3300029191: Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI011686-142

Overview

Basic Information

• IMG/M Taxon OID: 3300029191
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0127425 | Gp0192959 | Ga0168694
• Sample Name: Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI011686-142
• Sequencing Status: Permanent Draft
• Sequencing Center: Beijing Genomics Institute (BGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 102659111
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Host-Associated Microbial Communities From Gut And Oral Samples Of Rheumatoid Arthritis Patients In China
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Host-Associated Microbial Communities From Gut And Oral Samples Of Rheumatoid Arthritis Patients In China

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal secretion

Location Information

• Location: China: Beijing, Peking Union Medical College
• Coordinates
  • Lat. (^o): 39.911947
  • Long. (^o): 116.4156125
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F067844	Metagenome	125	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0168694_120158	All Organisms → cellular organisms → Bacteria	619

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0168694_120158	Ga0168694_1201582	F067844	MNTLAAETASAWYLILNRKRQTLPIYISQLSSHLPRPLTMGTQQVSAGAAVITPQHRSYRVPQGSPQVFGGP