NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F035451

Metagenome / Metatranscriptome Family F035451

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F035451
Family Type Metagenome / Metatranscriptome
Number of Sequences 172
Average Sequence Length 68 residues
Representative Sequence MTMSKMALLGVAVVAAAVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Number of Associated Samples 147
Number of Associated Scaffolds 172

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 69.59 %
% of genes near scaffold ends (potentially truncated) 31.40 %
% of genes from short scaffolds (< 2000 bps) 77.33 %
Associated GOLD sequencing projects 132
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.279 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(8.721 % of family members)
Environment Ontology (ENVO) Unclassified
(33.140 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.744 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 46.94%    β-sheet: 9.18%    Coil/Unstructured: 43.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 172 Family Scaffolds
PF09361Phasin_2 17.44
PF13581HATPase_c_2 8.14
PF13103TonB_2 4.65
PF02518HATPase_c 2.33
PF09955DUF2189 2.33
PF04392ABC_sub_bind 1.74
PF07568HisKA_2 1.16
PF00590TP_methylase 1.16
PF12275DUF3616 0.58
PF03006HlyIII 0.58
PF00166Cpn10 0.58
PF01970TctA 0.58
PF07536HWE_HK 0.58
PF00589Phage_integrase 0.58
PF12146Hydrolase_4 0.58
PF01165Ribosomal_S21 0.58
PF00027cNMP_binding 0.58
PF14824Sirohm_synth_M 0.58
PF13426PAS_9 0.58
PF12071DUF3551 0.58
PF13241NAD_binding_7 0.58
PF07869DUF1656 0.58
PF00989PAS 0.58
PF00072Response_reg 0.58

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 172 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 1.74
COG3920Two-component sensor histidine kinase, HisKA and HATPase domainsSignal transduction mechanisms [T] 1.74
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.58
COG0828Ribosomal protein S21Translation, ribosomal structure and biogenesis [J] 0.58
COG1272Predicted membrane channel-forming protein YqfA, hemolysin III familyIntracellular trafficking, secretion, and vesicular transport [U] 0.58
COG1784TctA family transporterGeneral function prediction only [R] 0.58
COG3333TctA family transporterGeneral function prediction only [R] 0.58
COG4251Bacteriophytochrome (light-regulated signal transduction histidine kinase)Signal transduction mechanisms [T] 0.58


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.28 %
All OrganismsrootAll Organisms33.72 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0564657Not Available739Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0524059Not Available629Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0615131All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300000787|JGI11643J11755_11407821All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300000789|JGI1027J11758_12771195Not Available664Open in IMG/M
3300000953|JGI11615J12901_10140200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1439Open in IMG/M
3300001978|JGI24747J21853_1007015Not Available1077Open in IMG/M
3300002155|JGI24033J26618_1011592Not Available1053Open in IMG/M
3300003994|Ga0055435_10033882Not Available1165Open in IMG/M
3300004024|Ga0055436_10249659Not Available566Open in IMG/M
3300004062|Ga0055500_10116812Not Available606Open in IMG/M
3300004114|Ga0062593_100176999All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1663Open in IMG/M
3300004114|Ga0062593_101511268Not Available724Open in IMG/M
3300004114|Ga0062593_101826054Not Available669Open in IMG/M
3300004157|Ga0062590_101564077Not Available665Open in IMG/M
3300004157|Ga0062590_101751679Not Available635Open in IMG/M
3300004463|Ga0063356_100182994All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2444Open in IMG/M
3300004463|Ga0063356_102378136Not Available810Open in IMG/M
3300004463|Ga0063356_103882295Not Available644Open in IMG/M
3300004463|Ga0063356_105624136Not Available538Open in IMG/M
3300005093|Ga0062594_100421329Not Available1090Open in IMG/M
3300005159|Ga0066808_1012531Not Available776Open in IMG/M
3300005162|Ga0066814_10010910Not Available1116Open in IMG/M
3300005218|Ga0068996_10006668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1457Open in IMG/M
3300005276|Ga0065717_1001967Not Available4691Open in IMG/M
3300005288|Ga0065714_10100536Not Available1662Open in IMG/M
3300005290|Ga0065712_10126736All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-471598Open in IMG/M
3300005293|Ga0065715_10015316Not Available3135Open in IMG/M
3300005295|Ga0065707_10275020Not Available1062Open in IMG/M
3300005328|Ga0070676_10072963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-472064Open in IMG/M
3300005328|Ga0070676_10123948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1625Open in IMG/M
3300005329|Ga0070683_101886555Not Available574Open in IMG/M
3300005333|Ga0070677_10000234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria19211Open in IMG/M
3300005334|Ga0068869_100946051Not Available748Open in IMG/M
3300005340|Ga0070689_100037877All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium3688Open in IMG/M
3300005353|Ga0070669_100060406All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2784Open in IMG/M
3300005354|Ga0070675_102216386Not Available506Open in IMG/M
3300005356|Ga0070674_100048061All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2927Open in IMG/M
3300005356|Ga0070674_101337783Not Available640Open in IMG/M
3300005364|Ga0070673_100792149Not Available875Open in IMG/M
3300005366|Ga0070659_100069734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium2791Open in IMG/M
3300005434|Ga0070709_10368444Not Available1065Open in IMG/M
3300005434|Ga0070709_10774279Not Available751Open in IMG/M
3300005438|Ga0070701_10015228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3545Open in IMG/M
3300005455|Ga0070663_101348377Not Available630Open in IMG/M
3300005457|Ga0070662_100664947All Organisms → cellular organisms → Bacteria → Proteobacteria879Open in IMG/M
3300005518|Ga0070699_101279673Not Available673Open in IMG/M
3300005536|Ga0070697_101184013Not Available681Open in IMG/M
3300005548|Ga0070665_100922889Not Available886Open in IMG/M
3300006041|Ga0075023_100502773All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300006057|Ga0075026_100109850Not Available1378Open in IMG/M
3300006172|Ga0075018_10533426Not Available616Open in IMG/M
3300006186|Ga0075369_10412549Not Available637Open in IMG/M
3300006196|Ga0075422_10007241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium3527Open in IMG/M
3300006755|Ga0079222_10771962Not Available778Open in IMG/M
3300006852|Ga0075433_10554928Not Available1010Open in IMG/M
3300006854|Ga0075425_100117100Not Available3039Open in IMG/M
3300006854|Ga0075425_102087210Not Available633Open in IMG/M
3300006903|Ga0075426_10226586Not Available1358Open in IMG/M
3300006903|Ga0075426_11082314Not Available607Open in IMG/M
3300006904|Ga0075424_100327381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense1632Open in IMG/M
3300007076|Ga0075435_100229029Not Available1579Open in IMG/M
3300009011|Ga0105251_10103018Not Available1304Open in IMG/M
3300009036|Ga0105244_10027401Not Available3071Open in IMG/M
3300009094|Ga0111539_10005336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales16626Open in IMG/M
3300009101|Ga0105247_10634798Not Available796Open in IMG/M
3300009147|Ga0114129_13168696Not Available536Open in IMG/M
3300009148|Ga0105243_11598505Not Available678Open in IMG/M
3300009162|Ga0075423_10043316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4612Open in IMG/M
3300009162|Ga0075423_10110414All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae2880Open in IMG/M
3300009551|Ga0105238_12629527Not Available540Open in IMG/M
3300009553|Ga0105249_10245070All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1774Open in IMG/M
3300010371|Ga0134125_11391562Not Available765Open in IMG/M
3300010375|Ga0105239_10135176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2745Open in IMG/M
3300010375|Ga0105239_11177605Not Available883Open in IMG/M
3300010396|Ga0134126_10417206Not Available1557Open in IMG/M
3300010400|Ga0134122_12195847Not Available595Open in IMG/M
3300011119|Ga0105246_11109309Not Available723Open in IMG/M
3300012473|Ga0157340_1000913All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300012480|Ga0157346_1005127Not Available800Open in IMG/M
3300012494|Ga0157341_1016704Not Available686Open in IMG/M
3300012883|Ga0157281_1001260All Organisms → cellular organisms → Bacteria → Proteobacteria1965Open in IMG/M
3300012892|Ga0157294_10045300Not Available979Open in IMG/M
3300012893|Ga0157284_10342032Not Available504Open in IMG/M
3300012899|Ga0157299_10018117Not Available1300Open in IMG/M
3300012912|Ga0157306_10417873Not Available529Open in IMG/M
3300012939|Ga0162650_100081715Not Available559Open in IMG/M
3300012943|Ga0164241_10450766Not Available924Open in IMG/M
3300012957|Ga0164303_10017111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2705Open in IMG/M
3300012989|Ga0164305_10803623Not Available780Open in IMG/M
3300013297|Ga0157378_12158795Not Available608Open in IMG/M
3300013306|Ga0163162_12173734Not Available637Open in IMG/M
3300013308|Ga0157375_10178641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-472273Open in IMG/M
3300014320|Ga0075342_1008517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2175Open in IMG/M
3300014321|Ga0075353_1187637Not Available545Open in IMG/M
3300014745|Ga0157377_10547044Not Available817Open in IMG/M
3300015201|Ga0173478_10004799All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium3160Open in IMG/M
3300015371|Ga0132258_11175505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1939Open in IMG/M
3300015371|Ga0132258_12209759Not Available1381Open in IMG/M
3300015371|Ga0132258_13708650Not Available1042Open in IMG/M
3300015372|Ga0132256_100042003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4204Open in IMG/M
3300015372|Ga0132256_100339097Not Available1595Open in IMG/M
3300015372|Ga0132256_101325217Not Available832Open in IMG/M
3300015372|Ga0132256_102478882Not Available620Open in IMG/M
3300015373|Ga0132257_100339846Not Available1812Open in IMG/M
3300015373|Ga0132257_100676129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae1281Open in IMG/M
3300015374|Ga0132255_102680355Not Available762Open in IMG/M
3300018028|Ga0184608_10534373Not Available500Open in IMG/M
3300018067|Ga0184611_1030842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium1716Open in IMG/M
3300018072|Ga0184635_10009908All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3290Open in IMG/M
3300018078|Ga0184612_10209247All Organisms → cellular organisms → Bacteria → Proteobacteria1012Open in IMG/M
3300019356|Ga0173481_10011045All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-472553Open in IMG/M
3300019361|Ga0173482_10352664Not Available667Open in IMG/M
3300022756|Ga0222622_10172820Not Available1413Open in IMG/M
3300022880|Ga0247792_1012754Not Available1316Open in IMG/M
3300022880|Ga0247792_1017219Not Available1174Open in IMG/M
3300022883|Ga0247786_1157083Not Available514Open in IMG/M
3300022892|Ga0247753_1004993All Organisms → cellular organisms → Bacteria1301Open in IMG/M
3300022893|Ga0247787_1007209Not Available1318Open in IMG/M
3300022901|Ga0247788_1015674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1300Open in IMG/M
3300023066|Ga0247793_1046930Not Available684Open in IMG/M
3300023071|Ga0247752_1007300All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1483Open in IMG/M
3300023072|Ga0247799_1028997Not Available869Open in IMG/M
3300023102|Ga0247754_1106148Not Available681Open in IMG/M
3300025551|Ga0210131_1089252Not Available532Open in IMG/M
3300025900|Ga0207710_10022828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2686Open in IMG/M
3300025906|Ga0207699_10287837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1144Open in IMG/M
3300025906|Ga0207699_11467014Not Available505Open in IMG/M
3300025911|Ga0207654_10559313Not Available813Open in IMG/M
3300025913|Ga0207695_10117779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense2628Open in IMG/M
3300025916|Ga0207663_11305535Not Available584Open in IMG/M
3300025918|Ga0207662_10429114Not Available901Open in IMG/M
3300025922|Ga0207646_11179495Not Available672Open in IMG/M
3300025926|Ga0207659_11865018Not Available510Open in IMG/M
3300025932|Ga0207690_10054658All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-472685Open in IMG/M
3300025932|Ga0207690_10121595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1897Open in IMG/M
3300025937|Ga0207669_11916670Not Available506Open in IMG/M
3300025938|Ga0207704_10074962All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2161Open in IMG/M
3300025944|Ga0207661_11482300Not Available622Open in IMG/M
3300025953|Ga0210068_1010749Not Available1232Open in IMG/M
3300025959|Ga0210116_1092076Not Available596Open in IMG/M
3300025960|Ga0207651_10312464Not Available1311Open in IMG/M
3300026041|Ga0207639_10168408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1853Open in IMG/M
3300026742|Ga0207597_101658Not Available715Open in IMG/M
3300026752|Ga0207473_102702Not Available627Open in IMG/M
3300026944|Ga0207570_1002749Not Available1077Open in IMG/M
3300026960|Ga0207582_1003311Not Available1298Open in IMG/M
3300027364|Ga0209967_1054134Not Available618Open in IMG/M
3300027437|Ga0207476_102619Not Available795Open in IMG/M
3300027523|Ga0208890_1001537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2337Open in IMG/M
3300027873|Ga0209814_10000193All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales18171Open in IMG/M
3300027907|Ga0207428_10268650Not Available1268Open in IMG/M
3300028814|Ga0307302_10393330Not Available685Open in IMG/M
3300030916|Ga0075386_11858894Not Available784Open in IMG/M
(restricted) 3300031150|Ga0255311_1020104Not Available1373Open in IMG/M
(restricted) 3300031150|Ga0255311_1155080Not Available510Open in IMG/M
3300031170|Ga0307498_10060396Not Available1058Open in IMG/M
(restricted) 3300031197|Ga0255310_10007247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2862Open in IMG/M
3300031226|Ga0307497_10195158Not Available873Open in IMG/M
3300031231|Ga0170824_128672812All Organisms → cellular organisms → Bacteria → Proteobacteria2131Open in IMG/M
3300031716|Ga0310813_10051913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium3023Open in IMG/M
3300031740|Ga0307468_100055896Not Available2097Open in IMG/M
3300031847|Ga0310907_10178427Not Available998Open in IMG/M
3300031940|Ga0310901_10059782Not Available1275Open in IMG/M
3300032000|Ga0310903_10086279Not Available1304Open in IMG/M
3300032180|Ga0307471_100082774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2832Open in IMG/M
3300033433|Ga0326726_10204290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1824Open in IMG/M
3300033433|Ga0326726_10301930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 534211502Open in IMG/M
3300034817|Ga0373948_0000126All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8041Open in IMG/M
3300034819|Ga0373958_0000391All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5311Open in IMG/M
3300034820|Ga0373959_0000656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5946Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.72%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.65%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.07%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.49%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.33%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere2.33%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.91%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.74%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.74%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.74%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.16%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.16%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.16%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.16%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.16%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.16%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.16%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.58%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.58%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.58%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.58%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.58%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.58%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.58%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300001978Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6Host-AssociatedOpen in IMG/M
3300002155Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7Host-AssociatedOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004062Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005159Soil and rhizosphere microbial communities from Laval, Canada - mgLPBEnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005218Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300005276Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5Host-AssociatedOpen in IMG/M
3300005288Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006186Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012473Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610Host-AssociatedOpen in IMG/M
3300012480Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610Host-AssociatedOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300012883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1EnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012939Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014321Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022880Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300022892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5EnvironmentalOpen in IMG/M
3300022893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4EnvironmentalOpen in IMG/M
3300022901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4EnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300023102Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5EnvironmentalOpen in IMG/M
3300025551Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025953Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025959Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026742Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5w-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026752Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026944Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026960Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027364Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027437Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G05K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027523Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_056465722228664021SoilMALLGVAVLAAVVIGSGTLAWVQNGAPTADHENATNYVVGPDGRLIGAAPNASIRSQWERDGLPN
ICChiseqgaiiDRAFT_052405923300000033SoilMALLGVAVLAAVVIGSGTLAWVXNGAXTADHENATNYVVGPDGRLIGAAPNASIRSQWERDGLPN*
ICChiseqgaiiDRAFT_061513123300000033SoilMILSKMKLLGAAVVASAVIVSVALACFNNGAATADHGNATSYVVGPDGKLIGAAPNPSIRSQWXREGLPN*
JGI11643J11755_1140782123300000787SoilMILSKMKLLGAAVVASAVIVSVALACFNNGAATADHGNATSYVVGPDGKLIGAAPNPSIRSQWQREGLPN*
JGI1027J11758_1277119513300000789SoilMILSKMKLLGAAVVASAVIVSVALACFNNGAATADHGNATSYVVGPDGKLIGAAPNPSIRSQWEREGLPN*
JGI11615J12901_1014020033300000953SoilGAVVVAAAVIGSGTLAWIHNDAPTADHENTTNYVVGPDGGLIGAAPNASIRSQWERDGLPN*
JGI24747J21853_100701533300001978Corn, Switchgrass And Miscanthus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPN
JGI24033J26618_101159213300002155Corn, Switchgrass And Miscanthus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATXYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0055435_1003388223300003994Natural And Restored WetlandsMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENATHYVDGPDGRLIGAAPNQSIRSQWERDGLPN*
Ga0055436_1024965913300004024Natural And Restored WetlandsLGAVVVAAVVIGSGTLAWVRNGAATADHENATHYVDGPDGRLIGAAPNQSIRSQWERDGLPN*
Ga0055500_1011681223300004062Natural And Restored WetlandsMTISKITLLGAVVVVAAVIGSGTLAWIHNELATTDHENTTNYVVGPDGGVIGAAPSASIRSQWEQDGLPN*
Ga0062593_10017699923300004114SoilMTMSKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASTRSQWERDGLPN*
Ga0062593_10151126823300004114SoilMTMSKLTLLGTAVVAAVVIGSGTLAWVHNGAATADHENAGNYVIGPEGGLIGAAPNPSIRSQWERDGLPE*
Ga0062593_10182605413300004114SoilMTMSKMTLLTAVVVVAAVIGSGTLAWIHNEPATADHENATNYVVGPDGALIGAAPNASIRSQWERNGLPN*
Ga0062590_10156407723300004157SoilMALLGVAVVAVLVIGSGTLAWVHNEPATANHDNAPNYVVGPDGRLIGAAPNASIRSQWERDGLPN*
Ga0062590_10175167923300004157SoilMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0063356_10018299443300004463Arabidopsis Thaliana RhizosphereMTMSKMTLLGAVVVAAAVIGSGTLAWIHNDAPTADHENTTNYVVGPDGGLIGAAPNASIRSQWERDGLPN*
Ga0063356_10237813623300004463Arabidopsis Thaliana RhizosphereMTLLTAVVVVAAVIGSGTLAWIHNEPATADHENATNYVVGPDGALIGAAPNASIRSQWERNGLPN*
Ga0063356_10388229523300004463Arabidopsis Thaliana RhizosphereMTMSKMALLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0063356_10562413613300004463Arabidopsis Thaliana RhizosphereMTMSKMAFLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0062594_10042132933300005093SoilMTMSKMALLGVAVLAAVVIGSGTLAWVHNGAPTADHENATNYVVGPDGRLIGAAPNASIRSQWERDGLPN*
Ga0066808_101253113300005159SoilMTMSKMALLGVAVVAAVVIGSGTLAWVHNGAATANHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0066814_1001091023300005162SoilMALLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0066677_1068761523300005171SoilMSNASVIPSNEARKLILSKMKLLGATVGAAAVIGSGALAWVHNGAATADQGNGTNYVVGQDGKLIGAAPNPSIRSQWQREGFPN*
Ga0068996_1000666813300005218Natural And Restored WetlandsSKITLLGAVVVVAAVIGSGTLAWIHNELATTDHENTTNYVVGPDGGVIGAAPSASIRSQWEQDGLPN*
Ga0065717_100196723300005276Arabidopsis RhizosphereMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0065714_1010053633300005288Miscanthus RhizosphereMTMSKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASIRSQWERDGLPN*
Ga0065712_1012673623300005290Miscanthus RhizosphereARKMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0065715_1001531643300005293Miscanthus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0065707_1027502013300005295Switchgrass RhizosphereMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPN
Ga0070676_1007296353300005328Miscanthus RhizosphereARKMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0070676_1012394813300005328Miscanthus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERD
Ga0070683_10188655513300005329Corn RhizosphereMTISKMTLLGSVVVMAAVIGSGKLAWIHNEPATADHENTTNYVVGPDGGVIGAAPNASIRSQWERDGLPN*
Ga0070677_10000234173300005333Miscanthus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0068869_10094605123300005334Miscanthus RhizosphereMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSI
Ga0070689_10003787713300005340Switchgrass RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSIRSQ
Ga0070669_10006040643300005353Switchgrass RhizosphereAFLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0070675_10221638613300005354Miscanthus RhizosphereMKLLGAAVVASAVIVSVALACFHNGAATADHGNATSYVVGPDGKLIGAAPNPSIRS
Ga0070674_10004806133300005356Miscanthus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPNGRLIGAAPNPSIRSQWERDGLPN*
Ga0070674_10133778323300005356Miscanthus RhizosphereALLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0070673_10079214923300005364Switchgrass RhizosphereMTMSKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNAS
Ga0070659_10006973443300005366Corn RhizosphereMTMRKLTLLGVAVVVAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0070709_1036844423300005434Corn, Switchgrass And Miscanthus RhizosphereMTFLGVAGLTAIMIGSGALAWVHNGATTTDQGNATNYVVVGQDGRLIGATPNASIRSLWEREGLPN*
Ga0070709_1077427913300005434Corn, Switchgrass And Miscanthus RhizosphereMALLGPAVVVAAVIGSVALACLHNGAATADRGNATNYVVGQDGKLIGAAPNPSIRSQWEREGLPN*
Ga0070701_1001522833300005438Corn, Switchgrass And Miscanthus RhizosphereMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0070663_10134837723300005455Corn RhizosphereSNEARKMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0070662_10066494733300005457Corn RhizosphereTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0070699_10127967323300005518Corn, Switchgrass And Miscanthus RhizosphereALLGVAVLAAVVIGSGTLAWVHNGAPTADHENATNYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0070697_10118401313300005536Corn, Switchgrass And Miscanthus RhizosphereMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWE
Ga0070665_10092288923300005548Switchgrass RhizosphereMTMRKLTLLGVAVVVAAVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASIRSQWERDGLPN*
Ga0075023_10050277313300006041WatershedsMILNKMKLLGAVVGAAVVIGSAALAWVHNGAATDDRGDGINYVVGQDGKLIGAAPNPSIRSKWQQEGFPN*
Ga0075026_10010985023300006057WatershedsMILNKMKLLGAVVGAAVVIGSAALAWVHNGAATDDQGDGTNYVVGQDGKLIGATTNPSIRSQWQQEGFPN*
Ga0075018_1053342623300006172WatershedsDMPNASVIPSNEARKMVLSKITLLGAAGGAAIVIGSAALAWVHNGATTAGQGNGTNYVVEQNGKLIGATTNPSIRSQWQQEGFPN*
Ga0075369_1041254923300006186Populus EndosphereMTMSKMTLLGAVVVVAVVIGSGTLAWVHNGAATADHKKASYVVGPDGRSIGAAPNPSIRSQWERDGLPN*
Ga0075422_1000724143300006196Populus RhizosphereMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0079222_1077196213300006755Agricultural SoilMTLLGSAVVMAAVIGSGKLAWIHNEPATADHENTTNYVVGPDGGVIGAAPNASIRSQWERDGLPN*
Ga0075433_1055492823300006852Populus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATNYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0075425_10011710033300006854Populus RhizosphereMTMSKMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENADNYVFGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0075425_10208721013300006854Populus RhizosphereMQQSDYVQHLGVSSNEVRKMTLTKMALLGPAVVVAAVIGSVALACLHNGAATADRGNATNYVVGQDGKLIGAAPNPSIRSQWEREGLPN*
Ga0075426_1022658613300006903Populus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDCLPN*
Ga0075426_1108231413300006903Populus RhizosphereAFHAKQQLGQLRKMTISKMTFFGVAGLTAAVISSGALAWVHNGATPADQGNATNYVVVGQDGRLIGATPNASIRSLWEREGLPN*
Ga0075424_10032738123300006904Populus RhizosphereMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENADNYVFGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0075435_10022902933300007076Populus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVRNGAATADHENADNYVFGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0105251_1010301813300009011Switchgrass RhizosphereMSKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASTRSQWERDGLPN*
Ga0105244_1002740123300009036Miscanthus RhizosphereMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0111539_10005336163300009094Populus RhizosphereMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0105247_1063479823300009101Switchgrass RhizosphereMSKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASIRSQWERDGLPN*
Ga0114129_1316869613300009147Populus RhizosphereMSKMALLGVAVLAAVVIGSGTLAWVQNGAPTADHENATNYVVGPDGGLIGAAPNASIRSQWER
Ga0105243_1159850513300009148Miscanthus RhizosphereMSKMTLLTAVVVVAAVIGSGTLAWIHNEPATADHENATNYVVGPDGALIGAAPNAIIRSQWERNGLPN*
Ga0075423_1004331643300009162Populus RhizosphereMTMSKMALLGVAVVAAGVNGSGRLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0075423_1011041433300009162Populus RhizosphereMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSI
Ga0105238_1262952713300009551Corn RhizosphereMRKLTLLGVAVVVAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0105249_1024507033300009553Switchgrass RhizosphereMSKMALLGVAVVAAGVIGSGMLAWVHNGAATADHENATHYVVGPDGRLIGAAPNP
Ga0134125_1139156213300010371Terrestrial SoilMTLLGAISIVAAVIGSGTFAWIHNEAATADDKTTPNHVVGPAGGLIGSAPNAHIRSQWEREGLPN*
Ga0105239_1013517633300010375Corn RhizosphereMRKLTLLGVAVVAAAVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASIRSQWERDGLPN*
Ga0105239_1117760513300010375Corn RhizosphereMSKMTLLTAVVVVAAVIGSGTLAWIHNEPATADHENATNYVVGPDGALIGAAPNASIRSQWERNGLPN*
Ga0134126_1041720633300010396Terrestrial SoilMRKLTLLGVAVVAAAVIGSGTLAWVHNAAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0134122_1219584713300010400Terrestrial SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYAVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0105246_1110930913300011119Miscanthus RhizosphereKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASTRSQWERDGLPN*
Ga0157340_100091313300012473Arabidopsis RhizosphereKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0157346_100512713300012480Arabidopsis RhizosphereMRKLTLLGVAVVASAVIGSGTLAWVHNEAAPADHENATRYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0157341_101670413300012494Arabidopsis RhizosphereRKMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0157281_100126023300012883SoilMYKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0157294_1004530023300012892SoilMSKMAFLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0157284_1034203223300012893SoilARKMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNASIRSQWERDGLPN*
Ga0157299_1001811723300012899SoilMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATNYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0157306_1041787313300012912SoilMTMSKMALLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIR
Ga0162650_10008171513300012939SoilVVVAALVGSVALACFHNGAATADRGNVTNYVVGQDGKLIGAAPNPSIRSQWEREGLPN*
Ga0164241_1045076613300012943SoilMTMSKLTLLGTAVVAAVVIGSGTHAWVHNGAATADHENAGNYVIGPDGGLIGAAPNPSIRSQWERDGLPE*
Ga0164303_1001711113300012957SoilMTMSKMALLGVAVVAAAVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0164305_1080362323300012989SoilMQQSDHVQHLGVSSNEVRKMTLTKMALLGPAVVVAAVIGSVALACLHNGAATADRGNATNYVVGQDGKLIGAAPNPSIRSQWEREGLPN*
Ga0157378_1215879513300013297Miscanthus RhizosphereMTMRKMALLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN*
Ga0163162_1217373413300013306Switchgrass RhizosphereMTLTKMALLGPAVVVAAVIGSVALACLHNGAATADRGNATNYVVGQDGKLIGAAPNPSIRSHWEREGLPN*
Ga0157375_1017864153300013308Miscanthus RhizosphereMRKLTLLGVAVVVAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSIRSQWERDGLPN*
Ga0075342_100851723300014320Natural And Restored WetlandsMTMRKMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENATHYVDGPDGRLIGAAPNQSIRSQWERDGLPN*
Ga0075353_118763723300014321Natural And Restored WetlandsVISSNEAKKMTISKITLLGAVVVVAAVIGSGTLAWIHNELATTDHENTTNYVVGPDGGVIGAAPSASIRSQWEQDGLPN*
Ga0157377_1054704413300014745Miscanthus RhizosphereMSKMALLGVAVVAAGVIGSGTLAWVHNRAATADHENATPYVVGPDGRLIGAAPNP
Ga0173478_1000479923300015201SoilMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATAYHENATHYVVGPDGRLIGAAPNPSIRSQWGREGLPN*
Ga0132258_1117550523300015371Arabidopsis RhizosphereVIPSNEARNEARKMTMSKITLLAAVVVMAAVIGSGTLAWIHNEPATADHENTTNYVVGPDGGLIGAAPNASIRSQWERDGLPN*
Ga0132258_1220975923300015371Arabidopsis RhizosphereMKLLGAAVVASAVIVSVALACFHNGAATADHGNATSYVVGPDGKLIGAAPNPSIRSHWEREGLPN*
Ga0132258_1370865023300015371Arabidopsis RhizosphereMRKMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENADNYVFGPDGGLIGAAPNQSIRSQWERDGLPN*
Ga0132256_10004200313300015372Arabidopsis RhizosphereMSKMALLGAVVVASVVIGSGTLAWVRNGAVTADHENADNYVFGPDGRLIGAAPTRAYVPS
Ga0132256_10033909713300015372Arabidopsis RhizosphereMRKLTLLGVAVVASAVIGSGTLAWVHNEAAPADHENATRYVVGPDGRLIGAAPNPSIRSQWERDGLPD*
Ga0132256_10132521713300015372Arabidopsis RhizosphereVIPSNEARNEARKMTMSKITLLAAVVVAAAVIGSGTLAWIHNDAPTADHENTTNYVVGPDGGLIGAAPNASIRSQWERDGLPN*
Ga0132256_10247888213300015372Arabidopsis RhizosphereMILSKMKLLGAAVVASAVIVSVALACFHNGAATADHGNATSYVVGPDGKLIGAAPNPSIRSHWEREGLPN*
Ga0132257_10033984643300015373Arabidopsis RhizosphereMSKMTLLGAVVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASIRSQWERDGLPN*
Ga0132257_10067612923300015373Arabidopsis RhizosphereMSKITLLAAVVVMAAVIGSGTLAWIHNEPATADHENTTNYVVGPDGGLIGAAPNASIRSQWERDGLPN*
Ga0132255_10268035513300015374Arabidopsis RhizosphereVIPSNEARNEAKKMTMSKMTLLGAVVVVAAVIGSGTLAWIHNEPATADYENTTNYVVGPDGGLIGAAPNASIRSQWERDGLPN*
Ga0184608_1053437313300018028Groundwater SedimentMTLLGPAVVVAALVGSVALACFHNGAATADRGNVTNYVVGQDGKLIGAAPHRRSVAMFR
Ga0184611_103084223300018067Groundwater SedimentMTLLGPAVVVAALVGSVALACFHNGAATADRGNVTNYVVGQDGKLIGAAPNPSIRSQWEREGLPN
Ga0184635_1000990813300018072Groundwater SedimentMTLLGPAVVVAALVGSVALACFHNGAATADRGSVTNYVVGQDGKLIGAAPNPSIRSQWEREGLPN
Ga0184612_1020924713300018078Groundwater SedimentRQEIMTLTKMTLLGPAVVVAAVVGSVALACFHNGAATADRGNVTNYVVGQDGKLIGAAPNPSIRSQWEREGLPN
Ga0173481_1001104523300019356SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0173482_1035266413300019361SoilMTMSKMAFLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWERDGL
Ga0222622_1017282053300022756Groundwater SedimentMILSKMTLLGAALGVAAVIGSAALAWVHKGAATADHGNATNYVVGQDGKLIGATPNASIRSQWEREGLPN
Ga0247792_101275433300022880SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSI
Ga0247792_101721913300022880SoilMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Ga0247786_115708313300022883SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0247753_100499323300022892SoilARKMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Ga0247787_100720913300022893SoilMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0247788_101567413300022901SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWEREG
Ga0247793_104693013300023066SoilMTMSKMAFLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Ga0247752_100730033300023071SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSIRSQWE
Ga0247799_102899723300023072SoilMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIR
Ga0247754_110614823300023102SoilVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0210131_108925213300025551Natural And Restored WetlandsMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENATHYVDGPDGRLIGAAPNQSIRSQWERDGLPN
Ga0207710_1002282823300025900Switchgrass RhizosphereMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0207699_1028783723300025906Corn, Switchgrass And Miscanthus RhizosphereMTLTKMALLGPAVVVAAVIGSVALACLHNGAATADRGNATNYVVGQDGKLIGAAPNPSIRSQWEREGLPN
Ga0207699_1146701423300025906Corn, Switchgrass And Miscanthus RhizosphereMAISKMTFLGVAGLTAIMIGSGALAWVHNGATTTDQGNATNYVVVGQDGRLIGATPNASIRSLWEREGLPN
Ga0207654_1055931313300025911Corn RhizosphereMTMSKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASIRSQWERDGLPN
Ga0207695_1011777933300025913Corn RhizosphereMTMRELTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0207663_1130553513300025916Corn, Switchgrass And Miscanthus RhizosphereMKILGAVVVTATVIGSGALAWVHRGAATADQGNDTNYVVEQDGKLIGAAHNPNIRSQWQQEGLPN
Ga0207662_1042911413300025918Switchgrass RhizosphereMTMSKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASTRSQWERDGLPN
Ga0207646_1117949513300025922Corn, Switchgrass And Miscanthus RhizosphereMTMSKMTLLGALVVVAVVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGATPNASIRSLWEREGLPN
Ga0207659_1186501823300025926Miscanthus RhizosphereMKLLGAAVVASAVIVSVALACFHNGAATADHGNATSYVVGPDGKLIGAAPNPSIRSHL
Ga0207690_1005465823300025932Corn RhizosphereMTMRKLTLLGVAVVVAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0207690_1012159513300025932Corn RhizosphereMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPS
Ga0207669_1191667013300025937Miscanthus RhizosphereMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATRYVVGPNGRLIGAAPNPSIRSQWERDGLPN
Ga0207704_1007496233300025938Miscanthus RhizosphereMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Ga0207661_1148230023300025944Corn RhizosphereMTISKMTLLGSVVVMAAVIGSGKLAWIHNEPATADHENTTNYVVGPDGGVIGAAPNASIRSQWERDGLPN
Ga0210068_101074913300025953Natural And Restored WetlandsMTMRKMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENATHYVDGPDGRLIGAAPNQSIRSQWERDGLPN
Ga0210116_109207613300025959Natural And Restored WetlandsMTMRKMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENATHYVDGPDGRLIGAAPNQSIR
Ga0207651_1031246433300025960Switchgrass RhizosphereMTMSKMTLLGALVVVAVVIGSGTLAWVHNEAATTDHEKATNYVFGPDGTLIGATPNASIRSQWERDGL
Ga0207639_1016840833300026041Corn RhizosphereMTMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGPAPN
Ga0207597_10165823300026742SoilMTMRKLTLLGVAVVVAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWE
Ga0207473_10270213300026752SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERNGLPN
Ga0207570_100274923300026944SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Ga0207582_100331123300026960SoilMTMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATNYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0209967_105413413300027364Arabidopsis Thaliana RhizosphereMTMSKMALLGVAVLAAVVIGSGTLAWVQNGAPTADHENATNYVVGPDGGLIGAAPNASIRSQWERDGLPN
Ga0207476_10261913300027437SoilEARKMTMSKMAFLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0208890_100153733300027523SoilMTMSKMALLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSI
Ga0209814_1000019343300027873Populus RhizosphereMILSKMKLLGAAVVASAVIVSVALACFNNGAATADHGNATSYVVGPDGKLIGAAPNPSIRSQWEREGLPN
Ga0207428_1026865023300027907Populus RhizosphereMTMSKMTLLGAVVVVAVVIGSGTLAWVHNGAATADHKKASYVVGPDGRSIGAAPNPSIRSQWERDGLPN
Ga0307302_1039333013300028814SoilMMVNKMKLLGAAVGVAVVIGSAALAWVHNGAATDDQGDGTNYVVGQDGKLIGAAPNPSIRSQWQQEGLPN
Ga0075386_1185889413300030916SoilMLSMSWLVVIPSDEARKMIVSKMKLLGATVCLLAVGSAALAWVHRGAETADPGNGTNYVLGQDGILIGAAPNPSVRSQWQREGLPN
(restricted) Ga0255311_102010433300031150Sandy SoilMTMSKMALLGAVVVVAAVIGSGTPAWIHNEPATADHENTTNYVVGPDGGLIGAAPNASIRSQWERDGLPN
(restricted) Ga0255311_115508023300031150Sandy SoilMALLGVAVLAAVVIGSGTLAWVHNGAPTADRENAINYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Ga0307498_1006039613300031170SoilMSWLVVIPSDEARKMIVSKMKLLGATVCLLAVGSAALAWVHRGAETADPGNGTNYVLGQDGKLIGAAPNPSVRSQWQREGLPN
(restricted) Ga0255310_1000724733300031197Sandy SoilMTMSKMALLGVAVLAAVVIGSGTLAWVHNGAPTADRENAINYVVGPDGRLIGAAPNASIRSQWERDGLPN
Ga0307497_1019515823300031226SoilMLSMSWLVVIPSDEARKMIVSKMKLLGATVCLLAVGSAALAWVHRGAETADPGNGTNYVLGQDGKLIGAAPNPSVRSQWQREGPPN
Ga0170824_12867281233300031231Forest SoilMIVSKMKLLGATVCLLAVGSAALAWVHRGAETADPGNGTNYVLGQDGILIGAAPNPSVRSQWQREGLPN
Ga0310813_1005191313300031716SoilMTMSKMTLLGAVVVAAAVIGSGTLAWIHNDAPTADHENTTNYVVGPDGGLIGAAPNASIRSQWERDGLPN
Ga0307468_10005589653300031740Hardwood Forest SoilSNEARKMTMRKMALLGAVVVAAVVIGSGTLAWVRNGAATADHENANNYVFGPDGGLIGAAPNQSIRSQWERDGLPN
Ga0310907_1017842723300031847SoilMTMSKMAFLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPS
Ga0310901_1005978223300031940SoilMTMSKMAFLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSI
Ga0310903_1008627913300032000SoilMRKLTLLGVAVVAAAVIGSGTLAWVHNEAAPADHESATSYVVGPDGRLIGAAPNPSIRSQWERDGLPN
Ga0307471_10008277443300032180Hardwood Forest SoilMTMRKMTLLGAVVVAAVVIGSGTLAWVRNGAATADHENANNYVFGPDGGLIGAAPNQSIRSQWERDGLPN
Ga0326726_1020429023300033433Peat SoilMILSKMKLLGAVVGAAVLIGSAALAWVHNGAATDDQGDGTNYVVGQDGKLIGATTNPSIRSQWQQEGFPN
Ga0326726_1030193023300033433Peat SoilMKLLGAAVGAAAVIGSGALAWVHNGAATAGQGNGTNYVVGQDGKLIGAASNPSIRSQWQREGFPN
Ga0373948_0000126_5082_52883300034817Rhizosphere SoilMSKMALLGVAVVAAGVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Ga0373958_0000391_3544_37833300034819Rhizosphere SoilVIPSNEARKMTMSKMALLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN
Ga0373959_0000656_112_3183300034820Rhizosphere SoilMSKMAFLGVAVVAAVVIGSGTLAWVHNGAATADHENATHYVVGPDGRLIGAAPNPSIRSQWEREGLPN


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