Metagenome / Metatranscriptome Family F023432

Basic Information
Family ID	F023432
Family Type	Metagenome / Metatranscriptome
Number of Sequences	210
Average Sequence Length	49 residues
Representative Sequence	MTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDRMGGSLA
Number of Associated Samples	171
Number of Associated Scaffolds	210

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.55 %
% of genes near scaffold ends (potentially truncated)	96.67 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	158
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (71.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.095 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.095 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1JGI1027J12803_1046053733 2JGI1027J12803_1079254032 3JGI12637J13337_10137291 4JGI24752J21851_10174951 5Ga0066679_105055571 6Ga0066679_107516082 7Ga0066688_100430664 8Ga0066684_105592401 9Ga0066671_106149052 10Ga0066675_102567722 11Ga0066388_1005947693 12Ga0066388_1034763431 13Ga0066388_1064987541 14Ga0070689_1016806851 15Ga0070667_1015056482 16Ga0070708_1004524172 17Ga0070708_1010129901 18Ga0066687_106502551 19Ga0070662_1001775361 20Ga0068867_1005660001 21Ga0070696_1006499492 22Ga0066701_103010681 23Ga0066692_106569022 24Ga0066700_103500192 25Ga0066670_103367641 26Ga0066699_102699252 27Ga0066699_105357501 28Ga0066693_100652701 29Ga0066702_102244672 30Ga0066706_105104922 31Ga0066706_113799122 32Ga0070762_109903921 33Ga0068856_1021441171 34Ga0075284_10705872 35Ga0070766_106958861 36Ga0066794_100508452 37Ga0070717_106737372 38Ga0075028_1006653791 39Ga0097691_10782791 40Ga0075019_102664921 41Ga0075015_1008981851 42Ga0075030_1001492341 43Ga0075030_1009105342 44Ga0075018_105094062 45Ga0070716_1001928661 46Ga0070765_1008376062 47Ga0075021_101158291 48Ga0068871_1004516052 49Ga0066665_101500141 50Ga0075433_117814861 51Ga0099794_100308204 52Ga0099829_106149521 53Ga0099829_108952812 54Ga0099828_108790122 55Ga0099792_103113881 56Ga0116120_10514491 57Ga0116223_103192521 58Ga0126384_103977212 59Ga0126373_102509001 60Ga0126373_107700002 61Ga0126373_108918042 62Ga0126373_118983563 63Ga0134067_102660972 64Ga0134071_104347482 65Ga0126370_102391393 66Ga0126370_105850551 67Ga0126378_129577942 68Ga0126379_115198212 69Ga0126381_1017266701 70Ga0134124_130545711 71Ga0137392_108747241 72Ga0137392_115186211 73Ga0137391_107147251 74Ga0137391_111537591 75Ga0137391_112352562 76Ga0137393_100083446 77Ga0137393_101456441 78Ga0137393_102752983 79Ga0137393_104923102 80Ga0137393_117908231 81Ga0137388_107239211 82Ga0137388_107253511 83Ga0137388_111325222 84Ga0137363_103787401 85Ga0137362_107381081 86Ga0137377_116780421 87Ga0137370_110235991 88Ga0137387_102718831 89Ga0137386_110776941 90Ga0137367_105208741 91Ga0137361_106484811 92Ga0137361_110183162 93Ga0137390_103839931 94Ga0137395_104237821 95Ga0137396_1000020917 96Ga0137419_102426822 97Ga0137404_123350231 98Ga0164300_111178421 99Ga0153916_108478201 100Ga0134077_104743191 101Ga0164304_105429352 102Ga0157371_100161251 103Ga0132258_133027361 104Ga0182036_104934092 105Ga0182035_106417942 106Ga0187853_103175612 107Ga0187779_102637372 108Ga0187804_103958281 109Ga0187784_101597193 110Ga0187772_114411552 111Ga0066662_126961861 112Ga0066669_107388822 113Ga0066669_112979272 114Ga0066669_119855631 115Ga0193723_10197191 116Ga0193713_10836672 117Ga0179594_103376232 118Ga0210399_107497941 119Ga0210404_104814992 120Ga0210405_102250001 121Ga0210408_102418301 122Ga0210408_103240922 123Ga0210408_107187291 124Ga0210389_114402501 125Ga0210402_106049132 126Ga0210402_106474522 127Ga0210402_119309321 128Ga0210409_103612101 129Ga0242655_103198482 130Ga0193714_10608921 131Ga0247794_101731381 132Ga0207699_100914001 133Ga0207699_103339262 134Ga0207663_114618032 135Ga0207687_117974371 136Ga0207700_102206071 137Ga0207706_100245434 138Ga0207670_100588111 139Ga0207651_114080292 140Ga0207641_124190262 141Ga0209234_10261163 142Ga0209236_12702812 143Ga0209265_11849471 144Ga0209761_10995151 145Ga0209761_11335942 146Ga0209154_10337591 147Ga0209687_11247772 148Ga0209801_12068942 149Ga0209267_10275531 150Ga0209377_12330522 151Ga0257177_10871992 152Ga0257160_10312061 153Ga0209807_11515462 154Ga0207509_1061292 155Ga0207779_10311061 156Ga0207484_1013801 157Ga0208199_10715761 158Ga0209220_11313421 159Ga0209733_10466372 160Ga0209106_11049042 161Ga0209388_11200121 162Ga0209689_10149724 163Ga0209448_101247872 164Ga0209701_103405972 165Ga0209283_100773773 166Ga0209590_105819062 167Ga0209068_101633872 168Ga0209488_100446074 169Ga0209006_103620632 170Ga0209698_110238862 171Ga0209168_103071311 172Ga0209526_102061941 173Ga0268264_100984613 174Ga0307504_101111322 175Ga0265324_101129231 176Ga0310037_104635922 177Ga0316363_101707961 178Ga0170819_114846812 179Ga0170818_1125046041 180Ga0265313_102889512 181Ga0310686_1073547198 182Ga0307469_102178053 183Ga0307468_1001898983 184Ga0307475_114492591 185Ga0307473_106165522 186Ga0307473_107285411 187Ga0307473_108279901 188Ga0307473_110128582 189Ga0307473_114196292 190Ga0307478_109957671 191Ga0310917_104232012 192Ga0306921_107080111 193Ga0306921_110758262 194Ga0307479_107540872 195Ga0307479_111802771 196Ga0308176_100389881 197Ga0318562_103034431 198Ga0318505_103733301 199Ga0307470_113851102 200Ga0307471_1009839752 201Ga0306920_1009269451 202Ga0306920_1013287981 203Ga0335085_101396251 204Ga0335079_104894332 205Ga0335079_112165512 206Ga0335078_111837361 207Ga0335084_111901452 208Ga0335077_111689502 209Ga0326726_107932711 210Ga0316624_112637821
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1JGI1027J12803_1046053733 2JGI1027J12803_1079254032 3JGI12637J13337_10137291 4JGI24752J21851_10174951 5Ga0066679_105055571 6Ga0066679_107516082 7Ga0066688_100430664 8Ga0066684_105592401 9Ga0066671_106149052 10Ga0066675_102567722 11Ga0066388_1005947693 12Ga0066388_1034763431 13Ga0066388_1064987541 14Ga0070667_1015056482 15Ga0070696_1006499492 16Ga0066692_106569022 17Ga0066700_103500192 18Ga0066670_103367641 19Ga0066699_102699252 20Ga0066693_100652701 21Ga0066702_102244672 22Ga0066706_113799122 23Ga0070762_109903921 24Ga0075284_10705872 25Ga0070717_106737372 26Ga0075028_1006653791 27Ga0075019_102664921 28Ga0075015_1008981851 29Ga0075030_1001492341 30Ga0075018_105094062 31Ga0075021_101158291 32Ga0099829_108952812 33Ga0099792_103113881 34Ga0116223_103192521 35Ga0126384_103977212 36Ga0126373_107700002 37Ga0134071_104347482 38Ga0126370_102391393 39Ga0126379_115198212 40Ga0134124_130545711 41Ga0137392_115186211 42Ga0137391_107147251 43Ga0137363_103787401 44Ga0137362_107381081 45Ga0137370_110235991 46Ga0137419_102426822 47Ga0164300_111178421 48Ga0153916_108478201 49Ga0164304_105429352 50Ga0132258_133027361 51Ga0182036_104934092 52Ga0182035_106417942 53Ga0187804_103958281 54Ga0187784_101597193 55Ga0187772_114411552 56Ga0066662_126961861 57Ga0066669_119855631 58Ga0193713_10836672 59Ga0210399_107497941 60Ga0210405_102250001 61Ga0210408_102418301 62Ga0210408_103240922 63Ga0210408_107187291 64Ga0210402_106474522 65Ga0247794_101731381 66Ga0207699_100914001 67Ga0207663_114618032 68Ga0209590_105819062 69Ga0209168_103071311 70Ga0307468_1001898983 71Ga0307475_114492591 72Ga0307473_110128582 73Ga0318562_103034431 74Ga0335085_101396251 75Ga0335079_104894332 76Ga0335079_112165512 77Ga0316624_112637821
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0066701_103010681 2JGI1027J12803_1046053733 3Ga0066679_105055571 4Ga0066688_100430664 5Ga0066684_105592401 6Ga0066671_106149052 7Ga0066675_102567722 8Ga0066388_1005947693 9Ga0066388_1034763431 10Ga0066388_1064987541 11Ga0070708_1004524172 12Ga0070696_1006499492 13Ga0066700_103500192 14Ga0066699_102699252 15Ga0066702_102244672 16Ga0066706_105104922 17Ga0066706_113799122 18Ga0075284_10705872 19Ga0070717_106737372 20Ga0075028_1006653791 21Ga0075019_102664921 22Ga0075015_1008981851 23Ga0075030_1001492341 24Ga0099829_108952812 25Ga0099792_103113881 26Ga0116120_10514491 27Ga0126384_103977212 28Ga0126373_108918042 29Ga0126373_118983563 30Ga0134071_104347482 31Ga0126370_105850551 32Ga0126379_115198212 33Ga0126381_1017266701 34Ga0134124_130545711 35Ga0137392_115186211 36Ga0137391_107147251 37Ga0137391_111537591 38Ga0137391_112352562 39Ga0137393_102752983 40Ga0137377_116780421 41Ga0137370_110235991 42Ga0137396_1000020917 43Ga0137419_102426822 44Ga0164300_111178421 45Ga0153916_108478201 46Ga0134077_104743191 47Ga0164304_105429352 48Ga0157371_100161251 49Ga0132258_133027361 50Ga0182036_104934092 51Ga0182035_106417942 52Ga0187779_102637372 53Ga0187804_103958281 54Ga0187784_101597193 55Ga0187772_114411552 56Ga0066662_126961861 57Ga0066669_112979272 58Ga0066669_119855631 59Ga0193723_10197191 60Ga0193713_10836672 61Ga0210399_107497941 62Ga0210405_102250001 63Ga0210408_102418301 64Ga0210408_103240922 65Ga0210408_107187291 66Ga0210402_106049132 67Ga0210402_119309321 68Ga0207699_100914001 69Ga0207706_100245434 70Ga0207641_124190262 71Ga0209236_12702812 72Ga0209807_11515462 73Ga0207509_1061292 74Ga0209448_101247872 75Ga0209068_101633872 76Ga0209698_110238862 77Ga0209168_103071311 78Ga0209526_102061941 79Ga0316363_101707961 80Ga0310686_1073547198 81Ga0307468_1001898983 82Ga0307473_107285411 83Ga0307473_108279901 84Ga0307473_110128582 85Ga0307473_114196292 86Ga0318562_103034431 87Ga0307471_1009839752 88Ga0335085_101396251 89Ga0335079_112165512 90Ga0326726_107932711 91Ga0316624_112637821
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Pfam ID	Name	% Frequency in 210 Family Scaffolds
PF00296	Bac_luciferase	7.62
PF01613	Flavin_Reduct	2.38
PF13620	CarboxypepD_reg	1.43
PF00941	FAD_binding_5	0.48

COG ID	Name	Functional Category	% Frequency in 210 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	7.62
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	2.38

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.57 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.95 %
Unclassified	root	N/A	28.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	61.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.90 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.95 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.90 %
Unclassified	root	N/A	28.57 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.90 %
Acidobacteriales bacterium 13_2_20CM_2_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5	0.95 %
Unclassified	root	N/A	28.57 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_104605373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1512	Open in IMG/M
3300000955\|JGI1027J12803_107925403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300001137\|JGI12637J13337_1013729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300001976\|JGI24752J21851_1017495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300005176\|Ga0066679_10505557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300005176\|Ga0066679_10751608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005178\|Ga0066688_10043066	Not Available	2575	Open in IMG/M
3300005179\|Ga0066684_10559240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300005184\|Ga0066671_10614905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300005187\|Ga0066675_10256772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5	1250	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.38%
Host-Associated	Host-Associated	7.62%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	6.67%
Plants	Host-Associated → Plants	7.62%
Terrestrial	Environmental → Terrestrial	85.71%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.38%
Peat	Environmental → Terrestrial → Peat	0.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.29%
Roots	Host-Associated → Plants → Roots	0.48%
Sediment	Environmental → Aquatic → Sediment	4.29%
Soil	Environmental → Terrestrial → Soil	85.24%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.38%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.38%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.48%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.48%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.48%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.48%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.48%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.95%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.10%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.29%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 171 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1046053733	3300000955	Soil	VSTGRKVLLIGGLVLALLGMLYGLHYAVFVEHQTLDRMGGSLAQAFVRAAERNPTQAHS
JGI1027J12803_1079254032	3300000955	Soil	MSRERKILIFGGIALAVLGMTYGLYYAVFVEHQTL
JGI12637J13337_10137291	3300001137	Forest Soil	VTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDHMGGSLAQSFSAAANRN
JGI24752J21851_10174951	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPRRILILGGILLAAFGMLFGLHYAVFVEHQTL
Ga0066679_105055571	3300005176	Soil	MTPSRRLLVFGGIALAALGMFYGLHYALFVEHQTLDRMGGSLSEAFVRA
Ga0066679_107516082	3300005176	Soil	MSGAKKILIFGGLALATIGMLYGLYYAVFVEHQTLDSIGGSLAGSFVQAAERRLPEAHGAIDAYAAAKYNYVRQ
Ga0066688_100430664	3300005178	Soil	VSPARTILIVGGITLAALGMLYGLHYAVFVEHQTLDRIGSSLAQAFVHAAERNPPSARDA
Ga0066684_105592401	3300005179	Soil	MNEARKLLIFGGIALAAFGMFYGLYYAVFVEHQSLDQIGGSLTATFAHAAERNWEG
Ga0066671_106149052	3300005184	Soil	VSGSSRLLVIGGLALAGFGMLYGLHYAVFVEHQTLDHLGGSLAQA
Ga0066675_102567722	3300005187	Soil	MSGARKLLIFGGVTLAAIGMLYGVYYAAFVEHQTLDSIGGSLDASFVHAAEGRLP
Ga0066388_1005947693	3300005332	Tropical Forest Soil	MSTGRGVLVMGGLVLAALGMLYGLHYAIFVEHQTLDRMGGSLAQGFLS
Ga0066388_1034763431	3300005332	Tropical Forest Soil	MSVARQVLLVGGFALATLGMIYGLHYALFVEHQTLDRMGGSLAQAFMQAAERRTAEVNDSVDQY
Ga0066388_1064987541	3300005332	Tropical Forest Soil	MNASQRLLIFGGMALAVFGMLYGLHYAVLVEHQMLDRMGGSLA
Ga0070689_1016806851	3300005340	Switchgrass Rhizosphere	MTSPRRILILGGILLAAFGMLFGLHYAVFVEHQTLDRMGGSL
Ga0070667_1015056482	3300005367	Switchgrass Rhizosphere	MTRSAKILICGGIALAAFGMLYGLHYAVFIEHQTLDRMGGALADGFVHTA
Ga0070708_1004524172	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSGARKLLIFGGVTLAAIGMLFGLYYAVFVEHQTLDRIGGSLATSFVHAA
Ga0070708_1010129901	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTGSRKLLIFGGMALAALGMLYGLYYAVLVEHQTLDHMGGSLAQSF
Ga0066687_106502551	3300005454	Soil	VSPARTILIVGGITLAALGMLYGLHYAVFVEHQTLDRMGSSLTQAFVHAAE
Ga0070662_1001775361	3300005457	Corn Rhizosphere	MTRSAKILICGGIALAAFGMLYGLHYAVFIEHQTLDRMGGALADGFVH
Ga0068867_1005660001	3300005459	Miscanthus Rhizosphere	MTSPRRILILGGILLAAFGMLFGLHYAVFVEHQTLDRMGGSLA
Ga0070696_1006499492	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSGSRKVLIVSGVALALWGMGFGLCYALFVEHQTLDKIGGSLA
Ga0066701_103010681	3300005552	Soil	MTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDRMGGSLA
Ga0066692_106569022	3300005555	Soil	VNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDHMGG
Ga0066700_103500192	3300005559	Soil	MSRDRKVLIFGGIALALIGMAYGLYYAVSVEHQTLDQMGGSLAGAFVS
Ga0066670_103367641	3300005560	Soil	MNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDHMGGSLATAFVCAAERQIPESRMA
Ga0066699_102699252	3300005561	Soil	MSTAGRILIFGGIALALFGMLYGLYYAIFAEHQALDKMGGSLATAFVQAADRDWEKSEYALSAYR
Ga0066699_105357501	3300005561	Soil	VNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLD
Ga0066693_100652701	3300005566	Soil	MRTADRILIFGGIALALFGMLYGLYYAIFAEHQALDKIGGSLATAF
Ga0066702_102244672	3300005575	Soil	MSGSRKLLIFGGLALAAIGMCDGLAYALFWEHQTLDAMGRALS
Ga0066706_105104922	3300005598	Soil	MNGPRKLLIFGGVALATVGMLYGLYFAVFVEHQTLGSMGGSLAGSFVHAAEGRLPEAHGAIDTYAAVKYNYVRQ
Ga0066706_113799122	3300005598	Soil	VSGARKLLIFGGVALAAVGMLYGLYYAVFVEHQTLESMGGSLAGSF
Ga0070762_109903921	3300005602	Soil	MMTRSGRVLVIGGLLLAVWGMTYGLYYAVFVEHQTLDT
Ga0068856_1021441171	3300005614	Corn Rhizosphere	MSRDRKVLIFGGIALALIGMAYGLYYAVSVEHQTLDQM
Ga0075284_10705872	3300005885	Rice Paddy Soil	VNAARKLLVLGGILLAAFGMLYGLHYALLVEHQTL
Ga0070766_106958861	3300005921	Soil	VTGSRKLLIFGGMALAAFGMLYGLQYALFAEHQTLDRTGGSLAQSFSAAASRNLAQS
Ga0066794_100508452	3300005947	Soil	VTGSRKLLMFGGMALAAFGMLYGLQYALFVEHQTLDHMGGSLAQSFAAAA
Ga0070717_106737372	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSRARKLLLVGGFTLAALGMTYGLHYALFVEHQTLDQMGGSLAQAFV
Ga0075028_1006653791	3300006050	Watersheds	MNGARKLLIFGGIALAALGMLYGLHYAVFVEHQTLDHMGGSLASAFVHAAERHRDDSQLALI
Ga0097691_10782791	3300006055	Arctic Peat Soil	VTGSRKLLMFGGMALAAFGMLYGLQYALFVEHQTLDHMGGSLAQSFAAAASRNLGQ
Ga0075019_102664921	3300006086	Watersheds	MTASRKLLILGGMALAAAGMLYGLYYAVFVEHQTLDQMGGSLTRAFASAAERDSSGSQ
Ga0075015_1008981851	3300006102	Watersheds	MSAARKLLLIGGLVLATFGMLYGLHYALFVEHQTLDRMG
Ga0075030_1001492341	3300006162	Watersheds	MTGSRKLLIFGGMVFAAIGMVYGLQYALFVEHQTLDHMGG
Ga0075030_1009105342	3300006162	Watersheds	MTGSRKLLVLGGMALAAAGMLYGLYYAVFVEHQTLDQLGGSLTHAFASAAERNST
Ga0075018_105094062	3300006172	Watersheds	VSRSRKLLILGGTVLAVLGMLYGLHYAVFVEHQTLDRMSGSLAGAFAHAAERGG
Ga0070716_1001928661	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VSRSRKLLILGGTALAVLGMLYGLHYAVFVEHQTLDRMGGSLAGAFANAAERRGDDSQLALTAYRE
Ga0070765_1008376062	3300006176	Soil	VSRSRKLLILGGTVLAVLGMLYGLHYAVFVEHQTLDRMGGSLASAFAHAAERRGD
Ga0075021_101158291	3300006354	Watersheds	MSAARKTLIFGGLLLAAFGMLYGLHYAVFVEHQTLDRMSGSLAAAFVHAAEGHLPQAESALESY
Ga0068871_1004516052	3300006358	Miscanthus Rhizosphere	VSRSRKLLILGGTALAVLGMLYGLYYAVFVEHQTLDRMGGSLASAFANA
Ga0066665_101500141	3300006796	Soil	MNGPRKLLIFGGVALATVGMLYGLYYAVIVEHQTLGSMGGSLAGSFVHA
Ga0075433_117814861	3300006852	Populus Rhizosphere	MTRSAKILICGGIALAAFGMLYGLHYAVFIEHQTLDRM
Ga0099794_100308204	3300007265	Vadose Zone Soil	MTGSRKLLIFGGMALASFGMLYGLQYALFVEHPTLDSMGGSLAQSFSAAANRDLG
Ga0099829_106149521	3300009038	Vadose Zone Soil	VTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFS
Ga0099829_108952812	3300009038	Vadose Zone Soil	VSAGRKLLILSGIALALFGMLYGLHYAVFVEHQTLDGMGGSLTAAFIQAADRDWEKSESALL
Ga0099828_108790122	3300009089	Vadose Zone Soil	MTGSRKLLIFGGMAIAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFSAAASR
Ga0099792_103113881	3300009143	Vadose Zone Soil	MTGSRKLLVLGGMALAAIGMLYGLYYAVFVEHQALDQMGGSLARAF
Ga0116120_10514491	3300009641	Peatland	MMTGSRKLLIFGGMAFAALGMLYGLQYALLVEHQTLDHMGGSLSQSFAAAASRN
Ga0116223_103192521	3300009839	Peatlands Soil	MNTPRKILIFGGLTLVSFGMLYGLYYALFMEHQTLDR
Ga0126384_103977212	3300010046	Tropical Forest Soil	MSRSGRLLLVGGIALAAAGMLYGLHYALFIEHQTLEHM
Ga0126373_102509001	3300010048	Tropical Forest Soil	MSTGRWVLVMGGLVLAALGMFYGLHYAIFVEHQTLDRMGGSLAQAFLSAAQRNMVDAHGA
Ga0126373_107700002	3300010048	Tropical Forest Soil	VSGARRLLVLGGIALAAAGMLYGLHYAVFVEHQTLDRLG
Ga0126373_108918042	3300010048	Tropical Forest Soil	MTRSRQILIFGGLILAALGMFYGLYYAVFVEHQTLDH
Ga0126373_118983563	3300010048	Tropical Forest Soil	VSRAQRILIFGGLGLAALGMLYGLHYAVFVEHQTLDRMGGSLAQGFVQ
Ga0134067_102660972	3300010321	Grasslands Soil	MRTADRILIFGGIALALFGMLYGLYYAIFAEHQALDKMGSSLATAFVQATDR
Ga0134071_104347482	3300010336	Grasslands Soil	VSRDRKVLIFGGLALAAFGMFYGLHYALFVEHQTLDQLGGSLATA
Ga0126370_102391393	3300010358	Tropical Forest Soil	MGGLVLAALGMLYGLHYAIFVEHQTLNRMGGSLAQAFLSAAQR
Ga0126370_105850551	3300010358	Tropical Forest Soil	MTSARQILVFGGLALATLGMAYGLYYAVFVEHQTLD
Ga0126378_129577942	3300010361	Tropical Forest Soil	VSRARKVLVSGGLALAAFGMLYGLYYAVFVEHQTLDEMGGALASAFIH
Ga0126379_115198212	3300010366	Tropical Forest Soil	MSRAAKLLIIGGVALATFGMLYGLHYAIFIEHQSLDGMGLNLTQAFVHSAER
Ga0126381_1017266701	3300010376	Tropical Forest Soil	VSGARRLLVLGGIALAAAGMLYGLHYAVFVEHQTLDQLG
Ga0134124_130545711	3300010397	Terrestrial Soil	VSREQKILIFGGIALALLGMTYGLYYAVFVEHQTLDQIGGSLAGAFVSAAEQKGPQAA
Ga0137392_108747241	3300011269	Vadose Zone Soil	MSGARKLLIFGGVTLAAIGMLYGLYYAVFVEHQTLDSIGGSLDASFVHAAEGRLPE
Ga0137392_115186211	3300011269	Vadose Zone Soil	MTGSQRLLIFGGMALAAFGMLYGLHYAVFVEHQILDRMGGSLEQSFELAARRNWEASE
Ga0137391_107147251	3300011270	Vadose Zone Soil	MSQARKLLVFGGIFLAALGMLYGLHYAVFVEHPTLARLGGSL
Ga0137391_111537591	3300011270	Vadose Zone Soil	MSGARKILVFGGMALATFGMLYGLYYAVFVEHQTLDRMGGSLA
Ga0137391_112352562	3300011270	Vadose Zone Soil	MSGAKKILIFGGVALATIGMLYGLYYAVFVEHQTLDSIGGSLAGAFVQAAERRLP
Ga0137393_100083446	3300011271	Vadose Zone Soil	MSGAKKILIFGGLALATIGMLYGLYYAVFVEHQTLDSIGGSLAGSFVQA
Ga0137393_101456441	3300011271	Vadose Zone Soil	MNGARNLLIFGGVALATVGILYGLYYAVFVEHQTLGSMGGS
Ga0137393_102752983	3300011271	Vadose Zone Soil	MSGAGKLLIFGGLALAAFGMLYGLYYAAFIEHQTLDTIGGSLAGAFVHAAERRIPEAHRA
Ga0137393_104923102	3300011271	Vadose Zone Soil	VTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFSAAASRNLGQSQA
Ga0137393_117908231	3300011271	Vadose Zone Soil	MTGSQRLLIFGGMALAAFGMLYGLHYAVFVEHQILDRMGGSLEQ
Ga0137388_107239211	3300012189	Vadose Zone Soil	VTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFSAAASRNL
Ga0137388_107253511	3300012189	Vadose Zone Soil	MTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFSAAASRNLGQSQA
Ga0137388_111325222	3300012189	Vadose Zone Soil	VTGSRKLLIFGGMTLAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFSAAASRNL
Ga0137363_103787401	3300012202	Vadose Zone Soil	MNRARKLLVFGGIALAALGMLYGLHYAVFVEHQTLDQMGGSMATAFVSAAV
Ga0137362_107381081	3300012205	Vadose Zone Soil	VSPARTILIVGGITLAALGMLYGLHYAIFVEHQTLNRMGSSLTQAFVH
Ga0137377_116780421	3300012211	Vadose Zone Soil	MSNARKLLIGGGTILAAFGMLYGLYYAVFVEHQTLDRMGGSLAGAFIH
Ga0137370_110235991	3300012285	Vadose Zone Soil	MTGSSRLLIIGGLALAAFGMLYGLHYAVFVEHQTLDQMGGSLAQAFQSAAGRHPEQAHAA
Ga0137387_102718831	3300012349	Vadose Zone Soil	MNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDHMGGSLATAF
Ga0137386_110776941	3300012351	Vadose Zone Soil	MSGARKLLIFGGVTLAAIGMLYGLYYAVFVEHQTLDRIGGSLATSFVHAAEGRLPEAHEA
Ga0137367_105208741	3300012353	Vadose Zone Soil	MTSSRKLLVLGGMALAALGMLYGLYYAVFVEHQTLDQMGGSLTHAFASAAERNWSQSQTALQA
Ga0137361_106484811	3300012362	Vadose Zone Soil	MTGSARLLILGGLALAAFGMLYGLHYALFVEHQTLDQLGGSLAQAFMHAADRHPVQSRAALKT
Ga0137361_110183162	3300012362	Vadose Zone Soil	VTGSRKLLIFGGITLAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFAAAANHDLGPSQAA
Ga0137390_103839931	3300012363	Vadose Zone Soil	VTGSRKLLIFGGMTLAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFSAAASRNLGQSQA
Ga0137395_104237821	3300012917	Vadose Zone Soil	VSAGRKLLILSGIALALFGMLYGLHYAVFVEHQRLDGMGGSLNAAFIQAADRDWDKSKSALLV
Ga0137396_1000020917	3300012918	Vadose Zone Soil	MSSARKLLLVGGLALAAFGMLYGLHYAIFVEHQTL
Ga0137419_102426822	3300012925	Vadose Zone Soil	MSTARTLLVVGGITLAALGMLYGLHYAVFVEHQTLDLMGGSLLQAFVQAAERNTME
Ga0137404_123350231	3300012929	Vadose Zone Soil	MSGARKLLIFGGVTLAAIGMLYGLYYAVFVEHQTLDSIGGSLDASFVHAAEGRLPEAHEAIDTYAA
Ga0164300_111178421	3300012951	Soil	MSAARKLLILGGVALAVLGMLFGLYYAVFVEHQTLDRMGASLAGAFVSA
Ga0153916_108478201	3300012964	Freshwater Wetlands	MSGTRKLLIFGGLALALWGMGWGLAYAVFFEHQMLDRMGGQISS
Ga0134077_104743191	3300012972	Grasslands Soil	VNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDQMGGSLANAFVHAAQ
Ga0164304_105429352	3300012986	Soil	VSRSRKLLILGGTALAVLGMLYGLHYSVFVEHQTLDRMGGSLA
Ga0157371_100161251	3300013102	Corn Rhizosphere	MTSPRRILILGGILLAAFGMLFGLHYAVFVEHQTLDRMGGSLATAF
Ga0132258_133027361	3300015371	Arabidopsis Rhizosphere	MTAPRRILIIGGISLALFGMLYGSHYAVFVEHQTLDHMGGSLATAFVEAAGENVTASRAA
Ga0182036_104934092	3300016270	Soil	MSSPRRLLVVGGLALTAFGMLYGLHYALFIEHETLGRMGGSLAQAFVSAA
Ga0182035_106417942	3300016341	Soil	MSSPRRLLVAGGLGLAALGMLYGLHYALFIEHETLGRMG
Ga0187853_103175612	3300017940	Peatland	MTGSRKLLIFGGMAFAALGMLYGLQYALLVEHQTLDHMGGSL
Ga0187779_102637372	3300017959	Tropical Peatland	MTRSGRFLVIGGLLLAVWGMTYGLYYAVFVEHQTLDSIGGSLT
Ga0187804_103958281	3300018006	Freshwater Sediment	LANSRKLLVFGGIMLAALGMLYGLYYAVFVEHQTLDQM
Ga0187784_101597193	3300018062	Tropical Peatland	MSAARKLLIASGLALALWGMGYGLYYAVFVEHQTLD
Ga0187772_114411552	3300018085	Tropical Peatland	LITSRKILVFGGLGLAAFSMLYGVYYALFVEHQTLD
Ga0066662_126961861	3300018468	Grasslands Soil	MTASRKLLIIGGVGLAIFGMIYGLHYALFIEHQTLDGM
Ga0066669_107388822	3300018482	Grasslands Soil	MNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDHMGGSLA
Ga0066669_112979272	3300018482	Grasslands Soil	MTASSRLLIIGGLALAAFGMLYGLHYAVFAEHQTLDQLGNSLTQAFQNAAARHPAQ
Ga0066669_119855631	3300018482	Grasslands Soil	MSGARKLLVFGGLALAAIGMFYGLHYAVFVEHQTLDSMGGSLATGFVAAAHRQMPEAQQGINAYA
Ga0193723_10197191	3300019879	Soil	MSLARKLLLVGGLVLAALGMVYGLHYAVFVEHQTLDRMGGSLAQAFVHAANRNTAGA
Ga0193713_10836672	3300019882	Soil	MSKARKLLIFGGTLLAAFGMLYGLHYAVFVEHQTLDRMGGSLSSAFSH
Ga0179594_103376232	3300020170	Vadose Zone Soil	MNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDHMGGSLATAFVCAAERQIPESR
Ga0210399_107497941	3300020581	Soil	MSTARIILLVGGITLAALGMLYGLHYAIFVEHQTLDRMGGS
Ga0210404_104814992	3300021088	Soil	VSRSRKLLMLGGTVLAVLGMLYGLHYAVFVEHQTLDRMSGSLAGAFAHTAE
Ga0210405_102250001	3300021171	Soil	MNTAQKVLIFGGLTLATLGMLYGLYYALFVEHQTLDRMGGSLTAAFVYAAEGHLPDADSSIEAYA
Ga0210408_102418301	3300021178	Soil	MNRARKVLIFGGTLLAAFGMLYGLHYAVFVEHQTLDGMGGSLARAFTNAGEGRAGDS
Ga0210408_103240922	3300021178	Soil	MNRSRRLLILGGAILAVVGMLYGLHYAVLVEHQTLDRMGSSLGGAF
Ga0210408_107187291	3300021178	Soil	LSGSRKLLVFGGLLLAAWGMLYGLHYALFVEHQTLDGMGASLTEAF
Ga0210389_114402501	3300021404	Soil	MNRARKVLIFGGTLLAAFGMLYGLHYAVFVEHQTLDGMGGSLARAFTNAGEGRAGDSRLALTA
Ga0210402_106049132	3300021478	Soil	MNTARKILIFGGLTLAVFGMLYGLYYALFVEHQTLDRMGSSLAAAVVHAAEGNLPEAESSVE
Ga0210402_106474522	3300021478	Soil	MNRSRRLLILGGAILAVVGMLYGLHYAVFVEHQTL
Ga0210402_119309321	3300021478	Soil	MSAASKLLIFGGLVLAAFGMLYGLHYALFVEHQTLDRMGGSLATAFVDAA
Ga0210409_103612101	3300021559	Soil	VSRSRKLLILGGTVLAVLGMLYGLHYAVFVEHQTLDRMGGSLAGAFAHAAERRGD
Ga0242655_103198482	3300022532	Soil	VSPARTILIVGGITLAALGMLYGLHYAAFVEHQTLDRMGSSLAQAFVHAAERNPPSA
Ga0193714_10608921	3300023058	Soil	VSAGGKLLILGGIALALFGMLYGLHYAVFVEHQTLDGMGGSLTTAFVQAADRDWKTSESALLAYRGTK
Ga0247794_101731381	3300024055	Soil	MTSPRRILILGGILLAAFGMLFGLHYAVFVEHQTLDRMGGSLATAFGQAANRDMTQAGT
Ga0207699_100914001	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNASRKLLIISGVALAALGMLYGLHYAVFVEHQTLEGMGTSLAKGFVQVSER
Ga0207699_103339262	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSRSRKLLILGGTALAVLGMFYGLHYAVFVEHQTLDRMGGSLAGAFANAAERRGDDSQLALN
Ga0207663_114618032	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSRSRKLLILGGTALAVLGMLYGLHYAVFVEHQTLDRMGGSLAGAFANAAERRGDDSQLALNAYRKTKY
Ga0207687_117974371	3300025927	Miscanthus Rhizosphere	MTSPRRILILGGILLAAFGMLFGLHYAVFVEHQTLDRM
Ga0207700_102206071	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSRSRKLLILGGTVLAVLGMLYGLHYAVFVEHQTLDRMGGS
Ga0207706_100245434	3300025933	Corn Rhizosphere	MTRSAKILICGGIALAAFGMLYGLHYAVFIEHQTLDRMGGALADGFVHT
Ga0207670_100588111	3300025936	Switchgrass Rhizosphere	MTSPRRILILGGILLAAFGMLFGLHYAVFVEHQTLD
Ga0207651_114080292	3300025960	Switchgrass Rhizosphere	MTSPRRILILGGILLAAFGMLFGLHYAVFVEHQTLDRMGGSLATAFVQAANRDMTQAGTA
Ga0207641_124190262	3300026088	Switchgrass Rhizosphere	MSSPRRILILGGIALAVFGMLFGLHYAIFVEHQTLDSMGGSLATAFVDAANRDMNAA
Ga0209234_10261163	3300026295	Grasslands Soil	MNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDHMG
Ga0209236_12702812	3300026298	Grasslands Soil	MSGARKLLICGGLALAAFGMLYGLHYAVFIEHQTLDRMGGSLASAF
Ga0209265_11849471	3300026308	Soil	MNRARKLLLIGGFALAGLGMIYGLHYALFVEHQTLDRMGG
Ga0209761_10995151	3300026313	Grasslands Soil	MNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDHMGGSL
Ga0209761_11335942	3300026313	Grasslands Soil	VNRARKVLVFGGLALAAFGMLYGLYYAVFVEHQTLDHMGGSL
Ga0209154_10337591	3300026317	Soil	VSPARTILIVGGITLAALGMLYGLHYAVFVEHQTLDRIGSSLAQAFVHAAERNPPSA
Ga0209687_11247772	3300026322	Soil	VSPARTILIVGGITLAALGMLYGLHYAVFVEHQTLDRMGSSLTQAFVHAA
Ga0209801_12068942	3300026326	Soil	MSGARKLLIFGGVTLAAIGMLYGLYYAVFVEHQTLD
Ga0209267_10275531	3300026331	Soil	VSPARTILIVGGITLAALGMLYGLHYAVFVEHQTLDRIGSSLAQAFVHAAERNPPSAR
Ga0209377_12330522	3300026334	Soil	VTGSRKLLIIGGMALAAFGMLYGLQYALFVEHQTLDRMGGSLAQSFSEAANRNLGQ
Ga0257177_10871992	3300026480	Soil	VSRSRKLLILGGTVLAVLGMLYGLHYAVFVEHQTLDRMGGSLAGAFAHAAERRG
Ga0257160_10312061	3300026489	Soil	MTASRKLLVLGGMALAAIGMLYGLYYAVFVEHQTLDQMGGSLARA
Ga0209807_11515462	3300026530	Soil	MNRARKLLLIGGFALAGLGMIYGLHYALFVEHQTLDRMGGSL
Ga0207509_1061292	3300026816	Soil	MSSARKVLMVGGLLLAAFGMLYGLHYAVFVEHQTLDRMGASLAQAFA
Ga0207779_10311061	3300026928	Tropical Forest Soil	MTGSRKLLIFGGMALAAFGMLYGLHYAVFVEHQTLDK
Ga0207484_1013801	3300027466	Soil	MTRSAKILICGGIALAAFGMLYGLHYAVFIEHQTLD
Ga0208199_10715761	3300027497	Peatlands Soil	MSAARKLLIFGGLALAAFGMLYGLHYALFIEHQTLDRMGGSLA
Ga0209220_11313421	3300027587	Forest Soil	MTPSRRLLVFGGIALAALGMLYGLHYALFVEHQTLDRMGGSLSEAFVRAA
Ga0209733_10466372	3300027591	Forest Soil	MIGSRKLLIFGGMALAAFGMLYGLQYALLVEHQTLDH
Ga0209106_11049042	3300027616	Forest Soil	VTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDHMGGSLAQSFSAA
Ga0209388_11200121	3300027655	Vadose Zone Soil	MTGSQRLLIFGGMALAAFGMLYGLHYAVFVEHQILDRM
Ga0209689_10149724	3300027748	Soil	MSGARKLLIFGGVTLAAIGMLYGLYYAVFVEHQTLDSIGGSLDASFVHAAEG
Ga0209448_101247872	3300027783	Bog Forest Soil	VTGSRKLLIFGGIACAAVGMLYGLQYALFVEHQTLDHMG
Ga0209701_103405972	3300027862	Vadose Zone Soil	MTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDRMGGS
Ga0209283_100773773	3300027875	Vadose Zone Soil	MNGARNLLIFGGVALATVGMLYGLYYAVFVEHQTLGSMGGSLAGSFVHAAEGRLPEAHVAIDTYAAVKYNYV
Ga0209590_105819062	3300027882	Vadose Zone Soil	MSGAKKILIFGGVALATIGMLYGLYYAVFVEHQTLDSIG
Ga0209068_101633872	3300027894	Watersheds	MSAARKTLIFGGLLLAAFGMLYGLHYAVFVEHQTLDRMSGSLAAAFVHAAEGHLPQAESALESYT
Ga0209488_100446074	3300027903	Vadose Zone Soil	VTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDRLGGSLAQSFSAAASRNLGQSQAA
Ga0209006_103620632	3300027908	Forest Soil	MSAAGKTLIFGGLALAAFGMLFGLHYALFVEHQTLDRMGGSLATAF
Ga0209698_110238862	3300027911	Watersheds	MTRSRRILIFGGLALAAFSMFYGVYYALFVEHQTLDG
Ga0209168_103071311	3300027986	Surface Soil	MSASRKLLIVSGLLLTVWGLCWGLFYAVFVEHQTLDSLGGEITA
Ga0209526_102061941	3300028047	Forest Soil	MTISGSRKVLLFGGLVLAAFGMLYGLQYALFSEHQTLDQMGGSLAQSFAAAAGRD
Ga0268264_100984613	3300028381	Switchgrass Rhizosphere	VSRSRKLLILGGTALAVLGMLYGLYYAVFVEHQTLD
Ga0307504_101111322	3300028792	Soil	MTGSSRLLIFGGLALAAFGMLYGLHYAVFVEHQTLDQLGGSLTQAFQHAAERHPAQSR
Ga0265324_101129231	3300029957	Rhizosphere	MTGSRKLLLFGGLALAAFGMLYGLQYALFVEHQTLDQM
Ga0310037_104635922	3300030494	Peatlands Soil	MTGSRKLLILGGMAFAALGMLYGLQYALLVEHQTLDHMGGS
Ga0316363_101707961	3300030659	Peatlands Soil	MNTPRKILIFGGLTLVSFGMLYGLYYALFMEHQTLDRMGSSLTA
Ga0170819_114846812	3300031469	Forest Soil	VSRSRKILILGGTVLAVLGMLYGLHYAVFVEHQTLDRMSGSLAGAFAHAAERRA
Ga0170818_1125046041	3300031474	Forest Soil	VSRSRKILILGGTVLAVLGMLYGLHYAVFVEHQTLDRMSGSLAGAFAHAAERRADVS
Ga0265313_102889512	3300031595	Rhizosphere	MTGSRKLLLFGGLALAAFGMLYGLQYALFVEHQTLDQMGTSLAR
Ga0310686_1073547198	3300031708	Soil	MTGSGKLLLFGGLALAVIGMLYGLQYALFTEHQTLDHMGGSLAQSFIAAASR
Ga0307469_102178053	3300031720	Hardwood Forest Soil	VSPARTILIVGGITLAALGMLYGLHYAVFVEHQTLDRMGGSLAQAFVHAAERNPPSAR
Ga0307468_1001898983	3300031740	Hardwood Forest Soil	MSSARKVLLVGGLSLATLGMLYGLHYAVFVEHQTL
Ga0307475_114492591	3300031754	Hardwood Forest Soil	MNAASKLLIFAGLALAAFGMLYGLHYALFVEHQTLDRMGGSLATAFGHAAERNLPAA
Ga0307473_106165522	3300031820	Hardwood Forest Soil	VTGSSRLLIFGGLALAAFGMLYGLHYAVFVEHQTLDQLG
Ga0307473_107285411	3300031820	Hardwood Forest Soil	MSAGRRVLLVGGLVLAALGMLYGLHYAIFAEHQTLDRMGGSLTQAFVRAAERNPVEANSSVDV
Ga0307473_108279901	3300031820	Hardwood Forest Soil	MSTARKVLLAGGFALATLGMLYGLHYAVFVEHQALNRMGGSLSQAFVHAAERNTA
Ga0307473_110128582	3300031820	Hardwood Forest Soil	MIASKKLLIFGGIALSIFGMLYGLHYAIFIEHQTLDQVGNSL
Ga0307473_114196292	3300031820	Hardwood Forest Soil	VTGSRKLLIFGGIALATFGMLYGLQYAVFVEHQTLDHMGGS
Ga0307478_109957671	3300031823	Hardwood Forest Soil	MSGARKLLIFGGLALAAFGMLYGLHYALLVEHQTLDRMGGSLATAFVDAAERNMP
Ga0310917_104232012	3300031833	Soil	MSSPRRLLVAGGLGLAALGMLYGLHYALFIEHETLG
Ga0306921_107080111	3300031912	Soil	MSSPRRLLVAGGLGLAALGMLYGLHYALFIEHETLGRMGGSLAQA
Ga0306921_110758262	3300031912	Soil	MSGARKLLIFGGIALAALGMLYGLHYAVFVEHQTLDGMGRSLASGF
Ga0307479_107540872	3300031962	Hardwood Forest Soil	MTGSRKLLIFGGMALAAFGMLYGLQYALFVEHQTLDHMGGSLAQSFSAAANRN
Ga0307479_111802771	3300031962	Hardwood Forest Soil	MTGSRKLLVLGGMVLAAIGMLYGLYYAVFVEHQTLDQIGGSLARAFASAAAQNSSESQT
Ga0308176_100389881	3300031996	Soil	MSRDRKVLIFGGIALALIGMAYGLYYAVSVEHQTLDQMGGSLAGAF
Ga0318562_103034431	3300032008	Soil	MSPSRMLLLVGGLSLATLGMLYGLHYALFAEHQTLDRMGGSLAQAFSQAAG
Ga0318505_103733301	3300032060	Soil	MSPSRMLLLVGGLSLATLGMLYGLHYALFAEHQTLDRMG
Ga0307470_113851102	3300032174	Hardwood Forest Soil	VTGSRKLLLFGGMTLAAFGMLYGLQYALFVEHQTLDHMGGSLAGSFS
Ga0307471_1009839752	3300032180	Hardwood Forest Soil	MSGSRKLLIAGGTVLALLGMLYGLNYAVFVEHQTLDRMSGSLATAFVSAAERRLPE
Ga0306920_1009269451	3300032261	Soil	MSGARKLLIFGGIALAALGMLYGLHYAVFVEHQTLD
Ga0306920_1013287981	3300032261	Soil	MSSPRRLLVAGGLGLAALGMLYGLHYALFIEHETLGRMGGSLAQAFVSAA
Ga0335085_101396251	3300032770	Soil	MSAARKLLIFSGIAMASLGMLYGLHYALFVEHQTLDQLGGSLAAGFVHAANRQMPE
Ga0335079_104894332	3300032783	Soil	MTRSGRFLVIGGLLLAVWGMTYGLYYAVFVEHQTLDSIGGSLTNAFVH
Ga0335079_112165512	3300032783	Soil	MNASRKLLVLGGMALAAFGMLYGVHYALLVEHPVLDRMGGSLAGAFVNAAARRMPEAQSAIADF
Ga0335078_111837361	3300032805	Soil	MTRSGRFLVIGGLLLAVWGMTYGLYYAVFVEHQTLDSIGG
Ga0335084_111901452	3300033004	Soil	MSAASKLLIFGGIALAAFGMLYGLHYALFVEHQTLDGMGGSLMTAFTGAARGHMPEA
Ga0335077_111689502	3300033158	Soil	MTRSGRFLVIGGLLLAVWGMTYGLYYAVFVEHQTLDSIG
Ga0326726_107932711	3300033433	Peat Soil	MSGARKLLVFGGVALAACGMLYGLHYALFVEHQTLDHMGGSLATAFVNAADR
Ga0316624_112637821	3300033486	Soil	MSRARKLLVFGGIALAMLGMLYGLYYAVFAEHQTLDRMGGSLAQAFMGAAEGNVPAVD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F023432

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences