3300029931: Activated sludge bacterial and viral communities from EBPR bioreactors in Queensland, Australia - SBR4-V90308

Overview

Basic Information

• IMG/M Taxon OID: 3300029931
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118585 | Gp0137253 | Ga0119911
• Sample Name: Activated sludge bacterial and viral communities from EBPR bioreactors in Queensland, Australia - SBR4-V90308
• Sequencing Status: Permanent Draft
• Sequencing Center: California Institute of Technology
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 14218327
• Sequencing Scaffolds: 3
• Novel Protein Genes: 4
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Activated Sludge → Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Unclassified

Location Information

• Location: Australia: Queensland
• Coordinates
  • Lat. (^o): -27.49999
  • Long. (^o): 153.01209
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002371	Metagenome / Metatranscriptome	566	Y
F009328	Metagenome / Metatranscriptome	319	Y
F091594	Metagenome / Metatranscriptome	107	Y
F100051	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0119911_100310	Not Available	5422
Ga0119911_101582	Not Available	1430
Ga0119911_102762	All Organisms → cellular organisms → Bacteria	892

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0119911_100310	Ga0119911_1003106	F009328	MKKEGYWCVVCGRFLAADNAGVIVHDDVPHPETMTFNEEDVQQ
Ga0119911_100310	Ga0119911_1003107	F091594	MSEQAIKTFCLGNGEIGCDGCEQEKNWQTLNQMPNALRLAMQDTARRIDDTECILRGRLWRT
Ga0119911_101582	Ga0119911_1015822	F002371	MKKKKETRGGTRKNAGAKPKYNEETKTVAFRCPLSKVDELKLIVKSKLSEWSLK
Ga0119911_102762	Ga0119911_1027621	F100051	RLICAVFGHRYVVERVLNHGARKVGCTRCGKHWGMHDGTRSFVPWDGELEALYAPGGILAQASGDVPPNAQITGG