Metagenome Family F035133

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035133
Family Type	Metagenome
Number of Sequences	173
Average Sequence Length	61 residues
Representative Sequence	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII
Number of Associated Samples	142
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	62.43 %
% of genes near scaffold ends (potentially truncated)	36.42 %
% of genes from short scaffolds (< 2000 bps)	82.08 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.445 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.405 % of family members)
Environment Ontology (ENVO)	Unclassified (33.526 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.399 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.74% β-sheet: 0.00% Coil/Unstructured: 71.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF13426	PAS_9	4.62
PF03401	TctC	4.62
PF04392	ABC_sub_bind	3.47
PF13185	GAF_2	3.47
PF03466	LysR_substrate	2.89
PF02729	OTCace_N	1.73
PF00534	Glycos_transf_1	1.73
PF01183	Glyco_hydro_25	1.73
PF03006	HlyIII	1.16
PF05065	Phage_capsid	1.16
PF04321	RmlD_sub_bind	1.16
PF09084	NMT1	1.16
PF00072	Response_reg	1.16
PF13628	DUF4142	0.58
PF00668	Condensation	0.58
PF08734	GYD	0.58
PF07883	Cupin_2	0.58
PF13531	SBP_bac_11	0.58
PF13649	Methyltransf_25	0.58
PF10282	Lactonase	0.58
PF04828	GFA	0.58
PF01757	Acyl_transf_3	0.58
PF00239	Resolvase	0.58
PF13460	NAD_binding_10	0.58
PF06912	DUF1275	0.58
PF13302	Acetyltransf_3	0.58
PF00486	Trans_reg_C	0.58
PF13579	Glyco_trans_4_4	0.58
PF13472	Lipase_GDSL_2	0.58
PF07369	DUF1488	0.58
PF05521	Phage_H_T_join	0.58
PF12071	DUF3551	0.58
PF13432	TPR_16	0.58
PF02627	CMD	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.62
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.47
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	2.31
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	2.31
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	2.31
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	1.73
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	1.16
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	1.16
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.16
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	1.16
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.16
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.58
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.58
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.58
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.58
COG1020	EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.58
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.58
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.58
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
All Organisms	root	All Organisms	48.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
cellular organisms	root	All Organisms → cellular organisms	48.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.16 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.17 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.16 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.58 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.18 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.16 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.16 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.20 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	2.89 %
unclassified Spartobacteria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.16 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.16 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.58 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.58 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.58 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.58 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.62 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.89 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.16 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	0.58 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.58 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.58 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.58 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.58 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.58 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	2.89 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.73 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	1.73 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.16 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.58 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.58 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.58 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.58 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	0.58 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.58 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	2.89 %
Bradyrhizobium sp. cf659	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	1.73 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	1.73 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.16 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.58 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.58 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.58 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.58 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	0.58 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.58 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	2.89 %
Bradyrhizobium sp. cf659	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	1.73 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	1.73 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.16 %
unclassified Myxococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → unclassified Myxococcus	0.58 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.58 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.58 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.58 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	0.58 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.58 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.45 %
Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	2.89 %
Bradyrhizobium sp. cf659	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	1.73 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	1.73 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.16 %
Myxococcus sp. RHSTA-1-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → unclassified Myxococcus → Myxococcus sp. RHSTA-1-4	0.58 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.58 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.58 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.58 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	0.58 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.58 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.58 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.58 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_377348_length_1283_cov_4.921278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1315	Open in IMG/M
2162886007\|SwRhRL2b_contig_559658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	980	Open in IMG/M
2162886012\|MBSR1b_contig_9372800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3280	Open in IMG/M
2170459019\|G14TP7Y01BUOW2	Not Available	521	Open in IMG/M
2209111006\|2214786879	All Organisms → cellular organisms → Bacteria → Proteobacteria	2314	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2245936	Not Available	531	Open in IMG/M
3300000041\|ARcpr5oldR_c006670	Not Available	983	Open in IMG/M
3300000043\|ARcpr5yngRDRAFT_c000491	All Organisms → cellular organisms → Bacteria → Proteobacteria	5098	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10804177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	629	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11120765	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101584419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1178	Open in IMG/M
3300000955\|JGI1027J12803_103950520	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300000956\|JGI10216J12902_114880998	Not Available	544	Open in IMG/M
3300003994\|Ga0055435_10059328	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300003995\|Ga0055438_10022764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1437	Open in IMG/M
3300004114\|Ga0062593_100164680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1707	Open in IMG/M
3300004156\|Ga0062589_100255747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	1317	Open in IMG/M
3300004156\|Ga0062589_100988383	Not Available	785	Open in IMG/M
3300004156\|Ga0062589_101087481	Not Available	755	Open in IMG/M
3300004157\|Ga0062590_102600567	Not Available	538	Open in IMG/M
3300004463\|Ga0063356_101520522	Not Available	992	Open in IMG/M
3300004463\|Ga0063356_101531234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	989	Open in IMG/M
3300004463\|Ga0063356_102933245	Not Available	735	Open in IMG/M
3300004479\|Ga0062595_100874705	Not Available	753	Open in IMG/M
3300005146\|Ga0066817_1025358	Not Available	568	Open in IMG/M
3300005162\|Ga0066814_10068448	Not Available	618	Open in IMG/M
3300005165\|Ga0066869_10101744	Not Available	576	Open in IMG/M
3300005168\|Ga0066809_10003863	All Organisms → cellular organisms → Bacteria → Proteobacteria	2540	Open in IMG/M
3300005213\|Ga0068998_10118596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300005276\|Ga0065717_1005815	Not Available	849	Open in IMG/M
3300005277\|Ga0065716_1000251	Not Available	1715	Open in IMG/M
3300005294\|Ga0065705_10131206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2447	Open in IMG/M
3300005328\|Ga0070676_10000023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	47258	Open in IMG/M
3300005329\|Ga0070683_102434778	Not Available	502	Open in IMG/M
3300005330\|Ga0070690_100001199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13393	Open in IMG/M
3300005332\|Ga0066388_100298194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2256	Open in IMG/M
3300005332\|Ga0066388_100972020	Not Available	1417	Open in IMG/M
3300005334\|Ga0068869_100615465	Not Available	919	Open in IMG/M
3300005336\|Ga0070680_100022582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5013	Open in IMG/M
3300005336\|Ga0070680_100427187	Not Available	1130	Open in IMG/M
3300005339\|Ga0070660_100000903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19856	Open in IMG/M
3300005339\|Ga0070660_101493527	Not Available	574	Open in IMG/M
3300005344\|Ga0070661_100661910	Not Available	848	Open in IMG/M
3300005367\|Ga0070667_100000466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41622	Open in IMG/M
3300005406\|Ga0070703_10092452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	1051	Open in IMG/M
3300005445\|Ga0070708_100016127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6192	Open in IMG/M
3300005457\|Ga0070662_100462348	Not Available	1055	Open in IMG/M
3300005457\|Ga0070662_101519030	Not Available	578	Open in IMG/M
3300005459\|Ga0068867_100442497	Not Available	1105	Open in IMG/M
3300005471\|Ga0070698_101837240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	559	Open in IMG/M
3300005518\|Ga0070699_100979882	All Organisms → cellular organisms → Bacteria → Proteobacteria	775	Open in IMG/M
3300005535\|Ga0070684_101138429	Not Available	734	Open in IMG/M
3300005547\|Ga0070693_100022598	All Organisms → cellular organisms → Bacteria	3347	Open in IMG/M
3300005548\|Ga0070665_100497138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1231	Open in IMG/M
3300005617\|Ga0068859_100137745	All Organisms → cellular organisms → Bacteria	2514	Open in IMG/M
3300005713\|Ga0066905_100251800	All Organisms → cellular organisms → Bacteria → Proteobacteria	1358	Open in IMG/M
3300005713\|Ga0066905_100965544	Not Available	749	Open in IMG/M
3300005719\|Ga0068861_101387187	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300005937\|Ga0081455_10006647	All Organisms → cellular organisms → Bacteria	12361	Open in IMG/M
3300006844\|Ga0075428_100388326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	1496	Open in IMG/M
3300006854\|Ga0075425_100193524	All Organisms → cellular organisms → Bacteria → Proteobacteria	2337	Open in IMG/M
3300006969\|Ga0075419_10817979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	668	Open in IMG/M
3300009011\|Ga0105251_10042470	All Organisms → cellular organisms → Bacteria → Proteobacteria	2206	Open in IMG/M
3300009148\|Ga0105243_12318763	Not Available	574	Open in IMG/M
3300009156\|Ga0111538_10616148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1376	Open in IMG/M
3300009162\|Ga0075423_10330242	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300009162\|Ga0075423_10418375	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300010046\|Ga0126384_10784691	Not Available	851	Open in IMG/M
3300010362\|Ga0126377_11008710	Not Available	899	Open in IMG/M
3300010371\|Ga0134125_10734397	Not Available	1088	Open in IMG/M
3300010397\|Ga0134124_10129624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2229	Open in IMG/M
3300010399\|Ga0134127_10742178	Not Available	1026	Open in IMG/M
3300010403\|Ga0134123_11849434	Not Available	658	Open in IMG/M
3300012285\|Ga0137370_10178460	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300012478\|Ga0157328_1028347	Not Available	516	Open in IMG/M
3300012480\|Ga0157346_1004409	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300012486\|Ga0157331_1034424	Not Available	520	Open in IMG/M
3300012489\|Ga0157349_1007307	Not Available	820	Open in IMG/M
3300012490\|Ga0157322_1021658	Not Available	624	Open in IMG/M
3300012495\|Ga0157323_1002764	Not Available	1004	Open in IMG/M
3300012896\|Ga0157303_10117759	Not Available	669	Open in IMG/M
3300012911\|Ga0157301_10323503	Not Available	571	Open in IMG/M
3300012957\|Ga0164303_10342793	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300012957\|Ga0164303_10503611	Not Available	776	Open in IMG/M
3300012958\|Ga0164299_10434310	Not Available	854	Open in IMG/M
3300012958\|Ga0164299_11063976	Not Available	601	Open in IMG/M
3300012984\|Ga0164309_10684309	Not Available	812	Open in IMG/M
3300012987\|Ga0164307_10015449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3825	Open in IMG/M
3300014299\|Ga0075303_1028655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	861	Open in IMG/M
3300014308\|Ga0075354_1014694	Not Available	1185	Open in IMG/M
3300015371\|Ga0132258_10137357	All Organisms → cellular organisms → Bacteria	5843	Open in IMG/M
3300015371\|Ga0132258_11269665	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300015371\|Ga0132258_11687902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1598	Open in IMG/M
3300015371\|Ga0132258_11746668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1569	Open in IMG/M
3300015371\|Ga0132258_13508535	Not Available	1074	Open in IMG/M
3300015372\|Ga0132256_100017858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6255	Open in IMG/M
3300015372\|Ga0132256_101379116	Not Available	817	Open in IMG/M
3300015372\|Ga0132256_102381630	Not Available	632	Open in IMG/M
3300015373\|Ga0132257_100072199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3907	Open in IMG/M
3300015374\|Ga0132255_102607579	Not Available	772	Open in IMG/M
3300015374\|Ga0132255_103295076	Not Available	688	Open in IMG/M
3300019356\|Ga0173481_10122812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1033	Open in IMG/M
3300019361\|Ga0173482_10000007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36692	Open in IMG/M
3300019361\|Ga0173482_10022642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → unclassified Myxococcus → Myxococcus sp. RHSTA-1-4	1805	Open in IMG/M
3300022899\|Ga0247795_1000110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12572	Open in IMG/M
3300023260\|Ga0247798_1002460	All Organisms → cellular organisms → Bacteria → Proteobacteria	2251	Open in IMG/M
3300023261\|Ga0247796_1000009	All Organisms → cellular organisms → Bacteria → Proteobacteria	38891	Open in IMG/M
3300023261\|Ga0247796_1002198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2466	Open in IMG/M
3300025538\|Ga0210132_1010728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300025899\|Ga0207642_10396060	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300025907\|Ga0207645_10580392	Not Available	761	Open in IMG/M
3300025912\|Ga0207707_10263924	Not Available	1493	Open in IMG/M
3300025919\|Ga0207657_10245358	Not Available	1429	Open in IMG/M
3300025920\|Ga0207649_10994725	Not Available	660	Open in IMG/M
3300025923\|Ga0207681_11141660	Not Available	654	Open in IMG/M
3300025930\|Ga0207701_10196248	All Organisms → cellular organisms → Bacteria → Proteobacteria	1775	Open in IMG/M
3300025930\|Ga0207701_10221750	Not Available	1656	Open in IMG/M
3300025930\|Ga0207701_10568371	Not Available	967	Open in IMG/M
3300025934\|Ga0207686_11516722	Not Available	553	Open in IMG/M
3300025937\|Ga0207669_11547789	Not Available	566	Open in IMG/M
3300025938\|Ga0207704_11625927	Not Available	555	Open in IMG/M
3300025944\|Ga0207661_10478375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1137	Open in IMG/M
3300025960\|Ga0207651_11211355	Not Available	678	Open in IMG/M
3300026047\|Ga0208658_1020539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300026078\|Ga0207702_10305308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	1511	Open in IMG/M
3300026089\|Ga0207648_10194777	Not Available	1797	Open in IMG/M
3300026095\|Ga0207676_12495885	Not Available	514	Open in IMG/M
3300026344\|Ga0256800_1012969	Not Available	519	Open in IMG/M
3300026452\|Ga0256821_1003467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1420	Open in IMG/M
3300026464\|Ga0256814_1043537	Not Available	560	Open in IMG/M
3300026733\|Ga0207550_100971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	810	Open in IMG/M
3300026827\|Ga0207591_106567	Not Available	580	Open in IMG/M
3300026841\|Ga0207490_1007131	Not Available	576	Open in IMG/M
3300026905\|Ga0207516_1004813	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300026995\|Ga0208761_1016843	Not Available	672	Open in IMG/M
3300026995\|Ga0208761_1026834	Not Available	570	Open in IMG/M
3300027036\|Ga0207467_1002411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1	1264	Open in IMG/M
3300027401\|Ga0208637_1003029	Not Available	1415	Open in IMG/M
3300027427\|Ga0207472_101979	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300027523\|Ga0208890_1019193	Not Available	973	Open in IMG/M
3300027873\|Ga0209814_10123132	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300027876\|Ga0209974_10049068	Not Available	1416	Open in IMG/M
3300027876\|Ga0209974_10425865	Not Available	524	Open in IMG/M
3300028379\|Ga0268266_10839538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	888	Open in IMG/M
3300028381\|Ga0268264_10680888	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300028597\|Ga0247820_11167255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	555	Open in IMG/M
3300028802\|Ga0307503_10579679	Not Available	616	Open in IMG/M
3300028807\|Ga0307305_10113246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	1253	Open in IMG/M
3300028889\|Ga0247827_10833646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	614	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1003619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2969	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1005266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2525	Open in IMG/M
3300031226\|Ga0307497_10266433	Not Available	772	Open in IMG/M
3300031231\|Ga0170824_118727636	All Organisms → cellular organisms → Bacteria → Proteobacteria	1601	Open in IMG/M
3300031231\|Ga0170824_122736986	Not Available	595	Open in IMG/M
3300031474\|Ga0170818_105975127	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	742	Open in IMG/M
3300031547\|Ga0310887_10365177	Not Available	841	Open in IMG/M
3300031716\|Ga0310813_11050808	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300031716\|Ga0310813_11713197	Not Available	589	Open in IMG/M
3300031854\|Ga0310904_11215960	Not Available	543	Open in IMG/M
3300031858\|Ga0310892_10323149	Not Available	981	Open in IMG/M
3300031908\|Ga0310900_10842457	Not Available	744	Open in IMG/M
3300031940\|Ga0310901_10193477	Not Available	806	Open in IMG/M
3300032013\|Ga0310906_10755363	Not Available	683	Open in IMG/M
3300032075\|Ga0310890_10132728	Not Available	1620	Open in IMG/M
3300032075\|Ga0310890_10356876	Not Available	1071	Open in IMG/M
3300032174\|Ga0307470_10798681	Not Available	731	Open in IMG/M
3300032179\|Ga0310889_10001022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6910	Open in IMG/M
3300032180\|Ga0307471_103310987	Not Available	571	Open in IMG/M
3300032180\|Ga0307471_103795543	Not Available	534	Open in IMG/M
3300032421\|Ga0310812_10276465	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300033004\|Ga0335084_12426305	Not Available	505	Open in IMG/M
3300033513\|Ga0316628_100165376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	2611	Open in IMG/M
3300034090\|Ga0326723_0393441	Not Available	629	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.01%
Host-Associated	Host-Associated	36.42%
Engineered	Engineered	0.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.96%
Plants	Host-Associated → Plants	36.42%
Aquatic	Environmental → Aquatic	4.05%
Solid Waste	Engineered → Solid Waste	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.18%
Marine	Environmental → Aquatic → Marine	2.31%
Freshwater	Environmental → Aquatic → Freshwater	1.73%
Peat	Environmental → Terrestrial → Peat	0.58%
Grass	Engineered → Solid Waste → Grass	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.40%
Loam	Environmental → Terrestrial → Soil → Loam	9.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.73%
Sand	Environmental → Terrestrial → Soil → Sand	1.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.58%
Composting	Engineered → Solid Waste → Grass → Composting	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.73%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.58%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.05%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.73%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.16%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.58%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.58%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.58%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.58%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.58%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.58%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012478	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610	Host-Associated	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026047	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026344	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 C5	Environmental	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300026733	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A1-12 (SPAdes)	Environmental	Open in IMG/M
3300026827	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes)	Environmental	Open in IMG/M
3300026841	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-10 (SPAdes)	Environmental	Open in IMG/M
3300026905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-10 (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027036	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027427	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00765160	2140918013	Soil	MSNTFEKWSSRVAVAARVAQERRRPENWNEMPEEEYDQPLDKVEVQTKAAKWPWNVYII
SwRhRL2b_0395.00007420	2162886007	Switchgrass Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTK
MBSR1b_0362.00005590	2162886012	Miscanthus Rhizosphere	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
4MG_05180150	2170459019	Switchgrass, Maize And Mischanthus Litter	MANAFTEWTSRTAIAARITQERQVESWNELAATEDYDLSLDKIEYQIRPAKWPWLVYII
2213811589	2209111006	Arabidopsis Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELXXPEDXDLSLDKIEYQIRPXKWPWLVYII
ICChiseqgaiiDRAFT_22459362	3300000033	Soil	LRLEVPMANVFTDWTSRSAIAARIAEEREHPVESWNELIAPEDYDLPFDKIEYQVRPAKWPWLV
ARcpr5oldR_0066703	3300000041	Arabidopsis Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII*
ARcpr5yngRDRAFT_0004911	3300000043	Arabidopsis Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELXXPEDXDLSLDKIEYQIRPXKWPWLVYII*
ICChiseqgaiiFebDRAFT_108041772	3300000363	Soil	MSNTFEKWSSRVAVAARVAQERRRPENWNEMPEEEYDQPLDKVEVQTKAAKWPWNVYII*
ICChiseqgaiiFebDRAFT_111207652	3300000363	Soil	MNSKELEAPMSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDMPLDKAEYQTRPAKWPWQVYII*
INPhiseqgaiiFebDRAFT_1015844191	3300000364	Soil	MANVFTDWTSRAAIASRIAEEQRNPVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII*
JGI1027J12803_1039505201	3300000955	Soil	MRHMNSKRLEVPMANVFTDWTSRAAIASRIAEEQRNPVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII*
JGI10216J12902_1148809981	3300000956	Soil	MSDTFTNWTSRAAVARRVAEERRRPEIWNELTIPDDYDMPLDKAEYQTRPAKWPWQVYII
Ga0055435_100593283	3300003994	Natural And Restored Wetlands	MASAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHII*
Ga0055438_100227643	3300003995	Natural And Restored Wetlands	MASAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPW
Ga0062593_1001646803	3300004114	Soil	MANAFMDWTSRVAIDARIAEEQRHPVESWNELVVPEDYDLSLDKIEYQIKPAKWPWLVHII*
Ga0062589_1002557472	3300004156	Soil	TSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0062589_1009883831	3300004156	Soil	MANIFTDWTSRTAIAARIAAERQSPVESWNELTVPEDYDLSFDKIEYQIKPAKWPWLVHII*
Ga0062589_1010874811	3300004156	Soil	MANAFTEWTSRTAIAARITQERQVESWNELAATEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0062590_1026005671	3300004157	Soil	MANVFTDWTSRTAIAARIAEERKVESWNELAAAEDYDLSLEKIEYQIRPAKWPWLVYII*
Ga0063356_1015205222	3300004463	Arabidopsis Thaliana Rhizosphere	MANVFVDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLDKIEYQIKPAKWPWLVHII*
Ga0063356_1015312343	3300004463	Arabidopsis Thaliana Rhizosphere	MANAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLDKVEYQIKPAKWPWLVHII*
Ga0063356_1029332451	3300004463	Arabidopsis Thaliana Rhizosphere	MANIFTDWTSRSAIAARIAEEREHPVESWNELNAPEDYDLSFDKIEYQIRPARWPWLVHII*
Ga0062595_1008747051	3300004479	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPADYDLSLDKIEYQIRPAKWP
Ga0066817_10253581	3300005146	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPADYDLSLDTIEYQIRPAKWPWLVYII*
Ga0066814_100684481	3300005162	Soil	MANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYVI*
Ga0066869_101017441	3300005165	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII*
Ga0066809_100038634	3300005168	Soil	MANVFTDWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVYII
Ga0068998_101185961	3300005213	Natural And Restored Wetlands	MASAFMDWTSRTAIDARIAEEQRHPVESWKELIVPEDYDLSLEKIEYQIKPAKWPWLVHII*
Ga0065717_10058153	3300005276	Arabidopsis Rhizosphere	DVPMANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII*
Ga0065716_10002512	3300005277	Arabidopsis Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII*
Ga0065705_101312061	3300005294	Switchgrass Rhizosphere	DVPMANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0070676_1000002364	3300005328	Miscanthus Rhizosphere	FTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0070683_1024347781	3300005329	Corn Rhizosphere	MRHNAKRLDVHMANVFTDWTSRTAIAARIAEEWQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYIISKVGARQERTAC
Ga0070690_1000011998	3300005330	Switchgrass Rhizosphere	MAKVFTDWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0066388_1002981943	3300005332	Tropical Forest Soil	MANVFTDWTSRAAIATRITEERQNPVESWNELAAPEDYDLSLDKIEYQIKPAKWPWLVHII*
Ga0066388_1009720203	3300005332	Tropical Forest Soil	MRHMNSKWLEVLMANAFTDWTSRAAIAARIAEEQRNPVESWNELEAPEDYELPFDKIEYQIRPAKWPWLVYII*
Ga0068869_1006154652	3300005334	Miscanthus Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPTKWPWLVYII*
Ga0070680_1000225828	3300005336	Corn Rhizosphere	KRLEVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0070680_1004271872	3300005336	Corn Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0070660_10000090327	3300005339	Corn Rhizosphere	MAKVFTHWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0070660_1014935271	3300005339	Corn Rhizosphere	MLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*
Ga0070661_1006619101	3300005344	Corn Rhizosphere	MLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*LRADLMFP
Ga0070667_10000046660	3300005367	Switchgrass Rhizosphere	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0070703_100924521	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	AKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0070708_1000161271	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	EVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0070662_1004623481	3300005457	Corn Rhizosphere	MLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*LRADL
Ga0070662_1015190301	3300005457	Corn Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWP
Ga0068867_1004424972	3300005459	Miscanthus Rhizosphere	MANAFTDWTSRAAIAARVAEEQRNPVESWNELEAPEDYDLSFDKVEYQIRPAKWPWLLYII*
Ga0070698_1018372402	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0070699_1009798821	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSSDKVEYEIKPAKWPWLVHII*
Ga0070684_1011384291	3300005535	Corn Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0070693_1000225984	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNSKHWRMLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*
Ga0070665_1004971382	3300005548	Switchgrass Rhizosphere	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYDIKPAKWPWLVHII*
Ga0068859_1001377451	3300005617	Switchgrass Rhizosphere	CSKRLEVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0066905_1002518001	3300005713	Tropical Forest Soil	VKSKRLEVPMANVFTDWTSRAAIAARIAEEQQNPVEGWNELVVPEDYDLSFNKIEYQIRPAKWPWLVYII*
Ga0066905_1009655441	3300005713	Tropical Forest Soil	MANAFTDWTSRAAIAARIAEEQRNPVESWNELEAPEDYELPFDKIEYQIRPAKWPWLVYII*
Ga0068861_1013871872	3300005719	Switchgrass Rhizosphere	MANAFMDWTSRVAIDARIAEEQRHPVESWNELVVPEDYDLSLDKIEYQIKPAK
Ga0081455_1000664715	3300005937	Tabebuia Heterophylla Rhizosphere	MPNVFTDWTSRAAITARIAEEQRHSVESWNELEAPEDYDLSFDKIEYQIRPAKWPWLVHII*
Ga0075428_1003883262	3300006844	Populus Rhizosphere	MSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDMPLDKAEYQTRPAKWPWQVYII
Ga0075425_1001935244	3300006854	Populus Rhizosphere	MESKRLEVPMANVFTDWTSRAAIAARIAEEQRAPVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII*
Ga0075419_108179792	3300006969	Populus Rhizosphere	MSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDTPLDKAEYQTRPAKWPWQVYII
Ga0105251_100424704	3300009011	Switchgrass Rhizosphere	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPA
Ga0105243_123187631	3300009148	Miscanthus Rhizosphere	ANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0111538_106161483	3300009156	Populus Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAGPDDYDLSFDKIEYQIRPAKWPWLVYII*
Ga0075423_103302424	3300009162	Populus Rhizosphere	MNSKELEAPMSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDTPLDKAEYQTRPAKWPWQVYII*
Ga0075423_104183751	3300009162	Populus Rhizosphere	AIAARIAEEQRAPVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII*
Ga0126384_107846912	3300010046	Tropical Forest Soil	MLVNTFWTSRVAIAARISEEQRCPESWNELAAPEDYDLPLDKIDYQIRPAKWPWQVYII*
Ga0126377_110087101	3300010362	Tropical Forest Soil	MANLFMDWTSRVAIAARVEEERCHPVESWNELTAPEDYDLPFDKVEYQVRPAKWPWLVYII*
Ga0134125_107343972	3300010371	Terrestrial Soil	MANAFTDWTSRAAIAARVAEEQRNPVESWNELEAPEDYDLSLDKVEYQIRPAKWPWLLYII*
Ga0134124_101296241	3300010397	Terrestrial Soil	RTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII*
Ga0134127_107421782	3300010399	Terrestrial Soil	WTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*
Ga0134123_118494341	3300010403	Terrestrial Soil	TDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII*
Ga0137370_101784602	3300012285	Vadose Zone Soil	MNSKELEAPMSDTLMNWTSRAAVARRVAEERRRPESWNELTILTIRDDDDLPLDKAEYQTRPAKWPWQVYII*
Ga0157328_10283471	3300012478	Arabidopsis Rhizosphere	RTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII*
Ga0157346_10044092	3300012480	Arabidopsis Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYVI*
Ga0157331_10344241	3300012486	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRP
Ga0157349_10073071	3300012489	Unplanted Soil	MNSKQLEVNMANVFADWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0157322_10216581	3300012490	Arabidopsis Rhizosphere	LDVPMANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0157323_10027642	3300012495	Arabidopsis Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0157303_101177591	3300012896	Soil	MANVFTDWTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0157301_103235031	3300012911	Soil	PMANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII
Ga0164303_103427931	3300012957	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYVI*
Ga0164303_105036111	3300012957	Soil	MANVFTHRPSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII*
Ga0164299_104343101	3300012958	Soil	DVPMANVFTDRTSRTAIAARIAEERKVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII*
Ga0164299_110639761	3300012958	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYIS*
Ga0164309_106843092	3300012984	Soil	FWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*
Ga0164307_100154495	3300012987	Soil	MLGNAFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII*
Ga0075303_10286552	3300014299	Natural And Restored Wetlands	AAIDDRIAEEQRHTVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHII*
Ga0075354_10146942	3300014308	Natural And Restored Wetlands	MNSEQLEAPMANAFIDWTSRAAIATRIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHII*
Ga0132258_101373574	3300015371	Arabidopsis Rhizosphere	MANAFTDWTSRTAIAARIREERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0132258_112696652	3300015371	Arabidopsis Rhizosphere	MNSKQLEVPMANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYVI*
Ga0132258_116879023	3300015371	Arabidopsis Rhizosphere	MANAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHII*
Ga0132258_117466681	3300015371	Arabidopsis Rhizosphere	MNSKHWRMLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKIEYQIRPAKWPWQVYII*
Ga0132258_135085353	3300015371	Arabidopsis Rhizosphere	MNSKQLEVNMANVFADWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVYII*
Ga0132256_1000178582	3300015372	Arabidopsis Rhizosphere	MLMANVFTNWTSRAAIAARIAEEQRNPIESWNELEAVEDYDLSLDKIEYQIRPAKWPWLVHII*
Ga0132256_1013791162	3300015372	Arabidopsis Rhizosphere	MNSKQLEVPMANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII*
Ga0132256_1023816301	3300015372	Arabidopsis Rhizosphere	MNSKRLEAPMANVFTDWTSRAAIASRIAEEQRNSVESWNELEAPEDYDLSFEKIEYQIRPAKWPWLVYII*
Ga0132257_1000721995	3300015373	Arabidopsis Rhizosphere	MAKVFTDWPSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII*
Ga0132255_1026075792	3300015374	Arabidopsis Rhizosphere	MANVFTDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII*
Ga0132255_1032950761	3300015374	Arabidopsis Rhizosphere	MAKVFADQTSRTAIDARIAEERQNPVESWNELTAAREDNDLSFDKVEYDIKPAKWPWLVHII*
Ga0173481_101228122	3300019356	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII
Ga0173482_1000000718	3300019361	Soil	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSSDKVEYEIKPAKWPWLVHII
Ga0173482_100226423	3300019361	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII
Ga0247795_10001101	3300022899	Soil	TDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
Ga0247798_10024601	3300023260	Soil	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWL
Ga0247796_100000922	3300023261	Soil	MAKVFTDWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
Ga0247796_10021983	3300023261	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII
Ga0210132_10107282	3300025538	Natural And Restored Wetlands	MASAFMDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLEKIEYQIKPAKWPWLVHI
Ga0207642_103960602	3300025899	Miscanthus Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRP
Ga0207645_105803922	3300025907	Miscanthus Rhizosphere	KRLDVPMANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII
Ga0207707_102639243	3300025912	Corn Rhizosphere	MNSKHWRMLVNTFWTSRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII
Ga0207657_102453582	3300025919	Corn Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPTKWPWLVYII
Ga0207649_109947251	3300025920	Corn Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWPWLVYII
Ga0207681_111416601	3300025923	Switchgrass Rhizosphere	RTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII
Ga0207701_101962482	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MANAFMDWTSRVAIDARIAEEQRHPVESWNELVVPEDYDLSLDKIEYQIKPAKWPWLVHI
Ga0207701_102217503	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MANAFTDWTSRLSLRVAEEQRNPVESWNELEAPEDYDLSLDKVEYQIRPAKWPWLLYII
Ga0207701_105683712	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	PMANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPAKWPWLVYII
Ga0207686_115167221	3300025934	Miscanthus Rhizosphere	PMANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPTKWPWLVYII
Ga0207669_115477891	3300025937	Miscanthus Rhizosphere	TDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII
Ga0207704_116259271	3300025938	Miscanthus Rhizosphere	SRVAIAARIAEERRCPESWNELTAPEDYDLPLDKVEYQIRPAKWPWQVYII
Ga0207661_104783753	3300025944	Corn Rhizosphere	MANVFTDWTSRTAIAARIAEEWQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII
Ga0207651_112113551	3300025960	Switchgrass Rhizosphere	MANVFTDRTSRTAIAARIAEERQVESWNELSVPEDYDLSLDKIEYQIRPAKWPWLVYII
Ga0208658_10205392	3300026047	Natural And Restored Wetlands	TRHMNSEQLEAPMANAFIDWTSRAAIATRIAEEQRHPVESWKELIVPEDYDLSLEKIEYQIKPAKWPWLVHII
Ga0207702_103053081	3300026078	Corn Rhizosphere	PMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
Ga0207648_101947772	3300026089	Miscanthus Rhizosphere	MANAFTDWTSRAAIAARVAEEQRNPVESWNELEAPEDYDLSFDKVEYQIRPAKWPWLLYI
Ga0207676_124958851	3300026095	Switchgrass Rhizosphere	FTYRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII
Ga0256800_10129691	3300026344	Sediment	MANIFTDWTSRAAVAARIAEEQQNPVESWNELVAPEDYDLSFDRNEYQIRPAKWPWLVHI
Ga0256821_10034672	3300026452	Sediment	MASAFMDWTSRAAIDARIAEEQQHPVGSWNELIVPEDYDLSLEKIEYQIKPAK
Ga0256814_10435372	3300026464	Sediment	MANIFTDWTSRAAVAARIAEEQQNPVESWNELVAPEDYDLSFDRIEYQIRPAKWPWLVHI
Ga0207550_1009712	3300026733	Soil	KVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
Ga0207591_1065671	3300026827	Soil	TDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII
Ga0207490_10071311	3300026841	Soil	MAKVFTHWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
Ga0207516_10048131	3300026905	Soil	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKW
Ga0208761_10168432	3300026995	Soil	DVRVIRTAIAARIAEERQVESWNELAAPADYDLSLDTIEYQIRPAKWPWLVYII
Ga0208761_10268341	3300026995	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPADYDLSLDTIEYQIRPAK
Ga0207467_10024111	3300027036	Soil	LEVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
Ga0208637_10030292	3300027401	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII
Ga0207472_1019791	3300027427	Soil	MAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWP
Ga0208890_10191932	3300027523	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPADYDLSLDTIEYQIRPAKWPWLVYII
Ga0209814_101231323	3300027873	Populus Rhizosphere	MNSKELEAPMSDTFTNWTSRAAVARRVAEERRRPESWNELTIPDDYDMPLDKAEYQTRPAKWPWQVYII
Ga0209974_100490682	3300027876	Arabidopsis Thaliana Rhizosphere	MANVFTDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII
Ga0209974_104258651	3300027876	Arabidopsis Thaliana Rhizosphere	VSNTFTDWTSRVAIAARVAEERRRPENWNELTTPEDYDLPLDKAEYQTRPAKWPWQVYII
Ga0268266_108395382	3300028379	Switchgrass Rhizosphere	MAKVFTDWTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYDIKPAKWPWLVHII
Ga0268264_106808882	3300028381	Switchgrass Rhizosphere	DRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYII
Ga0247820_111672552	3300028597	Soil	VPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
Ga0307503_105796791	3300028802	Soil	MRQTNSKQLEVPMANVFTDWTSRTVIAARIAEERRNPVESWNELTAAEDYDLSLDKIEYQIRPARWPWLVYII
Ga0307305_101132462	3300028807	Soil	MNSKELEAPMSDTLTNWTSRAAVARRVAEERRRPESWNELTILTIPDDYDLPLDKAEYQTRPAKWPWQVYII
Ga0247827_108336461	3300028889	Soil	CDHETPKRLEVPMAKVFTDRTSRTAIDARIAEERRNPVESWNELTAAREDNDLSFDKVEYEIKPAKWPWLVHII
(restricted) Ga0255311_10036192	3300031150	Sandy Soil	MANVFTDWTSRTAIAARIAEERQNPVESWNELAAAREDYDLSFDKIEYEMKPAKWPWLVHII
(restricted) Ga0255311_10052666	3300031150	Sandy Soil	MANVFTDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKVEYQIRPAKWPWLVYII
Ga0307497_102664331	3300031226	Soil	MSNTFLDWTSRVAIAARIAEEQRRPECWNELTTPEDYDLPLDKAEYQIRAAKWPWQIYII
Ga0170824_1187276363	3300031231	Forest Soil	MSNTFLDWTSRVAIAARIAEEQRRPECWNELTTPEDYDLPLDKAEYQIRAAKWPWQVYII
Ga0170824_1227369861	3300031231	Forest Soil	MANVFTDWTSRAVIAARIAEERRNPVESWNELTAPEDYDLSLDKIEYQIRPARWPWLVYI
Ga0170818_1059751273	3300031474	Forest Soil	MRQMNSEQLEVPMANVFTDWTSRTVIAARIAEERRNPVESWNELTAAEDYDLSLDKIEYQIRPARWPWLVYII
Ga0310887_103651772	3300031547	Soil	MANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYI
Ga0310813_110508081	3300031716	Soil	MANIFTDWTSRSAIAARIAEEREHPVESWNELIAPEDYDLPFDKIEYQIKPAKWPWLVHI
Ga0310813_117131972	3300031716	Soil	WTSRSAIAARIAEEREHPVESWNELNAPEDYDLSFDKIEYQIRPARWPWLVHII
Ga0310904_112159601	3300031854	Soil	VPMANVFTDRTSRTAIAARIAEERQVESWNELAVPEDYDLSLDKIEYQIRPTKWPWLVYI
Ga0310892_103231491	3300031858	Soil	MANVFTDWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVHII
Ga0310900_108424573	3300031908	Soil	VFADWTSRAVIAARIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVYII
Ga0310901_101934771	3300031940	Soil	MANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPA
Ga0310906_107553632	3300032013	Soil	PMANVFTDWTSRTAIAARIAEERQVESWNELAAPDDYDLSFDKIEYQIRPAKWPWLVYII
Ga0310890_101327281	3300032075	Soil	MANVFADWTSRAVIAGRIAEERRNPVESWNELAAPEDYDLSHKIEYQIRPAKWPWLVYII
Ga0310890_103568762	3300032075	Soil	MANVFTDWTSRAVIAARIAEERWNPVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYV
Ga0307470_107986811	3300032174	Hardwood Forest Soil	MANVFADWTSRAAIASRIAEEQRNPVESWNELEAPEDYDLPFEKIEYQIRPAKWPWLVHI
Ga0310889_100010229	3300032179	Soil	DVPMANVFTDRTSRTAIAARIAEERQVESWNELAAPEDYDLSLDKIEYQIRPAKWPWLVYII
Ga0307471_1033109871	3300032180	Hardwood Forest Soil	MLVNTFWTSRVAIAARIAEERRCPESWNELTAPEGYDLPLDKVEYQIRPTRWPWQVYIIENGARIC
Ga0307471_1037955431	3300032180	Hardwood Forest Soil	MAVRHMNSKRLEALMANVFTNWSSRAAIASRIAEEQRNPVESWNELEAPEDYDLSFDKVEYQLRPAKWPWLVYII
Ga0310812_102764651	3300032421	Soil	MANVFVDWTSRAAIDARIAEEQRHPVESWNELIVPEDYDLSLDKIEYQIKPAKWPWLVHI
Ga0335084_124263051	3300033004	Soil	ANAFMDWTSRVAIDARIAEEQRHPVESWNELVVPEDYDLSLDKIEYQIKPAKWPWLVHII
Ga0316628_1001653762	3300033513	Soil	MANVFMDWTSRVAIAARIEEERRHPVESWNELTVPEDYDLPLEKVEYHIRPAKWPWLVYI
Ga0326723_0393441_202_381	3300034090	Peat Soil	MSNMFIDSESRVAIAKRVAERRRAESWNEVTIPDGYDRPLDKAEYQTRAAKWLWHLYII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters