Metagenome / Metatranscriptome Family F025875

Basic Information
Family ID	F025875
Family Type	Metagenome / Metatranscriptome
Number of Sequences	200
Average Sequence Length	43 residues
Representative Sequence	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALG
Number of Associated Samples	176
Number of Associated Scaffolds	200

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.48 %
% of genes near scaffold ends (potentially truncated)	97.00 %
% of genes from short scaffolds (< 2000 bps)	93.50 %
Associated GOLD sequencing projects	170
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (99.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.500 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54. 12222063446 2JGI12270J11330_102076202 3JGI12269J14319_102088172 4JGI12269J14319_102837131 5JGI12698J15209_10092542 6C688J18823_104809172 7Ga0062385_103138212 8Ga0068972_10737951 9Ga0066807_10294431 10Ga0066672_100400855 11Ga0070690_1000422706 12Ga0070709_103772452 13Ga0066687_108694582 14Ga0070734_106405802 15Ga0070735_108606831 16Ga0070732_102840152 17Ga0066700_107504421 18Ga0070717_112095391 19Ga0075019_104233741 20Ga0079221_117849102 21Ga0105245_127716761 22Ga0127491_11206361 23Ga0126319_10799382 24Ga0126318_104029791 25Ga0136449_1005325101 26Ga0136449_1014955121 27Ga0134126_117049552 28Ga0126352_10793792 29Ga0126352_12622192 30Ga0126349_11428642 31Ga0126350_123788542 32Ga0138531_1889212 33Ga0138524_10413551 34Ga0137393_111171432 35Ga0137388_105583541 36Ga0137378_111618451 37Ga0137386_105998181 38Ga0137384_106929891 39Ga0134030_11606212 40Ga0134040_10100762 41Ga0137395_107724421 42Ga0126369_124070761 43Ga0181537_104825451 44Ga0182016_104752632 45Ga0182030_117627832 46Ga0182032_110497351 47Ga0182034_117637512 48Ga0187847_100621094 49Ga0187778_110697772 50Ga0187776_104962802 51Ga0187777_103167901 52Ga0187782_101192831 53Ga0187782_104290232 54Ga0187822_103439722 55Ga0187816_103192371 56Ga0187855_102648962 57Ga0187766_106826722 58Ga0187774_112872931 59Ga0184582_1027401 60Ga0181506_11167111 61Ga0181506_13057612 62Ga0206351_103277101 63Ga0206352_101453092 64Ga0179594_104327741 65Ga0210399_112332611 66Ga0210396_114271552 67Ga0213882_102502921 68Ga0213881_102841292 69Ga0210385_107918852 70Ga0210385_108502992 71Ga0210394_116347482 72Ga0210384_113596342 73Ga0210398_105036271 74Ga0213851_15790122 75Ga0242642_10689951 76Ga0242652_10481892 77Ga0242664_11564332 78Ga0242669_10830091 79Ga0242668_10863272 80Ga0222756_10350021 81Ga0242673_10378881 82Ga0242673_10424411 83Ga0242673_11002963 84Ga0242675_10539301 85Ga0242657_10115144 86Ga0242654_101253671 87Ga0179589_103769122 88Ga0247666_10066785 89Ga0208190_10601921 90Ga0207696_11811072 91Ga0207663_100403591 92Ga0207664_117681631 93Ga0207664_118212142 94Ga0257164_10615352 95Ga0207779_10434501 96Ga0208860_10051811 97Ga0208237_10488911 98Ga0208605_1012731 99Ga0208604_10040841 100Ga0209178_11523602 101Ga0209112_102030952 102Ga0209166_102830302 103Ga0209169_106643282 104Ga0209624_102769672 105Ga0209415_109772862 106Ga0209526_106777651 107Ga0302232_101790541 108Ga0302232_104012271 109Ga0222748_10570931 110Ga0302283_11637682 111Ga0311339_103553804 112Ga0311339_108471621 113Ga0311370_110629342 114Ga0210284_17620021 115Ga0210274_13878421 116Ga0210274_14501392 117Ga0210274_15347391 118Ga0210274_15896222 119Ga0210274_16526671 120Ga0210252_109585952 121Ga0210270_15904682 122Ga0210262_10147682 123Ga0210255_102190041 124Ga0210278_11169202 125Ga0210251_111413002 126Ga0210291_102997731 127Ga0210269_103210432 128Ga0265462_110267992 129Ga0265460_114338582 130Ga0265459_138372692 131Ga0265777_1025171 132Ga0265737_1105771 133Ga0075375_118010731 134Ga0075371_118178181 135Ga0170834_1067987033 136Ga0308197_103860762 137Ga0170823_131632441 138Ga0170824_1199515711 139Ga0170824_1261276591 140Ga0302307_101764732 141Ga0302325_112884402 142Ga0302325_125932442 143Ga0318516_100897591 144Ga0318528_102226691 145Ga0318515_106954571 146Ga0310915_103537882 147Ga0318574_109339672 148Ga0318572_107777871 149Ga0310686_1029351161 150Ga0310686_1141178851 151Ga0318496_100480865 152Ga0307476_104012762 153Ga0306917_103837662 154Ga0318500_103922451 155Ga0318501_102453411 156Ga0318502_101727733 157Ga0318502_109832171 158Ga0318492_108061652 159Ga0318546_113381611 160Ga0318547_102534772 161Ga0318548_103586111 162Ga0318523_101725001 163Ga0307478_117138861 164Ga0310917_100648705 165Ga0310917_106746132 166Ga0318517_100527074 167Ga0318495_102790321 168Ga0316049_1170132 169Ga0318536_104857072 170Ga0306923_108699772 171Ga0308174_106494072 172Ga0310912_107002671 173Ga0310913_102428933 174Ga0310909_102376541 175Ga0306922_119300281 176Ga0318562_104228372 177Ga0318563_105061862 178Ga0318563_107205851 179Ga0310911_104674241 180Ga0318559_102602361 181Ga0318556_100777784 182Ga0318558_105351081 183Ga0318514_100289435 184Ga0318524_104174241 185Ga0318553_100352531 186Ga0326631_1014902 187Ga0306924_100585746 188Ga0306924_110901132 189Ga0318525_106984341 190Ga0318577_100672931 191Ga0307470_109602472 192Ga0306920_1003655215 193Ga0348332_143675791 194Ga0335070_116113201 195Ga0335069_103590181 196Ga0335069_109516431 197Ga0316212_10488292 198Ga0370515_0173055_2_112 199Ga0370515_0372928_3_143 200Ga0370514_200532_3_113
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54. 12222063446 2JGI12698J15209_10092542 3C688J18823_104809172 4Ga0066687_108694582 5Ga0070735_108606831 6Ga0134126_117049552 7Ga0126352_10793792 8Ga0138531_1889212 9Ga0182030_117627832 10Ga0187847_100621094 11Ga0222748_10570931 12Ga0265460_114338582 13Ga0316212_10488292
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0308197_103860762 2C688J18823_104809172 3Ga0070735_108606831 4Ga0134126_117049552 5Ga0134030_11606212 6Ga0182030_117627832 7Ga0187847_100621094 8Ga0187822_103439722 9Ga0187855_102648962 10Ga0181506_11167111 11Ga0210396_114271552 12Ga0210385_108502992 13Ga0207779_10434501 14Ga0209169_106643282 15Ga0222748_10570931 16Ga0302283_11637682 17Ga0210284_17620021 18Ga0210274_16526671 19Ga0210278_11169202 20Ga0265460_114338582 21Ga0170834_1067987033 22Ga0170824_1199515711 23Ga0318574_109339672 24Ga0318572_107777871 25Ga0318546_113381611 26Ga0307478_117138861 27Ga0316212_10488292
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.2.0: automated matches	d4z9ha_	4z9h	0.88156
f.63.1.1: Claudin	d3x29a_	3x29	0.87031
a.25.1.7: MiaE-like	d6zmbb_	6zmb	0.86884
a.25.1.0: automated matches	d5uwza_	5uwz	0.86173
a.25.1.1: Ferritin	d3pwfa1	3pwf	0.85994

Pfam ID	Name	% Frequency in 200 Family Scaffolds
PF05103	DivIVA	21.00
PF04472	SepF	3.50
PF02325	YGGT	1.50
PF01168	Ala_racemase_N	1.00
PF01738	DLH	0.50

COG ID	Name	Functional Category	% Frequency in 200 Family Scaffolds
COG1799	Cell division protein SepF/YlmF, interacts with FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	3.50
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	1.50

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.00 %
Unclassified	root	N/A	1.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.00 %
Unclassified	root	N/A	1.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.00 %
Unclassified	root	N/A	1.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	98.00 %
Unclassified	root	N/A	1.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	98.00 %
Unclassified	root	N/A	1.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	94.50 %
Unclassified	root	N/A	1.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.50 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	8.00 %
Unclassified	root	N/A	1.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.50 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.50 %
Unclassified	root	N/A	1.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.50 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.50 %
Unclassified	root	N/A	1.00 %

Scaffold	Taxonomy	Length	IMG/M Link
2209111022\|2221217847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300000567\|JGI12270J11330_10207620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300001356\|JGI12269J14319_10208817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300001356\|JGI12269J14319_10283713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300001461\|JGI12698J15209_1009254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300001686\|C688J18823_10480917	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300004080\|Ga0062385_10313821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	904	Open in IMG/M
3300004478\|Ga0068972_1073795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1662	Open in IMG/M
3300005161\|Ga0066807_1029443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300005167\|Ga0066672_10040085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.50%
Host-Associated	Host-Associated	1.50%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	6.50%
Plants	Host-Associated → Plants	1.50%
Terrestrial	Environmental → Terrestrial	92.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	6.00%
Peat	Environmental → Terrestrial → Peat	4.50%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.00%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.00%
Roots	Host-Associated → Plants → Roots	0.50%
Sediment	Environmental → Aquatic → Sediment	0.50%
Soil	Environmental → Terrestrial → Soil	86.00%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.00%
Loam	Environmental → Terrestrial → Soil → Loam	8.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.50%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.50%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.50%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.50%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.00%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.50%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.00%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.00%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.50%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.50%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.50%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.50%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.00%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.50%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001461	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 176 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222063446	2209111022	Grass Soil	VIRFSAFLVVVAVGLLVAGVVTSKLWLVYIAIGVSGVAL
JGI12270J11330_102076202	3300000567	Peatlands Soil	VIRFSAFLVVVAVGSLVAGVVTSKLLLVYIAIGVSGAALLA
JGI12269J14319_102088172	3300001356	Peatlands Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGAALL
JGI12269J14319_102837131	3300001356	Peatlands Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGVGAAVX
JGI12698J15209_10092542	3300001461	Forest Soil	VIRFSASLVVVGVGLLIAGGVTSKLLLIYIAIGVSA
C688J18823_104809172	3300001686	Soil	VIRLSAFLVVVAVGTLVGGVVTSKLSLVYTAIGVSGLALLALGIGAALNWR
Ga0062385_103138212	3300004080	Bog Forest Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGVGAAV
Ga0068972_10737951	3300004478	Peatlands Soil	VIRFSAFLVAAALGLLVAGVVTSRLILVYVAIGVSGVALLA
Ga0066807_10294431	3300005161	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALL
Ga0066672_100400855	3300005167	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGIGAA
Ga0070690_1000422706	3300005330	Switchgrass Rhizosphere	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLA
Ga0070709_103772452	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VIRFSAFLVVAAVGTLVGGVVTSKLLLVYIAIGVSGLALLALG
Ga0066687_108694582	3300005454	Soil	VIRFSAFLVVVAVGLLLAGVVTSKLLLVYLAIGVSGAALLALTAAAVLHR
Ga0070734_106405802	3300005533	Surface Soil	VIRFSAFLVAVAVGLLVAGVVTSKLALVYVAIGVSG
Ga0070735_108606831	3300005534	Surface Soil	VIRFSAALVAVAIGVLVAGVVTSRLLFVYVAIGVSAAALIALAI
Ga0070732_102840152	3300005542	Surface Soil	VIRFSAFLVVVALGLLVAGVVMSRLTLVYVAIGVS
Ga0066700_107504421	3300005559	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYVAIGVSGAALLALGIGA
Ga0070717_112095391	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VIRFSAFLVVAAVGTLVAGVVTSKLLLVYIAIGVSGLAL
Ga0075019_104233741	3300006086	Watersheds	VIRFSAFLVVVAVGLLVAGVVTSELLLVYIAIGVSGVALL
Ga0079221_117849102	3300006804	Agricultural Soil	VIRFSAFLVVAAVGTLVAGVVTSKLLLVYIAIGVSGLALLALGAGAAVHWR
Ga0105245_127716761	3300009098	Miscanthus Rhizosphere	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGV
Ga0127491_11206361	3300010111	Grasslands Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYVAIGVSGVALLALGV
Ga0126319_10799382	3300010147	Soil	VIRFSAFLVVVAVGLLVAGVVTSQLLLVYIAIGVSGVALLALGAGA
Ga0126318_104029791	3300010152	Soil	VIRISAFLVVVAVGLLVAGVVTSKLLFVYIAIGVSGVAL
Ga0136449_1005325101	3300010379	Peatlands Soil	VIVFSAFLVVVAVGMLVAGVVTSKLWLVYLAIGVSGVSLLALALGA
Ga0136449_1014955121	3300010379	Peatlands Soil	VIRFSAFLVVAAVGLLIAGVVTSKLLLVYIAIGVSGAALLALGIGA
Ga0134126_117049552	3300010396	Terrestrial Soil	VIRFSAFLVVAAVGTLIAGVVTSKLLLVYIAISVSGLALLALGAG
Ga0126352_10793792	3300010859	Boreal Forest Soil	VVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGIGAVVK
Ga0126352_12622192	3300010859	Boreal Forest Soil	VIRFSAFLVAVAIGLLVAGVVTSRLTLVYVAIGVSGVA
Ga0126349_11428642	3300010861	Boreal Forest Soil	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYVAIGGSGVALLALAVGALVK
Ga0126350_123788542	3300010880	Boreal Forest Soil	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYLAIGVSGVALLALGIGA
Ga0138531_1889212	3300011053	Peatlands Soil	VIRFSAFLVAAALGLLVAGVVTSRLILVYVAIGVSGVALLALGAGALIK
Ga0138524_10413551	3300011066	Peatlands Soil	VIRFSAFLVVVAVGSLVAGVVTSKLLLVYIAIGVSG
Ga0137393_111171432	3300011271	Vadose Zone Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYVAIGVSGAAL
Ga0137388_105583541	3300012189	Vadose Zone Soil	VIRFSAFLVVVAVGLLVAGVVTSKLGLVYIAIGVSGVAL
Ga0137378_111618451	3300012210	Vadose Zone Soil	VIRFSALLVVGAVGLLVAGVVTSKLLLVYLAIGVSGVALLALGVGA
Ga0137386_105998181	3300012351	Vadose Zone Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVAL
Ga0137384_106929891	3300012357	Vadose Zone Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGIGAAVNWR
Ga0134030_11606212	3300012387	Grasslands Soil	VIRFSAFLVVAAVGTLVAGVVTSKLLLVYIAIGVSAQRC
Ga0134040_10100762	3300012389	Grasslands Soil	VIRFSAFLVAAAVGTLVAGVVTSKLLLVYIAIGVSGVALLALGVGAAV
Ga0137395_107724421	3300012917	Vadose Zone Soil	VIRFSAFLVAVAVGLLVAGVVTSKLGLVYLAIGVSGVALLA
Ga0126369_124070761	3300012971	Tropical Forest Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGLSGVALLALGIGAAVN
Ga0181537_104825451	3300014201	Bog	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYLAIGISG
Ga0182016_104752632	3300014493	Bog	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYLAIAVSGVALLA
Ga0182030_117627832	3300014838	Bog	VIRFSASLVVIAMGLLVAGAVASNLLLVYIAIAMSAVT
Ga0182032_110497351	3300016357	Soil	VIRFSAFLVVVAVGLLVAGVVTSRLLLVYIAIGVSG
Ga0182034_117637512	3300016371	Soil	VIRFSAFLVVIAVGLLIAGVVTSKLLLVYIAIGVSGLALL
Ga0187847_100621094	3300017948	Peatland	VIRFSAFLVVVAVGILIAGGITSRLLLVYIEIALSAVELVFL
Ga0187778_110697772	3300017961	Tropical Peatland	VIRFSALLVVVALGLLVAGVVTSKLMVVYVAIGVSGIAL
Ga0187776_104962802	3300017966	Tropical Peatland	LIRFSAFLVVVAVGLLVAGVVTSRLLLVYIAIGVSGAALLALGAG
Ga0187777_103167901	3300017974	Tropical Peatland	VIRFSAFLVVVAVGLLVAGVLTSRLLLVYIAIGVSGAALLALGAGAL
Ga0187782_101192831	3300017975	Tropical Peatland	VIRFSAFLVAVAVGLLVAGVVTSKLPLVYIAIGVSGVALLVLGV
Ga0187782_104290232	3300017975	Tropical Peatland	VIWFSAFLVAVAVGLLVVGVVTSKLLLVYIAIGVSGAALLALGAGAVFK
Ga0187822_103439722	3300017994	Freshwater Sediment	VIRFSALLVAVALGLLVAGVVTSKLMLVYVAIGVSGIALLALGVGAL
Ga0187816_103192371	3300017995	Freshwater Sediment	VIRFSAFLVAAALGLLVAGVVTSRLMLVYVAIGVSGV
Ga0187855_102648962	3300018038	Peatland	VIRFSAFLVVVAFGLLIAGVHTSKLLLVYLAIGVSGVALL
Ga0187766_106826722	3300018058	Tropical Peatland	VIRFSAFLVAVAVGLLVAGVVTSRLLLVYIAIGVSGVALLVLGVGALLK
Ga0187774_112872931	3300018089	Tropical Peatland	VIRFSAFLVVAAVGLLIAGVVTSKLLLVYIAIGVSGVALLALGIGAAVHW
Ga0184582_1027401	3300019164	Soil	VIRFSAFLVVVAVGLLVAGLVTSKLVLVYIAIGVSGVALLALGIG
Ga0181506_11167111	3300019260	Peatland	VIRFSAFLVAVALGLLVAGVVMSKLVLVYLAIGISGVALLALGAGA
Ga0181506_13057612	3300019260	Peatland	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYLAIGVSGVALLALGVGA
Ga0206351_103277101	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYIAIGVSGV
Ga0206352_101453092	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYIAIGVSGVA
Ga0179594_104327741	3300020170	Vadose Zone Soil	VIRFSAFLVVAAVGTLIAGVVTSKLLLVYIAIGVSGLAL
Ga0210399_112332611	3300020581	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYLAIGVSGVALLALG
Ga0210396_114271552	3300021180	Soil	VIRFSAFLVVVAVGLLLAGVITSELVLVYVAIGVSGVA
Ga0213882_102502921	3300021362	Exposed Rock	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGAALVALG
Ga0213881_102841292	3300021374	Exposed Rock	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALAI
Ga0210385_107918852	3300021402	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGIGAAVN
Ga0210385_108502992	3300021402	Soil	VIRFSASLVVVAVGLLIAGVVTSRLMLVYIAIGVSALALLALGI
Ga0210394_116347482	3300021420	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLMLVYIAIGVSGVALLALG
Ga0210384_113596342	3300021432	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYIAIGVSGVALLALGIGAAV
Ga0210398_105036271	3300021477	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYLAIGVSGVALLALGIGAAVK
Ga0213851_15790122	3300021860	Watersheds	VIRFSAFLVVVSVGLLVVGVVTSKLLLVYIAIGVSGVALLAL
Ga0242642_10689951	3300022504	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLMLVYIAIGVSG
Ga0242652_10481892	3300022510	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLMLVYVAIGVSGVALLALAVG
Ga0242664_11564332	3300022527	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGIGA
Ga0242669_10830091	3300022528	Soil	VIRFSAFLVAVALGLLVAGVVTSKLLLVYLAIGISGV
Ga0242668_10863272	3300022529	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYLAIGVSGVALLALGVG
Ga0222756_10350021	3300022709	Soil	VIVFSAFLVVVAVVLLVAGAVTSKLWLVYLAIGVSGVSLLALAL
Ga0242673_10378881	3300022716	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYLAIGVSGVALLALGIGA
Ga0242673_10424411	3300022716	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYIAIGVSGVALLALGIGA
Ga0242673_11002963	3300022716	Soil	VIRFSAFLVAVAVGLLVAGVVTSRLTLVYVAIGVSGVA
Ga0242675_10539301	3300022718	Soil	VIRFSAALVAVAVGVLVAGVVTSRLLFVYVAIGVSAAALVALAI
Ga0242657_10115144	3300022722	Soil	VIRFSALLVAVAVGLLVAGVVTSKLMLVYVAIAVSGVALL
Ga0242654_101253671	3300022726	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLMLVYIAIGVSGVALLALGIGAAVN
Ga0179589_103769122	3300024288	Vadose Zone Soil	VIRFSAFLVVVAVGLLVAGVVTSELLLVYIAIGVSGV
Ga0247666_10066785	3300024323	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGVGAAVNWR
Ga0208190_10601921	3300025473	Peatland	VIRFSAFLVVVAVGVLIAGGITSKLLLVYIAIALSAV
Ga0207696_11811072	3300025711	Switchgrass Rhizosphere	VIRFSALLVVVAVGLLVAGVVTSKLLLVYIAIGVSG
Ga0207663_100403591	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGVGAA
Ga0207664_117681631	3300025929	Agricultural Soil	VIRFSALLVAVAVGLLVAGVVTSKLALVYVAIGVSGVALLAL
Ga0207664_118212142	3300025929	Agricultural Soil	VIRFSAFLVVAAVGTLVAGVVTSKLLLVYIAIGVSGLALLALGAGAAVH
Ga0257164_10615352	3300026497	Soil	VIRFSAFLVVVAVGLLVAGVVTSELLLVYIAIGVSGVALLALGVG
Ga0207779_10434501	3300026928	Tropical Forest Soil	VIRFSAFLVVAAIGLLVAGVVTSRLLLVYIAIGVSAAALLALGAGALL
Ga0208860_10051811	3300027076	Forest Soil	VIRFSAFLVVVALGLLVAGVVTSRLTLVYVAIGVSG
Ga0208237_10488911	3300027080	Forest Soil	VIRFSAFLVAVALGLLVAGVVTSKLLLVYIAIGVSGVALLALGV
Ga0208605_1012731	3300027087	Forest Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLAL
Ga0208604_10040841	3300027090	Forest Soil	VIRFSAFLVVVAVGLLVAGVVTSKLVLVYVAIGVSGVALLA
Ga0209178_11523602	3300027725	Agricultural Soil	VIRFSAFLVVVAVGVLVAGVVTSKLLLVYIAIGVSGVALLALGIGA
Ga0209112_102030952	3300027817	Forest Soil	VIRFSASLVVVGVGLLIAGGVTSKLLLIYIAIGVSAL
Ga0209166_102830302	3300027857	Surface Soil	VIRFSALLVAVAVGLLVAGVVTSKLALVYVAIGVSGVAL
Ga0209169_106643282	3300027879	Soil	VIRFSAFLVAVAVGLLVAGVVTSRLTLVYVAIGVSGVALLALAIGALIK
Ga0209624_102769672	3300027895	Forest Soil	VIRFSAFLVAVAVGLLVAGVVTSKLMLVYVAIGVSGV
Ga0209415_109772862	3300027905	Peatlands Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGVGA
Ga0209526_106777651	3300028047	Forest Soil	VIRFSAFLVVVAVGLLVAGVVTSKLALVYIAIGVSGMALLAL
Ga0302232_101790541	3300028789	Palsa	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYLAIGISGVALLALGVGAA
Ga0302232_104012271	3300028789	Palsa	VIRFSAFLVVVAVGSLVAGVVTSKLLLVYLAIGVSGV
Ga0222748_10570931	3300029701	Soil	VIVFSAFLVVVAVVLLVAGAVTSKLWLVYLAIGVSGVSLLALALGAI
Ga0302283_11637682	3300029994	Fen	VIRFSAFLVAVAVGILVAGGITSKLLLVYIAIAVSAVALLF
Ga0311339_103553804	3300029999	Palsa	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYLAIGVSGVALLA
Ga0311339_108471621	3300029999	Palsa	VIRFSAFLVAVAVGILIAGGITSKLLLVYIAIALSAVALVF
Ga0311370_110629342	3300030503	Palsa	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYLAIGVSGVALL
Ga0210284_17620021	3300030529	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLALVYVAIAVSGVALVALGRRERVE
Ga0210274_13878421	3300030531	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLTLVYVAIGASGVALL
Ga0210274_14501392	3300030531	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLMFVYLAIGVSGVALLALGVGAAVK
Ga0210274_15347391	3300030531	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYVAIGVSGVALLALGIGAAVKW
Ga0210274_15896222	3300030531	Soil	VIRFSAFLVAVALGLLVAGVVTSKLMLVYVAIGVSGVAL
Ga0210274_16526671	3300030531	Soil	VIRFSAFLVVVALGLLVAGVVTSRLALVYVAIGASGVALKKKRRK
Ga0210252_109585952	3300030548	Soil	VIRFSALLVAVAVGLLVAGVVTSKLTLVYVAIGVSG
Ga0210270_15904682	3300030581	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLMFVYLAIGVSGVALLALGVGAAVKW
Ga0210262_10147682	3300030583	Soil	VIRFSAFLVVAAVGLLVAGVVTSKLLLVYLAIGVSGVALLALGIGAK
Ga0210255_102190041	3300030589	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLSLVYIAIGVSGVALLSLGIGAAVKWR
Ga0210278_11169202	3300030596	Soil	VILFSAFLVAAATVLLVAGVVTSSLALVYIAIGVSGFALLALVAGELKK
Ga0210251_111413002	3300030624	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGIGAKKRQNKN
Ga0210291_102997731	3300030626	Soil	VIRFSAFLVAVAVGLLVAGIVTSRLMLVYAAIGVSGVALLALAIGALIK
Ga0210269_103210432	3300030627	Soil	VIRFSAFLVAVALGLLVAGVVTSKLLLVYLAIGISG
Ga0265462_110267992	3300030738	Soil	VIRFSAFLVVAAVGLLVAGVVTSKLLLVYLAIGVSGVA
Ga0265460_114338582	3300030740	Soil	VIRFSAFLVAVAIGLLVAGVVISRLALVYVAIGVSGVALREKGNIKQKSIM
Ga0265459_138372692	3300030741	Soil	VIRFSAFLVAAALGLLVAGAVTSKLMLVYVAIGVSGVALLALGTGALVKRKELFG
Ga0265777_1025171	3300030877	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLSLGIGAAVKW
Ga0265737_1105771	3300030941	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYLAIGVSGVALLALGVGA
Ga0075375_118010731	3300030971	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLVLVYIAIGVSGK
Ga0075371_118178181	3300030974	Soil	VIVFSAFLVVVAVGMLVAGVVTSKLWLVYLAIGVS
Ga0170834_1067987033	3300031057	Forest Soil	VIRFSAFLVVAAVGTLIAGVVTSKLLLVYIAIGVSGRNSRL
Ga0308197_103860762	3300031093	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALG
Ga0170823_131632441	3300031128	Forest Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGI
Ga0170824_1199515711	3300031231	Forest Soil	VIRFSAFLVVAAVGTLIAGVVTSKLLLVYIAIGVSGLGMKKW
Ga0170824_1261276591	3300031231	Forest Soil	VIRFSAFLVVVAVGVLVAGVVTSKLLLVYIAIGVSGVALLALG
Ga0302307_101764732	3300031233	Palsa	VIRFSAFLVVVAVGLLVAGVVTSKLTLVYVAIAVSGVA
Ga0302325_112884402	3300031234	Palsa	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYLAIGVSGVALLALGVGAAVKW
Ga0302325_125932442	3300031234	Palsa	VIRFSAFLVVVAVGLLGAGVVTSKLLLVYLAIGVSGVALLALG
Ga0318516_100897591	3300031543	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVS
Ga0318528_102226691	3300031561	Soil	VIRFSAFLVVVAAGLLVAGVVTSKLMLVYVAIGVSGVALLALGAGALLK
Ga0318515_106954571	3300031572	Soil	VIRFSAFLVVIAVGLLIAGVVTSKLLLVYVAIGVSGLALLALGVGAA
Ga0310915_103537882	3300031573	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVA
Ga0318574_109339672	3300031680	Soil	VIRFSAFLVAAAVGLLIAGVVTSKLLLVYLAIGASG
Ga0318572_107777871	3300031681	Soil	VIRFSAFLVVIAVGLLIAGVVTSKLLLVYVAIGVSGLALL
Ga0310686_1029351161	3300031708	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLSL
Ga0310686_1141178851	3300031708	Soil	VIRFSAFLVVVALGLLVAGVVTSRLALVYVAIGVSGVALLALG
Ga0318496_100480865	3300031713	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVSGVALLALA
Ga0307476_104012762	3300031715	Hardwood Forest Soil	VIRFSALLVAVAVGLLVAGVVTSKLALVYVAIGVSGVA
Ga0306917_103837662	3300031719	Soil	VIRFSAFLVVVAAGLLVAGVVTSKLLLVYIAIGVSAGALLALGAGALLKRREL
Ga0318500_103922451	3300031724	Soil	VIRFSAFLVVVAVGLLIAGVVTSKLLFVYIAIGVSGVALLALGVG
Ga0318501_102453411	3300031736	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVSGVALLALG
Ga0318502_101727733	3300031747	Soil	VIRFSAFLVVAATGLLVAGVVTSRLVLVYIAIGVSAAALLALGV
Ga0318502_109832171	3300031747	Soil	VIRFSAFLVAVALGLLVAGVVTSKLMLVYVAIGVSGVALLA
Ga0318492_108061652	3300031748	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVSGVALLA
Ga0318546_113381611	3300031771	Soil	VIRFSAFLVTIAVGLLVAGVITSKLLLVYLAIGVSGAALLT
Ga0318547_102534772	3300031781	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVSGVALLALGVGALLK
Ga0318548_103586111	3300031793	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVS
Ga0318523_101725001	3300031798	Soil	VIRFSAFLVVIAVGLLIAGVVTSKLLLVYVAIGVSGLALLALGAGAAVN
Ga0307478_117138861	3300031823	Hardwood Forest Soil	VIRFSASLVVVGVGLLIAGGVTSKLLLIYIAIGVSALALL
Ga0310917_100648705	3300031833	Soil	VIRFSAFLVVVAAGLLVAGVVTSKLLLVYVAIGVSGVALL
Ga0310917_106746132	3300031833	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVSGVAL
Ga0318517_100527074	3300031835	Soil	VIRFSAFLVVVAAGLLVAGVVTSKLLLVYVAIGVSGVALLALGAGALLK
Ga0318495_102790321	3300031860	Soil	VIRFSAFLVVAATGLLVAGVVTSRLVLVYIAIGVSAAALLALGVGALLKRRD
Ga0316049_1170132	3300031866	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYLAIGVSGVALLAL
Ga0318536_104857072	3300031893	Soil	VIRFSAFLVVIAVGLLIAGVVTSKLLLVYVAIGVSGLALLA
Ga0306923_108699772	3300031910	Soil	VIRFSAFLVVAATGLLVAGVVTSRLVLVYIAIGVSAAALLALGVGALLKR
Ga0308174_106494072	3300031939	Soil	VIRFSAFLVVAAVGTLVAGVVTSKLLLVYIAIGVSGLAQLALGAGAAFHWRE
Ga0310912_107002671	3300031941	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGIG
Ga0310913_102428933	3300031945	Soil	VIRFSAFLVVVAAGLLVAGVVTSKLLLVYVAIGVSGVALLALGAGALLKRSE
Ga0310909_102376541	3300031947	Soil	VIRFSAFLVVVAAGLLVAGVVTSKLLLVYVAIGVSGVA
Ga0306922_119300281	3300032001	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVSGVALLALAVG
Ga0318562_104228372	3300032008	Soil	VIRFSAFLVVAATGLLVAGVVTSRLVLVYIAIGVSAAALLALG
Ga0318563_105061862	3300032009	Soil	VIRFSAFLVVVAVGLLIAGVVTSKLLLVYLAIGVSGV
Ga0318563_107205851	3300032009	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYIAIGVSGVALLALGVGALLK
Ga0310911_104674241	3300032035	Soil	VIVFSAFLVAVAVGLLVAGVVTSKLLLVYIAIGVSGVALL
Ga0318559_102602361	3300032039	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVSGVALLAL
Ga0318556_100777784	3300032043	Soil	VIRFSAFLVAVALGLLVAGVVTSKLMLVYIAIGVSGVA
Ga0318558_105351081	3300032044	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGLG
Ga0318514_100289435	3300032066	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGL
Ga0318524_104174241	3300032067	Soil	VIRFSAFLVVVAVGLLVAGVVTSKLLLVYIAIGVSGVALLALGIGAAVNW
Ga0318553_100352531	3300032068	Soil	VIRFSAFLVVVAAGLLVAGVVTSKLMLVYVAIGVSGVALLA
Ga0326631_1014902	3300032072	Soil	VIRFSAFLVAVAVGLLVAGVVTSKLLLVYIAIGVSGVALLSLGIGA
Ga0306924_100585746	3300032076	Soil	VIRFSAFLVVVAAGLLVAGVVTSKLMLVYVAIGVS
Ga0306924_110901132	3300032076	Soil	VIRFSAFLVTIAVGLLVAGVITSKLLLVYLAIGVSGAALL
Ga0318525_106984341	3300032089	Soil	VIRFSAFLVAVALGLLVAGVVTSKLMLVYVAIGVSGIALLALGAGALLK
Ga0318577_100672931	3300032091	Soil	VIRFSAFLVAVALGLLVAGVVTSKLTLVYVAIGVSGVALLALGV
Ga0307470_109602472	3300032174	Hardwood Forest Soil	VIRFSALLVVVAVGLLVAGVVTSKLLLVYIAIGVS
Ga0306920_1003655215	3300032261	Soil	VIRFSACLVVAAVGLLIAGVVTSKLLLVYLAIGVSGVALLALGIGAAV
Ga0348332_143675791	3300032515	Plant Litter	VIRFSAFLVAVAVGLLVAGVITSKLLLVYLAIGVSGVALLALGIGAAVK
Ga0335070_116113201	3300032829	Soil	VIRFSAFLVVAAVGLLSAGVVTSKLVLVYIAIGVSGVALLALGVGVAVNWR
Ga0335069_103590181	3300032893	Soil	VIRFSAFLVVVAVGLLIAGVVTSKLLFVYIAIGVSGVAL
Ga0335069_109516431	3300032893	Soil	VIRFSAFLVVIAVGLLIAGVVTSKLLLVYVAIGVSGVALLALGLGA
Ga0316212_10488292	3300033547	Roots	VIRFSAAFVAVAAVLLVAGIITSDLKLVYVAIGVSS
Ga0370515_0173055_2_112	3300034163	Untreated Peat Soil	MIRFSAFLVAVAVGLLVAGVVTSKLLLVYLAIGVSGV
Ga0370515_0372928_3_143	3300034163	Untreated Peat Soil	VIRFSAFLVVVAVGLLVAGVVTSKLMLVYLAIGVSGVALLALGVGAA
Ga0370514_200532_3_113	3300034199	Untreated Peat Soil	VIRFSAFLVVVAVGLLVAGVVTSKLTLVYVAIAVSGV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F025875

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences