Sample 7000000465

Basic Information
IMG/M Taxon OID	7000000465 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063646 \| Gp0053016 \| Ga0031244
Sample Name	Human tongue dorsum microbial communities from NIH, USA - visit 1, subject 763901136 replicate 2
Sequencing Status	Permanent Draft
Sequencing Center	Baylor College of Medicine, J. Craig Venter Institute (JCVI), Washington University in St. Louis
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

7000000465 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0063646 | Gp0053016 | Ga0031244

Sample Name

Human tongue dorsum microbial communities from NIH, USA - visit 1, subject 763901136 replicate 2

Sequencing Status

Permanent Draft

Sequencing Center

Baylor College of Medicine, J. Craig Venter Institute (JCVI), Washington University in St. Louis

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	79977193
Sequencing Scaffolds	15
Novel Protein Genes	18
Associated Families	12

Dataset Contents

Total Genome Size

79977193

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ct6uZ8	3
All Organisms → Viruses → Predicted Viral	3
Not Available	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctYA416	3
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ct6uZ8

All Organisms → Viruses → Predicted Viral

Not Available

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctYA416

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula

Ecosystem Assignment (GOLD)
Name	Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Oral Cavity → Tongue Dorsum → Human → Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase

Ecosystem Assignment (GOLD)

Name

Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase

Type

Host-Associated

Taxonomy

Host-Associated → Human → Digestive System → Oral Cavity → Tongue Dorsum → Human → Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal surface

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Host-associated → Animal → Animal surface

Location Information
Location	USA: Maryland: Natonal Institute of Health
Coordinates	Lat. (^o)	39.0042816	Long. (^o)	-77.1012173	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

USA: Maryland: Natonal Institute of Health

Coordinates

Lat. (^o)

39.0042816

Long. (^o)

-77.1012173

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F027205	Metagenome	195	N
F043991	Metagenome	155	N
F054110	Metagenome	140	N
F080166	Metagenome	115	N
F081455	Metagenome	114	N
F081456	Metagenome	114	N
F089057	Metagenome	109	N
F092229	Metagenome	107	N
F095629	Metagenome	105	N
F099452	Metagenome	103	N
F103435	Metagenome	101	N
F105379	Metagenome	100	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
C1875341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	576	Open in IMG/M
C1876634	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ct6uZ8	584	Open in IMG/M
C1917777	All Organisms → Viruses → Predicted Viral	1078	Open in IMG/M
C1943363	Not Available	5774	Open in IMG/M
SRS015038_WUGC_scaffold_18126	Not Available	687	Open in IMG/M
SRS015038_WUGC_scaffold_20868	All Organisms → Viruses → Predicted Viral	1525	Open in IMG/M
SRS015038_WUGC_scaffold_23166	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ct6uZ8	586	Open in IMG/M
SRS015038_WUGC_scaffold_30442	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctYA416	4731	Open in IMG/M
SRS015038_WUGC_scaffold_30621	All Organisms → cellular organisms → Bacteria	5315	Open in IMG/M
SRS015038_WUGC_scaffold_31586	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ct6uZ8	7564	Open in IMG/M
SRS015038_WUGC_scaffold_31789	All Organisms → Viruses → Predicted Viral	1740	Open in IMG/M
SRS015038_WUGC_scaffold_35098	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2408	Open in IMG/M
SRS015038_WUGC_scaffold_37201	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctYA416	6192	Open in IMG/M
SRS015038_WUGC_scaffold_37273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula	25772	Open in IMG/M
SRS015038_WUGC_scaffold_8801	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctYA416	829	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
C1861768	C1861768__gene_95146	F080166	NYNKVVEQIFELNYQLTLKMEVTFNNIIKRINTEIKENFHTEYVVGANKLTTNLRYRYRMRLSPRGETVGVIIDWDNYDDLCTIIDEAIDICDPNNKTSPFKRMYSTAGDLLDIKCDSLKVRYLHLDDRFGNRLDLMPFVLIDDHNGTLTEAMKFRFNNDLIFDVPVSRLK
C1875341	C1875341__gene_100986	F027205	RTHVASRLIVSADDILKAVKESEEFERKALKEAQKRDRAEGKETREVLYPNPDLKPGREIVLDYIKNPERRRTPRCSVHLEKRTANNSYRFIVDVSQVRNRELADEIEKDLFAFMDYILDEYDIPRRIRK
C1876634	C1876634__gene_101553	F105379	CDKILYDRNYVNPIIGVGPEKSYFQTTSFMVDLSPHINNLLVNISDLKNLDKITQLQPSKENPEIAIHKPVVSVFNWDAEYVKACMNSLREYQIDDNIIARTDEFHNTDCYNELMAGSASTGAFRINIGGYMIDIPKSAIPTLKSDHVVATVYNAPNKNFNILRFKITKRNGIIVNQSMLFLPY
C1917777	C1917777__gene_120649	F043991	MSKKNPSVIDYFDLNGDLNEEAYEFDGISLEDWIDKRSSIKPSWVGQYSQQMHFDLPDDTEVSFYKTPNVIYADILFAGGVRTILFKCRQKKNLTRFISRVLELANLGSKHIHPDFRA
C1940105	C1940105__gene_135537	F103435	MKFVFCTEPIYQYYRSYLYADDKDKLDKQLMVEYGDYKDFWDLKQQQDALPENIFVAELTSRDYPRNPWNYVSQLISKLTYQYLIDSPDFETIFSEVLFNQSEVEFYEFYKAIFRFYNGSEVFIIVSNDEYSDMVTQMMCNVIRRTYGIHPQIIYDMDDVYSIRDDIDFSPQGAQLAYLQRSAYYKLEAKKNFEPLQIWYPFDMNTYTNALE
C1943363	C1943363__gene_139583	F099452	MDKTYTELLQETLSKIYELKDLNNRDRGKSLTIFIGERLNRELILSSMNIFNLYKDIINLDDVSLLAELRHTEWYKDWFTSDKRNSDLIDLSRFNFRVLERFEKEEYLRDAEHYDFEGVSEVDSYDLFDTLREDEDIELFKLAAENILINHGFFNNTDYNLYEIPDEYMSNQEVCLYMCLLNTDNLDFMDKKIFDSTLLYNIVKDRICGSVYFTIFDSLNEDTRTRAR
SRS015038_WUGC_scaffold_18126	SRS015038_WUGC_scaffold_18126__gene_19411	F081455	ETHIMETTNTENKNLFQQLARLGFDVNESLLELEKEYAPVEEIGMQNIDIIDAAEEAIQQPLANTDSSIAVNFSQMINKPEVEEVKTEVASVPDNGETKVNVFFPKNEHILSNYVNYDSFNKIKESNTETIVRAVRLLNYKMSDQNAAMKFGQFVSEFNSECDPSKRLRYELIRHQGREKDLVVRLSTVVNGTTKYYADIYPDLNKIDIDHHLISSARK
SRS015038_WUGC_scaffold_20868	SRS015038_WUGC_scaffold_20868__gene_22772	F081455	METTINKKDLGFINNLIRDCDDYININHRERMAEKLLRVAIEDSDIPPIGMQNIEIVDSATDAIQQPLVNTDSSIAVNFSQMINKPEEVKTEVASVPDNGETKVNVVFPKNEHILGNYVDYDSFNKIKESNTETVVRAVRLLNYKMSDQNAAMKFGQFVSEFNSECDPNKRLRYELIRHQGREKDLVVRLSTVVNGTTKYYADIYPDLNKIDIDHHLISSARK
SRS015038_WUGC_scaffold_23166	SRS015038_WUGC_scaffold_23166__gene_25607	F105379	CDKILYDRSYVNPIIGVGPEKSYFQTTSYMVDLSPHINNLLVNISDLKNLGKITQLEPSKENPEIAIHKPVVSVFNWDAEYVKACMNSLREYQIDDNIIARTDEFHNTDYYNELMAGSASSGAFRINVGGYMIDIPKSAIPTLKSDHVVATVYNAPNKDFNVLRFKITKRNGIIVNQSMLFLPY
SRS015038_WUGC_scaffold_30442	SRS015038_WUGC_scaffold_30442__gene_35059	F092229	MNKEYRFNHIPEVVLRNIRFIRDNNIDIGTGDDVLECMMDINPIVRTKIYDDYEFAKDVAERRFGSTIEKLDLRTVLQKCITRPYNSILNNIYFRYFNSELIDDLFKLGQSSKVLDLAIEYECEYYTVNAAKTNIRRYNTDAYYNKFAADSNIISSHRSLHDPQVNAVKSAEFTYDLLIASRAEEFNPEIVREIFVKYGLKPNSSRNLYNRINDNLNLFYYIEDYLDEYREEGRFIYGTKEYKILKELRGLPLMVVLTQLTRKNDSGYILNSNLELVKG
SRS015038_WUGC_scaffold_30621	SRS015038_WUGC_scaffold_30621__gene_35306	F089057	MINVIPLIAKKYNRKGDTSGSLKSLISDLNCVTDNDDVLLFLSSIPRETKYSLDDAFDIIVSNDEYSNIFRATLVFLNIDLDYHRLLLNAIKSESYTIICMINKAIPTPDLFLAKNNYECLTIALDKSYAIFDKVLGMVVGQIKHTASSKEGRALGLFMTICILNKDIDKLASLCTGYLATCRSEYMVKDLMNKSAMDAFQYMSEEDIHTVVDDINSRSVLSRYLNNM
SRS015038_WUGC_scaffold_31586	SRS015038_WUGC_scaffold_31586__gene_36781	F095629	MMRELIICICLIGCFSIANANNIEQPKEVKIVHNDDSVILHKKIYQLEKRIERLEELLKKEDK
SRS015038_WUGC_scaffold_31789	SRS015038_WUGC_scaffold_31789__gene_37086	F089057	MTNIIPLIAKKYNRKGDTSGTLKSLVDDLVFIEDVDDSLLFITNIPRETKYSIEEVFNIISSNDKYSEVLSNVLSSLNIDLDYHKLLLNAIDSESYKIISLISDNIPTPDLFLSRNNYGCLTIALGKSYTIFDKVLGMVISQLLHTSSKEDKILSLFMTICIVNKDIDKLASLCTGYLAITKDEVLVKDLMNESATMAFQYMSEEDIHDVVDDI
SRS015038_WUGC_scaffold_35098	SRS015038_WUGC_scaffold_35098__gene_42687	F081456	MFEEPPIYYILISLIFLIVFGAISFATWMVWLTSIAFFAKLVVTAIGCLLCAMTVILYTISAD
SRS015038_WUGC_scaffold_37201	SRS015038_WUGC_scaffold_37201__gene_47042	F092229	MNEEYRFKHIPEVVLRNVKFIRENNIDIGTGDDVLECMMDINPVLRQRIYDDYDLAKDVAERRFHTTIEELDLTTILQKCTTRPYIAILNNIYFRYFNSKLIDDMFKLGESTKVLDLAIEYECEYYTVNSAKTNIRRYMQQAYFDKYAADADIISSHRVLSDPQVNAVKSAEFTYDLLVAARSENFNPEMVRDIFLKYGLKTNSSRNLYNRMDNNLSLFYYLEDYLEEYVNTGKFTYGSQEYSTIKEFKYLPLMNVLTQLTRSNPSGYVLNHKLELVKG
SRS015038_WUGC_scaffold_37273	SRS015038_WUGC_scaffold_37273__gene_47211	F054110	VVDVRQSWSKYDKPCKVYIVSRMYTEEEYKLTFPHKYKKGKTFKEKQLYKKESEYSSTKQHEVLLFLVKTYKGGD
SRS015038_WUGC_scaffold_7498	SRS015038_WUGC_scaffold_7498__gene_7826	F103435	MKFVFTTEPIYQYYRAYLYPSDKDKLDKDLIVEYGDYKDYWDLKNQQDALPENIFVAELTSRDYPRNPWNYVSQLISKLTYSYLIDNPEFENIFSEILFNQSEEEFYEFYKAIDRFYNGSEIFIIVSNDEYSDMVTQMMCNVIRRMYGIHPQIIYDIDDVLNIRDDIDFSPQGAQLAYLQRNAYYKLEAKRSLEPLQIWYPFDMNTYTNALE
SRS015038_WUGC_scaffold_8801	SRS015038_WUGC_scaffold_8801__gene_9153	F080166	NYNKVVEQIFELNYQLTLKMEVTFNNTIKRINTEIKENFHTEYVVGANKLTTNLRYRYRMRLSPRGKTVGVIIDWDNYDDLCTIIDEAIDICDPNNKTSPFKRMYSTAGDLLDIKCDSLKVRYLHLDDRFGNRLDLMPFVLIDDHNGTLTEAMKFRFNNDLIFDVPVSRLKGFRRFLMTYNPLLHAGSMARYMAITPLLGNNRQNMMR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

7000000465: Human tongue dorsum microbial communities from NIH, USA - visit 1, subject 763901136 replicate 2

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences