ga0210397_103776432	3300021403	Soil	MREMITSELSQAVQDLARGFAHYLPRLIVMLVIAFAG
Ga0210387_110088912	3300021405	Soil	MRELIIAELTQALQELARGFAYYSPRLVVLLIIALVGWVI
Ga0210394_103568661	3300021420	Soil	MREMIMSELTQAYHEFGRELAHLLPRLIEMLIIVLL
Ga0210384_111261622	3300021432	Soil	MWKMINSELSQALRELVRGFAHFLPRLIVMLILAFVGWLIA
Ga0210384_116266412	3300021432	Soil	MREMIISELSQAVHDLARGFAHYLPRLIVMLVIAFAGWLIAY
Ga0210391_103500481	3300021433	Soil	MREMIISELSQAMHELARGFAHYLPRLIVMLILAFAGWAVAYVAK
Ga0210391_114883421	3300021433	Soil	MREMIISELTQALHELARDFAHFLPRLIVMLILAFLGWLIA
Ga0210392_108346772	3300021475	Soil	MREMIISELTQAMQDLARGFAHYLPRLLVMLILAFLGWLVAY
Ga0210410_109415832	3300021479	Soil	MREMIISELSQALHEIARGFAHLLPRLIVMLILAILGWVIAYVVKVVLRSI
Ga0210409_101205691	3300021559	Soil	MRDMIVSELSQAMHELARGFAHFLPRLIVMLILAFVGWVIAYIA
Ga0126371_124014932	3300021560	Tropical Forest Soil	MHEMRELIMTELSQAMQEMLRSAAHLLPRLIVMLIIV
Ga0224554_11101411	3300023068	Soil	MREMIISELSQSLHEIARGFAHFLPRFIVMLMFAFVGW
Ga0224523_11231661	3300024238	Soil	MREMIISELSQALHEIAGSFAHFLPRLIVMLILAFLGWVI
Ga0224556_10613141	3300024295	Soil	MREMIVEELSQAMHELARGFAHYLPRLIVMLILGFAGWAFAYIVKLVLRNIL
Ga0208037_10913632	3300025448	Peatland	MRELIISELSQALHEIARGFAHFLPRLIVMLILAFVGWVIAYVVK
Ga0208851_10663602	3300025461	Arctic Peat Soil	MREMIISELSQALHELARGFAHFLPRLIVMLILTFVGWVIAYVL
Ga0209584_100053525	3300025878	Arctic Peat Soil	MREMIISELSQALYELARGFAHFLPRLIVMLILTFVGWVIAYVLRVA
Ga0207692_102688912	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MREMIISELSQAIHDLARGFAHYLPRLIVMLILAFLGWAIAY
Ga0207685_100515421	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MREMIISELSQAIHDLARGFAHYLPRLIVMLILAFLGWAI
Ga0207664_116208581	3300025929	Agricultural Soil	MREMIIGELTQAVHDLARGFAHYLPRLIVMLILVLAGWLIAYIAKVILRSI
Ga0209863_100317822	3300026281	Prmafrost Soil	MREMIISELTRAMDELARGFAHFLPRLIVMLILGFVGWVIASIVKVALRSLLRLI
Ga0209839_100237991	3300026294	Soil	MREMIISELSQAVHDLARGFAHYLPRLIVMLILAFIG
Ga0257154_10339661	3300026467	Soil	MREMIISELTQALHELARDFAHFLPRLIVMLILAFLGWVIAYVAKVVL
Ga0209730_10368782	3300027034	Forest Soil	MREMIIGELTQALHELARDFAHFLPRLIVMLILALLGWVIAFIARVVLR
Ga0209529_10016651	3300027334	Forest Soil	MREMIVSELSQALHEMARGFAHLLPRIIVMLILAALGWVIAYVVKVVLRSIL
Ga0209332_10509632	3300027439	Forest Soil	MREMIVSELTQALHEVARGFAHYLPRLIVMLILAFMGWVIAYLVKVILRSILQFMK
Ga0209419_10179793	3300027537	Forest Soil	MREMIIGELTQALHELARDFAHFLPRLIVMLILAFLGWVIAYVAKVVLRSLLRL
Ga0209008_10215292	3300027545	Forest Soil	MREMIISELSQALQELARGFAHYLPRLIVMLILAFLGWVFAYVVKIVLRSILRLIR
Ga0209115_10254922	3300027567	Forest Soil	MREMIISELTQAMHDLARGFAHYLPRLIVMLILAFVGWLIA
Ga0209525_11283382	3300027575	Forest Soil	MREMIISELSQALHDIARGFAHFLPRLIVLLILALLGWVIAYAIKAVLRSA
Ga0209116_10587221	3300027590	Forest Soil	MREMIISELIQALHDLARGFAHFLPRLIVMLILAFAGWVIAYVV
Ga0209420_11306842	3300027648	Forest Soil	MREMIVSELSQALQDIARSFAHFLPRLIVMLVLAI
Ga0209009_10367681	3300027667	Forest Soil	MREMIISELTEALHELARDFAHFLPRLIVMLILAFLGWV
Ga0209118_11459212	3300027674	Forest Soil	MREMIISELSQALQELARGFAHYLPRLIVMLILAFLGWVFAYVVKTV
Ga0209626_11656221	3300027684	Forest Soil	MREMIISELSQALHELVRGFAHFLPRLIVMLILAFV
Ga0208989_102402861	3300027738	Forest Soil	MRDMIVSELSQAMHELARGFAHFLPRLIVMLILAFVGWVIAYVA
Ga0209039_103632451	3300027825	Bog Forest Soil	MREMIISELTQAMLELTRGFAHILPRIIVLVIIAFVGWVVAYL
Ga0209167_108064592	3300027867	Surface Soil	MREMIISELSQALHEIARDFAHFLPRLIVMLILALVGWIIAYLAKVALRSILRLV
Ga0209275_101058811	3300027884	Soil	MREIIWAELTQATQEIVREFAHLLPRLIVMLIIAFAGWVIAYLLKWIL
Ga0209380_101785742	3300027889	Soil	MREMIISELMQAVQELARGFARFLPRFVVLVIIAFVGWVI
Ga0209068_108991961	3300027894	Watersheds	MREMIFNELSEAWHELARGFAHFIPRLIEMLVLAFLGWLIAYMLKVVLRGILR
Ga0209067_101934091	3300027898	Watersheds	MREMIVNELTQAVQDLARGFAHYLPRLIVMLILAFVGWLIAY
Ga0137415_105107891	3300028536	Vadose Zone Soil	MREMIISELTQALHELAREFAHFLPRLIVMLILAFLGWVIAYIAKVV
Ga0302156_102660261	3300028748	Bog	MREMIISELSQALHEMARGFAHFLPRLIVMLILAFAGWVIAYVVKA
Ga0302199_12330602	3300028860	Bog	MQEMIVSELSQAMHDIARDFAHFLPRLIVMLIIALA
Ga0302278_103710372	3300028866	Bog	MREMIVGELMQAMHDIAHGFAHFLPRFIVMVIVAVAGWLIAYVVKVL
Ga0302155_104945691	3300028874	Bog	MREMIVEELSQAMHELARGFAHYLPRLIVMLILGFAGWAFAYIVKLVLRSILRLI
Ga0222749_102255891	3300029636	Soil	MREMIVSELSQALREIARGFAHLLPRVIVMLILASAGWVIAYAAKAVLRSILRLVKFDKL
Ga0311341_102470962	3300029908	Bog	MREMIVEELSQAMHELARGFAHYLPRLIVMLILGFA
Ga0311340_114098971	3300029943	Palsa	MREMIISELSEALHEIAKGFAHFLPRVLVMLIFAVLGWLIASVAKVILR
Ga0311352_112963352	3300029944	Palsa	MREMIISELTQAMQEIIRGFAHILPRIIVLVIIAFVGWVVAYFL
Ga0311371_119703951	3300029951	Palsa	MREMIISELSQAVQDLARGFAHYLPRLIVMLVIALAGWLIAY
Ga0311346_110279062	3300029952	Bog	MREMIMSELHQAVLELTRGFAHFLPRFIVLLIIAFAGWVV
Ga0311338_118015401	3300030007	Palsa	MREMIISELSQAVQDLARGFAHYLPRLIVMLVIALAGWLIA
Ga0311353_100260589	3300030399	Palsa	MREMIISELSQALQEIARGFAHYLPRLIVMLILAAVGWVIAFVA
Ga0311370_104102953	3300030503	Palsa	MREMIISELIQALHDLARGFAHFLPRLIVMLILAFAGWVIAYVVKVVLRS
Ga0302275_100716541	3300030518	Bog	MREMIVGELMQAMHDIAHGFAHFLPRFIVMVIVAVAGWLIAYVVKVLLRSILRLVRFD
Ga0311372_109802162	3300030520	Palsa	MREMIISELTQAMQEIIRGFAHILPRIIVLVIIAFVGWV
Ga0311355_106559102	3300030580	Palsa	MREMIISELSQAVQDLARGFAHYLPRLIVMLVIALAGWLIAYVIQVV
Ga0316363_101853512	3300030659	Peatlands Soil	MREMIISELSQALHEIARDFAHFLPRLIVMLILALAGWAIAYVVKA
Ga0311345_102706733	3300030688	Bog	MREMIVGELMQAMHDIAHGFAHFLPRFIVMVIVAVAGWLIAYVVKVLLRSILR
Ga0265750_10733362	3300030813	Soil	MKEMIVSELSQALHELARGFAHYLPRLIVMLILAFAGWAVAYLVKVILRSLL
Ga0265741_1074912	3300030814	Soil	MREMIISELTQAMQDLARGFAHYLPRLIVMLILAFA
Ga0170834_1019597031	3300031057	Forest Soil	MREMIISELSQALHEIARGFAHFLPRLIVMVVLTFVGWVTAYLIKAVL
Ga0170834_1126578282	3300031057	Forest Soil	MREMIISELTQAMQDLARGFAHYLPRLLVMLILAFLGWLVA
Ga0170824_1181711031	3300031231	Forest Soil	MREMIISELTQAMHDLARGFAHYLPRLIVMLIFAFVGWAIGYVVKA
Ga0265339_103878492	3300031249	Rhizosphere	MREMIISELTQAVQDLARGFAHYLPRLIVMLILAF
Ga0265339_105075991	3300031249	Rhizosphere	MREMIISELSQALHDIARGFAHYLPRIIVMLILALV
Ga0265331_101834302	3300031250	Rhizosphere	MREIITNELSRALQDLARGFAHYLPRVVVMLIIAFIGWAIAYL
Ga0302318_103022912	3300031258	Bog	MREMIISELSQALHEMARGFAHFLPRLIVMLILAFAGWVIAYVVKAVLR
Ga0170818_1075796981	3300031474	Forest Soil	MIISELTQAMHDLARGFAHYLPRLIVMLIFAFVGWAIGYV
Ga0302326_111541211	3300031525	Palsa	MREMIISELSQALLELRMGFAHYLPRLIVMLILALAGWAIAYAVKVILRSILR
Ga0310686_1104656502	3300031708	Soil	MREMIVSELSQALHELARGFAHFLPRLIVMLILAFVGWVIAYVVKVVLHSI
Ga0265342_107150371	3300031712	Rhizosphere	MRDMIISELTQALHELARGFAHYLPRLIVMLILAFLGWVIAYVVKVVLRS
Ga0307476_103294552	3300031715	Hardwood Forest Soil	MREMIVSELSQALHEMARGFAHFLPRIIVMLILAALGWV
Ga0307474_111868092	3300031718	Hardwood Forest Soil	MREMIISELTQAMQDLARGFAHYLPRLLVMLILAFLGWLVAYLVKVILRSI
Ga0307469_101558013	3300031720	Hardwood Forest Soil	MREMIISELTQALHELARDFAHFLPRLIVMLILAFLGWVIAYVAKVVLRSILRL
Ga0307475_101950163	3300031754	Hardwood Forest Soil	MREMIISELTQALHDLARGFAHFLPRLIVMLILAFVGWVIAFI
Ga0307475_102940631	3300031754	Hardwood Forest Soil	MREIIITELTQAFQDLVRGFAHYLPRLIVMLIIALVGWMI
Ga0307475_103482471	3300031754	Hardwood Forest Soil	MRDMIVSELSQAMHELARGFAHFLPRLIVMLILAFVGWVIAYIAKILLRSIL
Ga0306925_107515772	3300031890	Soil	MREIIVTELTQALQELLRAFAHYLPRLIVMLIIAFLGWL
Ga0311367_106284032	3300031918	Fen	MREMIMSELSQALYELARGFAHFLPRLIVMLILMSVG
Ga0318562_108141741	3300032008	Soil	MRDLIISELTQALHDIARRFAHFLPRLIVMLILAMLGWVIAYVVK
Ga0310911_103975081	3300032035	Soil	MRDLIISELTQALHDIARRFAHFLPRLIVMLILAMLGWV
Ga0311301_106929042	3300032160	Peatlands Soil	MREIIITELTQALQELARGFAHYLPRLIVMLIIAFSGWVVAYLLK
Ga0306920_1005585261	3300032261	Soil	MREIIITELTQAFQDLVRGFAHYLPRLIVMLMIAFV
Ga0310810_107998832	3300033412	Soil	MREIIIAELTQAWQELARGFAHYLPRLIVMLIIAFVGWAIAYLL
Ga0326726_106585362	3300033433	Peat Soil	MWEIIIAELTQAVQELARGFAHYLPRLIVMLIIAFLGWVIACLLKVLARSI
Ga0310811_112170362	3300033475	Soil	MREMIIGELTQAVHDLARGFAHYLPRLIVMLILVLAGWLI
Ga0316214_10246101	3300033545	Roots	MREMIISELSQAVHDLARGFAHYLPRLIVMLVIACVGWLIAYAVKVILR
Ga0316214_10511741	3300033545	Roots	METVVSEVIMRQMIIDELTQAMQELTRGFAHILPRIIVLVIIAFAGWVVAYL
Ga0334847_013431_2_124	3300033826	Soil	MREMIISELSQALHEIARGFAHFLPRLIVMLILVFVGWVIA
Ga0334792_144094_2_112	3300033888	Soil	MREMIISELSQALHEIARSFAHFLPRLIVMLILALVG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036361

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences