Metagenome / Metatranscriptome Family F033510

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F033510
Family Type	Metagenome / Metatranscriptome
Number of Sequences	177
Average Sequence Length	75 residues
Representative Sequence	MPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG
Number of Associated Samples	144
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.19 %
% of genes near scaffold ends (potentially truncated)	32.20 %
% of genes from short scaffolds (< 2000 bps)	80.23 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (55.367 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (7.345 % of family members)
Environment Ontology (ENVO)	Unclassified (46.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 45.63% Coil/Unstructured: 54.37%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF01161	PBP	13.56
PF01135	PCMT	10.17
PF00571	CBS	5.65
PF03707	MHYT	3.95
PF04381	RdgC	2.82
PF01564	Spermine_synth	2.26
PF03466	LysR_substrate	2.26
PF04055	Radical_SAM	1.13
PF08543	Phos_pyr_kin	1.13
PF00582	Usp	1.13
PF00144	Beta-lactamase	0.56
PF02581	TMP-TENI	0.56
PF00753	Lactamase_B	0.56
PF07883	Cupin_2	0.56
PF00881	Nitroreductase	0.56
PF02146	SIR2	0.56
PF07311	Dodecin	0.56
PF01875	Memo	0.56
PF13378	MR_MLE_C	0.56
PF00015	MCPsignal	0.56
PF14241	Obsolete Pfam Family	0.56
PF01425	Amidase	0.56
PF04235	DUF418	0.56
PF01323	DSBA	0.56
PF05088	Bac_GDH	0.56
PF03473	MOSC	0.56
PF02560	Cyanate_lyase	0.56
PF13759	2OG-FeII_Oxy_5	0.56
PF00578	AhpC-TSA	0.56
PF01042	Ribonuc_L-PSP	0.56
PF00856	SET	0.56
PF12680	SnoaL_2	0.56
PF01734	Patatin	0.56
PF13426	PAS_9	0.56
PF13432	TPR_16	0.56
PF00456	Transketolase_N	0.56
PF00912	Transgly	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	13.56
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	10.17
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	10.17
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	10.17
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	10.17
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	3.95
COG3300	MHYT domain, NO-binding membrane sensor	Signal transduction mechanisms [T]	3.95
COG2974	DNA recombination-dependent growth factor RdgC	Replication, recombination and repair [L]	2.82
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	1.13
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	1.13
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	1.13
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.13
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	1.13
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.56
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	0.56
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.56
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.56
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.56
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.56
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.56
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.56
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.56
COG2311	Uncharacterized membrane protein YeiB	Function unknown [S]	0.56
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.56
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.56
COG1513	Cyanate lyase	Inorganic ion transport and metabolism [P]	0.56
COG1355	Predicted class III extradiol dioxygenase, MEMO1 family	General function prediction only [R]	0.56
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.56
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.56
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.37 %
Unclassified	root	N/A	44.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.37 %
Unclassified	root	N/A	44.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.37 %
Unclassified	root	N/A	44.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.50 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	34.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	25.99 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	7.34 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.39 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.26 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.13 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.56 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.39 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.13 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	1.69 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.56 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.56 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.56 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.56 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.56 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.39 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.13 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.56 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	0.56 %
unclassified Polaromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas	0.56 %
unclassified Rhizobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter	0.56 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.56 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.56 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.39 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.13 %
Rhizobacter sp. Root1221	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root1221	0.56 %
Polaromonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.	0.56 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.56 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	0.56 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	0.56 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.56 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.39 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.13 %
Burkholderia pseudomallei S13	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei S13	0.56 %
Rhizobacter sp. Root1221	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root1221	0.56 %
Polaromonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.	0.56 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.56 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	0.56 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.56 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102668426	Not Available	659	Open in IMG/M
3300001213\|JGIcombinedJ13530_100770666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	769	Open in IMG/M
3300001431\|F14TB_102114370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	620	Open in IMG/M
3300002128\|JGI24036J26619_10061195	Not Available	741	Open in IMG/M
3300003215\|JGI25153J46596_10019081	All Organisms → cellular organisms → Bacteria → Proteobacteria	2637	Open in IMG/M
3300004156\|Ga0062589_101804757	Not Available	614	Open in IMG/M
3300004463\|Ga0063356_103270085	Not Available	698	Open in IMG/M
3300004463\|Ga0063356_105213741	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300004479\|Ga0062595_101318923	Not Available	651	Open in IMG/M
3300004480\|Ga0062592_100370939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1123	Open in IMG/M
3300005093\|Ga0062594_101784640	Not Available	647	Open in IMG/M
3300005328\|Ga0070676_10031202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3044	Open in IMG/M
3300005330\|Ga0070690_100016631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4410	Open in IMG/M
3300005338\|Ga0068868_100076860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2670	Open in IMG/M
3300005338\|Ga0068868_100513854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1051	Open in IMG/M
3300005338\|Ga0068868_100630271	Not Available	953	Open in IMG/M
3300005344\|Ga0070661_100448115	Not Available	1027	Open in IMG/M
3300005356\|Ga0070674_100025779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3831	Open in IMG/M
3300005356\|Ga0070674_100041956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3105	Open in IMG/M
3300005365\|Ga0070688_101581603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	535	Open in IMG/M
3300005366\|Ga0070659_100076481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp.	2669	Open in IMG/M
3300005367\|Ga0070667_101406835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	654	Open in IMG/M
3300005367\|Ga0070667_101492211	Not Available	635	Open in IMG/M
3300005440\|Ga0070705_100804241	Not Available	748	Open in IMG/M
3300005445\|Ga0070708_100074333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	3065	Open in IMG/M
3300005456\|Ga0070678_100215371	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300005456\|Ga0070678_100308803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1347	Open in IMG/M
3300005459\|Ga0068867_100704309	Not Available	891	Open in IMG/M
3300005459\|Ga0068867_101127586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	717	Open in IMG/M
3300005467\|Ga0070706_100000271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	63046	Open in IMG/M
3300005526\|Ga0073909_10040960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1639	Open in IMG/M
3300005535\|Ga0070684_100177499	Not Available	1936	Open in IMG/M
3300005539\|Ga0068853_100380429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1318	Open in IMG/M
3300005563\|Ga0068855_101499848	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300005577\|Ga0068857_100682760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	975	Open in IMG/M
3300005577\|Ga0068857_101125303	Not Available	759	Open in IMG/M
3300005578\|Ga0068854_100023848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4182	Open in IMG/M
3300005616\|Ga0068852_100086123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2800	Open in IMG/M
3300005618\|Ga0068864_100980096	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005719\|Ga0068861_102140546	Not Available	560	Open in IMG/M
3300005840\|Ga0068870_10817026	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005844\|Ga0068862_100005314	All Organisms → cellular organisms → Bacteria → Proteobacteria	10787	Open in IMG/M
3300005844\|Ga0068862_101881250	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300006038\|Ga0075365_10779041	Not Available	675	Open in IMG/M
3300006048\|Ga0075363_100646375	Not Available	636	Open in IMG/M
3300006051\|Ga0075364_10123973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1731	Open in IMG/M
3300006057\|Ga0075026_100275936	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300006177\|Ga0075362_10683929	Not Available	534	Open in IMG/M
3300006178\|Ga0075367_10103278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1744	Open in IMG/M
3300006195\|Ga0075366_10026450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3399	Open in IMG/M
3300006195\|Ga0075366_10268673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1041	Open in IMG/M
3300006195\|Ga0075366_10485809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	763	Open in IMG/M
3300006195\|Ga0075366_11074005	Not Available	503	Open in IMG/M
3300006237\|Ga0097621_101583119	Not Available	623	Open in IMG/M
3300006353\|Ga0075370_10000838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	12436	Open in IMG/M
3300006354\|Ga0075021_10604864	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006953\|Ga0074063_13962134	Not Available	583	Open in IMG/M
3300009094\|Ga0111539_12048443	Not Available	664	Open in IMG/M
3300009098\|Ga0105245_12034001	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300009148\|Ga0105243_12319608	Not Available	574	Open in IMG/M
3300009156\|Ga0111538_10246555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2262	Open in IMG/M
3300009162\|Ga0075423_11215100	Not Available	804	Open in IMG/M
3300009177\|Ga0105248_10159180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	2548	Open in IMG/M
3300009177\|Ga0105248_10799832	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300009545\|Ga0105237_11524325	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300009551\|Ga0105238_12190396	Not Available	587	Open in IMG/M
3300009553\|Ga0105249_10356331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1483	Open in IMG/M
3300009678\|Ga0105252_10270112	Not Available	750	Open in IMG/M
3300010366\|Ga0126379_12051425	Not Available	674	Open in IMG/M
3300010398\|Ga0126383_11852000	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300011106\|Ga0151489_1024766	Not Available	623	Open in IMG/M
3300011435\|Ga0137426_1116789	Not Available	764	Open in IMG/M
3300012513\|Ga0157326_1059529	Not Available	580	Open in IMG/M
3300012517\|Ga0157354_1045761	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300012904\|Ga0157282_10300261	Not Available	565	Open in IMG/M
3300012944\|Ga0137410_10712504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	837	Open in IMG/M
3300012960\|Ga0164301_10989754	Not Available	660	Open in IMG/M
3300014325\|Ga0163163_12189933	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300014879\|Ga0180062_1141810	Not Available	552	Open in IMG/M
3300014880\|Ga0180082_1066371	Not Available	783	Open in IMG/M
3300015371\|Ga0132258_11244913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root1221	1881	Open in IMG/M
3300015371\|Ga0132258_11790836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1548	Open in IMG/M
3300015374\|Ga0132255_104128272	Not Available	616	Open in IMG/M
3300016341\|Ga0182035_11174968	Not Available	685	Open in IMG/M
3300016357\|Ga0182032_11742779	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300018083\|Ga0184628_10537353	Not Available	599	Open in IMG/M
3300018429\|Ga0190272_11237389	Not Available	737	Open in IMG/M
3300018476\|Ga0190274_10023464	All Organisms → cellular organisms → Bacteria → Proteobacteria	4096	Open in IMG/M
3300018476\|Ga0190274_10834830	Not Available	982	Open in IMG/M
3300018481\|Ga0190271_10127258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2411	Open in IMG/M
3300018481\|Ga0190271_10192344	Not Available	2022	Open in IMG/M
3300018481\|Ga0190271_10428845	Not Available	1422	Open in IMG/M
3300020034\|Ga0193753_10031461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2998	Open in IMG/M
3300021082\|Ga0210380_10039465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2029	Open in IMG/M
3300021082\|Ga0210380_10584165	Not Available	512	Open in IMG/M
3300024288\|Ga0179589_10259123	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300025245\|Ga0207425_1043322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	849	Open in IMG/M
3300025258\|Ga0209129_1032868	Not Available	856	Open in IMG/M
3300025315\|Ga0207697_10017192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	2973	Open in IMG/M
3300025893\|Ga0207682_10015217	Not Available	2994	Open in IMG/M
3300025893\|Ga0207682_10160932	Not Available	1017	Open in IMG/M
3300025901\|Ga0207688_10342348	Not Available	920	Open in IMG/M
3300025903\|Ga0207680_10105855	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300025903\|Ga0207680_11168825	Not Available	549	Open in IMG/M
3300025910\|Ga0207684_10160562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1935	Open in IMG/M
3300025913\|Ga0207695_10054662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4167	Open in IMG/M
3300025918\|Ga0207662_10105513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1751	Open in IMG/M
3300025919\|Ga0207657_11339189	Not Available	540	Open in IMG/M
3300025920\|Ga0207649_10087605	All Organisms → cellular organisms → Bacteria → Proteobacteria	2032	Open in IMG/M
3300025924\|Ga0207694_10366554	All Organisms → cellular organisms → Bacteria → Nitrospirae	1194	Open in IMG/M
3300025925\|Ga0207650_10323110	Not Available	1264	Open in IMG/M
3300025925\|Ga0207650_11819307	Not Available	515	Open in IMG/M
3300025925\|Ga0207650_11916596	Not Available	500	Open in IMG/M
3300025927\|Ga0207687_10766759	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300025930\|Ga0207701_10015731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	7322	Open in IMG/M
3300025933\|Ga0207706_10016853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6594	Open in IMG/M
3300025934\|Ga0207686_10307893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1179	Open in IMG/M
3300025937\|Ga0207669_10028685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3065	Open in IMG/M
3300025937\|Ga0207669_11649542	Not Available	547	Open in IMG/M
3300025940\|Ga0207691_11301105	Not Available	600	Open in IMG/M
3300025941\|Ga0207711_10376520	Not Available	1317	Open in IMG/M
3300025942\|Ga0207689_10108736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2278	Open in IMG/M
3300025942\|Ga0207689_11778588	Not Available	509	Open in IMG/M
3300025961\|Ga0207712_10389516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1168	Open in IMG/M
3300026023\|Ga0207677_10140830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1846	Open in IMG/M
3300026023\|Ga0207677_10642327	Not Available	936	Open in IMG/M
3300026041\|Ga0207639_11434712	Not Available	648	Open in IMG/M
3300026067\|Ga0207678_11967465	Not Available	509	Open in IMG/M
3300026095\|Ga0207676_10060263	Not Available	3001	Open in IMG/M
3300026116\|Ga0207674_10594819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1069	Open in IMG/M
3300026116\|Ga0207674_11160013	Not Available	742	Open in IMG/M
3300026121\|Ga0207683_10734967	Not Available	915	Open in IMG/M
3300026142\|Ga0207698_10064377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2873	Open in IMG/M
3300026142\|Ga0207698_10328314	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300027821\|Ga0209811_10334247	Not Available	585	Open in IMG/M
3300027840\|Ga0209683_10217218	Not Available	879	Open in IMG/M
3300028380\|Ga0268265_11213522	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300028381\|Ga0268264_10042277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	3772	Open in IMG/M
3300028786\|Ga0307517_10000327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	82422	Open in IMG/M
3300028786\|Ga0307517_10179339	All Organisms → cellular organisms → Bacteria → Proteobacteria	1371	Open in IMG/M
3300028786\|Ga0307517_10184267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei S13	1340	Open in IMG/M
3300028786\|Ga0307517_10609079	Not Available	537	Open in IMG/M
3300029984\|Ga0311332_10295786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1239	Open in IMG/M
3300031170\|Ga0307498_10267439	Not Available	627	Open in IMG/M
3300031231\|Ga0170824_105434560	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031366\|Ga0307506_10040679	Not Available	1302	Open in IMG/M
3300031446\|Ga0170820_16069648	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300031456\|Ga0307513_10341882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1247	Open in IMG/M
3300031456\|Ga0307513_10383891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1143	Open in IMG/M
3300031456\|Ga0307513_10502760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	929	Open in IMG/M
3300031469\|Ga0170819_12618440	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031474\|Ga0170818_100164632	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031616\|Ga0307508_10140213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2021	Open in IMG/M
3300031616\|Ga0307508_10756432	Not Available	585	Open in IMG/M
3300031668\|Ga0318542_10552737	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300031680\|Ga0318574_10463202	Not Available	742	Open in IMG/M
3300031716\|Ga0310813_11358260	Not Available	658	Open in IMG/M
3300031720\|Ga0307469_11152815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	731	Open in IMG/M
3300031730\|Ga0307516_10042122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4532	Open in IMG/M
3300031740\|Ga0307468_100743911	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300031793\|Ga0318548_10404570	Not Available	669	Open in IMG/M
3300031798\|Ga0318523_10466577	Not Available	626	Open in IMG/M
3300031896\|Ga0318551_10911603	Not Available	513	Open in IMG/M
3300031912\|Ga0306921_10340730	All Organisms → cellular organisms → Bacteria → Proteobacteria	1754	Open in IMG/M
3300031938\|Ga0308175_101529123	Not Available	746	Open in IMG/M
3300031947\|Ga0310909_11307398	Not Available	583	Open in IMG/M
3300031954\|Ga0306926_12063327	Not Available	639	Open in IMG/M
3300032004\|Ga0307414_10403189	Not Available	1188	Open in IMG/M
3300032009\|Ga0318563_10586770	Not Available	601	Open in IMG/M
3300032013\|Ga0310906_11218110	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300032041\|Ga0318549_10383044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	634	Open in IMG/M
3300032043\|Ga0318556_10309446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	826	Open in IMG/M
3300032060\|Ga0318505_10219304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	893	Open in IMG/M
3300032157\|Ga0315912_11433149	Not Available	545	Open in IMG/M
3300033289\|Ga0310914_11461245	Not Available	587	Open in IMG/M
3300033550\|Ga0247829_10387661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1147	Open in IMG/M
3300034147\|Ga0364925_0340545	Not Available	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.63%
Environmental	Environmental	42.37%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.63%
Terrestrial	Environmental → Terrestrial	36.16%
Aquatic	Environmental → Aquatic	6.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.47%
Roots	Host-Associated → Plants → Roots	12.43%
Sediment	Environmental → Aquatic → Sediment	3.95%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Marine	Environmental → Aquatic → Marine	0.56%
Peat	Environmental → Terrestrial → Peat	0.56%
Floodplain	Environmental → Terrestrial → Floodplain	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.60%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	5.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	5.65%
Loam	Environmental → Terrestrial → Soil → Loam	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.69%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.13%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.60%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	5.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.13%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.56%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.65%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	5.65%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	5.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.13%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.13%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.13%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.56%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.56%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.56%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.56%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300003215	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025245	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes)	Host-Associated	Open in IMG/M
3300025258	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1026684262	3300000955	Soil	MPNRVTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG*
JGIcombinedJ13530_1007706662	3300001213	Wetland	MPNRLTHEQVTALDAQGERHVVLVTRSSIPGSPHLKGPPHYTWHEGKVLHLVDAKSGILECALSGQRLRIE
F14TB_1021143702	3300001431	Soil	MPARPTHXXXXXFDDKGERHVVMVTRWAIPGSPHVKGPPHYTWHEGQALHLVDPKAGVLECVATKQRLKIEAWRG*
JGI24036J26619_100611951	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MPNRITHEQLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECXVTGQRLKIEAWRG*
JGI25153J46596_100190813	3300003215	Arabidopsis Rhizosphere	MSVRITHEQLAAHDDKGERHVVMVTRAPVPSAPHLRGMPHYTWHDGQVLHLVDAKAGVLECAVTGQRLTIERWRG*
Ga0062589_1018047571	3300004156	Soil	MPTRITHEQLAAHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG*
Ga0063356_1032700852	3300004463	Arabidopsis Thaliana Rhizosphere	QRESKVLGRYTHEQIAALDDQGERHVVMVTRIPVPGSPHLHGPPHYTWHDGQHLHLVDAKAGVLECALTGQRLKIVDWHG*
Ga0063356_1052137412	3300004463	Arabidopsis Thaliana Rhizosphere	MSKRPTHEQLAAHDDQGELHVVKVTRSPIPGAPHLHGPPHYTWHDGQVLHLVDDKAGILECIRSKQR
Ga0062595_1013189232	3300004479	Soil	MPGRFTHRFSHEQIAAHDDKGERHVVMVTRLPIPGSPHLHGPPHYTWHDGQALHLVDAKAGVIECALTGQRLTIENWRV*
Ga0062592_1003709392	3300004480	Soil	MPNRITHEQLAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG*
Ga0062594_1017846401	3300005093	Soil	MPTRITHEQLAAHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG*
Ga0070676_100312024	3300005328	Miscanthus Rhizosphere	MPNRITHEQLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG*
Ga0070690_1000166314	3300005330	Switchgrass Rhizosphere	MPNRITHEQLVARNDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG*
Ga0068868_1000768601	3300005338	Miscanthus Rhizosphere	VPNRYSHEQIAAYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAATGRRLKIADWHG*
Ga0068868_1005138542	3300005338	Miscanthus Rhizosphere	MPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG*
Ga0068868_1006302711	3300005338	Miscanthus Rhizosphere	FDQTVAPGAHQWNDEMPNRITHEQLVARNDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG*
Ga0070661_1004481153	3300005344	Corn Rhizosphere	MPNRITHQQLAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECIVTGQRLKIEAWRG*
Ga0070674_1000257792	3300005356	Miscanthus Rhizosphere	MPNRITHEQLVARNDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG*
Ga0070674_1000419565	3300005356	Miscanthus Rhizosphere	MPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGSPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWCG*
Ga0070688_1015816031	3300005365	Switchgrass Rhizosphere	VPNRLTHEQIVAHDDQGERHVVMVTRVAIPGSHLRSPPHYTWNDGQTLHLVDAKAGVLECALTGRRLKIADWHG*
Ga0070659_1000764813	3300005366	Corn Rhizosphere	THEQLAAHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG*
Ga0070667_1014068351	3300005367	Switchgrass Rhizosphere	VPNRYSHEQIAAYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAVTGRRLKIADWHG*
Ga0070667_1014922112	3300005367	Switchgrass Rhizosphere	MPNRYTREQIVAVDDKGERHVVMVTRVPVPGSSHLRGPPHYTWNDGHTLHLVDAKAGVLECAVTGQRLKIEDWRG*
Ga0070705_1008042411	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LDDKGERHVVMVTRSPIPGSPHVIGPPHYTWHDGQTLHLVDAKAGILECALTGQRLKIEAWRG*
Ga0070708_1000743333	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRYTHEQLTAVDHLGERHSIMVTRSSIPGSPHLHGPPHYTWNGGQTLHLVDPKAGILECALTRQRLKIEGWRG*
Ga0070678_1002153712	3300005456	Miscanthus Rhizosphere	VPGRVTHEQIAAYDDKGERHVIMVTRLPIPGSPHLHGPPHYTWHDGQVLHLVDAQAGIIECAVTGQRLKIEDWRR*
Ga0070678_1003088032	3300005456	Miscanthus Rhizosphere	MPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG*
Ga0068867_1007043091	3300005459	Miscanthus Rhizosphere	MPNRITHEQLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG*
Ga0068867_1011275861	3300005459	Miscanthus Rhizosphere	GRRSRTRLESDMASRHTHEQIAARDDKGERHIVMVRRSPIPGSPHLHGPPHYTWNDGQVLHLVDAKAGIIECALTGQRLKIEDWRG*
Ga0070706_10000027112	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRYTHEQLTAVDHLGERHSIMVTRSSIPGSPHLHGPPHYTWNGGQTLHLVDPKAGILECALTGQRLKIEGWRG*
Ga0073909_100409602	3300005526	Surface Soil	MPNRMTHEQLAAHDDKGERYVVMVTRTPIPGSPHLKGPPRYTWRDGQALHLIDAKAGILECVVTGQRLKIEAWRG*
Ga0070684_1001774993	3300005535	Corn Rhizosphere	MPNRLTHEQLAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECIVTGQRLKIEAWRG*
Ga0068853_1003804293	3300005539	Corn Rhizosphere	VPNRYSHEQIAAYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAATARRLKIADWHG*
Ga0068855_1014998482	3300005563	Corn Rhizosphere	VTGRFTREQIAAYDDQGGRHVVMVTRSPVPGSSHLRGPPHYTWNDGQTLHLVDAQAGVLECALTGQRLKIADWHG*
Ga0068857_1006827602	3300005577	Corn Rhizosphere	MIERHRESDVPNRLTHEQIVAYDDQGERHVVMVTRVAIPGSHLRSPPHYTWNDGQTLHLVDAKAGVLECALTGRRLKIADWHG*
Ga0068857_1011253032	3300005577	Corn Rhizosphere	MPNRITHEQLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG*
Ga0068854_1000238482	3300005578	Corn Rhizosphere	VTGRFTREQIVAYDDQGGRHVVMVTRSPVPGSSHLRGPPHYTWNDGQTLHLVDAQAGVLECALTGQRLKIADWHG*
Ga0068852_1000861234	3300005616	Corn Rhizosphere	VPNRYSHEQIAAHDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAVTGRRLKIADWHG*
Ga0068864_1009800962	3300005618	Switchgrass Rhizosphere	MPGRFTHRFSHEQIAAHDDKGERHVVMVTRLPIPGSPHLHGPPHYTWHDGQALHLVDAKAGVIECALTGQRLKIENWRV*
Ga0068861_1021405461	3300005719	Switchgrass Rhizosphere	GHRFPSSAPGAHQGNDDMPTRITHEQLAAHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG*
Ga0068870_108170262	3300005840	Miscanthus Rhizosphere	VPGRVTHEQIAAYDDKGERHVIMVTRLPIPGSPHLHGPPHYTWHDGQVLHLVDAQAGIIECAV
Ga0068862_10000531413	3300005844	Switchgrass Rhizosphere	MPNRITHEQLVARNDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG*
Ga0068862_1018812502	3300005844	Switchgrass Rhizosphere	VLGRYTHEQIAALDDQGERHVVMVTRIPVPGSPHLHGPPHYTWHDGQHLHLVDAKAGVLECALTGQRLKIVDWHG*
Ga0075365_107790412	3300006038	Populus Endosphere	AYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAVTGRRLKIADWHG*
Ga0075363_1006463752	3300006048	Populus Endosphere	DQRESKVLGRYTHEQIAALDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAATGRRLKIADWHG*
Ga0075364_101239732	3300006051	Populus Endosphere	VPNRYSHEQIAAHDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAATARRLKIADWHG*
Ga0075026_1002759361	3300006057	Watersheds	MPNRFTHEQIAARDEKGERHIVMVTRSPVPGSSHLRGPPHYTWNDGHSLHLVDAKVGILECTVTRQRLNIEDWRG*
Ga0075362_106839292	3300006177	Populus Endosphere	MTNRISHEQLAARDAAGERHVVMVTRAPIPGSPHLKGPPHYTWHDGQALHLIDAKVGVLECALTKRRLTIDAWRG*
Ga0075367_101032781	3300006178	Populus Endosphere	AYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAATGRRLKIADWHG*
Ga0075366_100264505	3300006195	Populus Endosphere	VTGRFTRDQIAAYDDQGERHVVMVTRSPVPGSSHLRGPPHYTWHDGQTLHLVDAKAGVLECALTGQRLKIADWHG*
Ga0075366_102686733	3300006195	Populus Endosphere	VLGRYTHEQIAALDDQGERHVVMVTRIPVPGSPHLHGPPHYTWHDGQLLHLVDAKAGVLECALTGQRLKIVDWHG*
Ga0075366_104858092	3300006195	Populus Endosphere	MSARITHEQLAAHDDKGERHVVMVTRAPVPSAPHLRGMPHYTWHDGQVLHLVDAKAGVLECAVTGQRLAIESWRG*
Ga0075366_110740051	3300006195	Populus Endosphere	MIGRDPESDVPNRLTHEQIVALDDQGERHVVMVTRVAIPGSHLRSPPHYTWNDGQVLHLIDAKAGILQCAVTGARLKIADWHG*
Ga0097621_1015831191	3300006237	Miscanthus Rhizosphere	NDDMPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG*
Ga0075370_100008385	3300006353	Populus Endosphere	VSNRLSHDQIVAHDDQGERHVVMVTRVAIPGSPHLRGPPHYTWNDGQTLHLVDAKAGILECAQTGKRLKIADWHG*
Ga0075021_106048641	3300006354	Watersheds	MPNRFTHEQIAARDEKGERHIVMVTRSPVPGASHLRGPPHYTWNDGHSLHLVDAKVGILECMVTRQRLNIEDWRG*
Ga0074063_139621342	3300006953	Soil	MPNRITHEQLAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWR
Ga0111539_120484432	3300009094	Populus Rhizosphere	MPARITHEQLAAHDDKGERHVVMVTRSPIPGSLHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG*
Ga0105245_120340011	3300009098	Miscanthus Rhizosphere	VTGRFTREQIAAYDDQGGRHVVMVTRSPVPGSSHLRGPPHYTWNDGQTLHLVDAQAGVLECALTGQRLKIEDWR
Ga0105243_123196081	3300009148	Miscanthus Rhizosphere	HEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLIDPKAGILECVVSGQRLKIEAWRG*
Ga0111538_102465553	3300009156	Populus Rhizosphere	MPNRITHEQLAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG*
Ga0075423_112151002	3300009162	Populus Rhizosphere	VHNRYSRYTHEQIAVHDDQGERHVVMVTRSPIPGSPHLRGPPHYTWNDGQPLHLVDAKAGVLECALTGKRLKIADWHG*
Ga0105248_101591801	3300009177	Switchgrass Rhizosphere	DDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG*
Ga0105248_107998322	3300009177	Switchgrass Rhizosphere	MPNRITHEQLVAHDDKGERQVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG*
Ga0105237_115243251	3300009545	Corn Rhizosphere	MPGRFTHRFSHEQIAAHDDKGERYVVMVTRLPIPGSPHLHGPPHYTWHDGQALHLVDAKAGVIECALTGQRLTIENWRV*
Ga0105238_121903961	3300009551	Corn Rhizosphere	GFRCEWRCQRNDDMPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLIDPKAGILECVVSGQRLKIEAWRG*
Ga0105249_103563313	3300009553	Switchgrass Rhizosphere	MIGRCRSHARLRESEVPSRVTHEQIAAYDDQGERHVIMVTRVAIPGSPHLRGPPHYTWNEGQPLHLVDAKAGILECALTGRRLKIADWHG*
Ga0105252_102701122	3300009678	Soil	MPNRIIHEQLAAHDDKGERHVVMVTRSPIPGSPHLKGSPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG*
Ga0126379_120514251	3300010366	Tropical Forest Soil	MSNRRTHEQVAAYDDKGERHVVMVTRSPIPGSAHLQGPPRYSWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG*
Ga0126383_118520001	3300010398	Tropical Forest Soil	MPNRLTHEQLTAYDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRDGQALHLVDPKAGILECVITRQRLKIGGWRG*
Ga0151489_10247661	3300011106	Soil	MPNRITHEQIAAHDDKGERYVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLIDAKAGILECVVTGQRLKIEAWRG*
Ga0137426_11167891	3300011435	Soil	MLESDMPNRYTHEQIAAHDDNGERHVVMVTRSPIPGSPHLHGPPHYTWNDGQTLHLVDDQAVVLECVRTRQRLKIEDWRG*
Ga0157326_10595292	3300012513	Arabidopsis Rhizosphere	VPNRYSHEQIAAYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECVVSRQRLKIEAWRG*
Ga0157354_10457611	3300012517	Unplanted Soil	MSIRPTHEQIAAHDDKGERHIVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPQAGILECVVTGQ
Ga0157282_103002612	3300012904	Soil	EWRCQRNDDMPNRITHEQIAAHDDKGERHVIMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG*
Ga0137410_107125041	3300012944	Vadose Zone Soil	MSSRSVHEQIAAHDDKGERHVVMVRRSTIPGSPHLRGMPHYTWHDGQTLHLIDAKAGIIECVLTGQRLKIEEWHG*
Ga0164301_109897542	3300012960	Soil	MPNRITHEQLAAHDDKGERYVVMVTRTPIPGSPHLKGPPRYTWRDGQALHLIDAKAGILECVVTGQRLKIEAWRG*
Ga0163163_121899331	3300014325	Switchgrass Rhizosphere	NMPGRYTHEQIAARDDQGERHIIMVRRAPIPGSPHLHGSPHYTWNDGQVLHLVDAKAGIIECALTGKRLKIEDWRG*
Ga0180062_11418101	3300014879	Soil	LESDMPNRYTHEQIAAHDDNGERHVVMVTRSPIPGSPHLQGPPHYTWNDGQTLHLIDDKAGILECVRTRQRLKIEEWGG*
Ga0180082_10663711	3300014880	Soil	MAVRDDKGERHVVMVTRSPIPGSPHLQGPPHYTWNDGQTLHLIDDKAGILECVRTRQRLMIEDWRG*
Ga0132258_112449132	3300015371	Arabidopsis Rhizosphere	MPNRYTREQIVAVDDKGERHVVMVTRVPVPGSHLRGPPHYTWNDGQTLHLVDAKAGVLECAVTGQRLKIADWRG*
Ga0132258_117908362	3300015371	Arabidopsis Rhizosphere	MSNRTTHEQLVAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRVGHALHLVDPKAGILECVVTGQRLRIEAWRG*
Ga0132255_1041282721	3300015374	Arabidopsis Rhizosphere	MPNRITHEQLVARNDKGERHVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLIDPKAGILECVVSRQRLKIEAWRG*
Ga0182035_111749682	3300016341	Soil	MPNRLTHEQLTAYDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRNGQALHLVDPKAGILECVITRQRLKIGGWRG
Ga0182032_117427792	3300016357	Soil	MPNRLTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRNGQALHLVDPKAGILECVI
Ga0184628_105373531	3300018083	Groundwater Sediment	MPIRYTHEQIVAHDDKGVGHVVMVTRSPIPGSPHLQGPPHYTWNDGQTLHLIDDKAGILECVRTRQRLKIEDWRG
Ga0190272_112373892	3300018429	Soil	MSNRYSHEQIAAHDDKGERHVVMVTRSPIPGSPHLHGPPHYTWHDGQTLRLIDGKAGILECVRTRQRLKIEDWRG
Ga0190274_100234646	3300018476	Soil	MPNRPTHEQIAARDDTGERHVVMVTRSPIPGSPHLKGPPHYTWRDGNVLHLVDPKAGILECAVTGQRLRIEAWRG
Ga0190274_108348302	3300018476	Soil	MPRRITHEQLTAHDDKGERHVIMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG
Ga0190271_101272583	3300018481	Soil	MLANAQRLQRSHSESDMSNRYTHGQITVHDDKGEPHVVMVTRSPIPGSPHLQGPPHYTWNDGQTLHLIDDKAGILECVRTRQRLKIEDWRG
Ga0190271_101923442	3300018481	Soil	MPIRYTHEQMAVRDDKGERHVVMVTRSPIPGSPHLQGPPHYTWNDGQTLHLIDDKAGILECVRTRQRLMIEDWRG
Ga0190271_104288452	3300018481	Soil	MLANARRLVRIPESDMPNRYTHEQIAAHNDKGERHVVMVTRSPVPGSPHLQGPPHHTWHDGQTLRLIDDKAGILECVRTRQRLKIENCRG
Ga0193753_100314611	3300020034	Soil	MQATPVREQIAAHDDKGERHVIMVTRTSVPGSPHLRGPPHYKWHDGQTLHLVDAKAGILECALTKQRLKIENWRG
Ga0210380_100394651	3300021082	Groundwater Sediment	MPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG
Ga0210380_105841651	3300021082	Groundwater Sediment	RDDKGQRHVVRVTRSPIPGSPHLQGPPHYTWNDGQTLHLIDDKAGILECVRTRQRLKIEDWRG
Ga0179589_102591232	3300024288	Vadose Zone Soil	MLLGWQGEREIDIQAPPVREQIAALDDKGERHVIMVTRTSVPGSPHLRGPPHYKWHDGQTLHLVDAKAGILECALTKQRLKIENWRG
Ga0207425_10433222	3300025245	Arabidopsis Rhizosphere	MSVRITHEQLAAHDDKGERHVVMVTRAPVPSAPHLRGMPHYTWHDGQVLHLVDAKAGVLECAVTGQRLTIERWRG
Ga0209129_10328681	3300025258	Arabidopsis Rhizosphere	HEQLAAHDDKGERHVVMVTRAPVPSAPHLRGMPHYTWHDGQVLHLVDAKAGVLECAVTGQRLTIERWRG
Ga0207697_100171921	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	PNRITHEQLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG
Ga0207682_100152173	3300025893	Miscanthus Rhizosphere	MPNRITHEQLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG
Ga0207682_101609321	3300025893	Miscanthus Rhizosphere	MPTRITHEQLAAHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG
Ga0207688_103423481	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPNRITHEQLAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG
Ga0207680_101058553	3300025903	Switchgrass Rhizosphere	SHEQLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG
Ga0207680_111688251	3300025903	Switchgrass Rhizosphere	VTGRFTREQIVAYDDQGGRHVVMVTRSPVPGSSHLRGPPHYTWNDGQTLHLVDAQAGVLECALTGQ
Ga0207684_101605622	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRYTHEQLTAVDHLGERHSIMVTRSSIPGSPHLHGPPHYTWNGGQTLHLVDPKAGILECALTGQRLKIEGWRG
Ga0207695_100546624	3300025913	Corn Rhizosphere	VPNRYSHEQIAAYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAATARRLKIADWHG
Ga0207662_101055132	3300025918	Switchgrass Rhizosphere	MPNRITHEQLVARNDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG
Ga0207657_113391892	3300025919	Corn Rhizosphere	MPNRSSHEQLVACDDKGEQHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG
Ga0207649_100876052	3300025920	Corn Rhizosphere	MPNRLTHEQLAAHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECIVTGQRLKIEAWRG
Ga0207694_103665541	3300025924	Corn Rhizosphere	MPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLIDPKAGILECVVSGQRLKIEAWRG
Ga0207650_103231101	3300025925	Switchgrass Rhizosphere	HDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG
Ga0207650_118193072	3300025925	Switchgrass Rhizosphere	ACSALGAQDWESDMPGRFTHRFSHEQIAAHDDKGERHVVMVTRLPIPGSPHLHGPPHYTWHDGQALHLVDAKAGVIECALTGQRLTIENWRV
Ga0207650_119165962	3300025925	Switchgrass Rhizosphere	MPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECV
Ga0207687_107667592	3300025927	Miscanthus Rhizosphere	MPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLIDPKAGILECVVSRQRLKIEAWRG
Ga0207701_100157313	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPNRITHEQLVARNDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG
Ga0207706_100168533	3300025933	Corn Rhizosphere	VPNRYSHEQIAAYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAATGRRLKIADWHG
Ga0207686_103078932	3300025934	Miscanthus Rhizosphere	VTGRFTREQIVAYDDQGGRHVVMVTRSPVPGSSHLRGPPHYTWNDGQTLHLVDAQAGVLECALTGQRLKIADWHG
Ga0207669_100286853	3300025937	Miscanthus Rhizosphere	MPNRITHEQLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG
Ga0207669_116495421	3300025937	Miscanthus Rhizosphere	GGVFRCEWRCQRNDDMPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGSPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWCG
Ga0207691_113011052	3300025940	Miscanthus Rhizosphere	VPNRYSHEQIAAYDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAVTGRRLKIADWHG
Ga0207711_103765203	3300025941	Switchgrass Rhizosphere	NRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG
Ga0207689_101087364	3300025942	Miscanthus Rhizosphere	MPTRITHEQLAAHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWR
Ga0207689_117785881	3300025942	Miscanthus Rhizosphere	IAAHDDKGERHVVMVTRLPIPGSPHLHGPPHYTWHDGQALHLVDAKAGVIECALTGQRLTIENWRV
Ga0207712_103895162	3300025961	Switchgrass Rhizosphere	MIGRCRSHARLRESEVPSRVTHEQIAAYDDQGERHVIMVTRVAIPGSPHLRGPPHYTWNEGQPLHLVDAKAGILECALTGRRLKIADWHG
Ga0207677_101408301	3300026023	Miscanthus Rhizosphere	FTHRFSHEQIAAHDDKGERHVVMVTRLPIPGSPHLHGPPHYTWHDGQALHLVDAKAGVIECALTGQRLTIENWRV
Ga0207677_106423272	3300026023	Miscanthus Rhizosphere	DMPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG
Ga0207639_114347121	3300026041	Corn Rhizosphere	AHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG
Ga0207678_119674652	3300026067	Corn Rhizosphere	EWRCQRNDDMPNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLIDPKAGILECVVSGQRLKIEAWRG
Ga0207676_100602632	3300026095	Switchgrass Rhizosphere	MSNRITHEQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG
Ga0207674_105948192	3300026116	Corn Rhizosphere	MIERHRESDVPNRLTHEQIVAYDDQGERHVVMVTRVAIPGSHLRSPPHYTWNDGQTLHLVDAKAGVLECALTGRRLKIADWHG
Ga0207674_111600131	3300026116	Corn Rhizosphere	YTHEQIAALDDQGERHVVMVTRIPVPGSPHLHGPPHYTWHDGQHLHLVDAKAGVLECELTGQRLKIVDWHG
Ga0207683_107349671	3300026121	Miscanthus Rhizosphere	ITHEQLVARNDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG
Ga0207698_100643774	3300026142	Corn Rhizosphere	VPNRYSHEQIAAHDDQGERHVVMVTRVAIPGSHLRGPPHYTWNNGQTLHLVDPKAGILECAVTGRRLKIADWHG
Ga0207698_103283143	3300026142	Corn Rhizosphere	AAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPKAGILECVVTGQRLKIEAWRG
Ga0209811_103342472	3300027821	Surface Soil	MPNRMTHEQLAAHDDKGERYVVMVTRTPIPGSPHLKGPPRYTWRDGQALHLIDAKAGILECVVTGQRLKIEAWRG
Ga0209683_102172181	3300027840	Wetland Sediment	MPNKYTHEQIAAHDDKGERHVVMVTRGPIPGSPHLHGPPHYTWNGGQALHLVDAKAGVIECVLTGRRLKIEDWRG
Ga0268265_112135222	3300028380	Switchgrass Rhizosphere	VLGRYTHEQIAALDDQGERHVVMVTRIPVPGSPHLHGPPHYTWHDGQHLHLVDAKAGVLECALTGQRLKIVDWHG
Ga0268264_100422771	3300028381	Switchgrass Rhizosphere	QLVAHDDKGARHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECAVTGQRLKIEAWRG
Ga0307517_1000032751	3300028786	Ectomycorrhiza	MPGRYTHEQIAARDDKGERHIVMVRRSPIPGSPHLHGPPHYTWNDGQVLHLVDAKAGIIECALTGQRLKIEDWRG
Ga0307517_101793393	3300028786	Ectomycorrhiza	MPNRTTHEQIAAHDDKGERHIVMVRRSPIPGSPHLRGPPHYTWHDGQVLHLVDAKAGIIECALTGQRLKIEDWRG
Ga0307517_101842672	3300028786	Ectomycorrhiza	VSNRLSHDQVVAHDDLGERHVVRVTRVAIPGSPHLRGPPHYTWNDGQTLHLVDAKAGVLECALTGRRLKIADWHG
Ga0307517_106090792	3300028786	Ectomycorrhiza	MIGRHRESDVPNRLSHEQIVAHDDQGERHVVMVTRVAIPGSHLRSPPHYTWNDGQTLHLVDAKAGVLECALTGRRLKIADWHG
Ga0311332_102957864	3300029984	Fen	MPHRITHEQMAAHDDKGERHAIKVTRSPVPGSPHLHGPPHYTWHEGQTLHLVDAKAGILECSLTHQRLKIEDWRG
Ga0307498_102674392	3300031170	Soil	MSIRLTHEQIAAHDDKGERHIVMVTRSPIPGSPHLKGPPHYTWRDGQALHLVDPQAGILECVVTGQRLKIEAWRG
Ga0170824_1054345602	3300031231	Forest Soil	MSIRFTHEQIAARDDKGERHTVMVTRSPIPGSSHLRGPPHCTWNDGHSLHLVDAKAGILECSLTGQRLKIEDWR
Ga0307506_100406793	3300031366	Soil	MPNRITHEQLAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRE
Ga0170820_160696482	3300031446	Forest Soil	MSIRFTHEQIAARDDKGERHTVMVTRSPIPGSSHLRGPPHYTWNDGHSRHLVYAKAGILECSLTGQRLKIEDWRG
Ga0307513_103418821	3300031456	Ectomycorrhiza	MPGRFTHEQIAAHDDKGERHVVMVTRSPIPGSPRLHGPPHYTWHDGQTLHLIDAKAGIIECVLTGQRLKIEDWHG
Ga0307513_103838913	3300031456	Ectomycorrhiza	MQGIPVREQIAAHDDKGERHVIMVTRTPIPGSPHLHGPPHYKWHDGQTLHLVDAKAGILECALTKQRLKIENWRG
Ga0307513_105027602	3300031456	Ectomycorrhiza	LPLEEREIDMQGIPVHEQIAAHDDKGERHVIMVTRTPIPGSPHLHGPPHYKWHDGQALHLVDATAGILECALTKQRLKIENWRG
Ga0170819_126184402	3300031469	Forest Soil	MSIRFTHEQIAARDDKGERHTVMVTRSPIPGSSHLRGPPHYTWNDGHSLHLVDAKAGILECSLTLK
Ga0170818_1001646322	3300031474	Forest Soil	MSIRFTHEQIAARDDKGERHTVMVTRSPIPGSSHLRGPPHYTWNDGHSLHLVDAKAGILECSLTGQRLKIEDWR
Ga0307508_101402132	3300031616	Ectomycorrhiza	VPNRLSHDQIVAHDDLGERHVVRVTRVAIPGSPHLRGPPHYTWNDGQTLHLVDAKAGILECALTGRRLKIADWHG
Ga0307508_107564321	3300031616	Ectomycorrhiza	EVPNRYAHEQIAAHDDQGERHVVMVTRVAVPGSHLRGPPHYTWNNGQTLHLVDAKAGILECATSGRRLRIADWHG
Ga0318542_105527371	3300031668	Soil	MPNRLTHEQLTAHDDKGEQHVVRVTRSPIPGSPHLRGPPHYSWRDGQALHLIDPKAGILECVITRQRLKIGGWRG
Ga0318574_104632022	3300031680	Soil	MPNRLTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRNGQALHLVDPKAGILECVITRQRLKIGGWRG
Ga0310813_113582602	3300031716	Soil	QGNDDMPTRITHEQLAAHDDKGGRHVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDAKAGILECVITGQRLKIEAWRG
Ga0307469_111528152	3300031720	Hardwood Forest Soil	IDAHQRNGDMPNRITREQIAAHDDKGERHVVMVTRSPIPGSPHLKGPPHYTWRDGKALHLVDPKAGILECVVTGQRLKIEAWRG
Ga0307516_100421224	3300031730	Ectomycorrhiza	VTGRFTREQIAAYDDQGERHVVMVTRSPVPGSSHLRGPPHYTWNDGQTLHLVDAKAGVLQCAVTGRRLKIAEWHG
Ga0307468_1007439112	3300031740	Hardwood Forest Soil	MTNRLSHEQIAAHDDKGERHVVMVTRAPIPGSHLKGPPHYTWHNGQALHLIDPKAGILECGLTKQRLKIEAWRG
Ga0318548_104045701	3300031793	Soil	LTRSNGNDDMPNRLTHEQLTAHDDKGEQHVVRVTRSPIPGSPHLRGPPHYSWRDGQALHLVDPKAGILECVITRQRSKIGGWRG
Ga0318523_104665771	3300031798	Soil	MPNRLTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRDGQALHLVDPKAGILECVITRQRLKIGGWRG
Ga0318551_109116031	3300031896	Soil	NRLTHEQLTAYDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRNGQALHLVDPKAGILECVITRQRLKIGGWRG
Ga0306921_103407303	3300031912	Soil	MPNRLTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRDGQALHLIDPKAGILECVITRQRLKIGGWRG
Ga0308175_1015291232	3300031938	Soil	VRPSGPGWAPGAQQRNDDMPNRLTHEQLSAHDHKGEQHVVMVTRSPIPGSPHLKGPPRYTWRDGQALHLVDPKAGILECVITGERLKIEAWRG
Ga0310909_113073981	3300031947	Soil	MPNRLTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRDGQALHLIDPKAGILECVITRQ
Ga0306926_120633272	3300031954	Soil	MSNRLTHEQVAAYDDKGERHVVMVTRSPIPGSAHLHGPPRYTWRDGQVLHLIDPKAGILECAVTGQRLKIEAWRG
Ga0307414_104031892	3300032004	Rhizosphere	MSNRITHQQLAAHDAAGERHVVMVTRASLPGSPHLKGPPHYSWHAGQALHLIDATAGILECALTRERLTIEAWRA
Ga0318563_105867701	3300032009	Soil	NRLTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRDGQALHLVDPKAGILECVITRQRLKIGGWRG
Ga0310906_112181102	3300032013	Soil	MPNRITHEQLATHDDKGERQVVMVTRSPIPGSPHLKGPPHYTWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG
Ga0318549_103830442	3300032041	Soil	LTRSNGNDDMPNRLTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRDGQALHLIDPKAGILECVITRQRLKIGGWRG
Ga0318556_103094461	3300032043	Soil	MPNRLTHEQLTAYDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRDGQALHLVDPKAGILECVITRQRLKIGGWRG
Ga0318505_102193041	3300032060	Soil	MPNRLTHEQLTAYDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRNGQALHLVDPKAGILECVITRQ
Ga0315912_114331492	3300032157	Soil	MLANAQRLQRSHSESDMSNRYTHGQITVHDDKGEPHVVMVTRSPIPGSPHLQGPPHYTWNDGQTLHLIDDKAGILECVRTGQRLKIEDWRG
Ga0310914_114612452	3300033289	Soil	LTRSNGNDDMPNRLTHEQLTAHDDKGEQHVVMVTRSPIPGSPHLRGPPHYSWRNGQALHLVDPKAGILECVITRQRLKIGGWRG
Ga0247829_103876613	3300033550	Soil	MTNRITHEQLAVHDDKGERHVVMVTRSPIPGAAHLKGPPHYSWRDGQALHLIDPKAGILECVVTGQRLKIEAWRG
Ga0364925_0340545_251_478	3300034147	Sediment	MPIRYTHEQIAARDDKGQRHVVRVTRSPIPGSPHLQGPPHYTWNDGQTLHLIDDKAGILECVRTRQRLKIEDWRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033510

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences