Basic Information | |
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IMG/M Taxon OID | 3300030658 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0128996 | Gp0213252 | Ga0187760 |
Sample Name | Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium under thermal stress from Pennsylvania, USA - 36_T1F_3212EL1 (Eukaryote Community Metatranscriptome) |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 84846990 |
Sequencing Scaffolds | 34 |
Novel Protein Genes | 35 |
Associated Families | 30 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium | 15 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum | 5 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 7 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456 | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis | 1 |
All Organisms → Viruses → Predicted Viral | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales | 1 |
All Organisms → cellular organisms → Eukaryota | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Metatranscriptome Of Upside-down Jellyfish Cassiopea Xamachana Infected With Symbiotic Dinoflagellate Symbiodinium From Hawaii, Usa |
Type | Host-Associated |
Taxonomy | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Metatranscriptome Of Upside-down Jellyfish Cassiopea Xamachana Infected With Symbiotic Dinoflagellate Symbiodinium From Hawaii, Usa |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Unclassified |
Location Information | ||||||||
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Location | USA: Pennsylvania | |||||||
Coordinates | Lat. (o) | 40.7982 | Long. (o) | -77.8599 | Alt. (m) | N/A | Depth (m) | 0 |
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