3300029936: Activated sludge bacterial and viral communities from EBPR bioreactors in Queensland, Australia - SBR4-V92206

Overview

Basic Information

• IMG/M Taxon OID: 3300029936
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118585 | Gp0137268 | Ga0119925
• Sample Name: Activated sludge bacterial and viral communities from EBPR bioreactors in Queensland, Australia - SBR4-V92206
• Sequencing Status: Permanent Draft
• Sequencing Center: California Institute of Technology
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 31672081
• Sequencing Scaffolds: 5
• Novel Protein Genes: 5
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
Not Available	2
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Activated Sludge → Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Unclassified

Location Information

• Location: Australia: Queensland
• Coordinates
  • Lat. (^o): -27.49999
  • Long. (^o): 153.01209
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002371	Metagenome / Metatranscriptome	566	Y
F013948	Metagenome / Metatranscriptome	267	Y
F083890	Metagenome / Metatranscriptome	112	Y
F095570	Metagenome / Metatranscriptome	105	Y
F100051	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0119925_100279	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	9864
Ga0119925_103507	Not Available	1210
Ga0119925_104743	All Organisms → cellular organisms → Bacteria	968
Ga0119925_106564	Not Available	765
Ga0119925_107928	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	671

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0119925_100279	Ga0119925_10027912	F013948	MREKLKKIVAYIFRSWEDEPGHTHPRLKILPPFLLELLAYLIGLAILYQIGAYLWSII
Ga0119925_103507	Ga0119925_1035072	F002371	MKNKQETRGGTRKKAGAKPKYNEQTKTVAFRCPMSKVDELKLIVKSKLSEWSLK
Ga0119925_104743	Ga0119925_1047433	F100051	MLERLICAVFGHRYVVERVLNHGARKVGCTRCGKHWGMHDGTRSFVPWDGELEALYAPGGILAQASGDVPPNAKVSGAGTASAGLPG
Ga0119925_106564	Ga0119925_1065643	F083890	LTAAKTPAQRQAERKARELAAGRVQWKRWVHPDDVPALAEYADKLARKRARAEQKAG
Ga0119925_107928	Ga0119925_1079281	F095570	LYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDN