Sample 3300030698

Basic Information
IMG/M Taxon OID	3300030698 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128996 \| Gp0213249 \| Ga0187757
Sample Name	Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium under thermal stress from Pennsylvania, USA - 33_T1F_2612EL1 (Eukaryote Community Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	95216600
Sequencing Scaffolds	23
Novel Protein Genes	29
Associated Families	25

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	14
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2592	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → Perkinsus marinus	1
All Organisms → cellular organisms → Eukaryota → Sar	1
Not Available	1

Ecosystem Assignment (GOLD)
Name	Metatranscriptome Of Upside-down Jellyfish Cassiopea Xamachana Infected With Symbiotic Dinoflagellate Symbiodinium From Hawaii, Usa
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Metatranscriptome Of Upside-down Jellyfish Cassiopea Xamachana Infected With Symbiotic Dinoflagellate Symbiodinium From Hawaii, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	USA: Pennsylvania
Coordinates	Lat. (^o)	40.7982	Long. (^o)	-77.8599	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000076	Metatranscriptome	2620	Y
F000085	Metagenome / Metatranscriptome	2467	Y
F001767	Metagenome / Metatranscriptome	638	Y
F002609	Metagenome / Metatranscriptome	543	Y
F003025	Metagenome / Metatranscriptome	512	Y
F003026	Metagenome / Metatranscriptome	512	Y
F004604	Metagenome / Metatranscriptome	431	Y
F004725	Metagenome / Metatranscriptome	426	Y
F013530	Metagenome / Metatranscriptome	270	Y
F014507	Metagenome / Metatranscriptome	262	Y

Scaffold	Taxonomy	Length	IMG/M Link
Ga0187757_1005732	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	873	Open in IMG/M
Ga0187757_1006486	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	566	Open in IMG/M
Ga0187757_1007063	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	565	Open in IMG/M
Ga0187757_1008058	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	917	Open in IMG/M
Ga0187757_1012043	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	613	Open in IMG/M
Ga0187757_1012940	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	738	Open in IMG/M
Ga0187757_1022107	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	639	Open in IMG/M
Ga0187757_1023354	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	619	Open in IMG/M
Ga0187757_1025305	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	529	Open in IMG/M
Ga0187757_1026364	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	533	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0187757_1005567	Ga0187757_10055671	F070138	MTAAEAKFYRDGYTHRTVLFDSMQDAKAEYGGALNFSAYRQGRDRQYLGVNGKNYYAKPWGNDSSNIQAVINGPSYWKRVYYRENIAARFAREDAEAAERKAQAEIAEALSTGAGEAPPRRSQSESALQKPKTLDAKDTYAPIKENMKPFVEKQGKPRIRAMEAGERLHFFNTLHNKYHMKAGGKNLEWNVSKQTHRSTKNELNWILSNYFRTDSHAVLKGAGHD
Ga0187757_1005732	Ga0187757_10057321	F045108	PSTGLGVPEELQDISIAGRDVDTPHWSEKPLEDAQGGLTLEQLDWPNVHGLACASSGFLFLFELVRFCAGQPPSDFECYAAALIYAVIYSSRFDGIRTLAPHFRVTFYATTGWTVYYIAHLLAATNPVIFGHWVYPAGIVFLASSIYFYKHWIERMYRHYVEDRFRPYYVPGLVGLMYFHWLDTVDMLNQWLDPQYWEHVVVDLPDQAWTIADVRLTGLFMSSMALFMITLHNKGVLTGGKNTLITVLFTIFVPALFLTGTHATLQASFP
Ga0187757_1006486	Ga0187757_10064861	F004604	GAHAGLAVAWRCRSQRQAAAKESTPTKYTETVADERLFEQVYLQYTSEYLKGPLYWHPDKLQGWLPDYPGTPMIKEGKYTSHVIGNLKAFSSNELAFLSMLFFGVGLYGNLQFNFYDPQWAKVDAGGFFNVSYIVESFLLPISFFMHIACYIQRQNGK
Ga0187757_1007063	Ga0187757_10070631	F085123	KALRKVPVVPSDALTQLFECHLALETEQKSQYRRFRDRMDQETVEALQDHYREARKDERRCSDKHRSDVASVLKSLVEGSVHVNHRTSCGLLVDVAALRKRSSTDGFVHVDLDSNVTFVRSLDHDDPATAGIVIEGAVALRRRILQKQGLRLVTVRESEWRDLDESKEKRRHLRNLLSALGDVLE
Ga0187757_1008058	Ga0187757_10080581	F083686	LKIYHAIPYYHPLLKNSLRAMASLHAQQFEILVACTCNCFSSVGMLLFNKLAVQALPLECSLVWLQLFFAAFFMLIFGFPYLHIGSMKDFLRWCMVVPFFTGMLMTSILALKKAPMSLVIVLRSASPLFSLIFERFYPEPLRISGPMVCAIVVMVAGAVMYVSQLHAEHWEGIGWVMLNSIVAVCDRLLQRLLLSKEQHPVDISKTGITVINNMMGLIPVGMAAYFTGEVGQFPYAYANLTGLDKVYIGLSCVIGLSIGFTGIWAQSLISATSFLVMVNANKFVIIGIEAFGMHTKVLTHGQILG
Ga0187757_1010884	Ga0187757_10108842	F071953	MFLVTPFRNGLTLGATSPASAVELYQQVFAQGLAKGWTGGAFTARAACPQFLCLGPAYHFYASFSGVGGGVLLTSLTETLIVYGAETKNAQLAMNQKSPGSIPSVHPSWKPFGPGFGIHVFRNVIATAGLRMFCTPCTTAIEKATGNSNSMTTLAGDFAGNVCAACLSAPVHQLYGYTVTTPELRTLPAAEQRERMVSFLKNQYLDTSNGRTRLSGLVPRDLFMRSMYVAVAYTMYSTVERTLVANWPQ
Ga0187757_1012043	Ga0187757_10120431	F048099	ENPWRPGYGLRAATEGTEAEMSFAAGLTKIVQSKQSEVANREKIAESWKATEAKLLDAAVELFKNRCIKEAELEKCEATISFEVITREIPDFPKRILTDSTYFVDSWPSGTSAESWFYATRGVNSAFSQGAPILFAEVLQASLPQFVNRVKELGFSECNHEAGTWKVAVRWPRPDDDAPAEKKKKRRKD
Ga0187757_1012940	Ga0187757_10129401	F003025	GKCNKEFWSKWIPRRIKHNAFVLSLWACIWLLGTYPLGRPLSEGWRFMFTVSVFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187757_1020681	Ga0187757_10206811	F004604	AVGAHAGLAVAFRARAARKAETKPAEKKYVETVADQRLFEQVYLQYTSEYLKGPLYWHPDKLQGWLPDYPGTPMIKEGKYTSHVIGNLKAFSSNELAFLSMLFFGVGLYGNLQFNFYDPQWAKVDAGGFFNVSYIVESFLLPISFFMHIACYIQRQNGK
Ga0187757_1022107	Ga0187757_10221071	F100359	FGEGTCLCHAMAKDVRNPEFWNKFMQRPEVQAAMRSKLKYESAAEAAQRTKLDKLERKQRRYEIMNELMKCATNVKHLISPMFRYKITQQYLWKVLCEARKEGLLFCDKLRQPQVYHRLQAIKAEITAGPYGVAGWQAEEEVEEDLMDKMVVEADCIPGGIDGEAPDRKQVLDRREIQGVLDFGQRIKSEGNEAFMNENWEGALTRYCQGDE
Ga0187757_1023354	Ga0187757_10233541	F096614	MCPLPDSRCQAAEGVLPSIADLLLNVLSYLRAASLSQLLYSSHEAELWVRMYLPALVDKRGWGNADLSANPLSTLHLSEMWDVLANVCSPIGVNFMLLRHTFYGTMLELQLSPGSTLAHFNFRASDEAAPMWCRGSFAVRGALQCGKWTDELRQRPRRTPITQDSLAKQSSYRVEHCGDRFVLR
Ga0187757_1024356	Ga0187757_10243561	F000076	WLKRQKGSNSQPSLAPPFPCWCTMAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTIGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0187757_1025305	Ga0187757_10253051	F004604	KPAEKSKYVETVADQRLFEQVYLQYTSEYLKGPLYWHPDKLQGWLPDYPGTPMIKEGKYTSHVIGNLKAFSSNELAFLSMLFFGVGLYGNLQFNFYDPQWAKVDAGGFFNVSYIVESFLLPISFFMHIACYIQRQNGK
Ga0187757_1026364	Ga0187757_10263641	F003026	ITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSMMMQQGK
Ga0187757_1030866	Ga0187757_10308661	F057101	LEKARSPTGLLTVQIGKMECGQFVGKIKPDKDVERMARKFKLDDHVTSRVTELKVWRKRNGEEDRAAKDLERIEYHLRFAKRPNALCTLLVGRLLEGEIDELPDLTNAEKIMTDFKLDEDACSKLREIIEKRSPDEERVLTSVRKHLKSASNASSMLCKIARQLIDGQDLPDPPERPPKGKGGGKDGGKDDGERSERRDRDGGDRHHD
Ga0187757_1032130	Ga0187757_10321301	F004725	ARLWKSRSQTDLLQFSVAIVPMATSAPLLGKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSNDKMLSVQKNDENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFCTQVLMVIGYCAALATFPDYWWTCTLCFGVPFSYIAIQNIYIDHDVMHGATFP
Ga0187757_1048703	Ga0187757_10487031	F080873	QVLESDTSSEVAMKFAHGFVLFLSLLAQTGSEFLKKNEHSRALAVELSSKPPLPAKPTFGPEAYVLGVIAPGSFIMGLAAVVLLRYYERRYPSNDLEVVDREPENLDEDVYGAGVATLVRDSYSLIEGKGSLFLRISRLSSSFLLMLFVVFLQIFIILQMQKLVASRAVTEIRQIYGRYEFVMYGADMSHIYLTENGFPRGVDPTYFHAANFGRLTESEQASACRIPFSQPQLLLPILFIWTLTVVADLRRCGDLFVRLILATPTISSMRDAVVEGEGECEVVVGLTGALKAVLMASCIVPRYLINVYLLWLGCRWLAATPSFGDLLLNAVALEFILLLKDTLYAGVVPDRNKRATQNTLIQPWQKREPANYRVFLSSFLLILVTCSWVLYYVYRFQAVL
Ga0187757_1052584	Ga0187757_10525841	F064389	TLLTEADLHLGASAAGELRSGAMTVQVCLLDFPWVLDYILATRFNCSLRQIRHAVCSIVLTLRTILSAAVELGILVSQDSDSDGSVSAKPFIDNMIHVIRECLKNFPLCLDSEFFHSFLEPLPSHLRFLCGNFHPLTHMQFEDSAKQKAFEAQTKAITQALSELPSQCSNLELHMSSQEPVLKQIQLIKEHLRAPLWMLMHDFRSLQGEEKLLVEDVRQAVRATAELQARETGELPSWPQVLGDTLLLLLPLWKLSALAVAKGQEALTHFVAGPPLGANLGAQRLLRRLIEVLLSEKADFMDIALWFAAEPSSAALLTSGEAVHFLLPEAANDEEFASFRKEGLMRTQDNLAYLQGHLLRLPKHLRVHVSAYWRKAVEEVHLYLQLYLRVIEAFLEVQKEVHTFVQTQLFIEVLLGLPLLTWLSTDGVSPRPRGVRDAKSAAHAA
Ga0187757_1069823	Ga0187757_10698231	F001767	MATSAPLLGKEGKKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSSDKMLSVQKNNENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFFTQVLMVIGYCAALACFPDFWWTCTLCFGIPFAYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWVPRRIKHNAFVLALWTCVWMLGTYPLGRPLSEGWRFMFTVSFFARVGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187757_1074848	Ga0187757_10748481	F014507	NLAFLFTKITPEQMIYMWNVLTAIFCTQVLMVIGYCAALACFPDYWWTCTLCFGLPFSYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFVSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWIPRRIKHNAFVLSLWACIWLLGTYPLGRPL
Ga0187757_1081705	Ga0187757_10817051	F098651	RPAQGPGPGEMPAVRARASRKHLTEYQGWPKGIYPMSDGWVPPCYPKEEELIEYEEKMKARKKATLVKRHLCVKEPQLQRLSKRAFAQKSEYSMLAYAIAEGEYSGEGDDRSYFVIVFYEPAKKSKVERAFKSVGAALADYEQVVVDPDSKMEQEEKFMFAHGAGDPGECILGEYEYQVVPKGSPEYDDPWGPTHPEGKFWE
Ga0187757_1082420	Ga0187757_10824201	F004725	AWADKCLEEFFAQGDQERSRGIPVQFLNDRQKLKRSVPFVIASMATSAPLLGKEGKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSNDKMLSVQKNNENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFCTQVLMVIGYCAALATFPDYWWTCTLCFGVPFSYIAIQNIYIDHDVMHGATFP
Ga0187757_1091896	Ga0187757_10918961	F000085	NLQGFGATVGCFQDDCQNTDKFVASSIESCTKVCQSLPECEFWVWGQEEGEQKCWFRLGDDGREAGEGWISGGRACHPPGQQAIVMGNVECWIDGFNYDTCCDPKFGPSGNAQCWDGVFNYDRCCFPKDEL
Ga0187757_1094184	Ga0187757_10941841	F074387	LPEAAARDMTDRFYPVGMEADAENWKTTYEVMNEMRSFARSPYPPGTAIHQPGSRDHFGYSAPGPIASRLTNSELALTEDTDIPNPREHMAITRIQEPDDRRVFEKHDVDEMLRTYNSPVAKATLSPSKPQSLAKTFSLPTIARRSEAPPKLSERNPVIKKLEDAHFSYFVPKNMQREHKDRLNTAQLSKLKKANMISFPFTGEGTGFRSQGSGANWWPSGSYAQVPTSYRLQFGRPGFFRDTSPLMQSKFPQQAVSAAQEDLQ
Ga0187757_1095644	Ga0187757_10956441	F013530	EKLFSNMAGEAGEISKEGFKELVRVFYKCVKATVMSEEMSIKSKTIRRLEVGEVLEALEGPTMEEATKVKRLRCLATQDECMGWVTLAGNQGTSFLEAGGNFYTCVKETLITDGLCVQDSKTVRRLAKGEVVEVLEFQKKDATADVRRIKGKAKQDGAIGWITIASNAGTTFLEPC
Ga0187757_1102681	Ga0187757_11026811	F002609	EEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWIPRRIKHNAFVLGLWTCVWLLGTYPLGRPLTEGWRFMFTVSFFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187757_1104555	Ga0187757_11045551	F058692	SARGHEGSGSAQMDQPGGSMGYARKEGSSFTPGQRKRLNVVAITINILAPWLLFCGIFAALSFQLHYYHPALAWSCAGAGLVLAAVCAFLAHRSRMQEQDPTWCTFAAMACAPPCVAIGIMLGYLAATVLAATLGDTNYWYHMQPYYDIENINSYPDVSPARERGQQLMDAGRVYFEDGASLDVSKSMSFKNLERYCVAPITSGAAPLSSYDFWAVGVNCCGGARGDFRCGEYNNPKARAGLRLMRDDQRPFFRLAVQQAEAAYNIKASHPLFFYWMQDPVAETMSYKASGLSHALMAVF
Ga0187757_1113627	Ga0187757_11136271	F097378	NGAKGGATKYLTLQYLNYARWTAQQHSCSMIEALRIMGRTHLISVDGTWTPLGFAKYWRPAVTLLNETVHWGMKVPAAMLLFQQFRDLGFGPHGGLFTAVALSTAGEVAATGWSERFGVHMGLQQQISSYRESFSISRQARQGILAGAWAGAAGLWVRNFSWNFAFFEWKRFLHNAVDNSPANAPAWFEAHLNWLRSLEKKNQANVLTFEAATLGTYLTFFNMAGDNVKTKMQVDPARYPSFSLTVRDIWHKHGLLGFTRGSLFKGIYLILGSTLAIGIQERLTEIMAALFR
Ga0187757_1118200	Ga0187757_11182001	F083686	PVLLKFYHAIPYYYPLPKKSLRAMASLHAQQFEILVACTCNCFSSVGMLLFNKLAVQALPLECSLVWLQLFFAAFFMLIFGFPYLHIGSMKDFLRWCMVVPFFSGMLMTSILALKKAPMSLVIVLRSASPLSSLIFERFYPEPLRISGSMICAIVVMVAGAVMYVSQLHAEHWEGIGWVMLNSIVAVCDRLLQRLLLSKDQHPVDISKTGITVINNLMGLIPVGMAAYFTGEVGQLPYAYATLTGLDKVYIGLSCVIGLSIGFTGIWAQSLISATSFLVMVNANKFVIIGIEAFGMHTKVLSHGQILGACLSILGGILYGKARSQIEQEEEERKQLLPSVKV

Showing 1 to 29 of 29 entries

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300030698: Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium under thermal stress from Pennsylvania, USA - 33_T1F_2612EL1 (Eukaryote Community Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences