Metagenome / Metatranscriptome Family F026960

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F026960
Family Type	Metagenome / Metatranscriptome
Number of Sequences	196
Average Sequence Length	41 residues
Representative Sequence	LYRMGLLRTNGRPRSRRFIEFLRGQFPQAPELKREESRIIVP
Number of Associated Samples	142
Number of Associated Scaffolds	195

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.55 %
% of genes near scaffold ends (potentially truncated)	93.88 %
% of genes from short scaffolds (< 2000 bps)	87.76 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.061 % of family members)
Environment Ontology (ENVO)	Unclassified (29.082 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.551 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.14% β-sheet: 0.00% Coil/Unstructured: 82.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 195 Family Scaffolds
PF04055	Radical_SAM	22.05
PF00696	AA_kinase	3.59
PF02922	CBM_48	2.56
PF05721	PhyH	2.56
PF01850	PIN	2.56
PF11066	DUF2867	1.54
PF00930	DPPIV_N	1.54
PF10047	DUF2281	1.03
PF01425	Amidase	1.03
PF00933	Glyco_hydro_3	1.03
PF07505	DUF5131	1.03
PF01875	Memo	0.51
PF11218	DUF3011	0.51
PF00551	Formyl_trans_N	0.51
PF02518	HATPase_c	0.51
PF01872	RibD_C	0.51
PF03571	Peptidase_M49	0.51
PF01061	ABC2_membrane	0.51
PF08487	VIT	0.51
PF13840	ACT_7	0.51
PF07944	Glyco_hydro_127	0.51
PF02472	ExbD	0.51
PF09864	MliC	0.51
PF12323	HTH_OrfB_IS605	0.51
PF00072	Response_reg	0.51

COG ID	Name	Functional Category	% Frequency in 195 Family Scaffolds
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.56
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	1.54
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	1.54
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.03
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	1.03
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	1.03
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.51
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.51
COG1355	Predicted class III extradiol dioxygenase, MEMO1 family	General function prediction only [R]	0.51
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.51
COG3533	Beta-L-arabinofuranosidase, GH127 family	Carbohydrate transport and metabolism [G]	0.51

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.04 %
Unclassified	root	N/A	3.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.55 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.57 %
Unclassified	root	N/A	3.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.04 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.04 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.51 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Unclassified	root	N/A	3.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.04 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.04 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.51 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Unclassified	root	N/A	3.57 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.04 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.04 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.51 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Unclassified	root	N/A	3.57 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.04 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.51 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.51 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Unclassified	root	N/A	3.57 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.04 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.51 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.51 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001400\|JGI20183J14883_103321	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300001545\|JGI12630J15595_10021881	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300003351\|JGI26346J50198_1032480	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300004080\|Ga0062385_10174373	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005332\|Ga0066388_100985552	All Organisms → cellular organisms → Bacteria → Acidobacteria	1409	Open in IMG/M
3300005332\|Ga0066388_101129898	All Organisms → cellular organisms → Bacteria → Acidobacteria	1330	Open in IMG/M
3300005526\|Ga0073909_10544718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005537\|Ga0070730_10527950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300005555\|Ga0066692_10207751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300005557\|Ga0066704_10073595	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300005568\|Ga0066703_10719709	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300005586\|Ga0066691_10118354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1501	Open in IMG/M
3300005586\|Ga0066691_10580387	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300005921\|Ga0070766_10041838	All Organisms → cellular organisms → Bacteria → Acidobacteria	2543	Open in IMG/M
3300006034\|Ga0066656_10867751	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300006052\|Ga0075029_101308077	Not Available	509	Open in IMG/M
3300006174\|Ga0075014_100476865	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300006175\|Ga0070712_102035714	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300006176\|Ga0070765_100629916	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300006176\|Ga0070765_100649741	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300006791\|Ga0066653_10538452	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300006800\|Ga0066660_10820959	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300006806\|Ga0079220_10287853	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300006903\|Ga0075426_10416138	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300006904\|Ga0075424_101084728	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300007258\|Ga0099793_10284364	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300009012\|Ga0066710_100813315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1433	Open in IMG/M
3300009012\|Ga0066710_104131030	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300009038\|Ga0099829_11210207	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300009038\|Ga0099829_11735615	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300009088\|Ga0099830_10229812	All Organisms → cellular organisms → Bacteria → Acidobacteria	1461	Open in IMG/M
3300009088\|Ga0099830_10771214	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300009088\|Ga0099830_11075103	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300009090\|Ga0099827_10217929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1593	Open in IMG/M
3300009137\|Ga0066709_102955809	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300009162\|Ga0075423_10044226	All Organisms → cellular organisms → Bacteria → Acidobacteria	4564	Open in IMG/M
3300009162\|Ga0075423_12266747	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300009614\|Ga0116104_1014661	All Organisms → cellular organisms → Bacteria → Acidobacteria	2273	Open in IMG/M
3300009698\|Ga0116216_10321607	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300009824\|Ga0116219_10485495	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300010043\|Ga0126380_11723711	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300010048\|Ga0126373_10040892	All Organisms → cellular organisms → Bacteria → Acidobacteria	4077	Open in IMG/M
3300010048\|Ga0126373_10744199	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300010304\|Ga0134088_10006278	All Organisms → cellular organisms → Bacteria → Acidobacteria	4977	Open in IMG/M
3300010333\|Ga0134080_10239664	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300010360\|Ga0126372_11345564	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300010360\|Ga0126372_12726311	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300010361\|Ga0126378_12933228	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300010361\|Ga0126378_13214366	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300011106\|Ga0151489_1182667	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300011120\|Ga0150983_11863327	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300011271\|Ga0137393_10807801	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300011271\|Ga0137393_11711570	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300012096\|Ga0137389_11412327	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300012189\|Ga0137388_10048798	All Organisms → cellular organisms → Bacteria	3421	Open in IMG/M
3300012189\|Ga0137388_10171268	Not Available	1939	Open in IMG/M
3300012202\|Ga0137363_10253476	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300012202\|Ga0137363_10922384	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300012203\|Ga0137399_10201436	All Organisms → cellular organisms → Bacteria → Acidobacteria	1616	Open in IMG/M
3300012203\|Ga0137399_10211941	All Organisms → cellular organisms → Bacteria → Acidobacteria	1577	Open in IMG/M
3300012203\|Ga0137399_11532213	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300012209\|Ga0137379_10180310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2024	Open in IMG/M
3300012209\|Ga0137379_10228200	All Organisms → cellular organisms → Bacteria → Acidobacteria	1776	Open in IMG/M
3300012211\|Ga0137377_10439032	All Organisms → cellular organisms → Bacteria → Acidobacteria	1244	Open in IMG/M
3300012211\|Ga0137377_10727495	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300012211\|Ga0137377_10748296	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300012361\|Ga0137360_10035297	All Organisms → cellular organisms → Bacteria	3494	Open in IMG/M
3300012361\|Ga0137360_11638468	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300012362\|Ga0137361_10633994	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300012363\|Ga0137390_10690633	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300012363\|Ga0137390_10792878	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300012582\|Ga0137358_10299451	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300012582\|Ga0137358_10299451	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300012683\|Ga0137398_10940099	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300012918\|Ga0137396_10232283	All Organisms → cellular organisms → Bacteria → Acidobacteria	1359	Open in IMG/M
3300012918\|Ga0137396_10908106	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300012918\|Ga0137396_11109915	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300012922\|Ga0137394_10010446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7262	Open in IMG/M
3300012922\|Ga0137394_11439071	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300012922\|Ga0137394_11483325	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300012923\|Ga0137359_10501552	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300012923\|Ga0137359_10705680	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300012924\|Ga0137413_10136350	All Organisms → cellular organisms → Bacteria → Acidobacteria	1585	Open in IMG/M
3300012925\|Ga0137419_10103485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1976	Open in IMG/M
3300012925\|Ga0137419_11363402	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300012927\|Ga0137416_12174820	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300012930\|Ga0137407_12259542	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300012948\|Ga0126375_10506797	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300012964\|Ga0153916_11752185	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300012971\|Ga0126369_10763987	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300012977\|Ga0134087_10520503	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300015054\|Ga0137420_1489636	All Organisms → cellular organisms → Bacteria → Acidobacteria	2139	Open in IMG/M
3300015054\|Ga0137420_1495568	All Organisms → cellular organisms → Bacteria → Acidobacteria	4175	Open in IMG/M
3300015264\|Ga0137403_10642124	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300016319\|Ga0182033_10343985	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300016319\|Ga0182033_11647267	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300016371\|Ga0182034_12002340	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300016445\|Ga0182038_10340652	All Organisms → cellular organisms → Bacteria → Acidobacteria	1239	Open in IMG/M
3300017822\|Ga0187802_10113126	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300017823\|Ga0187818_10316815	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300017934\|Ga0187803_10338765	Not Available	604	Open in IMG/M
3300017955\|Ga0187817_10366848	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300017955\|Ga0187817_10981933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300017970\|Ga0187783_10267225	All Organisms → cellular organisms → Bacteria → Acidobacteria	1250	Open in IMG/M
3300017975\|Ga0187782_11670149	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300017995\|Ga0187816_10093711	All Organisms → cellular organisms → Bacteria → Acidobacteria	1286	Open in IMG/M
3300018004\|Ga0187865_1074969	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300018086\|Ga0187769_10543035	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300018086\|Ga0187769_10855805	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300018088\|Ga0187771_11339093	Not Available	607	Open in IMG/M
3300018468\|Ga0066662_10987856	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300018482\|Ga0066669_10002698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7406	Open in IMG/M
3300020199\|Ga0179592_10130025	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300020199\|Ga0179592_10218516	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300020199\|Ga0179592_10364283	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300020579\|Ga0210407_10848835	Not Available	702	Open in IMG/M
3300020579\|Ga0210407_10866233	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300020579\|Ga0210407_11003820	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300020580\|Ga0210403_10380579	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300020580\|Ga0210403_10388180	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300020580\|Ga0210403_10488920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300020580\|Ga0210403_10635819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	859	Open in IMG/M
3300020580\|Ga0210403_10824463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	736	Open in IMG/M
3300020580\|Ga0210403_11080097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300021046\|Ga0215015_10201999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300021088\|Ga0210404_10665773	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300021168\|Ga0210406_10069446	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300021168\|Ga0210406_10274100	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300021168\|Ga0210406_10422757	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300021170\|Ga0210400_11261579	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300021178\|Ga0210408_10348607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300021178\|Ga0210408_10426395	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300021180\|Ga0210396_10107327	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300021180\|Ga0210396_10145398	All Organisms → cellular organisms → Bacteria → Acidobacteria	2131	Open in IMG/M
3300021181\|Ga0210388_11166354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300021405\|Ga0210387_10238203	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300021405\|Ga0210387_10546420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300021407\|Ga0210383_10020356	All Organisms → cellular organisms → Bacteria → Acidobacteria	5582	Open in IMG/M
3300021407\|Ga0210383_11279440	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300021432\|Ga0210384_10393647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1248	Open in IMG/M
3300021474\|Ga0210390_10042051	All Organisms → cellular organisms → Bacteria → Acidobacteria	3739	Open in IMG/M
3300021477\|Ga0210398_10155029	All Organisms → cellular organisms → Bacteria → Acidobacteria	1864	Open in IMG/M
3300021479\|Ga0210410_10511921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1071	Open in IMG/M
3300021479\|Ga0210410_11090219	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300021559\|Ga0210409_10373653	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300021560\|Ga0126371_12241562	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300022873\|Ga0224550_1069834	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300024288\|Ga0179589_10320033	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300024288\|Ga0179589_10327306	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300024288\|Ga0179589_10470010	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300024290\|Ga0247667_1004446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	3065	Open in IMG/M
3300024331\|Ga0247668_1080950	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300025899\|Ga0207642_10151420	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300026318\|Ga0209471_1269408	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300027069\|Ga0208859_1038903	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300027173\|Ga0208097_1041308	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300027701\|Ga0209447_10049440	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300027821\|Ga0209811_10109545	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300027846\|Ga0209180_10561723	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300027857\|Ga0209166_10013734	All Organisms → cellular organisms → Bacteria → Acidobacteria	5174	Open in IMG/M
3300027862\|Ga0209701_10003875	All Organisms → cellular organisms → Bacteria → Acidobacteria	9825	Open in IMG/M
3300027884\|Ga0209275_10297871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	894	Open in IMG/M
3300027894\|Ga0209068_10319846	All Organisms → cellular organisms → Bacteria → Acidobacteria	874	Open in IMG/M
3300027895\|Ga0209624_10551109	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300027903\|Ga0209488_10651971	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300027911\|Ga0209698_10393349	All Organisms → cellular organisms → Bacteria → Acidobacteria	1084	Open in IMG/M
3300028047\|Ga0209526_10197362	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300028047\|Ga0209526_10787329	Not Available	590	Open in IMG/M
3300028906\|Ga0308309_10660116	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300030659\|Ga0316363_10278651	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300030706\|Ga0310039_10249756	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300030707\|Ga0310038_10323082	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300031057\|Ga0170834_100972346	Not Available	729	Open in IMG/M
3300031682\|Ga0318560_10081337	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300031718\|Ga0307474_10710911	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300031719\|Ga0306917_11374762	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300031720\|Ga0307469_10111527	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300031730\|Ga0307516_10603586	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300031740\|Ga0307468_102016962	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300031744\|Ga0306918_10082164	All Organisms → cellular organisms → Bacteria → Acidobacteria	2245	Open in IMG/M
3300031753\|Ga0307477_10110923	All Organisms → cellular organisms → Bacteria → Acidobacteria	1909	Open in IMG/M
3300031753\|Ga0307477_10750100	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300031763\|Ga0318537_10164403	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300031777\|Ga0318543_10045175	All Organisms → cellular organisms → Bacteria → Acidobacteria	1780	Open in IMG/M
3300031797\|Ga0318550_10537267	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031912\|Ga0306921_10163916	All Organisms → cellular organisms → Bacteria → Acidobacteria	2602	Open in IMG/M
3300031962\|Ga0307479_10639402	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300031962\|Ga0307479_11768729	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300031962\|Ga0307479_11784455	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300032001\|Ga0306922_10448539	All Organisms → cellular organisms → Bacteria → Acidobacteria	1379	Open in IMG/M
3300032035\|Ga0310911_10730556	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300032060\|Ga0318505_10115380	All Organisms → cellular organisms → Bacteria → Acidobacteria	1226	Open in IMG/M
3300032065\|Ga0318513_10596830	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300032076\|Ga0306924_10980537	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300033982\|Ga0371487_0027063	All Organisms → cellular organisms → Bacteria → Acidobacteria	3747	Open in IMG/M
3300034091\|Ga0326724_0216304	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.94%
Host-Associated	Host-Associated	3.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.78%
Aquatic	Environmental → Aquatic	8.16%
Plants	Host-Associated → Plants	3.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.24%
Freshwater	Environmental → Aquatic → Freshwater	6.12%
Sediment	Environmental → Aquatic → Sediment	2.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.04%
Peat	Environmental → Terrestrial → Peat	1.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.51%
Roots	Host-Associated → Plants → Roots	0.51%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.04%
Loam	Environmental → Terrestrial → Soil → Loam	7.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.51%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.51%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.51%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.51%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.06%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.04%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.04%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.02%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.02%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.51%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.51%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.51%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.51%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.51%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001400	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20183J14883_1033212	3300001400	Arctic Peat Soil	TNGRPRARRYIEFLRGQFPDAQELKKEESRIILP*
JGI12630J15595_100218811	3300001545	Forest Soil	RMGLLRTNGRPRSRKFIEFLRGQFPGAQELKHEESRIIVP*
JGI26346J50198_10324802	3300003351	Bog Forest Soil	FFFRMGLLRTNGRLRSRRFIEFLRGQFPGAQELKREQSRIIVP*
Ga0062385_101743731	3300004080	Bog Forest Soil	VFLYRMGLLRMNGRPRSRRYIEFLRSQFPQTSELKREESRIIVP*
Ga0066388_1009855521	3300005332	Tropical Forest Soil	FLYRMGLLRTNGRPRSRRYIEFLRNQFPEAKELKREESRIIVP*
Ga0066388_1011298981	3300005332	Tropical Forest Soil	MGLLRSNGRPRSRRFIEFLRGQFSQSEELKREAPRIIVP*
Ga0073909_105447182	3300005526	Surface Soil	LYRMGLLRTNGRPRARRYLEFLRGQFPASPELKREESRIIVP*
Ga0070730_105279501	3300005537	Surface Soil	LLVFLYRMGLLRTNGRRRARRYLEFLRNQFPAAPELKREESRIIAP*
Ga0066692_102077512	3300005555	Soil	MGLLRTNGRPHSRRFIEFLRGQFPQSPELQREESRIIVP*
Ga0066704_100735953	3300005557	Soil	LRTNGRPRSRRFIEFLRGQFPQSPELQREESRIIVP*
Ga0066703_107197091	3300005568	Soil	GLLRTNGRPRSRRFIEFLRGQFPQSPELQREESRIIVP*
Ga0066691_101183542	3300005586	Soil	RMGLLRTNGRPRSRRFIEFLRGQFPQSPELKREESHIIVP*
Ga0066691_105803872	3300005586	Soil	HVLVFLYRMGLLRTNGRPKSRRFIEFLRAQFPQARELKKEEARIIVP*
Ga0070766_100418381	3300005921	Soil	MGLLRTNGRPRARRYVEFLRGQFPAAPELKREESRIIVP*
Ga0066656_108677512	3300006034	Soil	RTNGRPRSRRFIEFLRGQFPVAPDLKREESRIIVP*
Ga0075029_1013080772	3300006052	Watersheds	TNGRPRSRRFIEFLRGQFPGAHELKREESRIIVP*
Ga0075014_1004768652	3300006174	Watersheds	LVFLYRMGLLRTNGRSRSRRFIEFLRGQFPQAPELKREESRIIVP*
Ga0070712_1020357141	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RMGLLRTNGRPRSRRFIEFLRGQFPGAYELKREESCIIVP*
Ga0070765_1006299162	3300006176	Soil	YLLVFLYRMGLLRTNGRLRSRRYIEFLRGQFPETQELKREESRIIMP*
Ga0070765_1006497411	3300006176	Soil	LLVFLYRMGLLRTNGRSRSRRYVEFLRGQFPNVQELKREESRIIIP*
Ga0066653_105384521	3300006791	Soil	AIFLFRMGLLRGNGSPRSRRFIEFLRGQFPQAEELKREEPRVIMP*
Ga0066660_108209591	3300006800	Soil	MGLLRTNGRPRSRLFIEFLRRQFPQAPELQREQSRIIMP*
Ga0079220_102878531	3300006806	Agricultural Soil	MGLLRTNGRPRSRQFIEFLRGQFPQAPELKREESRIIVP*
Ga0075426_104161381	3300006903	Populus Rhizosphere	YRMGLLRSNGRPRSRRFIEFLRRQFPQAEELKREEPRIIVP*
Ga0075424_1010847281	3300006904	Populus Rhizosphere	VFLYRMGLLRTNGRPRSRRYVQFLRGQFPQSQDVKREESRIIVP*
Ga0099793_102843641	3300007258	Vadose Zone Soil	YRMGLLRTNGRPRSRRYIEFLRSQFPQAEELKREESRIIVP*
Ga0066710_1008133151	3300009012	Grasslands Soil	MGLLRTNGRPRSRRFIEFLRGQFPQSPELQREESRIIVP
Ga0066710_1041310301	3300009012	Grasslands Soil	MGLLRTNGRPRSRRFIEFLRGQFPVAPDLKREESRIIVP
Ga0099829_112102072	3300009038	Vadose Zone Soil	LLRTNGRPRSRRFIEFLRGQFPQAPELKREESRIIVP*
Ga0099829_117356151	3300009038	Vadose Zone Soil	SEIFQLLVFLYRTGLLRTNGRSRSRRFLEFLRGQFPGAHELKREESRLIHP*
Ga0099830_102298121	3300009088	Vadose Zone Soil	YRMGLRRTNGRPRSRRYIEFLRSQFPEAPELKREESRIIVP*
Ga0099830_107712142	3300009088	Vadose Zone Soil	LYRMGLRRTNGRPRSRRYIEFLRSQFPEAPELKREESRIIVP*
Ga0099830_110751032	3300009088	Vadose Zone Soil	RTNGRPRSRRFIEFMRGQFPQAPELKREESRIIVP*
Ga0099827_102179292	3300009090	Vadose Zone Soil	LNRMGLLRTNGRPRSRRFIEFLRGQFPQAPELKREESRIIVP*
Ga0066709_1029558091	3300009137	Grasslands Soil	MGLLRTNGRPRSRRFIEFLRGQFPQSPELQREESRIIVP*
Ga0075423_100442265	3300009162	Populus Rhizosphere	LLRSNGRPRSRRFIEFLHGQFPQAEELKREEPRIIVP*
Ga0075423_122667472	3300009162	Populus Rhizosphere	SNGRPRSRRFIEFLRGQFPQAEELKREEPRIIVP*
Ga0116104_10146611	3300009614	Peatland	MGILRTNGRSRSRLFIEFLRGQFPGAEELKQEESRIIVP*
Ga0116216_103216072	3300009698	Peatlands Soil	LRTNGRSRSRRFIEFLRGQFPGAQELKREESRIIVP*
Ga0116219_104854952	3300009824	Peatlands Soil	FQLLVFLFRMGILRTNGRSRSRRFIEFLRGQFPGAQELKREESRIIVP*
Ga0126380_117237111	3300010043	Tropical Forest Soil	MGLLRGNARPRSRRFIEFLRGQFPQAEELKREQPHIILP*
Ga0126373_100408924	3300010048	Tropical Forest Soil	FLFRMGLLRANGRPRSRRFIEFLRGQFPGAQDLKREESRIIVP*
Ga0126373_107441992	3300010048	Tropical Forest Soil	VLVFLYRMGLLRSNGRPKSRKFIEFLRGQFPQAQELKKEESRIIVP*
Ga0134088_100062781	3300010304	Grasslands Soil	LLVFLYRMGLLRTNGRRRSRRFIEFLRGQFPQSPELQREESHIIVP*
Ga0134080_102396642	3300010333	Grasslands Soil	LVFLYRMGLLHANGRPRSRKFIEYLHAQFPKSEDRVREEPRIIVP*
Ga0126372_113455643	3300010360	Tropical Forest Soil	LRTNGRPRSRLFIEFLRGQFPQSSQLKREESRIIIP*
Ga0126372_127263112	3300010360	Tropical Forest Soil	YRMGLLQTNERPRSRMFIEFLRSQFPQAPEVKREESRIIIP*
Ga0126378_129332282	3300010361	Tropical Forest Soil	VFLYRMSLLRANGRPRSRRFIEFLRGQFPQAEELKREEPRIIVP*
Ga0126378_132143662	3300010361	Tropical Forest Soil	GLLRTNGRPRSRRFIEFLRGQFPGVHERKREQSRIILP*
Ga0151489_11826671	3300011106	Soil	RMGLLRTNGRPRSRRFIEFLRNQFPQSPELKREETRIIVP*
Ga0150983_118633272	3300011120	Forest Soil	LVFLYRMGLLRTNGRPRSRRYIEFLRSQFSQTPELKREESRIIVP*
Ga0137393_108078012	3300011271	Vadose Zone Soil	LYRMGLLRTNGRPRSRRFIEFMRGQFPQAPELKREESRIIVP*
Ga0137393_117115701	3300011271	Vadose Zone Soil	LRRTNGRPRSRRYIEFLRSQFPEAPELKREESRIVVP*
Ga0137389_114123271	3300012096	Vadose Zone Soil	TNGRPRARRYIAFLRGQFPEARELQREESRIIVP*
Ga0137388_100487982	3300012189	Vadose Zone Soil	MGLLRTNGRPRSRRFIEFLRGQFPGAHELKREESRIIIP*
Ga0137388_101712681	3300012189	Vadose Zone Soil	VFLYRMGLLRTNGRPRSRRYIEFLRSQFPQAQELKREESRIIVP*
Ga0137363_102534762	3300012202	Vadose Zone Soil	MGLLRTKGRPRSRRFIESLRDQFPGAHELKREESRIIVP*
Ga0137363_109223841	3300012202	Vadose Zone Soil	LLRTNGRPRSRRFIEFLRAQFPAAPELKREESRIIVP*
Ga0137399_102014361	3300012203	Vadose Zone Soil	LYRMGLLRTNGRPRSRRFVEFLRGQFPGAHELKREESRIIVP*
Ga0137399_102119411	3300012203	Vadose Zone Soil	YRMGLLRTNGRPRSRRFIEFLRGQFPQSPELKRETSRIIVP*
Ga0137399_115322132	3300012203	Vadose Zone Soil	FLFRMGLLRGNGRPRSRRFIEFLRGQFPQAEELKREEPRIIMP*
Ga0137379_101803103	3300012209	Vadose Zone Soil	GLLHANGRPRSRKFIEYLHAQFPKSEDRVREEPRIIVP*
Ga0137379_102282001	3300012209	Vadose Zone Soil	YRMGLLRTNGRPRSRLFIEFLRGQFPQAPELKREESRIIVP*
Ga0137377_104390322	3300012211	Vadose Zone Soil	GLLRTNGRPRSRRFIAFLRGQFPQAPELKREESRIIVP*
Ga0137377_107274952	3300012211	Vadose Zone Soil	LLRTNGRPRSRRFIEFLRSQFPQSPELKREESRIIVP*
Ga0137377_107482961	3300012211	Vadose Zone Soil	MGLLRTNGRPRSRRFIEFLRSQFPQSPELKREESRIIVP*
Ga0137360_100352973	3300012361	Vadose Zone Soil	FLYRMGLLRTNGRPRSRRFVEFLRGQIPGAHELKREESRIIVP*
Ga0137360_116384681	3300012361	Vadose Zone Soil	RTNGRPRSRRFIEFLRAQFPQSPELKREESRIIVP*
Ga0137361_106339942	3300012362	Vadose Zone Soil	VFLYRMGLLRTNGRPRSRRYIEFMRSQFPEAQELKREESRIIVP*
Ga0137390_106906331	3300012363	Vadose Zone Soil	LYRMGLLRTNGRPRSRRFIEFLRAQFPQSPELKREESRIIVP*
Ga0137390_107928781	3300012363	Vadose Zone Soil	TNGRPRSRRYIEFLRSQFPEAPELKREESRIIVP*
Ga0137358_102994511	3300012582	Vadose Zone Soil	MGLLRTNGRTRSRRFVEFLRGQFPGAHELKREESRIIVP*
Ga0137358_102994514	3300012582	Vadose Zone Soil	LYRMGLLRTNGRPRSRRFVEFLRGQFPGAHELNREESRIIVP*
Ga0137398_109400992	3300012683	Vadose Zone Soil	FLYRMGLLRTNGRPRSRRYVEFLRSQFPEAQELKREESRIIVP*
Ga0137396_102322831	3300012918	Vadose Zone Soil	LRTNGRPRSRRYIAFLSGQFPEAQELKREESRIIVP*
Ga0137396_109081061	3300012918	Vadose Zone Soil	RTNGRPRSRRFIEFLRGQFPAAPDLKREESRIIVP*
Ga0137396_111099151	3300012918	Vadose Zone Soil	DIFYLLVFLYRMGLLRTNGRARTRRYIEFLRSQFPQAQELKREESRIIVP*
Ga0137394_100104468	3300012922	Vadose Zone Soil	RMGLLRTNGRPRSRRFIEFLRGQFPQSPELKREASRIIVP*
Ga0137394_114390712	3300012922	Vadose Zone Soil	FLYRMGLLRTNGRPRSRRYIEFLRSQFPEAQELKREESRIIVP*
Ga0137394_114833252	3300012922	Vadose Zone Soil	GLLRTNGRPRSRRFIEFLRSQFPAAAELKREESRIIAP*
Ga0137359_105015521	3300012923	Vadose Zone Soil	RRNGGPRWRRFIEFLRGQFPQAEELKREEPRIIMP*
Ga0137359_107056801	3300012923	Vadose Zone Soil	YRMGLLRTNGRPRSRRFIEFLRSQFPQSPDLKREESRIIVP*
Ga0137413_101363502	3300012924	Vadose Zone Soil	FYVVIFLFRMGLLRGNGRPRSRRFIEFLRGQFHQAEELKHEEPRIIMP*
Ga0137419_101034853	3300012925	Vadose Zone Soil	LYRMGLLHTNGRPRSRRFIEFLRAQFPQAPELKREESRIIVP*
Ga0137419_113634022	3300012925	Vadose Zone Soil	GLLRTNGRPRSRRYIEFLRSQFPEAQELKRGESRIIVP*
Ga0137416_121748201	3300012927	Vadose Zone Soil	MGLLRTNGRPRSRRFVEFLRGQFPGAHELKREESRIIVP*
Ga0137407_122595422	3300012930	Vadose Zone Soil	TNGRPRARRYITFLRGQFPEARELQREESRIIVP*
Ga0126375_105067972	3300012948	Tropical Forest Soil	FLYRMGLLRSNSRPRSRHFIEFLRGQFPQVPELKREESRIIVP*
Ga0153916_117521851	3300012964	Freshwater Wetlands	LLVFLYRMGLLRSNGRPRSRRFVEFLRSQLPQSPELPRAEPRIIVP*
Ga0126369_107639872	3300012971	Tropical Forest Soil	IFLFRMGLLRSNGRARSRRYIEFLRGQFPQAEELKREAPRIILP*
Ga0134087_105205032	3300012977	Grasslands Soil	RTNGRPRSRRFIEFLRGQFPQSPELQREESRIIVP*
Ga0137420_14896363	3300015054	Vadose Zone Soil	MGLLRTNGRPRSRRFIEFLRGQFPQSPELNREESRIIVP*
Ga0137420_14955686	3300015054	Vadose Zone Soil	MGLLRINGRPRSRRFIEFLRGQFPQSPELKREESRIIVP*
Ga0137403_106421242	3300015264	Vadose Zone Soil	LLRTNGRPRARRFIEFLRGQFPQSPELQREESRIIVP*
Ga0182033_103439852	3300016319	Soil	MGLLRANGRPRSRRFIEFLRGQFPGAQDLKREESRIIVP
Ga0182033_116472671	3300016319	Soil	LLRTNGRSRSRRFIEFLRSQFPGTPELQREPSRIIVP
Ga0182034_120023402	3300016371	Soil	FFVIIFLFRMGLLRSNGLSRSRRYVEFLRGQFPQAEELKRDAPRIIVL
Ga0182038_103406522	3300016445	Soil	FLFRMGLLRANGRPRSRRFIEFLHGQFPGAQDLKREESRIIVP
Ga0187802_101131262	3300017822	Freshwater Sediment	ALLVFLFRMGLLRTNGRSRSRRFIEFLRGQFPGAQELKREESRIIVP
Ga0187818_103168152	3300017823	Freshwater Sediment	YRMGLLRTNGRVRSRRFIEFLRGQFPQAPELKREESRIIVP
Ga0187803_103387652	3300017934	Freshwater Sediment	LRTNGRPRSRRFIEFLRGQFHGAQELKREESRIIVQ
Ga0187817_103668481	3300017955	Freshwater Sediment	RMGLLRTNGRARSRRFIEFLRGQFPQAPELKREESRIIVP
Ga0187817_109819331	3300017955	Freshwater Sediment	RMGLLRTNGRPRARRYIEFLRGQFPAAPELKREESRIIVP
Ga0187783_102672253	3300017970	Tropical Peatland	FQLLVFLFRMGLLRTNGRSRSRRFIEFLRGQFPGAQELKREQSHIIVP
Ga0187782_116701492	3300017975	Tropical Peatland	LYRMGLLRTNGRPRSRRFIEFLRGQFPQAPELKREESRIIVP
Ga0187816_100937111	3300017995	Freshwater Sediment	MGLLRTNGRPRSRRFIEFLRGQFPGVQELQREQSRIIVP
Ga0187865_10749691	3300018004	Peatland	IFQLLVFLFRMGILRTNGRSRSRLFIELLRGQFPGAKELKQEESRIIVP
Ga0187769_105430352	3300018086	Tropical Peatland	FYLLVFLYRMGLLRTNGRSRSHRFIEFLRGQFPQAPELKREESRIIVP
Ga0187769_108558052	3300018086	Tropical Peatland	LLRTNGRSRSRRFIEFLRGQFPGAQELKREESRIIVP
Ga0187771_113390932	3300018088	Tropical Peatland	RSNGRPRARAFIEFLRAQFPREMGLAKEESRIIVP
Ga0066662_109878561	3300018468	Grasslands Soil	RTNGRPRSRRFIEFLRGQFPQSPELKREESRIIVP
Ga0066669_100026988	3300018482	Grasslands Soil	YREGFVRTNGSPRSRRIIEFLRGQIPQSPELKREESRIIVP
Ga0179592_101300252	3300020199	Vadose Zone Soil	MGLLRTKGRPRSRRFIESLRDQFPDAHELKREESRIIVP
Ga0179592_102185162	3300020199	Vadose Zone Soil	LYRMGLLRTNGRPRSCRYIEFLRSQFPEAQELKREESRIIVP
Ga0179592_103642832	3300020199	Vadose Zone Soil	FLYRMGLLRTNGRPRSRRFIEFLRGQFPEAPELKREESRIIVT
Ga0210407_108488352	3300020579	Soil	EIFYLLVFLYRMGLLRTNGRSRSRRYIEFLRSQFPQAQELKREESRIIVP
Ga0210407_108662332	3300020579	Soil	MGLLRTNGRPRSRRYIEFLRSQFPNVQELKREESRIIVP
Ga0210407_110038201	3300020579	Soil	FLYRMGLLRTNGRPRSRRFIEFLRAQFPQSPELKREESRIIVP
Ga0210403_103805792	3300020580	Soil	LYRMGLLRTNGRPRSRRYIEFLRGQFPEAQELKREESRIIVP
Ga0210403_103881802	3300020580	Soil	FLQRMGLMRTNGRPKSRRFIEFLRAQFPQSQDVKREESRIIVP
Ga0210403_104889201	3300020580	Soil	LRTNGRPRSRRFLEFLRGQFPGAHELKREESRIIVP
Ga0210403_106358192	3300020580	Soil	MGLLRTNGRPRARRYIEFLRNQFPAAPELKREESRIIVP
Ga0210403_108244633	3300020580	Soil	YRMGLLRTNGRSRSRRFIEFLRGQFPCAHELKREESRIIVP
Ga0210403_110800972	3300020580	Soil	LYRMGLLRTNGRPRSRRFIEFLRGQFPGAHELKREESRIIVP
Ga0215015_102019992	3300021046	Soil	LYRMGLLRASGRPRSRRFIEFLCGQFPGAHELKREESRIIVP
Ga0210404_106657732	3300021088	Soil	YRMGLLRTNGRPRSRRFIEFLRAQFSQAPELKREESRIIVP
Ga0210406_100694463	3300021168	Soil	MGLLRTNGRPRSRSFIEFLRGQFPGAHELKRKESRIIVP
Ga0210406_102741003	3300021168	Soil	LYRMGLLRTNGRPRSRRFLEFLRGQFPGAHELKREESRIIVP
Ga0210406_104227571	3300021168	Soil	MGLLRTNARPRSRRFIEFLRGQFPGSHELKREESRIIVP
Ga0210400_112615791	3300021170	Soil	LRTNGRPRSRRFIEFLRGQFPQSPELKREESRIIVP
Ga0210408_103486071	3300021178	Soil	RMGLLRTNGRPRSRRYIEFLRGQFPEAQELKREESRIIVP
Ga0210408_104263951	3300021178	Soil	WVFLYRMGLLRTNGRRRSRRFIEFLRSQFPQSPELKREESRIIVP
Ga0210396_101073271	3300021180	Soil	PYRMGLLRTNGRPRARRYVEFLRSQFPAAPELKREESRIIVP
Ga0210396_101453981	3300021180	Soil	FLSACFLYRMGWLRTNGRPRSRRFIEFLRAQFPQAPELKREENRIIVP
Ga0210388_111663541	3300021181	Soil	GLLRTNGRLRARRYIEFLRGQFPAAPELKREESRIIVP
Ga0210387_102382031	3300021405	Soil	VFIYRMGLLRTNGRPRSRRFLEFLRGQFLGAHELEREESRIIVP
Ga0210387_105464201	3300021405	Soil	LRTNNRPRARRYVEFLRGQFPAAPELKREESRIIVP
Ga0210383_100203564	3300021407	Soil	LRTNGRPRARRYIEFLRGQFPAAPELKREESRIIVP
Ga0210383_112794402	3300021407	Soil	YYLLVFLYRMGLLRTNGRLRSRRYIEFLRGQFPETQELKKEESRIIIP
Ga0210384_103936471	3300021432	Soil	YRMGLLRTNGRPRSRRFIEFLRGQFPGAHELKREESRIIVP
Ga0210390_100420514	3300021474	Soil	LRTNGRPRARRYTEFLRGQFPAAPELKHEESRIIIP
Ga0210398_101550292	3300021477	Soil	YRLVDLYRMGLLRTNGRPRSRRYIEFLRNQFPNVQELKREESRIIVP
Ga0210410_105119212	3300021479	Soil	YRMGLLRTNGRPRARRYVEFLRGQFPAAPELKREESRIIVP
Ga0210410_110902192	3300021479	Soil	LFLYRMGLLRTNGRLRSRRYIEFLRGQFPETQELKREESRIIMP
Ga0210409_103736531	3300021559	Soil	LLRTNGRPRSRRFIEFLRGQFPGAHELKREESRIIVP
Ga0126371_122415622	3300021560	Tropical Forest Soil	FLYRMGLLRSNGRPRSRRFIEFLRGQFPQAKEPEPEAPRIIVP
Ga0224550_10698341	3300022873	Soil	LYRMGLLRSNGRPRSRRYVEFLRGQFPNVPELKREESRIIVP
Ga0179589_103200332	3300024288	Vadose Zone Soil	LRTNGRPRSRRFVEFLRGQFPGAHELKREESRIIVP
Ga0179589_103273062	3300024288	Vadose Zone Soil	FLYRMGLLRTNGRPRSRRFIEFLRSQFPQSPELKREESRIIVP
Ga0179589_104700102	3300024288	Vadose Zone Soil	MGLLRTNGRTRSRRFVEFLGGQFPGAHELRREESRIIVP
Ga0247667_10044461	3300024290	Soil	LLHTNGRPRARRYLEFLRNQFPAAPELKREESRIIAP
Ga0247668_10809501	3300024331	Soil	LLRSNGRPRSRRFIEFLRGQFPQAEELKREEPRIIVP
Ga0207642_101514202	3300025899	Miscanthus Rhizosphere	RMGLLRSNGRPRSRRFIEFLRGRFPQAEELKREEPRIIVP
Ga0209471_12694082	3300026318	Soil	LLRTNGRPRSRRFIEFLRGQFPQSPELQREESRIIVP
Ga0208859_10389032	3300027069	Forest Soil	YRMGLLRTNGRPRSRRFIEFLRGQFPQAPEVKREESRIIVP
Ga0208097_10413082	3300027173	Forest Soil	YRMGLLRTNGRSRSRRFIEFLRGQFPQAPELKREESRIIVP
Ga0209447_100494403	3300027701	Bog Forest Soil	LVFLYRMGLLRMNGRPRSRRYIEFLRSQFPQTSELKREESRIIVP
Ga0209811_101095451	3300027821	Surface Soil	FHVTVFLYRMGLIRSNGRTRSRRFIEFLRAQFPATDELKKDEPRIIVP
Ga0209180_105617231	3300027846	Vadose Zone Soil	GLLRTNGRPRSRRFIEFMRGQFPQAPELKREESRIIVP
Ga0209166_100137345	3300027857	Surface Soil	MGLLRGNGRPRSRRFIEFLRGQFHEAEELKREETRIILP
Ga0209701_100038751	3300027862	Vadose Zone Soil	YRMGLLRTNGRPRSRRFIEFLRGQFPAAPDLKREEFRIIVP
Ga0209275_102978711	3300027884	Soil	LRTNGRPRARRYVEFLRSQFPAAPELKREESRIIVP
Ga0209068_103198461	3300027894	Watersheds	FHVLVFLHRMGLMRTNGRPKSRRFIEFLRAQFPQSEDLKREESRIIVP
Ga0209624_105511091	3300027895	Forest Soil	ILVFLYRMGLLRTNGRLRSRRYIEFLRGQFPETQELKREESRIIMP
Ga0209488_106519711	3300027903	Vadose Zone Soil	YRMGLLRTNGRPRSRRYIAFLSGQFPEAQELKREESRIIVP
Ga0209698_103933491	3300027911	Watersheds	RTNGRPRSRRFIEFLRSQFPQSPELKREESRIIVP
Ga0209526_101973622	3300028047	Forest Soil	MGLLRTNGRPRSRRFIEFLRGQFPQSPELKREESRIIVP
Ga0209526_107873292	3300028047	Forest Soil	IRTNGRPRSRRFIEFLRGQFPGAHELKREESRIIVP
Ga0308309_106601161	3300028906	Soil	RTNGRPRSRRYIEFLRSQFPNFQELKREESRIIVP
Ga0316363_102786512	3300030659	Peatlands Soil	LVFLFRMGLLRSKGRPRSRRFIEFLRGQFPSAPELKHEESRIIVP
Ga0310039_102497562	3300030706	Peatlands Soil	RTNGRSRSRRFIEFLRGQFPGAQELKHEESRIIVP
Ga0310038_103230822	3300030707	Peatlands Soil	ILRTNGRSRSRRFIEFLRGQFPGAQELKREESRIIVP
Ga0170834_1009723461	3300031057	Forest Soil	YRMGLIRTNGRPRSRRFIEFLRGQFPGAQELKREESRIIVP
Ga0318560_100813372	3300031682	Soil	FRMGLLRANGRPRSRCFIEFLRGQFPGAQELKREESRIIVP
Ga0307474_107109111	3300031718	Hardwood Forest Soil	YLLVFLYRMGLLRTNGRLRSRRYIEFLRGQFPETQELKREESRIIMP
Ga0306917_113747621	3300031719	Soil	IFQLLVFLYRMGLLRTNRRPRSRRLIEFLRGQFPGAQELKREESRIILP
Ga0307469_101115274	3300031720	Hardwood Forest Soil	MGLLRTNGRPRSRRFIEFLRGQFPGAHELKREESRIIVP
Ga0307516_106035862	3300031730	Ectomycorrhiza	AMRDIDIFHVTVFLYRMGLIRSNGRTRSRRFIEFLRAQFPATDELKKDEPRIIVP
Ga0307468_1020169621	3300031740	Hardwood Forest Soil	MGLLRTNGRPRSRRFIEFLRGQFPAVPELKREESRIIVP
Ga0306918_100821643	3300031744	Soil	FLFRMGLLRANGRPRSRRFIEFLRGQFPGAQDLKREESRIIVP
Ga0307477_101109231	3300031753	Hardwood Forest Soil	LRTNGRPRSRRFIEFLRGQFPGAQELKREESRIIVP
Ga0307477_107501001	3300031753	Hardwood Forest Soil	ADIFYLLVFLYRMGLLRTNGRPHCRRYIEFLRSQFPDAQELKREESRIIVP
Ga0318537_101644031	3300031763	Soil	RSNGRPRSRRFIEFLRGQFPQAEELKREAPRIIVP
Ga0318543_100451752	3300031777	Soil	RMGLLRSNGRPRSRRFIEFLRGQFPQAEELKREAPRIIVP
Ga0318550_105372672	3300031797	Soil	RMGLLRTNGRSRSRRFIEFLRSQFPGTPELQREPSRIIVP
Ga0306921_101639163	3300031912	Soil	LLRANGRPRSRCFIEFLRGQFPGAQELKREESRIIVP
Ga0307479_106394021	3300031962	Hardwood Forest Soil	GLLRTNGRPRSRRFIEFLRGQFPQSPELKHEESRIIVP
Ga0307479_117687292	3300031962	Hardwood Forest Soil	YRMGLLRTNGRPRSRRYIEFLRSQFPEAQELKREESRIIVP
Ga0307479_117844551	3300031962	Hardwood Forest Soil	FLYRMGLLRTNGRSRSRRFIEFLRGQFRQSPELQREESRIIVP
Ga0306922_104485391	3300032001	Soil	GLLRSNGRPRSRRFIEFLRSQFPQAEELKREEPRIIVP
Ga0310911_107305561	3300032035	Soil	LVFVYRMGLLRTNGRPRSRLFIEFLRLQFPQAPELKREESRIIVP
Ga0318505_101153801	3300032060	Soil	MGLLRSNGRPRSRRFIEFLRGQFPQAEELKREAPRIIVP
Ga0318513_105968302	3300032065	Soil	GLLRANGRPRSRRFIEFLHGQFPGAQDLKREESRIIVP
Ga0306924_109805372	3300032076	Soil	LYRMGLLRTNGRPRSRKFIEFLRGQFPGAGELRHEESRIIVP
Ga0371487_0027063_3629_3745	3300033982	Peat Soil	GILRTNGRSRSRRFIEFLRSQFPGAQELKREESRIIVP
Ga0326724_0216304_1016_1123	3300034091	Peat Soil	RTNGRSRSRRFIEFLRSQFPGAQELKREESRIIVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F026960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences