3300029148: Aquariaum water viral communities from Chicago, USA - Great Lakes - GLB1

Overview

Basic Information

• IMG/M Taxon OID: 3300029148
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0127413 | Gp0192421 | Ga0168035
• Sample Name: Aquariaum water viral communities from Chicago, USA - Great Lakes - GLB1
• Sequencing Status: Permanent Draft
• Sequencing Center: Michigan State University
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 8886791
• Sequencing Scaffolds: 2
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	1
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Aquariaum Water Viral Communities From Chicago, Usa
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Aquaculture → Unclassified → Unclassified → Aquarium Water → Aquariaum Water Viral Communities From Chicago, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): na → na → na

Location Information

• Location: USA: Chicago
• Coordinates
  • Lat. (^o): 41.87
  • Long. (^o): -87.61
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018726	Metagenome / Metatranscriptome	233	Y
F085808	Metagenome	111	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0168035_100934	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	1285
Ga0168035_105896	Not Available	638

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0168035_100934	Ga0168035_1009343	F018726	MLPDPVTIAAAAPTPALVFTTVKSDGYGSERVDTGGNGYTVIINHTRPKGGGDKHYVQMLQTVNATDPYSGLVKKQVASVSLTISRPSFGFTDAAMVALAKALTDFRDDSEVTTAKLLQFQS
Ga0168035_105896	Ga0168035_1058962	F085808	MAGENAALWEVQASAADGTEATATSTHTVLFNSTTKVISDGAYISDILVDFRRSAPENESVNTDNNEIQDMGIDGLDITIEGLIGNSNNDTSTNSINKLIKWLKDGNTTTLFTKGRFGLRLDNAPQWNVVPTSTYGYHIRDLKMQYLGEKKDTVKFTVRLSLGGDVASAI