NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F035902

Metagenome / Metatranscriptome Family F035902

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F035902
Family Type Metagenome / Metatranscriptome
Number of Sequences 171
Average Sequence Length 61 residues
Representative Sequence TAEEISYWQDLDRLAAEAEARGSGPILYGDPNQGEGHVVHIAHVGSARLNLRWARDLGLV
Number of Associated Samples 149
Number of Associated Scaffolds 171

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.60 %
% of genes near scaffold ends (potentially truncated) 97.08 %
% of genes from short scaffolds (< 2000 bps) 92.40 %
Associated GOLD sequencing projects 143
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (52.047 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(9.357 % of family members)
Environment Ontology (ENVO) Unclassified
(23.977 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.351 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.32%    β-sheet: 6.82%    Coil/Unstructured: 48.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.1.13.1: Malate synthase Gd5vfba_5vfb0.67199
d.92.1.0: automated matchesd3hoaa_3hoa0.605
d.142.2.2: Adenylation domain of NAD+-dependent DNA ligased3jsla_3jsl0.60457
e.78.1.1: DNA gyrase B, C-terminal domaind3m4ia_3m4i0.60109
a.4.5.28: MarR-like transcriptional regulatorsd1hsja11hsj0.601


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 171 Family Scaffolds
PF04909Amidohydro_2 13.45
PF02738MoCoBD_1 5.85
PF07729FCD 3.51
PF00501AMP-binding 3.51
PF09991DUF2232 2.34
PF01053Cys_Met_Meta_PP 2.34
PF12680SnoaL_2 1.75
PF05721PhyH 1.75
PF13579Glyco_trans_4_4 1.75
PF02861Clp_N 1.75
PF01987AIM24 1.75
PF13439Glyco_transf_4 1.17
PF03683UPF0175 1.17
PF07690MFS_1 1.17
PF00528BPD_transp_1 1.17
PF06912DUF1275 1.17
PF01734Patatin 1.17
PF07287AtuA 1.17
PF13561adh_short_C2 1.17
PF01124MAPEG 1.17
PF13193AMP-binding_C 0.58
PF08240ADH_N 0.58
PF07883Cupin_2 0.58
PF08241Methyltransf_11 0.58
PF07087DUF1353 0.58
PF13649Methyltransf_25 0.58
PF13936HTH_38 0.58
PF00701DHDPS 0.58
PF02590SPOUT_MTase 0.58
PF03328HpcH_HpaI 0.58
PF01061ABC2_membrane 0.58
PF01590GAF 0.58
PF00005ABC_tran 0.58
PF00766ETF_alpha 0.58
PF13476AAA_23 0.58
PF14330DUF4387 0.58
PF12802MarR_2 0.58
PF04199Cyclase 0.58
PF08712Nfu_N 0.58
PF00206Lyase_1 0.58
PF13191AAA_16 0.58

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 171 Family Scaffolds
COG2186DNA-binding transcriptional regulator, FadR familyTranscription [K] 3.51
COG1802DNA-binding transcriptional regulator, GntR familyTranscription [K] 3.51
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 2.34
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 2.34
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 2.34
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 2.34
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 2.34
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 2.34
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 2.34
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 2.34
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 2.34
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 2.34
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 2.34
COG5285Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) familySecondary metabolites biosynthesis, transport and catabolism [Q] 1.75
COG2013AIM24 protein, required for mitochondrial respirationEnergy production and conversion [C] 1.75
COG0542ATP-dependent Clp protease, ATP-binding subunit ClpAPosttranslational modification, protein turnover, chaperones [O] 1.75
COG03294-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyaseCell wall/membrane/envelope biogenesis [M] 1.17
COG2886Predicted antitoxin, contains HTH domainGeneral function prediction only [R] 1.17
COG3619Uncharacterized membrane protein YoaK, UPF0700 familyFunction unknown [S] 1.17
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 1.17
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 1.17
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 1.17
COG0469Pyruvate kinaseCarbohydrate transport and metabolism [G] 0.58
COG1878Kynurenine formamidaseAmino acid transport and metabolism [E] 0.58
COG2025Electron transfer flavoprotein, alpha subunit FixBEnergy production and conversion [C] 0.58
COG2301Citrate lyase beta subunitCarbohydrate transport and metabolism [G] 0.58
COG38362-keto-3-deoxy-L-rhamnonate aldolase RhmACarbohydrate transport and metabolism [G] 0.58
COG157623S rRNA pseudoU1915 N3-methylase RlmHTranslation, ribosomal structure and biogenesis [J] 0.58


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.63 %
UnclassifiedrootN/A47.37 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2032320002|FACENCE_FW6223E01BJZ0JAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium558Open in IMG/M
2170459015|G14TP7Y02G416YNot Available696Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_104965647Not Available566Open in IMG/M
3300001408|JGI20206J14855_1055215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria569Open in IMG/M
3300002568|C688J35102_117965841All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300003987|Ga0055471_10237049Not Available576Open in IMG/M
3300004030|Ga0055444_10141544Not Available865Open in IMG/M
3300004114|Ga0062593_100445769All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300005163|Ga0066823_10130613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae541Open in IMG/M
3300005217|Ga0069005_10019239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis camponoti1227Open in IMG/M
3300005332|Ga0066388_100161405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2832Open in IMG/M
3300005332|Ga0066388_104002356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces751Open in IMG/M
3300005332|Ga0066388_107250924Not Available557Open in IMG/M
3300005340|Ga0070689_102113453Not Available516Open in IMG/M
3300005353|Ga0070669_100795777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium803Open in IMG/M
3300005354|Ga0070675_102054778All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005364|Ga0070673_101924346Not Available561Open in IMG/M
3300005366|Ga0070659_100584737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia958Open in IMG/M
3300005367|Ga0070667_100336814Not Available1364Open in IMG/M
3300005548|Ga0070665_100580360Not Available1134Open in IMG/M
3300005555|Ga0066692_10707226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium624Open in IMG/M
3300005563|Ga0068855_100977185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21891Open in IMG/M
3300005618|Ga0068864_100699801All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300005764|Ga0066903_106993306Not Available585Open in IMG/M
3300005994|Ga0066789_10059758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1660Open in IMG/M
3300005994|Ga0066789_10215946Not Available807Open in IMG/M
3300006042|Ga0075368_10377231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia620Open in IMG/M
3300006047|Ga0075024_100478214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium649Open in IMG/M
3300006048|Ga0075363_100906159Not Available540Open in IMG/M
3300006051|Ga0075364_10523578Not Available810Open in IMG/M
3300006102|Ga0075015_100050774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1963Open in IMG/M
3300006173|Ga0070716_101111784Not Available631Open in IMG/M
3300006176|Ga0070765_101661854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria600Open in IMG/M
3300006178|Ga0075367_10914507All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300006186|Ga0075369_10404050Not Available644Open in IMG/M
3300006755|Ga0079222_10200384Not Available1200Open in IMG/M
3300006804|Ga0079221_11274148Not Available576Open in IMG/M
3300006804|Ga0079221_11291316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300006876|Ga0079217_11703601Not Available507Open in IMG/M
3300006918|Ga0079216_11508261Not Available563Open in IMG/M
3300009093|Ga0105240_11737169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas vulcanisoli651Open in IMG/M
3300009094|Ga0111539_10631770Not Available1247Open in IMG/M
3300009137|Ga0066709_103160873Not Available601Open in IMG/M
3300009148|Ga0105243_12668540All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300009153|Ga0105094_10782975Not Available560Open in IMG/M
3300009520|Ga0116214_1203741Not Available745Open in IMG/M
3300009551|Ga0105238_10214398All Organisms → cellular organisms → Bacteria1902Open in IMG/M
3300009553|Ga0105249_11562495All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300009698|Ga0116216_10074473Not Available2087Open in IMG/M
3300009700|Ga0116217_10560346Not Available714Open in IMG/M
3300009762|Ga0116130_1278655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria533Open in IMG/M
3300009824|Ga0116219_10020650All Organisms → cellular organisms → Bacteria4059Open in IMG/M
3300009824|Ga0116219_10556421Not Available632Open in IMG/M
3300009840|Ga0126313_10345380Not Available1171Open in IMG/M
3300010041|Ga0126312_10660231Not Available754Open in IMG/M
3300010044|Ga0126310_10666415All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300010166|Ga0126306_10294761Not Available1248Open in IMG/M
3300010361|Ga0126378_10444124All Organisms → cellular organisms → Bacteria1411Open in IMG/M
3300010362|Ga0126377_12795921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium562Open in IMG/M
3300010398|Ga0126383_13448818Not Available516Open in IMG/M
3300010430|Ga0118733_109212538Not Available508Open in IMG/M
3300010866|Ga0126344_1228328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia520Open in IMG/M
3300012896|Ga0157303_10182062Not Available591Open in IMG/M
3300012908|Ga0157286_10479885Not Available500Open in IMG/M
3300012924|Ga0137413_11242210Not Available596Open in IMG/M
3300012960|Ga0164301_10830103All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300012961|Ga0164302_11441215Not Available564Open in IMG/M
3300013308|Ga0157375_13173857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300014162|Ga0181538_10110009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1614Open in IMG/M
3300014325|Ga0163163_11653671All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300014325|Ga0163163_12318034Not Available596Open in IMG/M
3300014501|Ga0182024_10490613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1564Open in IMG/M
3300014501|Ga0182024_12487354Not Available559Open in IMG/M
3300015200|Ga0173480_10841736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium590Open in IMG/M
3300015203|Ga0167650_1136006All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300015245|Ga0137409_11346178Not Available558Open in IMG/M
3300015371|Ga0132258_10031422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11874Open in IMG/M
3300016387|Ga0182040_10896166Not Available735Open in IMG/M
3300016387|Ga0182040_11711100Not Available537Open in IMG/M
3300016422|Ga0182039_10937259Not Available774Open in IMG/M
3300016422|Ga0182039_11692100Not Available579Open in IMG/M
3300016422|Ga0182039_11929775Not Available542Open in IMG/M
3300016747|Ga0182078_10393482Not Available569Open in IMG/M
3300017927|Ga0187824_10165919Not Available738Open in IMG/M
3300017943|Ga0187819_10334416Not Available877Open in IMG/M
3300017955|Ga0187817_10426136Not Available846Open in IMG/M
3300017959|Ga0187779_10459404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria838Open in IMG/M
3300017965|Ga0190266_10792224All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300018016|Ga0187880_1152695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1083Open in IMG/M
3300018025|Ga0187885_10085064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1556Open in IMG/M
3300018026|Ga0187857_10173314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1016Open in IMG/M
3300018043|Ga0187887_10924170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300018476|Ga0190274_12424202All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300018476|Ga0190274_12884984Not Available576Open in IMG/M
3300018481|Ga0190271_11919602Not Available702Open in IMG/M
3300018482|Ga0066669_11371525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium640Open in IMG/M
3300018920|Ga0190273_11548094Not Available589Open in IMG/M
3300020229|Ga0194042_1041791Not Available1210Open in IMG/M
3300020583|Ga0210401_10540276Not Available1028Open in IMG/M
3300021401|Ga0210393_10254449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1425Open in IMG/M
3300021406|Ga0210386_11178785Not Available648Open in IMG/M
3300025898|Ga0207692_10701813Not Available657Open in IMG/M
3300025913|Ga0207695_10735496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae867Open in IMG/M
3300025913|Ga0207695_10916136All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas vulcanisoli756Open in IMG/M
3300025918|Ga0207662_11172972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300025919|Ga0207657_10957506All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300025931|Ga0207644_11671654Not Available534Open in IMG/M
3300025944|Ga0207661_10239437All Organisms → cellular organisms → Bacteria → Terrabacteria group1610Open in IMG/M
3300025944|Ga0207661_11283539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens673Open in IMG/M
3300025949|Ga0207667_11005650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas vulcanisoli821Open in IMG/M
3300025960|Ga0207651_11849357Not Available543Open in IMG/M
3300025972|Ga0207668_10715278Not Available881Open in IMG/M
3300026023|Ga0207677_11911424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300026095|Ga0207676_12300198Not Available537Open in IMG/M
3300026095|Ga0207676_12502576All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300027787|Ga0209074_10470844Not Available540Open in IMG/M
3300027826|Ga0209060_10502353Not Available550Open in IMG/M
3300027839|Ga0209403_10194389Not Available1206Open in IMG/M
3300028380|Ga0268265_10493137Not Available1153Open in IMG/M
3300028381|Ga0268264_11843178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia615Open in IMG/M
3300028679|Ga0302169_10149922Not Available586Open in IMG/M
3300028784|Ga0307282_10274296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium812Open in IMG/M
3300028877|Ga0302235_10107266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1267Open in IMG/M
3300028906|Ga0308309_10106489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria2180Open in IMG/M
3300029922|Ga0311363_10988240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria740Open in IMG/M
3300029943|Ga0311340_10547140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1024Open in IMG/M
3300029943|Ga0311340_10591303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria972Open in IMG/M
3300029945|Ga0311330_10855571All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300029994|Ga0302283_1329278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria522Open in IMG/M
3300029999|Ga0311339_10155800All Organisms → cellular organisms → Bacteria2672Open in IMG/M
3300029999|Ga0311339_10774063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria928Open in IMG/M
3300030507|Ga0302192_10401257All Organisms → cellular organisms → Bacteria → Proteobacteria561Open in IMG/M
3300030520|Ga0311372_10548338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1675Open in IMG/M
3300030520|Ga0311372_10831331All Organisms → cellular organisms → Bacteria → Proteobacteria1256Open in IMG/M
3300030524|Ga0311357_10529925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria1093Open in IMG/M
3300030618|Ga0311354_10839524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria863Open in IMG/M
3300030618|Ga0311354_11567739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria580Open in IMG/M
3300030620|Ga0302046_11559707Not Available509Open in IMG/M
3300030739|Ga0302311_10540554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria794Open in IMG/M
3300030906|Ga0302314_10210187All Organisms → cellular organisms → Bacteria2373Open in IMG/M
3300031170|Ga0307498_10477545Not Available506Open in IMG/M
3300031232|Ga0302323_100305112Not Available1652Open in IMG/M
3300031234|Ga0302325_12140484All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria683Open in IMG/M
3300031236|Ga0302324_100243791All Organisms → cellular organisms → Bacteria2813Open in IMG/M
3300031236|Ga0302324_101089421All Organisms → cellular organisms → Bacteria → Proteobacteria1076Open in IMG/M
3300031251|Ga0265327_10394051Not Available602Open in IMG/M
3300031525|Ga0302326_13638406Not Available509Open in IMG/M
3300031546|Ga0318538_10488427Not Available667Open in IMG/M
3300031573|Ga0310915_10733623Not Available697Open in IMG/M
3300031671|Ga0307372_10046126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4303Open in IMG/M
3300031708|Ga0310686_101505967Not Available667Open in IMG/M
3300031708|Ga0310686_102771004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria659Open in IMG/M
3300031708|Ga0310686_107422976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria938Open in IMG/M
3300031730|Ga0307516_10632644All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum725Open in IMG/M
3300031747|Ga0318502_10945307Not Available525Open in IMG/M
3300031753|Ga0307477_10950155All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300031765|Ga0318554_10305854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria904Open in IMG/M
(restricted) 3300031825|Ga0255338_1120118Not Available847Open in IMG/M
3300031910|Ga0306923_12339822Not Available532Open in IMG/M
3300032002|Ga0307416_101447862Not Available793Open in IMG/M
3300032075|Ga0310890_11724374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium520Open in IMG/M
3300032261|Ga0306920_101983161Not Available816Open in IMG/M
3300032261|Ga0306920_102204733Not Available766Open in IMG/M
3300032892|Ga0335081_10456792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1623Open in IMG/M
3300032893|Ga0335069_12764194Not Available503Open in IMG/M
3300033134|Ga0335073_10094428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3878Open in IMG/M
3300033550|Ga0247829_11544562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria548Open in IMG/M
3300033829|Ga0334854_119088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria636Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.36%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.09%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.51%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.34%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.34%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.34%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.34%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.34%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.92%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.92%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.75%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.17%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.17%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.17%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.17%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.17%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.17%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.17%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.17%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.17%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.17%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.17%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.17%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.17%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.17%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.58%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.58%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.58%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.58%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.58%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.58%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.58%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.58%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.58%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.58%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.58%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.58%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.58%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.58%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.58%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.58%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.58%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.58%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.58%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.58%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.58%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.58%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2032320002Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+EnvironmentalOpen in IMG/M
2170459015Litter degradation PV4EngineeredOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001408Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300004030Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005217Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006186Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015203Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016747Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300020229Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-12mEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028679Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028877Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029994Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030507Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031251Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaGHost-AssociatedOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031671Soil microbial communities from Risofladan, Vaasa, Finland - OX-1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031727Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5Host-AssociatedOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031825 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
FACENCEE_64799002032320002SoilSATRATLDRLGAEAERTGEGPVLHGDPNQGEAHVVHGAHVESARLNLEWARALGVG
4PV_016427302170459015Switchgrass, Maize And Mischanthus LitterMMIGNPGQVAIAHEIFSPTADEISYWQDLDRLATEAEQNGSGPIIYGRPEQTGEGAHGCTIAHVGSARMNLDWADRLGLVNG
ICChiseqgaiiDRAFT_240612633300000033SoilDAERDDSGPITHGDASQGEAHVVHIAHVGSARLNLEWARDLGVID*
INPhiseqgaiiFebDRAFT_10496564723300000364SoilADAERTDSGPITHGDASQGEAHVVHIAHVGSARLNLEWARDLGVLD*
JGI20206J14855_105521523300001408Arctic Peat SoilIPLVHEVFSPTDDELAYWLELDHLATEAEGRDTGRIEHGDPNQGEGFVVHIAHVGSARKNLAWARDLGHID*
C688J35102_11796584123300002568SoilPTAEEIAFWQDLDRLASAAEGVDSAPILYGDASQGEGHEVHLAHVGSARKNLTWARDLGVL*
Ga0055471_1023704913300003987Natural And Restored WetlandsWQDLDRLAADAERDGSGPIVYGDPNQGEGHVVHIAHVGSARRNLAWARDLGVIE*
Ga0055444_1014154413300004030Natural And Restored WetlandsAAEISYWSDLDRLATVAAADPDAGPITYGDPNDGEGHIVHGAHVASARKNLAWARDLGLVETSASDGPPGPR*
Ga0062593_10044576923300004114SoilHIPLVHEVFTPTPEEVAYWRELDELALEAELAGTGPITHGDPSQGEAHVVHIAHVGSARKNLEWARALGVI*
Ga0066823_1013061313300005163SoilAEHVPLVHEVFTPTAEEIAYWRELDELAAEAERVNSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVI*
Ga0069005_1001923923300005217Natural And Restored WetlandsDRLATEAAANPDAGPITYGDPNDGEGHIVHGAHVASARKNLVWARELGLLD*
Ga0066388_10016140553300005332Tropical Forest SoilLVQEVFTPTADEIDYWTELDRLAADAEGADSAPITHGDASQGEAHVVHIAHVGSARLNLEWARDLGVLG*
Ga0066388_10400235613300005332Tropical Forest SoilVNELFTPTAAELRYWRELVRLADEAKRRGGGPVRYGDPDRGEGHVVHLAHVGSARQNLEWAAALGLGSGEDLP*
Ga0066388_10725092413300005332Tropical Forest SoilADEIAYWRELDQLASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVL*
Ga0070689_10211345323300005340Switchgrass RhizosphereYWSELDSLAAAAERDADAGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDSGGLR*
Ga0070669_10079577733300005353Switchgrass RhizosphereDAERDDSGPITHGDASQGEAHVVHLAHVGSARLNLEWARDLGVID*
Ga0070675_10205477823300005354Miscanthus RhizosphereLVHEIFSPAAEEIAYWSELDRLGAEAERTGEGPVLHGDPNQGEAHVVHGAHVESARLNLQWARDLGLC*
Ga0070673_10192434613300005364Switchgrass RhizosphereSPTAEEIKYWSELDTLAAAAERKADSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR*
Ga0070659_10058473713300005366Corn RhizosphereHEVFTPSADEIAYWRELDELASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVI*
Ga0070667_10033681423300005367Switchgrass RhizosphereIKYWSELDSLAAAAERDADAGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGMVDDSGGLR*
Ga0070665_10058036013300005548Switchgrass RhizosphereADEIAYWRELDELAAEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVI*
Ga0066692_1070722623300005555SoilDLGYYGMMLGHAGHVALVHEIFTPSRDDIEYWRALDRLASDAERTGTGPITYGDPGQGEGHVVHIAHVGSARQNLQWARDLGLDVD*
Ga0068855_10097718523300005563Corn RhizospherePTKEELAYWQRLDRLQTEAEKTGADRIIDGDANQGEAHVVHGAHVGSARKNLVWARELGVI*
Ga0068864_10069980113300005618Switchgrass RhizosphereEHVEIVNEIFSPSAEEIKYWSELDSLAAAAERDADAGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGMVDDSGGLR*
Ga0066903_10699330613300005764Tropical Forest SoilMIGNPRLVPIVHEYFTPTPNEIAYWKDLDRLAAEAEAAGTGPIIYGDPNRGEGHRVHIAHVGSARKNLIWARELGVA*
Ga0066789_1005975813300005994SoilELAYWLELDHLATEAEERDTGRIEHGDPNQGEGFVVHIAHVGSARKNLAWARDLGRID*
Ga0066789_1021594613300005994SoilIFTPTNDELRYWQDLDRLATEAEASGTGPILYGDANQGEGHVVHIAHVGSARKNLTWARGLGLIP*
Ga0075368_1037723123300006042Populus EndosphereSELDRLATEAERAGTGPVLYGDPNQGEGHVVHIAHIGSARANLEWARALGVVER*
Ga0075024_10047821413300006047WatershedsWRELVDLASEAERVGSGPIRHGDPRQGEAHVVHLAHVGSARKNLAWARDLGVID*
Ga0075363_10090615913300006048Populus EndospherePGEIAYWRELDRLATEAERTGSGPVIHGDPNQGEGHVVHIAHIGSARTNLAWARALGVLDG*
Ga0075364_1052357813300006051Populus EndosphereLATEAEQNGSGPIIYGDPNKGEGHTVHIAHVGSARMNLDWADRLGLVNG*
Ga0075015_10005077413300006102WatershedsVFTPSAEEIAYWRELDDLASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVID*
Ga0070716_10111178423300006173Corn, Switchgrass And Miscanthus RhizosphereADEIAYWRELDELASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVL*
Ga0070765_10166185423300006176SoilDRLATEAEGRGSGPVVYGDPNQGEGHVVHLAHVGSARKNLAWAEDLGLLG*
Ga0075367_1091450713300006178Populus EndosphereVYVPTVHELFTPSAEELAYWQHLDRLATDAEAAGADRILDGDPDRGEAHVVHIAHIGSARLNLEWAKALGVI*
Ga0075369_1040405023300006186Populus EndosphereYWQDLDRLATEAEQNGSGPIIYGDENKGEGHTVHIAHVGSARMNLDWADRLGLVNG*
Ga0079222_1020038423300006755Agricultural SoilTPTADEISYWQDLDRLAREAEGHGGPITYGDPNQGEGHVVHIAHVGSARLNLEWARDLGLLA*
Ga0079221_1127414813300006804Agricultural SoilHEVFTPTADEISYWQDLDRLAREAEGHGGPITYGDPNQGEGHVVHIAHVGSARLNLEWARDLGLLA*
Ga0079221_1129131613300006804Agricultural SoilPLVHEIFSPTAEELEYWQRLDRLATQAERAGSGPIVDGDPNQGEGHVVHIAHVGSARLNLEWARALGLL*
Ga0079217_1170360123300006876Agricultural SoilATEAERKADSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDGALR*
Ga0079216_1150826113300006918Agricultural SoilKADSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDQGRPT*
Ga0105240_1173716913300009093Corn RhizosphereTKEELAYWQRLDRLQTEAEKTGADRIIDGDANQGEAHVVHGAHVGSARKNLVWARELGVI
Ga0111539_1063177033300009094Populus RhizosphereLHVPLVHEVFTPTDHEIAYWSELDRLAADAERDDSGPITHGDASQGEAHVVHIAHVGSARLNLEWARDLGVID*
Ga0066709_10316087323300009137Grasslands SoilIPVVHGVFTPSTADVAYWQDLDRLATEAERDGSGPIVYGDPNRGEGHVVHIAHVGSARKNLQWARDLGLLE*
Ga0105243_1266854013300009148Miscanthus RhizosphereTAQEIAYWQDLDRLAAAAEGVSTEPILYGDASQGEGHEVHLAHVGSARKNLTWARDLGVL
Ga0105094_1078297523300009153Freshwater SedimentELDTLAAAAERKADSGPILHGEASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR*
Ga0116214_120374123300009520Peatlands SoilDRLAREAEAGDGERVTYGDARQGEGHVVHIAHVGSARRNLAWARELGVAP*
Ga0105238_1021439833300009551Corn RhizosphereWQRLDRLQTEAEKTGADRIIDGDANQGEAHVVHGAHVGSARKNLVWARELGVI*
Ga0105249_1156249513300009553Switchgrass RhizosphereVLVEDDGARRAQRVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARGLGVVD*
Ga0116216_1007447313300009698Peatlands SoilRLAREAEEGGGERVTYGDARQGEGHVVHIAHVGSARRNLAWARELGVAP*
Ga0116217_1056034623300009700Peatlands SoilSDEVAYWQDLDRLAREAEAGDGARVTYGDASQGEGHVVHIAHVGSARRNLAWARELGVAP
Ga0116130_127865513300009762PeatlandRLATEAEERGSGPVVYGDPNQGEGHVVHLAHVGSARKNLAWAEDLGLLG*
Ga0116219_1002065053300009824Peatlands SoilIAYWQELDRLATEAERTGQRAVHGDANQGEGHIVHIAHVGSARLNLEWARGLGLIR*
Ga0116219_1055642113300009824Peatlands SoilTEAEARASGPILYGDANQGEGHVIHIAHVGSARKNLAWARDLGLLD*
Ga0126313_1034538013300009840Serpentine SoilEIAYWRELDELAAEAERVNRGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGLI*
Ga0126312_1066023113300010041Serpentine SoilVFTPSAADVAYWQDLDRLARDAERDGTGPIVYGDANRGEGHVVHIAHVGSARQNLQWARDLGLLE*
Ga0126310_1066641523300010044Serpentine SoilPTAEDIAYWRELDELASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVI*
Ga0126306_1029476123300010166Serpentine SoilEHVPLVHEVFTPSAEEIAYWRELDELAAEAERVNRGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVI*
Ga0126378_1044412443300010361Tropical Forest SoilSENEIAYWKDLDRLAAEAERAGTGPIIYGDPNRGEGHRVHIAHVGSARKNLVWARDLGVA
Ga0126377_1279592123300010362Tropical Forest SoilDEIAYWTELDRLAADAERVDSGPITHGDASQGEAHVVHIAHVGSARLNLEWARDLGVLD*
Ga0126383_1344881813300010398Tropical Forest SoilMGYYGMMLGERRHIPLVHGVFSPTAEEIAYWQRLDRLATEAERAGSGPIVDGDPNQGEGHVVHIAHVGSARLNLEWARDLGVLD*
Ga0118733_10921253823300010430Marine SedimentAYWKELVALADAAEARGSEDAILHGDPNQGEAHVVHIAHVGSARLNLEWAQDLGLA*
Ga0126344_122832813300010866Boreal Forest SoilPVVNEIFTPSAAEVSYWQDLDRLAAEADATGSGPVVYGDPNQGEGHVVHIAHVGSARKNLEWARGLGLVPPV*
Ga0157303_1018206223300012896SoilLAAAAERKADSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR*
Ga0157286_1047988513300012908SoilYWQDLDRLAAAAEGVSTEPILYGDASQGEGHEVHLAHVGSARKNLTWARDLGVL*
Ga0137413_1124221023300012924Vadose Zone SoilFSPTEEELGYWQRLDRLQIEAERTGADRIIDGDVSQGEAHVVHGAHVGSARKNLKWAKELGVI*
Ga0164301_1083010323300012960SoilASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVL*
Ga0164302_1144121513300012961SoilELDQLATDAERSDSGPITHGDASQGEAHVVHLAHVGSARLNLEWARDLGVFD*
Ga0157375_1317385723300013308Miscanthus RhizosphereELDELAAEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVI*
Ga0181538_1011000913300014162BogAIFSPSAEEIAYWQDLDRLATEAEERGSGPVVYGDPNQGEGHVVHLAHVGSARKNLAWAEDLGLLG*
Ga0163163_1165367123300014325Switchgrass RhizosphereFSPTAQEIAYWQDLDRLAAAAEGVSTEPILYGDASQGEGHEVHLAHVGSARKNLTWARDLGVL*
Ga0163163_1231803423300014325Switchgrass RhizosphereLAAEAERVNSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVL*
Ga0182024_1049061313300014501PermafrostNAIFSPSAEEIAYWQDLDRLATEAEERGSGPVVYGDPNQGEGHVVHLAHVGSARKNLAWAEDLGLLG*
Ga0182024_1248735423300014501PermafrostEELAYWQRLDRLQTEAEKTGADRIIDGDLNQGEAHVVHGAHVGSARKNLAWARELGVI*
Ga0173480_1084173623300015200SoilRELDRLAADAERDDSGPITHGDASQGEAHVVHLAHVGSARLNLEWARDLGVID*
Ga0167650_113600623300015203Glacier Forefield SoilYHAVFTPTDAEISYWRELDHLASEAERTGSGPIVHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVID*
Ga0137409_1134617813300015245Vadose Zone SoilRLDRLQIEAEKTGADRIIDGDVSQGEAHVVHGAHVGSARKNLKWAKELGVI*
Ga0132258_1003142213300015371Arabidopsis RhizosphereELDELASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARLNLEWARDLGVID*
Ga0182040_1089616623300016387SoilGEIAYWRDLHRLATDAEAHEAGPILYGDENQGEGHVVHIAHVGSARKNLAWARDLGLVD
Ga0182040_1171110013300016387SoilTEAEVTGEGPIVYGDPNQGEGHVVHIAHVGSARKNLEWAHALGVT
Ga0182039_1093725923300016422SoilDLDRLAREAEAVDGARVTYGDASQGEGHVVHIAHVGSARRNLAWARELGVAP
Ga0182039_1169210013300016422SoilLDRLATEAERAGSGPIIDGDPNQGEGHVVHIAHVGSARLNLEWARALGLV
Ga0182039_1192977523300016422SoilFTPTEAEIAYWQDLDRLASEAEANGRGPITYGDASAGEGHVVHIAHVGSARQNLRWARELGVAP
Ga0182078_1039348213300016747Salt MarshELDELSAAADKAEKDRLIHGTANQGEAHVVHQAHVGSARKNLAWARELGVI
Ga0187824_1016591913300017927Freshwater SedimentIVNEIFSPTKEDVAYWRDLDRLAAEAEARGTGPILYGDPNQGEGHVVHIAHVGSARKNLTWARELGITD
Ga0187819_1033441613300017943Freshwater SedimentNPRLVPIVHEYFTPSQSEIAYWKDLDRLAAEAEAAGTGPIIYGDPNRGEGHRVHIAHVGSARKNLEWARELGVA
Ga0187817_1042613613300017955Freshwater SedimentIVHEIFTPTKDEIAYWQDLDRLAAHAGDREGGPIVYGDPNQGEGHVIHIAHVGSARKNLAWARDLGLVDPDRPAPG
Ga0187779_1045940413300017959Tropical PeatlandDLDRLAAEAERTGTGPILYGDERQGEGHVVHIAHVGSARLNLEWARALGLVP
Ga0190266_1079222413300017965SoilSPTAEEIAYWQDLDRLAAAAEGVSTEPILYGDASQGEGHEVHLAHVGSARKNLTWARDLGVL
Ga0187880_115269513300018016PeatlandYWQDLDRLATEAEERGSGPVVYGDPNQGEGHVVHLAHVGSARKNLAWAEDLGLLG
Ga0187885_1008506413300018025PeatlandLATEAEERGSGPVVYGDPNQGEGHVVHLAHVGSARKNLAWAEDLGLLG
Ga0187857_1017331413300018026PeatlandLVNAIFSPSAEEIAYWQDLDRLATEAEERGSGPVVYGDPNQGEGHVVHLAHVGSARKNLAWAEDLGLLG
Ga0187887_1092417013300018043PeatlandAEEISYWQELERLALEAERTGNRAVHGDASQGEGHIVHIAHVGSARLNLEWARGLGLVP
Ga0190274_1242420213300018476SoilEIAYWQDLDRLAAAAEGVSTEPILYGDASQGEGHEVHLAHVGSARKNLAWARDLGVL
Ga0190274_1288498423300018476SoilFSPTAEEIKYWSELDTLAAEAERKADSGPILHGEASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR
Ga0190271_1191960213300018481SoilPTAEEIKYWSELDTLAAEAERKADSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR
Ga0066669_1137152523300018482Grasslands SoilMLGHAGHVALVHEIFTPSRDDIEYWRALDRLASDAERTGTGPITYGDPAQGEGHVVHIAHVGSARQNLQWARGLGLDVD
Ga0190273_1154809413300018920SoilTADEISYWQDLDRLATEAEVKDSGPIVYGDPNKGEGHTVHIAHVGSARMNLDWARHLGLVDG
Ga0194042_104179123300020229Anoxic Zone FreshwaterNWQDLDRLATEAEEKGSGPIVYGDPNKGEGHTVHIAHVGSARMNLDWARQLGLVNKG
Ga0210401_1054027613300020583SoilHEHFTPSAKEIAYWKDLDRLAAEAERAGAGPIIYGDPNRGEGHRVHIAHVGSARKNLVWARELGIV
Ga0210393_1025444923300021401SoilSPTDDELAYWLELDHLATEAEERDTGRIEHGDPNQGEGFVVHIAHVGSARKNLAWARDLGRID
Ga0210386_1117878523300021406SoilYWKDLDRLAAEAERAGAGPIIYGDPNRGEGHRVHIAHVASARKNLVWARELGIV
Ga0207692_1070181323300025898Corn, Switchgrass And Miscanthus RhizosphereLASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVL
Ga0207695_1073549613300025913Corn RhizosphereQTEAEKTGADRIIDGDANQGEAHIVHGAHVESARKNLRWARELGVI
Ga0207695_1091613623300025913Corn RhizosphereSPTKEELAYWQRLDRLQTEAEKTGADRIIDGDANQGEAHVVHGAHVGSARKNLVWARELGVI
Ga0207662_1117297223300025918Switchgrass RhizosphereYWTELDQLATDAERSDSGPITHGDASQGEAHVVHLAHVGSARLNLEWARDLGVID
Ga0207657_1095750633300025919Corn RhizosphereEIFSPTAEEIKYWSELDQLATEAEKKADSGPILHGEASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAAGLR
Ga0207644_1167165433300025931Switchgrass RhizosphereVPTVHELFSPSADEIAYWQRLDRLATEAARTGTRVLDGDPNMGEGHVVHPAHVGSARLNLEWARGLGLVP
Ga0207661_1023943713300025944Corn RhizosphereAAEADRVNHGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVL
Ga0207661_1128353913300025944Corn RhizosphereMISNPEHVPLVHEVCSPTADELAYWSDLDRLATEAERAGGGKITYGDANQGEGHVVHIAHVGSARQNLEWARGLGVI
Ga0207667_1100565013300025949Corn RhizosphereVVHEVFSPTKEELAYWQRLDRLQTEAEKTGADRIIDGDANQGEAHVVHGAHVGSARKNLVWARELGVI
Ga0207651_1184935723300025960Switchgrass RhizosphereGMMIGAVEHVEIVNEIFSPSAEEIKYWSELDSLAAAAERDADAGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDSGGLR
Ga0207668_1071527813300025972Switchgrass RhizosphereMIGAAEHVELVNEVFSPTAEEIKYWTELDTLAAAAERKSDSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR
Ga0207677_1191142423300026023Miscanthus RhizosphereADEIAYWRELDELASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVL
Ga0207676_1230019813300026095Switchgrass RhizosphereGMMIGAAEHVEIVNEIFSPTAEEIKYWSELDTLAAEAERKADSGPILHGEASQGEAHVVHIAHIGSARLNLEWARGLGMVDDSGGLR
Ga0207676_1250257623300026095Switchgrass RhizosphereDRLAADAERDDSGPITHGDASQGEAHVVHLAHVGSARLNLEWARDLGVID
Ga0209074_1047084423300027787Agricultural SoilTPTADEISYWQDLDRLAREAEGHGGPITYGDPNQGEGHVVHIAHVGSARLNLEWARDLGLLA
Ga0209060_1050235313300027826Surface SoilTAEEISYWQDLDRLAAEAEARGSGPILYGDPNQGEGHVVHIAHVGSARLNLRWARDLGLV
Ga0209403_1019438923300027839MarineIAYWQDLDRLATEAEETGTGPITYGDPNQGEGHVVHIAHVGSARMNLEWSRRLGLVSG
Ga0268265_1049313723300028380Switchgrass RhizosphereKADSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR
Ga0268264_1184317823300028381Switchgrass RhizosphereELVHLGDEAERTGIGPVLVGDPNQGEAHVVHGAHVESARLNLEWARALGL
Ga0302169_1014992223300028679FenEITYWQELDALAVEAERTGHGPITHGDPAQGEAHVVHIAHIGSARQNLAWARDLGVLEPM
Ga0307282_1027429623300028784SoilLDELASEAERVGSGPIRHGDPRQGEAHVVHIAHVGSARKNLAWARDLGVID
Ga0302235_1010726623300028877PalsaDLGYFGMMLGDPAHVALVNAIFSPTASEITYWQDLDRLATEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0308309_1010648913300028906SoilAYWLELDHLATEAEERDTGRIEHGDPNQGEGFVVHIAHVGSARKNLAWARDLGRID
Ga0311363_1098824023300029922FenAMVNAIFSPSAEEIAYWQDLDRLATEAEERGRGPVVYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0311340_1054714023300029943PalsaAIFSPTAEEIAYWQDLDRLTTEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0311340_1059130313300029943PalsaPTGEEISYWQDLDRLANEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWAKDLGLLG
Ga0311330_1085557113300029945BogFSPGVTDLAYWQDLDRLATEAEERGLGPILYGDANAGEGHVVHIAHVGSARQNLEWSRDLGLLPPE
Ga0302283_132927823300029994FenTEAEERGRGPVVYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0311339_1015580013300029999PalsaDRLTTEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0311339_1077406323300029999PalsaAEDIAYWQDLDRLTTEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWANDLGLLG
Ga0302192_1040125713300030507BogDKTGADRIIDGEPGQGEAHVVHGAHIGSARKNLAWARELGVL
Ga0311372_1054833813300030520PalsaYFGMMLGDPAHVSLVNAIFSPTASEITYWQDLDRLATEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0311372_1083133123300030520PalsaPIVHECFSPTQEELAYWQRLDRLQTEAEKTGADRIIDGDPNQGEAHVVHGAHVGSARKNLAWARELGVI
Ga0311357_1052992513300030524PalsaDRLTTEAEERGSGPVRYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0311354_1083952413300030618PalsaYFGMMLGDPAHVALVNAIFSPTASEITYWQDLDRLATEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0311354_1156773913300030618PalsaDIAYWQDLDRLTTEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWANDLGLLG
Ga0302046_1155970713300030620SoilGMMIGAAEHVEIVNDVFSPTAEEIKYWTELDTLATEAESKADSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR
Ga0302311_1054055423300030739PalsaHVALVNAIFSPTASEITYWQDLDRLATEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0302314_1021018713300030906PalsaSEITYWQDLDRLATEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0307498_1047754513300031170SoilAADAERTESGPITQGDASQGEAHVVHIAHVGSARKNLAWARDLGVI
Ga0302323_10030511213300031232FenTPTAAEIAYWSDLDRLATAAAADPDAGPITYGDPNDGEGHIVHGAHVASARKNLAWARDLGLVD
Ga0302325_1214048423300031234PalsaHECFSPTADELAYWRRLDHLAIEADKTGADRIMDGEPGQGEAHVVHGAHIGSARKNLAWARELGMI
Ga0302324_10024379113300031236PalsaLGDPAHVAMVNAIFSPTAEEIAYWQDLDRLTTEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWARDLGLLG
Ga0302324_10108942123300031236PalsaWQRLDRLQTEAEKTGADRIIDGDLNQGEAHVVHGAHVGSARKNLVWARELGVI
Ga0265327_1039405123300031251RhizosphereGYWQDLDCLAADAERTGSGPITYGDASQGEGHIVHIAHVGSARKNLTWARDLGLLD
Ga0302326_1363840623300031525PalsaISYWLDLDKLATEAEAGATEAGPILYGDKNQGEGHVVHIAHVGSARKNLTWARGLGLIS
Ga0318538_1048842713300031546SoilLDRLATDAEANEAGPILYGDANQGEGHVVHIAHVGSARKNLAWARDLGLVD
Ga0310915_1073362313300031573SoilTDAEAHEAGPILYGDENQGEGHVVHIAHVGSARKNLAWARDLGLVD
Ga0307372_1004612613300031671SoilTEAEGRDTGRIEHGDPNQGEGFVVHIAHVGSARKNLAWARDLGRID
Ga0310686_10150596713300031708SoilGNPRLVPIVHEHFTPSAAEIAYWKDLDRLAAEAEKNGSGPIIYGDPNRGEGHRVHIAHVGSARKNLVWARELSVA
Ga0310686_10277100423300031708SoilYFGMMLGDPAHVALVNTIFSPTAEEIAYWQDLDRLTTEAEERGSGPVLYGDPNQGEGHVVHLAHVGSARKNLAWAKDLGLLA
Ga0310686_10742297613300031708SoilAEGHADRILHGDPNKGEGYVVHIAHVESARKNLAWASDLGIRE
Ga0316576_1008353713300031727RhizosphereAHVSLAHEVFTPTPDEVAYWRTLVELGDEAERAAGPDDVPGPVLHGDPNQGEAHVVHGAHVASARLNLEWARALGVA
Ga0307516_1063264413300031730EctomycorrhizaSPTAEELAYWQRLDRLSTEAERTGSRVIDGDPNQGEAHVVHTAHVGSARKNLAWAKELGL
Ga0318502_1094530723300031747SoilFTPTQDEIEYWQDLDRLAAEAEQRDSGPILYGDANQGEGHVIHIAHVGSARKNLDWARDLGLVDTEMSPTS
Ga0318492_1070432113300031748SoilAEAERIGSGPIRHGDPRRGEAHVVHIAHVGSARKNLAWARDLDVL
Ga0307477_1095015523300031753Hardwood Forest SoilAEAEGRGGGPIVYGDANQGEGHVVHQAHVGSARRNLAWARDLGLVD
Ga0318554_1030585423300031765SoilRHIQLVHEVFSPTAEEIEYWARLDRLATEAERAGSGPIIDGDPNQGEGHVVHIAHVGSARLNLEWARALGLV
(restricted) Ga0255338_112011823300031825Sandy SoilYWQDLDRLATEAEANGTGPIVYGDPNQGEGHVVHIAHVGSARMNLEWARRLGLLEG
Ga0306923_1233982223300031910SoilWARLDRLATEAERAGSGPIIDGDPNQGEGHVVHIAHVGSARLNLEWARALGLVD
Ga0307416_10144786223300032002RhizosphereTLATEAERNADSGPILHGDASQGEAHVVHIAHVGSARLNLEWARGLGLVDDAGGLR
Ga0310890_1172437413300032075SoilYWSELDRLAADAERDDSGPITHGDASQGEAHVVHIAHVGSARLNLEWARDLGVID
Ga0306920_10198316113300032261SoilTPDEIAYWQDLDRLARDAEARGGERVTYGDARQGEGHVVHIAHVGSARRNLAWARELGVA
Ga0306920_10220473323300032261SoilATKAEVTGEGPIVYGDPNQGEGHVVHIAHVGSARKNLEWAHALGVT
Ga0335081_1045679233300032892SoilEIEYWQDLDRLAAEAEQRDSGPILYGDPNQGEGHVIHIAHVGSARKNLAWARDLGLVEPQMSPTS
Ga0335069_1276419423300032893SoilRLAAEAERTGTGPILYGDERQGEGHVVHIAHVGSARLNLEWARALGLVP
Ga0335073_1009442813300033134SoilLDRLAAEAEERQGDPILYGDPNQGEGHVVHIAHVGSARKNLAWARDLGLLGPEG
Ga0247829_1154456223300033550SoilHIPLVHEVFTPTPEEVAYWRELDELALEAELAGTGPITHGDPSQGEAHVVHIAHVGSARKNLEWARALGVI
Ga0334854_119088_427_6363300033829SoilLVNAIFSPSAEEIAYWRDLDRLATEAEERGHGPVVYGDPNQGEGHVVHLAHVGSARKNLAWAEDLGLLG


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