Metagenome / Metatranscriptome Family F032448

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F032448
Family Type	Metagenome / Metatranscriptome
Number of Sequences	180
Average Sequence Length	48 residues
Representative Sequence	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEIFTDQKQLA
Number of Associated Samples	141
Number of Associated Scaffolds	180

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.56 %
% of genes near scaffold ends (potentially truncated)	39.44 %
% of genes from short scaffolds (< 2000 bps)	83.89 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (15.556 % of family members)
Environment Ontology (ENVO)	Unclassified (72.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.41% β-sheet: 0.00% Coil/Unstructured: 70.59%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 180 Family Scaffolds
PF02784	Orn_Arg_deC_N	57.22
PF02424	ApbE	31.67
PF02955	GSH-S_ATP	2.22
PF00293	NUDIX	1.67
PF02401	LYTB	1.11
PF04055	Radical_SAM	1.11
PF08886	GshA	0.56
PF07456	Hpre_diP_synt_I	0.56
PF13365	Trypsin_2	0.56
PF05746	DALR_1	0.56
PF08245	Mur_ligase_M	0.56

COG ID	Name	Functional Category	% Frequency in 180 Family Scaffolds
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	57.22
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	57.22
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	31.67
COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	Translation, ribosomal structure and biogenesis [J]	4.44
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	2.22
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.56
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.56
COG4769	Uncharacterized membrane protein	Function unknown [S]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.44 %
Unclassified	root	N/A	40.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.67 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	46.67 %
Unclassified	root	N/A	40.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	38.33 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
unclassified Nitrosomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales	21.67 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	1.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.67 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
OM43 clade	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	17.22 %
Methylophilales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	4.44 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	1.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.67 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Methylophilales bacterium HTCC2181	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	17.22 %
Methylophilales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	4.44 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	1.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.67 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2006543006\|2006867278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1539	Open in IMG/M
3300000115\|DelMOSum2011_c10005706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	7196	Open in IMG/M
3300000115\|DelMOSum2011_c10052497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1597	Open in IMG/M
3300000116\|DelMOSpr2010_c10042722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	2033	Open in IMG/M
3300000116\|DelMOSpr2010_c10105066	Not Available	1054	Open in IMG/M
3300000137\|LP_F_10_SI03_10DRAFT_c1041435	Not Available	641	Open in IMG/M
3300000213\|LP_F_10_SI03_150DRAFT_c1040948	Not Available	605	Open in IMG/M
3300001346\|JGI20151J14362_10095455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1043	Open in IMG/M
3300001346\|JGI20151J14362_10155955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	677	Open in IMG/M
3300001348\|JGI20154J14316_10018491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	3963	Open in IMG/M
3300001348\|JGI20154J14316_10032196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	2564	Open in IMG/M
3300001348\|JGI20154J14316_10055077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1633	Open in IMG/M
3300001348\|JGI20154J14316_10084417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1092	Open in IMG/M
3300001348\|JGI20154J14316_10116706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	801	Open in IMG/M
3300001348\|JGI20154J14316_10124676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	752	Open in IMG/M
3300001348\|JGI20154J14316_10158274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	602	Open in IMG/M
3300001351\|JGI20153J14318_10082243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	967	Open in IMG/M
3300001352\|JGI20157J14317_10078365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1304	Open in IMG/M
3300003478\|JGI26238J51125_1000215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	21626	Open in IMG/M
3300003478\|JGI26238J51125_1030262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1210	Open in IMG/M
3300003494\|JGI26240J51127_1000178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	29099	Open in IMG/M
3300003495\|JGI26244J51143_1000091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	47611	Open in IMG/M
3300003501\|JGI26243J51142_1024844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1350	Open in IMG/M
3300003583\|JGI26253J51717_1039120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	938	Open in IMG/M
3300003601\|JGI26382J51730_1003559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	5612	Open in IMG/M
3300003620\|JGI26273J51734_10111658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	748	Open in IMG/M
3300004279\|Ga0066605_10057352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1733	Open in IMG/M
3300004279\|Ga0066605_10146502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	941	Open in IMG/M
3300004279\|Ga0066605_10229213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	702	Open in IMG/M
3300004279\|Ga0066605_10268366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	634	Open in IMG/M
3300004280\|Ga0066606_10049362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1680	Open in IMG/M
3300004280\|Ga0066606_10094780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	1132	Open in IMG/M
3300005233\|Ga0066627_1337710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	557	Open in IMG/M
3300005239\|Ga0073579_1167007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	27722	Open in IMG/M
3300005838\|Ga0008649_10205832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	763	Open in IMG/M
3300006164\|Ga0075441_10000760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	16148	Open in IMG/M
3300006399\|Ga0075495_1443119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1213	Open in IMG/M
3300007229\|Ga0075468_10028513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	2006	Open in IMG/M
3300007552\|Ga0102818_1108625	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300007554\|Ga0102820_1019977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1653	Open in IMG/M
3300007620\|Ga0102871_1193067	Not Available	568	Open in IMG/M
3300007637\|Ga0102906_1214359	Not Available	517	Open in IMG/M
3300007647\|Ga0102855_1067890	Not Available	962	Open in IMG/M
3300007692\|Ga0102823_1115700	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300007992\|Ga0105748_10076150	Not Available	1321	Open in IMG/M
3300008052\|Ga0102893_1189340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	596	Open in IMG/M
3300008956\|Ga0104261_1019222	Not Available	812	Open in IMG/M
3300008961\|Ga0102887_1058684	Not Available	1256	Open in IMG/M
3300008964\|Ga0102889_1085846	Not Available	939	Open in IMG/M
3300008993\|Ga0104258_1074352	Not Available	634	Open in IMG/M
3300009003\|Ga0102813_1032674	Not Available	1851	Open in IMG/M
3300009050\|Ga0102909_1048159	Not Available	1068	Open in IMG/M
3300009076\|Ga0115550_1201906	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300009077\|Ga0115552_1328600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	608	Open in IMG/M
3300009079\|Ga0102814_10271496	Not Available	923	Open in IMG/M
3300009079\|Ga0102814_10288859	Not Available	892	Open in IMG/M
3300009086\|Ga0102812_10145753	Not Available	1296	Open in IMG/M
3300009193\|Ga0115551_1372728	Not Available	616	Open in IMG/M
3300009423\|Ga0115548_1065940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1243	Open in IMG/M
3300009434\|Ga0115562_1200714	Not Available	714	Open in IMG/M
3300009435\|Ga0115546_1220462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	653	Open in IMG/M
3300009436\|Ga0115008_10573259	Not Available	811	Open in IMG/M
3300009440\|Ga0115561_1075216	Not Available	1438	Open in IMG/M
3300009440\|Ga0115561_1136855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	972	Open in IMG/M
3300009440\|Ga0115561_1203703	Not Available	752	Open in IMG/M
3300009442\|Ga0115563_1257580	Not Available	648	Open in IMG/M
3300009442\|Ga0115563_1375806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	506	Open in IMG/M
3300009443\|Ga0115557_1042713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	2085	Open in IMG/M
3300009445\|Ga0115553_1416037	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300009449\|Ga0115558_1203449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	815	Open in IMG/M
3300009449\|Ga0115558_1226385	Not Available	762	Open in IMG/M
3300009472\|Ga0115554_1264652	Not Available	685	Open in IMG/M
3300009495\|Ga0115571_1132699	Not Available	1055	Open in IMG/M
3300009495\|Ga0115571_1251185	Not Available	711	Open in IMG/M
3300009496\|Ga0115570_10266897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	750	Open in IMG/M
3300009498\|Ga0115568_10188842	Not Available	957	Open in IMG/M
3300009706\|Ga0115002_10793494	Not Available	662	Open in IMG/M
3300012415\|Ga0138263_1765783	Not Available	535	Open in IMG/M
3300012524\|Ga0129331_1214318	Not Available	1465	Open in IMG/M
3300012969\|Ga0129332_1370422	Not Available	659	Open in IMG/M
3300012969\|Ga0129332_1514982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	2401	Open in IMG/M
3300017724\|Ga0181388_1118940	Not Available	629	Open in IMG/M
3300017735\|Ga0181431_1039792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1071	Open in IMG/M
3300017749\|Ga0181392_1039655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1463	Open in IMG/M
3300017781\|Ga0181423_1122911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1009	Open in IMG/M
3300020165\|Ga0206125_10018209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	4339	Open in IMG/M
3300020165\|Ga0206125_10042980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	2281	Open in IMG/M
3300020165\|Ga0206125_10087719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1352	Open in IMG/M
3300020165\|Ga0206125_10209097	Not Available	757	Open in IMG/M
3300020166\|Ga0206128_1061123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1776	Open in IMG/M
3300020166\|Ga0206128_1299045	Not Available	573	Open in IMG/M
3300020169\|Ga0206127_1030228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	3133	Open in IMG/M
3300020169\|Ga0206127_1203057	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300020175\|Ga0206124_10302721	Not Available	609	Open in IMG/M
3300020182\|Ga0206129_10294044	Not Available	657	Open in IMG/M
3300020185\|Ga0206131_10129836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1366	Open in IMG/M
3300020185\|Ga0206131_10197509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	992	Open in IMG/M
3300020185\|Ga0206131_10307475	Not Available	705	Open in IMG/M
3300020187\|Ga0206130_10258375	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300020187\|Ga0206130_10295619	Not Available	702	Open in IMG/M
3300020317\|Ga0211688_1006173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	2971	Open in IMG/M
3300020388\|Ga0211678_10191945	Not Available	860	Open in IMG/M
3300020438\|Ga0211576_10665280	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300020452\|Ga0211545_10045957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	2123	Open in IMG/M
3300020595\|Ga0206126_10198403	Not Available	935	Open in IMG/M
3300021347\|Ga0213862_10089351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1086	Open in IMG/M
3300021365\|Ga0206123_10461785	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300021371\|Ga0213863_10033127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	2829	Open in IMG/M
3300021378\|Ga0213861_10356462	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300021957\|Ga0222717_10290938	Not Available	935	Open in IMG/M
3300021957\|Ga0222717_10479298	Not Available	673	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1007699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	6879	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10314594	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10504281	Not Available	506	Open in IMG/M
3300023568\|Ga0228696_1031251	Not Available	612	Open in IMG/M
3300023685\|Ga0228686_1041765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	630	Open in IMG/M
3300023694\|Ga0228683_1025430	Not Available	643	Open in IMG/M
3300023699\|Ga0228695_1023690	Not Available	863	Open in IMG/M
3300023702\|Ga0232119_1029301	Not Available	851	Open in IMG/M
3300023704\|Ga0228684_1052399	Not Available	634	Open in IMG/M
(restricted) 3300024252\|Ga0233435_1000492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	46446	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10016927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	4657	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10346168	Not Available	556	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10375346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
(restricted) 3300024256\|Ga0233446_1111210	Not Available	798	Open in IMG/M
(restricted) 3300024257\|Ga0233442_1174751	Not Available	553	Open in IMG/M
(restricted) 3300024258\|Ga0233440_1094068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	968	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10338842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	637	Open in IMG/M
3300024267\|Ga0228623_1064018	Not Available	699	Open in IMG/M
(restricted) 3300024302\|Ga0233449_1075992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1218	Open in IMG/M
(restricted) 3300024339\|Ga0233445_1001919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	14726	Open in IMG/M
3300025468\|Ga0209685_1067778	Not Available	690	Open in IMG/M
3300025584\|Ga0209774_1006701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	4047	Open in IMG/M
3300025602\|Ga0209361_1129106	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025626\|Ga0209716_1108225	Not Available	779	Open in IMG/M
3300025637\|Ga0209197_1067735	Not Available	1147	Open in IMG/M
3300025660\|Ga0209045_1008432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	4810	Open in IMG/M
3300025665\|Ga0209360_1048895	Not Available	1424	Open in IMG/M
3300025688\|Ga0209140_1135898	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300025694\|Ga0209406_1082080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1125	Open in IMG/M
3300025704\|Ga0209602_1240194	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300025707\|Ga0209667_1024543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	2600	Open in IMG/M
3300025767\|Ga0209137_1261477	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300025806\|Ga0208545_1020381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	2256	Open in IMG/M
3300025809\|Ga0209199_1080803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1418	Open in IMG/M
3300025809\|Ga0209199_1098854	Not Available	1210	Open in IMG/M
3300025809\|Ga0209199_1157253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	841	Open in IMG/M
3300025869\|Ga0209308_10399911	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300025874\|Ga0209533_1074137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1817	Open in IMG/M
3300025874\|Ga0209533_1326764	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300025876\|Ga0209223_10224294	Not Available	901	Open in IMG/M
3300025886\|Ga0209632_10152337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1272	Open in IMG/M
3300025886\|Ga0209632_10424411	Not Available	627	Open in IMG/M
3300025892\|Ga0209630_10242459	Not Available	851	Open in IMG/M
3300025894\|Ga0209335_10406334	Not Available	546	Open in IMG/M
3300026426\|Ga0247570_1072931	Not Available	684	Open in IMG/M
3300026458\|Ga0247578_1061011	Not Available	726	Open in IMG/M
3300026460\|Ga0247604_1043022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1090	Open in IMG/M
3300026479\|Ga0228622_1105105	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300026500\|Ga0247592_1026158	Not Available	1412	Open in IMG/M
3300026504\|Ga0247587_1025201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1409	Open in IMG/M
3300026506\|Ga0228604_1066239	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300026517\|Ga0228607_1022455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1594	Open in IMG/M
3300027501\|Ga0208948_1046158	Not Available	904	Open in IMG/M
3300027506\|Ga0208973_1074102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	816	Open in IMG/M
3300027522\|Ga0209384_1001192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	14196	Open in IMG/M
3300027751\|Ga0208304_10309798	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300027757\|Ga0208671_10052435	Not Available	1515	Open in IMG/M
3300027833\|Ga0209092_10273986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	921	Open in IMG/M
3300027833\|Ga0209092_10554881	Not Available	580	Open in IMG/M
3300027833\|Ga0209092_10596721	Not Available	552	Open in IMG/M
3300028109\|Ga0247582_1096234	Not Available	773	Open in IMG/M
3300028111\|Ga0233397_1161771	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300028188\|Ga0257124_1004320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	6904	Open in IMG/M
3300028274\|Ga0257119_1096528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	714	Open in IMG/M
3300028274\|Ga0257119_1138058	Not Available	557	Open in IMG/M
3300028287\|Ga0257126_1092797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1105	Open in IMG/M
3300028414\|Ga0228627_1050040	Not Available	1125	Open in IMG/M
3300031519\|Ga0307488_10221369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1267	Open in IMG/M
3300031773\|Ga0315332_10526722	Not Available	742	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	25.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	20.00%
Coastal	Environmental → Aquatic → Marine → Coastal	16.11%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	12.22%
Inlet	Environmental → Aquatic → Marine → Inlet	9.44%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.89%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.11%
Strait	Environmental → Aquatic → Marine → Strait	2.22%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	25.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.11%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	12.22%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	9.44%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.89%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.22%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.11%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	15.56%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	11.67%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	10.56%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	10.00%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	9.44%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.89%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	7.22%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	7.22%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.33%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.33%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	2.22%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.22%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.22%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.11%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.11%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	1.11%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.56%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.56%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.56%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.56%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2006543006	Marine microbial communities from anoxic basin of Saanich Inlet - SI040908_100	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000137	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample F_10_SI03_10	Environmental	Open in IMG/M
3300000213	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_150	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300003494	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_150m_DNA	Environmental	Open in IMG/M
3300003495	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA	Environmental	Open in IMG/M
3300003501	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_130m_DNA	Environmental	Open in IMG/M
3300003583	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA	Environmental	Open in IMG/M
3300003601	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300004280	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m	Environmental	Open in IMG/M
3300005233	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI054_135m_RNA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005838	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNA	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006399	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007552	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007637	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008956	Marine microbial communities from eastern North Pacific Ocean - P8 free-living McLane	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300008993	Marine microbial communities from eastern North Pacific Ocean - P1 free-living	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009050	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300012415	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA15.ICE_1m.20151115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012969	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020317	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555998-ERR599027)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022888 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_120_MG	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023568	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 84R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023685	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023694	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 31R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023699	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 81R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023702	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 82R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023704	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 35R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024252 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_135_MG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024256 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_120_MG	Environmental	Open in IMG/M
3300024257 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_150_MG	Environmental	Open in IMG/M
3300024258 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_120_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024267	Seawater microbial communities from Monterey Bay, California, United States - 28D	Environmental	Open in IMG/M
3300024302 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_200_MG	Environmental	Open in IMG/M
3300024339 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_100_MG	Environmental	Open in IMG/M
3300025468	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_120m (SPAdes)	Environmental	Open in IMG/M
3300025584	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_150m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025602	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_200m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025660	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025665	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025688	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025707	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026426	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 23R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026458	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 36R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026460	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 85R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026479	Seawater microbial communities from Monterey Bay, California, United States - 26D	Environmental	Open in IMG/M
3300026500	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026504	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 46R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026506	Seawater microbial communities from Monterey Bay, California, United States - 4D	Environmental	Open in IMG/M
3300026517	Seawater microbial communities from Monterey Bay, California, United States - 8D	Environmental	Open in IMG/M
3300027501	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_17_M020 (SPAdes)	Environmental	Open in IMG/M
3300027506	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027751	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)	Environmental	Open in IMG/M
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028109	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 41R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028111	Seawater microbial communities from Monterey Bay, California, United States - 35D	Environmental	Open in IMG/M
3300028188	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_150	Environmental	Open in IMG/M
3300028274	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_200m	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300028414	Seawater microbial communities from Monterey Bay, California, United States - 33D	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2007009887	2006543006	Marine	MYMKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA
DelMOSum2011_100057065	3300000115	Marine	MKKYSFLICFYFLLVVGCGTKGELYIPEEKYPQSQLNKYKDEIXTDQKQLA*
DelMOSum2011_100524971	3300000115	Marine	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQFYKYKDEIFIDQKQLA*
DelMOSpr2010_100427222	3300000116	Marine	MKKYSFLICFYFLLVVGCGTKGELYIPEEKYPQSQLNKYKDEILTDQKQLA*
DelMOSpr2010_101050661	3300000116	Marine	FLLVVGCGTKGELYIPEEKYPQSQLNKYKDEILTDQKQLA*
LP_F_10_SI03_10DRAFT_10414352	3300000137	Marine	FLICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA*
LP_F_10_SI03_150DRAFT_10409482	3300000213	Marine	ILFLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA*
JGI20151J14362_100954552	3300001346	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGGLYIPEQKYPQSQLNKYKDEIFTDQKQLA*
JGI20151J14362_101559552	3300001346	Pelagic Marine	MKKYCFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDQIFADQKKLA*
JGI20154J14316_100184913	3300001348	Pelagic Marine	MKKYYFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYNDEITXQKQLA*
JGI20154J14316_100321963	3300001348	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGGLYIPEQKYPQSHLNKYKNEIFTDQKQIA*
JGI20154J14316_100550771	3300001348	Pelagic Marine	MYMKKYSFLICFYFLLLVGCGTKGALYIPEEKYPQSQLYKYKDEITDQKQLA*
JGI20154J14316_100844172	3300001348	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQXA*
JGI20154J14316_101167062	3300001348	Pelagic Marine	MKKYSFLICFYFLILVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLS*
JGI20154J14316_101246762	3300001348	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLA*
JGI20154J14316_101582742	3300001348	Pelagic Marine	MKKYSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDE
JGI20153J14318_100822431	3300001351	Pelagic Marine	LVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLA*
JGI20157J14317_100783652	3300001352	Pelagic Marine	MKKYSFLICFYFLILVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA*
JGI26238J51125_10002155	3300003478	Marine	MKKNNFLIYFYILFLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA*
JGI26238J51125_10302621	3300003478	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA*
JGI26240J51127_10001783	3300003494	Marine	MKKNNFLIYFYILXLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA*
JGI26244J51143_100009146	3300003495	Marine	MKKNNFLIYFYILLLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA*
JGI26243J51142_10248442	3300003501	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLXKYKDEIFTDQKQLA*
JGI26253J51717_10391202	3300003583	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
JGI26382J51730_10035597	3300003601	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEILLIKNS*
JGI26273J51734_101116582	3300003620	Marine	MKKYSFLIYFYFLLLIGCGTKGALYIPEEKYPQSQLNQYKDEIFTDQKQLS*
Ga0066605_100573522	3300004279	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA*
Ga0066605_101465021	3300004279	Marine	MKKYSFLIYFYFLLLIGCGTKGALYIPEEKYPQSQLNQYKDEIFTDQKQL
Ga0066605_102292132	3300004279	Marine	MKKYSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA*
Ga0066605_102683661	3300004279	Marine	MKKYYFFICFYFLILVGCGTKGELYIPEEKYPQSQFYKYKDEIFIDQKQLA*
Ga0066606_100493621	3300004280	Marine	MKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA*
Ga0066606_100947801	3300004280	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQL
Ga0066627_13377101	3300005233	Marine	LIYFYILFLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA*
Ga0073579_11670078	3300005239	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEIFSDQKQLA*
Ga0008649_102058321	3300005838	Marine	MKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA*
Ga0075441_1000076010	3300006164	Marine	MKNNNILICLYIFFLCGCGTKGGLYIPEEKYPQSQLDKYKNEIFIEHKLLA*
Ga0075495_14431192	3300006399	Aqueous	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQLNKYNDEITYQKQLA*
Ga0075468_100285133	3300007229	Aqueous	MKKYYFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYNDEITYQKQLA*
Ga0102818_11086251	3300007552	Estuarine	KYYFLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLG*
Ga0102820_10199772	3300007554	Estuarine	MKKYSFLICLYFLLLVGCGTKGELYIPDEKYPQSQLNQYKDEITDQKQLA*
Ga0102871_11930672	3300007620	Estuarine	FLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0102906_12143592	3300007637	Estuarine	MKKNYFLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA*
Ga0102855_10678901	3300007647	Estuarine	MKKYSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEIFTDQKQLA*
Ga0102823_11157002	3300007692	Estuarine	MKKYSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0105748_100761502	3300007992	Estuary Water	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLG*
Ga0102893_11893402	3300008052	Estuarine	MKKYSFLIYFYFLLLIGCGTKGTLYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0104261_10192221	3300008956	Ocean Water	LVLVGCGTKGALYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0102887_10586841	3300008961	Estuarine	RMKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0102889_10858461	3300008964	Estuarine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA*
Ga0104258_10743522	3300008993	Ocean Water	FYFLILVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA*
Ga0102813_10326743	3300009003	Estuarine	MKKYYFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA*
Ga0102909_10481592	3300009050	Estuarine	YFLILVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0115550_12019062	3300009076	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGGLYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0115552_13286002	3300009077	Pelagic Marine	MKKYSFLICFYFLLLLGCGTKGELYIPEEKYPQSQLNKYKDEIFSDQKQLA*
Ga0102814_102714961	3300009079	Estuarine	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEIFIDQKKLA*
Ga0102814_102888592	3300009079	Estuarine	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0102812_101457531	3300009086	Estuarine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQAQLNKYKDEITDQKQLA*
Ga0115551_13727281	3300009193	Pelagic Marine	FYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0115548_10659402	3300009423	Pelagic Marine	MKKYSFLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLA*
Ga0115562_12007142	3300009434	Pelagic Marine	MKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0115546_12204622	3300009435	Pelagic Marine	MKKNSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA*
Ga0115008_105732592	3300009436	Marine	NSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLG*
Ga0115561_10752162	3300009440	Pelagic Marine	LLLVGCGTKGGLYIPEQKYPQSQLNKYKDEIFTDQKQLA*
Ga0115561_11368552	3300009440	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQK
Ga0115561_12037031	3300009440	Pelagic Marine	MKKYSLLIYFYFLLLVGCGTKGALYIPEEKYPQSQLNQYKDEIFTDQKQLA*
Ga0115563_12575802	3300009442	Pelagic Marine	MKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQ
Ga0115563_13758062	3300009442	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGALYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0115557_10427132	3300009443	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDENTDQKQLA*
Ga0115553_14160372	3300009445	Pelagic Marine	FLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLA*
Ga0115558_12034492	3300009449	Pelagic Marine	MKKYSFLICFYFLILVGCGTKGELYIPEEKYPQSQLYKYKDEITDQK
Ga0115558_12263852	3300009449	Pelagic Marine	SFLICFYFLILVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA*
Ga0115554_12646521	3300009472	Pelagic Marine	MKKYYFFICFYFLILVGCGTKGELYIPEQKYPQSQLNKYKDGIFIDQKQLA*
Ga0115571_11326992	3300009495	Pelagic Marine	SFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0115571_12511851	3300009495	Pelagic Marine	KYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA*
Ga0115570_102668972	3300009496	Pelagic Marine	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA*
Ga0115568_101888422	3300009498	Pelagic Marine	MKKNSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLA*
Ga0115002_107934941	3300009706	Marine	ILLLIGCGTKGGLYIPEEKYPQSKIDKYQNKIINDQTQSA*
Ga0138263_17657832	3300012415	Polar Marine	LILIGCGTKGELYIPEEKYPQSKIDKYQYKIINDQTQSG*
Ga0129331_12143182	3300012524	Aqueous	MKKYSFLICFYFLLVVGCGTKGELYIPEEKYPQSQLNKYKDEIFTDQKQLA*
Ga0129332_13704221	3300012969	Aqueous	MKKYYFLICFYFLLLVGCGTKGELYIPEEKYPQSQFYKYKDEIFIDQKQLA*
Ga0129332_15149823	3300012969	Aqueous	MKKYSFLICFYFLLVVGCGTKGELYIPEEKYPQSQLNKYKDEIFSDQKQLA*
Ga0181388_11189401	3300017724	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEIFTDQKQLA
Ga0181431_10397922	3300017735	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEFFTDQKQLA
Ga0181392_10396552	3300017749	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQNQLA
Ga0181423_11229112	3300017781	Seawater	MKKYSFLIYFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0206125_100182095	3300020165	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0206125_100429803	3300020165	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0206125_100877192	3300020165	Seawater	MKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA
Ga0206125_102090972	3300020165	Seawater	LLVGCGTKGGLYIPEQKYPQSQLNKYKDEIFTDQKQLA
Ga0206128_10611231	3300020166	Seawater	LICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEIFTDQKQLA
Ga0206128_12990452	3300020166	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLA
Ga0206127_10302283	3300020169	Seawater	MKKYSFLICFYFLLLVGCGTKGGLYIPEQKYPQSQLNKYKDEIFTDQKQLA
Ga0206127_12030572	3300020169	Seawater	MKKYYFFICFYFLILVGCGTKGELYIPEEKYPQSQFYKYKDEIFIDQKQLA
Ga0206124_103027211	3300020175	Seawater	VGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0206129_102940441	3300020182	Seawater	MYMKKYSFLICFYFLLLVGCGTKGALYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0206131_101298361	3300020185	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDE
Ga0206131_101975092	3300020185	Seawater	MKKYSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0206131_103074752	3300020185	Seawater	RMKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0206130_102583752	3300020187	Seawater	MKKYYFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEIFTDQKQLA
Ga0206130_102956192	3300020187	Seawater	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEFFTDQKQLA
Ga0211688_10061733	3300020317	Marine	MKKYYFLICFYFLLLFGCGTKGELYIPEERYPQSQLNKYEDEIFTDQKQLA
Ga0211678_101919451	3300020388	Marine	LICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0211576_106652802	3300020438	Marine	TRMKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0211545_100459573	3300020452	Marine	MKNNNILICLYIFFLCGCGTKGALYIPEEKYPQSHLDKYENEIFIEHKLIA
Ga0206126_101984031	3300020595	Seawater	KRMKKYSFFICFYFLILVGCGTKGELYIPEEKYPQSQFYKYKDEIFIDQKQLA
Ga0213862_100893512	3300021347	Seawater	MKKYSFLICFYFLLLVGCGTKGGLYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0206123_104617851	3300021365	Seawater	CFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0213863_100331271	3300021371	Seawater	FLLLVGCGTKGGLYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0213861_103564622	3300021378	Seawater	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQFYKYKDEIFIDQKQLA
Ga0222717_102909382	3300021957	Estuarine Water	KKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0222717_104792981	3300021957	Estuarine Water	MKKYSFLFCFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLV
(restricted) Ga0233428_10076996	3300022888	Seawater	MKKNNFLIYFYILLLCGCGTKGDLYIPEEKYPQSQLEKYEDESFVEDKQFA
(restricted) Ga0233426_103145941	3300022920	Seawater	MKKYSFLICLYFLLQVGCGTKGELYIPEEKYPQSQLYKYKDEIFTNQKQLA
(restricted) Ga0233432_105042812	3300023109	Seawater	MKKYSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA
Ga0228696_10312512	3300023568	Seawater	FLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0228686_10417652	3300023685	Seawater	MKKNSFLICFFLLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0228683_10254301	3300023694	Seawater	ICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0228695_10236901	3300023699	Seawater	FLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0232119_10293012	3300023702	Seawater	LVGCGTKGELYIPEEKYPQSQLYKYKDEITYQKQLA
Ga0228684_10523992	3300023704	Seawater	FYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
(restricted) Ga0233435_10004925	3300024252	Seawater	MKKNNFLIYFYILFLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA
(restricted) Ga0233438_100169275	3300024255	Seawater	MKKYSFLIYFYFLLLIGCGTKGALYIPEEKYPQSQLNQYKDEIFTDQKQLS
(restricted) Ga0233438_103461682	3300024255	Seawater	MKKYSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLA
(restricted) Ga0233438_103753461	3300024255	Seawater	ICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA
(restricted) Ga0233446_11112102	3300024256	Seawater	CFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA
(restricted) Ga0233442_11747511	3300024257	Seawater	MKKYSFLVCFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
(restricted) Ga0233440_10940682	3300024258	Seawater	MKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLA
(restricted) Ga0233444_103388422	3300024264	Seawater	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSHLNQYKDEIFTDQKQLA
Ga0228623_10640182	3300024267	Seawater	FYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
(restricted) Ga0233449_10759922	3300024302	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA
(restricted) Ga0233445_100191916	3300024339	Seawater	MKKNNFLIYFYILLLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA
Ga0209685_10677781	3300025468	Marine	LFLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA
Ga0209774_10067011	3300025584	Marine	IYFYILLLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA
Ga0209361_11291061	3300025602	Marine	RMKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA
Ga0209716_11082251	3300025626	Pelagic Marine	DTRMKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0209197_10677351	3300025637	Pelagic Marine	LLLVGCGTKGGLYIPEQKYPQSQLNKYKDEIFTDQKQLA
Ga0209045_10084328	3300025660	Marine	LIYFYILFLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA
Ga0209360_10488952	3300025665	Marine	ICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA
Ga0209140_11358982	3300025688	Marine	MKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLS
Ga0209406_10820801	3300025694	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQK
Ga0209602_12401942	3300025704	Pelagic Marine	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA
Ga0209667_10245434	3300025707	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKD
Ga0209137_12614772	3300025767	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQHNKYKDEITDQKQLA
Ga0208545_10203813	3300025806	Aqueous	MKKYYFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYNDEITYQKQLA
Ga0209199_10808032	3300025809	Pelagic Marine	MKKYSFLICFYFLLLVGCGTKGGLYIPEQKYPQSHLNKYKNEIFTDQKQIA
Ga0209199_10988541	3300025809	Pelagic Marine	MKKYSFLICLYFLFLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0209199_11572532	3300025809	Pelagic Marine	MKKYSFLICFYFLLLLGCGTKGELYIPEEKYPQSQLNKYKDEIFSDQKQLA
Ga0209308_103999111	3300025869	Pelagic Marine	SFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0209533_10741373	3300025874	Pelagic Marine	YFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYNDEITYQKQLA
Ga0209533_13267642	3300025874	Pelagic Marine	MKKYSFLICFYFLILVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLS
Ga0209223_102242942	3300025876	Pelagic Marine	MKKYSFLIYFYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTVQKQLA
Ga0209632_101523372	3300025886	Pelagic Marine	MKKYSFLICFYFLLVVGCGTKGELYIPEEKYPQSQLNKYKDEIFTDQKQLA
Ga0209632_104244112	3300025886	Pelagic Marine	MKKYSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFT
Ga0209630_102424592	3300025892	Pelagic Marine	MKKYYFLICFYFLVLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTV
Ga0209335_104063342	3300025894	Pelagic Marine	RMKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0247570_10729311	3300026426	Seawater	NDKIRVXKNILFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0247578_10610112	3300026458	Seawater	MKKYSFLFCFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0247604_10430223	3300026460	Seawater	YFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0228622_11051051	3300026479	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEDKYPQSQLYKYKDEITDQKQLA
Ga0247592_10261582	3300026500	Seawater	LLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0247587_10252012	3300026504	Seawater	MKKYSFLICFYFLLLLGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0228604_10662392	3300026506	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPDEKYPQSQLNKYKDEITDQKQLA
Ga0228607_10224552	3300026517	Seawater	MKKYSFLIYFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0208948_10461581	3300027501	Marine	MKKYSFLICFFFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITD
Ga0208973_10741022	3300027506	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNQYKDEIFTDQKQLS
Ga0209384_10011929	3300027522	Marine	MKNNNILICLYIFFLCGCGTKGGLYIPEEKYPQSQLDKYKNEIFIEHKLLA
Ga0208304_103097981	3300027751	Estuarine	HMKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0208671_100524352	3300027757	Estuarine	MKKYSFLMCFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0209092_102739862	3300027833	Marine	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEIFSDQKQLA
Ga0209092_105548811	3300027833	Marine	MKKNSFLICLYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIFTNQKQLA
Ga0209092_105967211	3300027833	Marine	MKKYYFLICFYFLILVGCGTKGELYIPEEKYPQSQLNQYKDEIFIDQKKLA
Ga0247582_10962342	3300028109	Seawater	CFYFLLLVGCGTKGDLYIPEEKYPQSQLYKYKDEITDQKQLA
Ga0233397_11617711	3300028111	Seawater	MKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEIT
Ga0257124_10043201	3300028188	Marine	FLIYFYILFLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA
Ga0257119_10965281	3300028274	Marine	MKKNNFLIYFYILFLCGCGTKGDLYIPEEKYPQSQLEKYEDESFVEDKQFA
Ga0257119_11380582	3300028274	Marine	FLIYFYILLLCGCGTKGDLYIPEEKYPQSQLEKYEDESFVEDKQFA
Ga0257126_10927972	3300028287	Marine	MKKYSFLICLYFLLQVGCGTKGELYIPEEKYPQSQLYKYKDEIFTDQKQLA
Ga0228627_10500401	3300028414	Seawater	TRMKKYSFLICFYFLLLVGCGTKGELYIPEEKYPQSQLNKYKDEITDQKQLA
Ga0307488_102213692	3300031519	Sackhole Brine	MKNNNILICLYILFLCGCGTKGGLYIPEEKYPQSQLDKYKNEIFIEHKLLA
Ga0315332_105267221	3300031773	Seawater	LICFYFLLLVGCGTKGELYIPEEKYPQSQLYKYKDEITDQKQLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters