3300029145: Aquariaum water viral communities from Chicago, USA - Stingray Touch - STA1

Overview

Basic Information

• IMG/M Taxon OID: 3300029145
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0127413 | Gp0192425 | Ga0168039
• Sample Name: Aquariaum water viral communities from Chicago, USA - Stingray Touch - STA1
• Sequencing Status: Permanent Draft
• Sequencing Center: Michigan State University
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 7373646
• Sequencing Scaffolds: 1
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Aquariaum Water Viral Communities From Chicago, Usa
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Aquaculture → Unclassified → Unclassified → Aquarium Water → Aquariaum Water Viral Communities From Chicago, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): na → na → na

Location Information

• Location: USA: Chicago
• Coordinates
  • Lat. (^o): 41.87
  • Long. (^o): -87.61
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006550	Metagenome / Metatranscriptome	370	N
F050009	Metagenome	146	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0168039_10642	All Organisms → Viruses → Predicted Viral	1747

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0168039_10324	Ga0168039_103249	F050009	KAMREPYLLFNFEDKLVKVADKITNFDNLKRYEIKNPDLLWIDKYGMWIIEVDGAVHDRKVEKTKKRNALFLKNHIKLIVVNLADIKELGHNIYEYIDSQILERIRE
Ga0168039_10642	Ga0168039_106421	F006550	MARIFNEKKADYKGMQLWLNPADESVYATERAPTHSFAEAGGYAIYDFKKHFANKEAGKDSMGSNQYMHDAFVDPEFKATAEDYIADIKAGGRQRTAALRSFTNSAVDIVNVWETVLGKQDRTYAGKNLAKEIAVPNLLISIDTATKFGGMTQLDEGQLGQLKELTYSRQNFEANKYGLKFVIHEEARLKNVHNVLQDSIQVASNKIEQKQSFDVIAAANSGLTAKAAVGVWDTFVASTDRSTNSPLIDLGIVKLLIEGSGVGGRMNRVGMHPLDFAKYMSNTFVRGVASTKPSEVTFEPGTRELPGFPEAGLVLDNTITQGEAYCVDTEKELLEKWAERDRDWE